data_3RJQ # _entry.id 3RJQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3RJQ RCSB RCSB065016 WWPDB D_1000065016 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3RJQ _pdbx_database_status.recvd_initial_deposition_date 2011-04-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chen, L.' 1 'McLellan, J.S.' 2 'Kwon, Y.D.' 3 'Schmidt, S.' 4 'Wu, X.' 5 'Zhou, T.' 6 'Yang, Y.' 7 'Zhang, B.' 8 'Forsman, A.' 9 'Weiss, R.A.' 10 'Verrips, T.' 11 'Mascola, J.' 12 'Kwong, P.D.' 13 # _citation.id primary _citation.title 'Crystal structure of anti-HIV A12 VHH of llama antibody in complex with C1086 gp120' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, L.' 1 ? primary 'McLellan, J.S.' 2 ? primary 'Kwon, Y.D.' 3 ? primary 'Schmidt, S.' 4 ? primary 'Wu, X.' 5 ? primary 'Zhou, T.' 6 ? primary 'Yang, Y.' 7 ? primary 'Zhang, B.' 8 ? primary 'Forsman, A.' 9 ? primary 'Weiss, R.A.' 10 ? primary 'Verrips, T.' 11 ? primary 'Mascola, J.' 12 ? primary 'Kwong, P.D.' 13 ? # _cell.entry_id 3RJQ _cell.length_a 66.600 _cell.length_b 66.600 _cell.length_c 266.920 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RJQ _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'C186 gp120' 42324.707 1 ? ? ? ? 2 polymer man 'Llama VHH A12' 15888.410 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 8 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DIATMYSMQLASCVTLTLVLLVNSVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEMVLANVTENFNMWKND MVEQMHEDIISLWDESLKPCVKLTGGSAITQACPKVSFDPIPLHYCAPAGFAILKCNNKTFNGTGPCRNVSTVQCTHGIK PVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNESVNIVCTRPNNGGSGSGGNIRQAHCNINESKWNNTLQKVGEE LAKHFPSKTIKFEPSSGGDLEITTHSFNCRGEFFYCNTSDLFNGTYRNGTYNHTGRSSNGTITLQCKIKQIINMWQEVGR AIYAPPIEGEITCNSNITGLLLLRDGGQSNETNDTETFRPGGGDMRDNWRSELYKYKVVEIK ; ;DIATMYSMQLASCVTLTLVLLVNSVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEMVLANVTENFNMWKND MVEQMHEDIISLWDESLKPCVKLTGGSAITQACPKVSFDPIPLHYCAPAGFAILKCNNKTFNGTGPCRNVSTVQCTHGIK PVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNESVNIVCTRPNNGGSGSGGNIRQAHCNINESKWNNTLQKVGEE LAKHFPSKTIKFEPSSGGDLEITTHSFNCRGEFFYCNTSDLFNGTYRNGTYNHTGRSSNGTITLQCKIKQIINMWQEVGR AIYAPPIEGEITCNSNITGLLLLRDGGQSNETNDTETFRPGGGDMRDNWRSELYKYKVVEIK ; A ? 2 'polypeptide(L)' no no ;AVQLQESGGGLVQAGGSLRLSCTASGRISSSYDMGWFRQAPGKEREFVAAISWSGGTTDYADSVKGRFAISKDNAKNAVY LQMNSLKPEDTAVYYCAAKWRPLRYSDYPSNSDYYDWGQGTQVTVSSEQKLISEEDLHHHHHH ; ;AVQLQESGGGLVQAGGSLRLSCTASGRISSSYDMGWFRQAPGKEREFVAAISWSGGTTDYADSVKGRFAISKDNAKNAVY LQMNSLKPEDTAVYYCAAKWRPLRYSDYPSNSDYYDWGQGTQVTVSSEQKLISEEDLHHHHHH ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ILE n 1 3 ALA n 1 4 THR n 1 5 MET n 1 6 TYR n 1 7 SER n 1 8 MET n 1 9 GLN n 1 10 LEU n 1 11 ALA n 1 12 SER n 1 13 CYS n 1 14 VAL n 1 15 THR n 1 16 LEU n 1 17 THR n 1 18 LEU n 1 19 VAL n 1 20 LEU n 1 21 LEU n 1 22 VAL n 1 23 ASN n 1 24 SER n 1 25 VAL n 1 26 TRP n 1 27 LYS n 1 28 GLU n 1 29 ALA n 1 30 LYS n 1 31 THR n 1 32 THR n 1 33 LEU n 1 34 PHE n 1 35 CYS n 1 36 ALA n 1 37 SER n 1 38 ASP n 1 39 ALA n 1 40 LYS n 1 41 ALA n 1 42 TYR n 1 43 GLU n 1 44 LYS n 1 45 GLU n 1 46 VAL n 1 47 HIS n 1 48 ASN n 1 49 VAL n 1 50 TRP n 1 51 ALA n 1 52 THR n 1 53 HIS n 1 54 ALA n 1 55 CYS n 1 56 VAL n 1 57 PRO n 1 58 THR n 1 59 ASP n 1 60 PRO n 1 61 ASN n 1 62 PRO n 1 63 GLN n 1 64 GLU n 1 65 MET n 1 66 VAL n 1 67 LEU n 1 68 ALA n 1 69 ASN n 1 70 VAL n 1 71 THR n 1 72 GLU n 1 73 ASN n 1 74 PHE n 1 75 ASN n 1 76 MET n 1 77 TRP n 1 78 LYS n 1 79 ASN n 1 80 ASP n 1 81 MET n 1 82 VAL n 1 83 GLU n 1 84 GLN n 1 85 MET n 1 86 HIS n 1 87 GLU n 1 88 ASP n 1 89 ILE n 1 90 ILE n 1 91 SER n 1 92 LEU n 1 93 TRP n 1 94 ASP n 1 95 GLU n 1 96 SER n 1 97 LEU n 1 98 LYS n 1 99 PRO n 1 100 CYS n 1 101 VAL n 1 102 LYS n 1 103 LEU n 1 104 THR n 1 105 GLY n 1 106 GLY n 1 107 SER n 1 108 ALA n 1 109 ILE n 1 110 THR n 1 111 GLN n 1 112 ALA n 1 113 CYS n 1 114 PRO n 1 115 LYS n 1 116 VAL n 1 117 SER n 1 118 PHE n 1 119 ASP n 1 120 PRO n 1 121 ILE n 1 122 PRO n 1 123 LEU n 1 124 HIS n 1 125 TYR n 1 126 CYS n 1 127 ALA n 1 128 PRO n 1 129 ALA n 1 130 GLY n 1 131 PHE n 1 132 ALA n 1 133 ILE n 1 134 LEU n 1 135 LYS n 1 136 CYS n 1 137 ASN n 1 138 ASN n 1 139 LYS n 1 140 THR n 1 141 PHE n 1 142 ASN n 1 143 GLY n 1 144 THR n 1 145 GLY n 1 146 PRO n 1 147 CYS n 1 148 ARG n 1 149 ASN n 1 150 VAL n 1 151 SER n 1 152 THR n 1 153 VAL n 1 154 GLN n 1 155 CYS n 1 156 THR n 1 157 HIS n 1 158 GLY n 1 159 ILE n 1 160 LYS n 1 161 PRO n 1 162 VAL n 1 163 VAL n 1 164 SER n 1 165 THR n 1 166 GLN n 1 167 LEU n 1 168 LEU n 1 169 LEU n 1 170 ASN n 1 171 GLY n 1 172 SER n 1 173 LEU n 1 174 ALA n 1 175 GLU n 1 176 GLU n 1 177 GLU n 1 178 ILE n 1 179 ILE n 1 180 ILE n 1 181 ARG n 1 182 SER n 1 183 GLU n 1 184 ASN n 1 185 LEU n 1 186 THR n 1 187 ASN n 1 188 ASN n 1 189 ALA n 1 190 LYS n 1 191 THR n 1 192 ILE n 1 193 ILE n 1 194 VAL n 1 195 HIS n 1 196 LEU n 1 197 ASN n 1 198 GLU n 1 199 SER n 1 200 VAL n 1 201 ASN n 1 202 ILE n 1 203 VAL n 1 204 CYS n 1 205 THR n 1 206 ARG n 1 207 PRO n 1 208 ASN n 1 209 ASN n 1 210 GLY n 1 211 GLY n 1 212 SER n 1 213 GLY n 1 214 SER n 1 215 GLY n 1 216 GLY n 1 217 ASN n 1 218 ILE n 1 219 ARG n 1 220 GLN n 1 221 ALA n 1 222 HIS n 1 223 CYS n 1 224 ASN n 1 225 ILE n 1 226 ASN n 1 227 GLU n 1 228 SER n 1 229 LYS n 1 230 TRP n 1 231 ASN n 1 232 ASN n 1 233 THR n 1 234 LEU n 1 235 GLN n 1 236 LYS n 1 237 VAL n 1 238 GLY n 1 239 GLU n 1 240 GLU n 1 241 LEU n 1 242 ALA n 1 243 LYS n 1 244 HIS n 1 245 PHE n 1 246 PRO n 1 247 SER n 1 248 LYS n 1 249 THR n 1 250 ILE n 1 251 LYS n 1 252 PHE n 1 253 GLU n 1 254 PRO n 1 255 SER n 1 256 SER n 1 257 GLY n 1 258 GLY n 1 259 ASP n 1 260 LEU n 1 261 GLU n 1 262 ILE n 1 263 THR n 1 264 THR n 1 265 HIS n 1 266 SER n 1 267 PHE n 1 268 ASN n 1 269 CYS n 1 270 ARG n 1 271 GLY n 1 272 GLU n 1 273 PHE n 1 274 PHE n 1 275 TYR n 1 276 CYS n 1 277 ASN n 1 278 THR n 1 279 SER n 1 280 ASP n 1 281 LEU n 1 282 PHE n 1 283 ASN n 1 284 GLY n 1 285 THR n 1 286 TYR n 1 287 ARG n 1 288 ASN n 1 289 GLY n 1 290 THR n 1 291 TYR n 1 292 ASN n 1 293 HIS n 1 294 THR n 1 295 GLY n 1 296 ARG n 1 297 SER n 1 298 SER n 1 299 ASN n 1 300 GLY n 1 301 THR n 1 302 ILE n 1 303 THR n 1 304 LEU n 1 305 GLN n 1 306 CYS n 1 307 LYS n 1 308 ILE n 1 309 LYS n 1 310 GLN n 1 311 ILE n 1 312 ILE n 1 313 ASN n 1 314 MET n 1 315 TRP n 1 316 GLN n 1 317 GLU n 1 318 VAL n 1 319 GLY n 1 320 ARG n 1 321 ALA n 1 322 ILE n 1 323 TYR n 1 324 ALA n 1 325 PRO n 1 326 PRO n 1 327 ILE n 1 328 GLU n 1 329 GLY n 1 330 GLU n 1 331 ILE n 1 332 THR n 1 333 CYS n 1 334 ASN n 1 335 SER n 1 336 ASN n 1 337 ILE n 1 338 THR n 1 339 GLY n 1 340 LEU n 1 341 LEU n 1 342 LEU n 1 343 LEU n 1 344 ARG n 1 345 ASP n 1 346 GLY n 1 347 GLY n 1 348 GLN n 1 349 SER n 1 350 ASN n 1 351 GLU n 1 352 THR n 1 353 ASN n 1 354 ASP n 1 355 THR n 1 356 GLU n 1 357 THR n 1 358 PHE n 1 359 ARG n 1 360 PRO n 1 361 GLY n 1 362 GLY n 1 363 GLY n 1 364 ASP n 1 365 MET n 1 366 ARG n 1 367 ASP n 1 368 ASN n 1 369 TRP n 1 370 ARG n 1 371 SER n 1 372 GLU n 1 373 LEU n 1 374 TYR n 1 375 LYS n 1 376 TYR n 1 377 LYS n 1 378 VAL n 1 379 VAL n 1 380 GLU n 1 381 ILE n 1 382 LYS n 2 1 ALA n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 GLN n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 LEU n 2 12 VAL n 2 13 GLN n 2 14 ALA n 2 15 GLY n 2 16 GLY n 2 17 SER n 2 18 LEU n 2 19 ARG n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 THR n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 ARG n 2 28 ILE n 2 29 SER n 2 30 SER n 2 31 SER n 2 32 TYR n 2 33 ASP n 2 34 MET n 2 35 GLY n 2 36 TRP n 2 37 PHE n 2 38 ARG n 2 39 GLN n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 LYS n 2 44 GLU n 2 45 ARG n 2 46 GLU n 2 47 PHE n 2 48 VAL n 2 49 ALA n 2 50 ALA n 2 51 ILE n 2 52 SER n 2 53 TRP n 2 54 SER n 2 55 GLY n 2 56 GLY n 2 57 THR n 2 58 THR n 2 59 ASP n 2 60 TYR n 2 61 ALA n 2 62 ASP n 2 63 SER n 2 64 VAL n 2 65 LYS n 2 66 GLY n 2 67 ARG n 2 68 PHE n 2 69 ALA n 2 70 ILE n 2 71 SER n 2 72 LYS n 2 73 ASP n 2 74 ASN n 2 75 ALA n 2 76 LYS n 2 77 ASN n 2 78 ALA n 2 79 VAL n 2 80 TYR n 2 81 LEU n 2 82 GLN n 2 83 MET n 2 84 ASN n 2 85 SER n 2 86 LEU n 2 87 LYS n 2 88 PRO n 2 89 GLU n 2 90 ASP n 2 91 THR n 2 92 ALA n 2 93 VAL n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 ALA n 2 98 ALA n 2 99 LYS n 2 100 TRP n 2 101 ARG n 2 102 PRO n 2 103 LEU n 2 104 ARG n 2 105 TYR n 2 106 SER n 2 107 ASP n 2 108 TYR n 2 109 PRO n 2 110 SER n 2 111 ASN n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 TYR n 2 116 ASP n 2 117 TRP n 2 118 GLY n 2 119 GLN n 2 120 GLY n 2 121 THR n 2 122 GLN n 2 123 VAL n 2 124 THR n 2 125 VAL n 2 126 SER n 2 127 SER n 2 128 GLU n 2 129 GLN n 2 130 LYS n 2 131 LEU n 2 132 ILE n 2 133 SER n 2 134 GLU n 2 135 GLU n 2 136 ASP n 2 137 LEU n 2 138 HIS n 2 139 HIS n 2 140 HIS n 2 141 HIS n 2 142 HIS n 2 143 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'Human immunodeficiency virus type 1' 11706 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'Lama glama' 9844 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 PDB 3RJQ 3RJQ 1 ;DIATMYSMQLASCVTLTLVLLVNSVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEMVLANVTENFNMWKND MVEQMHEDIISLWDESLKPCVKLTGGSAITQACPKVSFDPIPLHYCAPAGFAILKCNNKTFNGTGPCRNVSTVQCTHGIK PVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNESVNIVCTRPNNGGSGSGGNIRQAHCNINESKWNNTLQKVGEE LAKHFPSKTIKFEPSSGGDLEITTHSFNCRGEFFYCNTSDLFNGTYRNGTYNHTGRSSNGTITLQCKIKQIINMWQEVGR AIYAPPIEGEITCNSNITGLLLLRDGGQSNETNDTETFRPGGGDMRDNWRSELYKYKVVEIK ; ? ? 2 PDB 3RJQ 3RJQ 2 ;AVQLQESGGGLVQAGGSLRLSCTASGRISSSYDMGWFRQAPGKEREFVAAISWSGGTTDYADSVKGRFAISKDNAKNAVY LQMNSLKPEDTAVYYCAAKWRPLRYSDYPSNSDYYDWGQGTQVTVSSEQKLISEEDLHHHHHH ; ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3RJQ A 1 ? 382 ? 3RJQ 20 ? 492 ? 20 492 2 2 3RJQ B 1 ? 143 ? 3RJQ 1 ? 129 ? 1 129 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3RJQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_percent_sol 51.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pdbx_details '50 mM of KH2PO4, 24.2% PEG 8000, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-04-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 # _reflns.entry_id 3RJQ _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.601 _reflns.number_obs 13406 _reflns.number_all ? _reflns.percent_possible_obs 68.2 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3RJQ _refine.ls_number_reflns_obs 13402 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.473 _refine.ls_d_res_high 2.601 _refine.ls_percent_reflns_obs 68.98 _refine.ls_R_factor_obs 0.2572 _refine.ls_R_factor_all 0.26 _refine.ls_R_factor_R_work 0.2551 _refine.ls_R_factor_R_free 0.2988 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.92 _refine.ls_number_reflns_R_free 659 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -33.1835 _refine.aniso_B[2][2] -33.1835 _refine.aniso_B[3][3] -15.7071 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.263 _refine.solvent_model_param_bsol 68.266 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.95 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.37 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3278 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 112 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3390 _refine_hist.d_res_high 2.601 _refine_hist.d_res_low 23.473 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.004 ? ? 3470 ? 'X-RAY DIFFRACTION' f_angle_d 0.883 ? ? 4698 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 15.461 ? ? 1264 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.055 ? ? 529 ? 'X-RAY DIFFRACTION' f_plane_restr 0.003 ? ? 593 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.601 2.8014 380 0.3566 11.00 0.5101 . . 22 . . . . 'X-RAY DIFFRACTION' . 2.8014 3.0827 1490 0.3476 42.00 0.3464 . . 87 . . . . 'X-RAY DIFFRACTION' . 3.0827 3.5275 3335 0.3115 91.00 0.3605 . . 180 . . . . 'X-RAY DIFFRACTION' . 3.5275 4.4394 3675 0.2504 99.00 0.2788 . . 179 . . . . 'X-RAY DIFFRACTION' . 4.4394 23.4735 3863 0.2203 98.00 0.2735 . . 191 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3RJQ _struct.title 'Crystal structure of anti-HIV llama VHH antibody A12 in complex with C186 gp120' _struct.pdbx_descriptor 'C186 gp120, Llama VHH A12' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RJQ _struct_keywords.pdbx_keywords 'Viral Protein/Immune system' _struct_keywords.text 'Ig VH domain, anti-HIV, Viral Protein-Immune system complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 45 ? CYS A 55 ? GLU A 64 CYS A 74 1 ? 11 HELX_P HELX_P2 2 ASN A 79 ? LEU A 97 ? ASN A 98 LEU A 116 1 ? 19 HELX_P HELX_P3 3 ASN A 226 ? PHE A 245 ? ASN A 334 PHE A 353 1 ? 20 HELX_P HELX_P4 4 ASP A 259 ? THR A 264 ? ASP A 368 THR A 373 1 ? 6 HELX_P HELX_P5 5 MET A 365 ? SER A 371 ? MET A 475 SER A 481 1 ? 7 HELX_P HELX_P6 6 LYS B 87 ? THR B 91 ? LYS B 83 THR B 87 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 35 SG ? ? ? 1_555 A CYS 55 SG ? ? A CYS 54 A CYS 74 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf2 disulf ? ? A CYS 126 SG ? ? ? 1_555 A CYS 155 SG ? ? A CYS 218 A CYS 247 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf3 disulf ? ? A CYS 136 SG ? ? ? 1_555 A CYS 147 SG ? ? A CYS 228 A CYS 239 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf4 disulf ? ? A CYS 204 SG ? ? ? 1_555 A CYS 223 SG ? ? A CYS 296 A CYS 331 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf5 disulf ? ? A CYS 269 SG ? ? ? 1_555 A CYS 333 SG ? ? A CYS 378 A CYS 445 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf6 disulf ? ? A CYS 276 SG ? ? ? 1_555 A CYS 306 SG ? ? A CYS 385 A CYS 418 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf7 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? B CYS 22 B CYS 92 1_555 ? ? ? ? ? ? ? 2.033 ? ? covale1 covale one ? A ASN 142 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 234 A NAG 734 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale2 covale one ? A ASN 149 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 241 A NAG 741 1_555 ? ? ? ? ? ? ? 1.483 ? N-Glycosylation covale3 covale one ? A ASN 170 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 262 A NAG 762 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale4 covale one ? A ASN 184 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 276 A NAG 776 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale5 covale one ? A ASN 197 ND2 ? ? ? 1_555 G NAG . C1 ? ? A ASN 289 A NAG 789 1_555 ? ? ? ? ? ? ? 1.439 ? N-Glycosylation covale6 covale one ? A ASN 277 ND2 ? ? ? 1_555 H NAG . C1 ? ? A ASN 386 A NAG 886 1_555 ? ? ? ? ? ? ? 1.438 ? N-Glycosylation covale7 covale one ? A ASN 288 ND2 ? ? ? 1_555 J NAG . C1 ? ? A ASN 397 A NAG 897 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 62 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 81 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLN _struct_mon_prot_cis.pdbx_label_seq_id_2 63 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLN _struct_mon_prot_cis.pdbx_auth_seq_id_2 82 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -16.45 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 2 ? D ? 4 ? E ? 3 ? F ? 4 ? G ? 3 ? H ? 4 ? I ? 6 ? J ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel I 1 2 ? parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel I 4 5 ? anti-parallel I 5 6 ? anti-parallel J 1 2 ? parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 27 ? GLU A 28 ? LYS A 46 GLU A 47 A 2 TYR A 376 ? GLU A 380 ? TYR A 486 GLU A 490 A 3 PHE A 131 ? CYS A 136 ? PHE A 223 CYS A 228 A 4 VAL A 150 ? VAL A 153 ? VAL A 242 VAL A 245 A 5 MET A 65 ? VAL A 66 ? MET A 84 VAL A 85 B 1 VAL A 56 ? PRO A 57 ? VAL A 75 PRO A 76 B 2 PHE A 34 ? SER A 37 ? PHE A 53 SER A 56 B 3 HIS A 124 ? CYS A 126 ? HIS A 216 CYS A 218 C 1 GLU A 72 ? ASN A 75 ? GLU A 91 ASN A 94 C 2 THR A 144 ? CYS A 147 ? THR A 236 CYS A 239 D 1 LEU A 167 ? LEU A 169 ? LEU A 259 LEU A 261 D 2 CYS A 333 ? ARG A 344 ? CYS A 445 ARG A 456 D 3 ILE A 192 ? CYS A 204 ? ILE A 284 CYS A 296 D 4 ILE A 179 ? ARG A 181 ? ILE A 271 ARG A 273 E 1 LEU A 167 ? LEU A 169 ? LEU A 259 LEU A 261 E 2 CYS A 333 ? ARG A 344 ? CYS A 445 ARG A 456 E 3 PHE A 358 ? PRO A 360 ? PHE A 468 PRO A 470 F 1 HIS A 222 ? ILE A 225 ? HIS A 330 ILE A 333 F 2 ILE A 302 ? LYS A 307 ? ILE A 414 LYS A 419 F 3 GLU A 272 ? CYS A 276 ? GLU A 381 CYS A 385 F 4 HIS A 265 ? CYS A 269 ? HIS A 374 CYS A 378 G 1 ILE A 250 ? LYS A 251 ? ILE A 359 LYS A 360 G 2 GLY A 284 ? TYR A 286 ? GLY A 393 TYR A 395 G 3 TYR A 291 ? ASN A 292 ? TYR A 400 ASN A 401 H 1 LEU B 4 ? SER B 7 ? LEU B 4 SER B 7 H 2 LEU B 18 ? ALA B 24 ? LEU B 18 ALA B 24 H 3 ALA B 78 ? MET B 83 ? ALA B 77 MET B 82 H 4 PHE B 68 ? ASP B 73 ? PHE B 67 ASP B 72 I 1 GLY B 10 ? GLN B 13 ? GLY B 10 GLN B 13 I 2 THR B 121 ? SER B 126 ? THR B 107 SER B 112 I 3 ALA B 92 ? TRP B 100 ? ALA B 88 TRP B 96 I 4 TYR B 32 ? GLN B 39 ? TYR B 32 GLN B 39 I 5 ARG B 45 ? SER B 52 ? ARG B 45 SER B 52 I 6 THR B 58 ? TYR B 60 ? THR B 57 TYR B 59 J 1 GLY B 10 ? GLN B 13 ? GLY B 10 GLN B 13 J 2 THR B 121 ? SER B 126 ? THR B 107 SER B 112 J 3 ALA B 92 ? TRP B 100 ? ALA B 88 TRP B 96 J 4 ASP B 116 ? TRP B 117 ? ASP B 102 TRP B 103 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 27 ? N LYS A 46 O GLU A 380 ? O GLU A 490 A 2 3 O VAL A 379 ? O VAL A 489 N ALA A 132 ? N ALA A 224 A 3 4 N ILE A 133 ? N ILE A 225 O VAL A 153 ? O VAL A 245 A 4 5 O THR A 152 ? O THR A 244 N MET A 65 ? N MET A 84 B 1 2 O VAL A 56 ? O VAL A 75 N CYS A 35 ? N CYS A 54 B 2 3 N PHE A 34 ? N PHE A 53 O CYS A 126 ? O CYS A 218 C 1 2 N PHE A 74 ? N PHE A 93 O GLY A 145 ? O GLY A 237 D 1 2 N LEU A 168 ? N LEU A 260 O THR A 338 ? O THR A 450 D 2 3 O ILE A 337 ? O ILE A 449 N VAL A 200 ? N VAL A 292 D 3 4 O HIS A 195 ? O HIS A 287 N ILE A 179 ? N ILE A 271 E 1 2 N LEU A 168 ? N LEU A 260 O THR A 338 ? O THR A 450 E 2 3 N LEU A 343 ? N LEU A 455 O ARG A 359 ? O ARG A 469 F 1 2 N ILE A 225 ? N ILE A 333 O ILE A 302 ? O ILE A 414 F 2 3 O LYS A 307 ? O LYS A 419 N TYR A 275 ? N TYR A 384 F 3 4 O CYS A 276 ? O CYS A 385 N HIS A 265 ? N HIS A 374 G 1 2 N ILE A 250 ? N ILE A 359 O TYR A 286 ? O TYR A 395 G 2 3 N THR A 285 ? N THR A 394 O TYR A 291 ? O TYR A 400 H 1 2 N SER B 7 ? N SER B 7 O SER B 21 ? O SER B 21 H 2 3 N LEU B 18 ? N LEU B 18 O MET B 83 ? O MET B 82 H 3 4 O TYR B 80 ? O TYR B 79 N SER B 71 ? N SER B 70 I 1 2 N GLY B 10 ? N GLY B 10 O THR B 124 ? O THR B 110 I 2 3 O THR B 121 ? O THR B 107 N TYR B 94 ? N TYR B 90 I 3 4 O TYR B 95 ? O TYR B 91 N PHE B 37 ? N PHE B 37 I 4 5 N TRP B 36 ? N TRP B 36 O ALA B 49 ? O ALA B 49 I 5 6 N ALA B 50 ? N ALA B 50 O ASP B 59 ? O ASP B 58 J 1 2 N GLY B 10 ? N GLY B 10 O THR B 124 ? O THR B 110 J 2 3 O THR B 121 ? O THR B 107 N TYR B 94 ? N TYR B 90 J 3 4 N ALA B 98 ? N ALA B 94 O ASP B 116 ? O ASP B 102 # _database_PDB_matrix.entry_id 3RJQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3RJQ _atom_sites.fract_transf_matrix[1][1] 0.015015 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015015 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003746 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'NAG A 734 HAS WRONG CHIRALITY AT ATOM C1' 2 'NAG A 897 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 20 ? ? ? A . n A 1 2 ILE 2 21 ? ? ? A . n A 1 3 ALA 3 22 ? ? ? A . n A 1 4 THR 4 23 ? ? ? A . n A 1 5 MET 5 24 ? ? ? A . n A 1 6 TYR 6 25 ? ? ? A . n A 1 7 SER 7 26 ? ? ? A . n A 1 8 MET 8 27 ? ? ? A . n A 1 9 GLN 9 28 ? ? ? A . n A 1 10 LEU 10 29 ? ? ? A . n A 1 11 ALA 11 30 ? ? ? A . n A 1 12 SER 12 31 ? ? ? A . n A 1 13 CYS 13 32 ? ? ? A . n A 1 14 VAL 14 33 ? ? ? A . n A 1 15 THR 15 34 ? ? ? A . n A 1 16 LEU 16 35 ? ? ? A . n A 1 17 THR 17 36 ? ? ? A . n A 1 18 LEU 18 37 ? ? ? A . n A 1 19 VAL 19 38 ? ? ? A . n A 1 20 LEU 20 39 ? ? ? A . n A 1 21 LEU 21 40 ? ? ? A . n A 1 22 VAL 22 41 ? ? ? A . n A 1 23 ASN 23 42 ? ? ? A . n A 1 24 SER 24 43 ? ? ? A . n A 1 25 VAL 25 44 ? ? ? A . n A 1 26 TRP 26 45 45 TRP TRP A . n A 1 27 LYS 27 46 46 LYS LYS A . n A 1 28 GLU 28 47 47 GLU GLU A . n A 1 29 ALA 29 48 48 ALA ALA A . n A 1 30 LYS 30 49 49 LYS LYS A . n A 1 31 THR 31 50 50 THR THR A . n A 1 32 THR 32 51 51 THR THR A . n A 1 33 LEU 33 52 52 LEU LEU A . n A 1 34 PHE 34 53 53 PHE PHE A . n A 1 35 CYS 35 54 54 CYS CYS A . n A 1 36 ALA 36 55 55 ALA ALA A . n A 1 37 SER 37 56 56 SER SER A . n A 1 38 ASP 38 57 57 ASP ASP A . n A 1 39 ALA 39 58 58 ALA ALA A . n A 1 40 LYS 40 59 59 LYS LYS A . n A 1 41 ALA 41 60 60 ALA ALA A . n A 1 42 TYR 42 61 61 TYR TYR A . n A 1 43 GLU 43 62 62 GLU GLU A . n A 1 44 LYS 44 63 63 LYS LYS A . n A 1 45 GLU 45 64 64 GLU GLU A . n A 1 46 VAL 46 65 65 VAL VAL A . n A 1 47 HIS 47 66 66 HIS HIS A . n A 1 48 ASN 48 67 67 ASN ASN A . n A 1 49 VAL 49 68 68 VAL VAL A . n A 1 50 TRP 50 69 69 TRP TRP A . n A 1 51 ALA 51 70 70 ALA ALA A . n A 1 52 THR 52 71 71 THR THR A . n A 1 53 HIS 53 72 72 HIS HIS A . n A 1 54 ALA 54 73 73 ALA ALA A . n A 1 55 CYS 55 74 74 CYS CYS A . n A 1 56 VAL 56 75 75 VAL VAL A . n A 1 57 PRO 57 76 76 PRO PRO A . n A 1 58 THR 58 77 77 THR THR A . n A 1 59 ASP 59 78 78 ASP ASP A . n A 1 60 PRO 60 79 79 PRO PRO A . n A 1 61 ASN 61 80 80 ASN ASN A . n A 1 62 PRO 62 81 81 PRO PRO A . n A 1 63 GLN 63 82 82 GLN GLN A . n A 1 64 GLU 64 83 83 GLU GLU A . n A 1 65 MET 65 84 84 MET MET A . n A 1 66 VAL 66 85 85 VAL VAL A . n A 1 67 LEU 67 86 86 LEU LEU A . n A 1 68 ALA 68 87 87 ALA ALA A . n A 1 69 ASN 69 88 88 ASN ASN A . n A 1 70 VAL 70 89 89 VAL VAL A . n A 1 71 THR 71 90 90 THR THR A . n A 1 72 GLU 72 91 91 GLU GLU A . n A 1 73 ASN 73 92 92 ASN ASN A . n A 1 74 PHE 74 93 93 PHE PHE A . n A 1 75 ASN 75 94 94 ASN ASN A . n A 1 76 MET 76 95 95 MET MET A . n A 1 77 TRP 77 96 96 TRP TRP A . n A 1 78 LYS 78 97 97 LYS LYS A . n A 1 79 ASN 79 98 98 ASN ASN A . n A 1 80 ASP 80 99 99 ASP ASP A . n A 1 81 MET 81 100 100 MET MET A . n A 1 82 VAL 82 101 101 VAL VAL A . n A 1 83 GLU 83 102 102 GLU GLU A . n A 1 84 GLN 84 103 103 GLN GLN A . n A 1 85 MET 85 104 104 MET MET A . n A 1 86 HIS 86 105 105 HIS HIS A . n A 1 87 GLU 87 106 106 GLU GLU A . n A 1 88 ASP 88 107 107 ASP ASP A . n A 1 89 ILE 89 108 108 ILE ILE A . n A 1 90 ILE 90 109 109 ILE ILE A . n A 1 91 SER 91 110 110 SER SER A . n A 1 92 LEU 92 111 111 LEU LEU A . n A 1 93 TRP 93 112 112 TRP TRP A . n A 1 94 ASP 94 113 113 ASP ASP A . n A 1 95 GLU 95 114 114 GLU GLU A . n A 1 96 SER 96 115 115 SER SER A . n A 1 97 LEU 97 116 116 LEU LEU A . n A 1 98 LYS 98 117 117 LYS LYS A . n A 1 99 PRO 99 191 ? ? ? A . n A 1 100 CYS 100 192 ? ? ? A . n A 1 101 VAL 101 193 ? ? ? A . n A 1 102 LYS 102 194 ? ? ? A . n A 1 103 LEU 103 195 ? ? ? A . n A 1 104 THR 104 196 ? ? ? A . n A 1 105 GLY 105 197 ? ? ? A . n A 1 106 GLY 106 198 ? ? ? A . n A 1 107 SER 107 199 ? ? ? A . n A 1 108 ALA 108 200 ? ? ? A . n A 1 109 ILE 109 201 ? ? ? A . n A 1 110 THR 110 202 ? ? ? A . n A 1 111 GLN 111 203 ? ? ? A . n A 1 112 ALA 112 204 ? ? ? A . n A 1 113 CYS 113 205 ? ? ? A . n A 1 114 PRO 114 206 ? ? ? A . n A 1 115 LYS 115 207 ? ? ? A . n A 1 116 VAL 116 208 208 VAL VAL A . n A 1 117 SER 117 209 209 SER SER A . n A 1 118 PHE 118 210 210 PHE PHE A . n A 1 119 ASP 119 211 211 ASP ASP A . n A 1 120 PRO 120 212 212 PRO PRO A . n A 1 121 ILE 121 213 213 ILE ILE A . n A 1 122 PRO 122 214 214 PRO PRO A . n A 1 123 LEU 123 215 215 LEU LEU A . n A 1 124 HIS 124 216 216 HIS HIS A . n A 1 125 TYR 125 217 217 TYR TYR A . n A 1 126 CYS 126 218 218 CYS CYS A . n A 1 127 ALA 127 219 219 ALA ALA A . n A 1 128 PRO 128 220 220 PRO PRO A . n A 1 129 ALA 129 221 221 ALA ALA A . n A 1 130 GLY 130 222 222 GLY GLY A . n A 1 131 PHE 131 223 223 PHE PHE A . n A 1 132 ALA 132 224 224 ALA ALA A . n A 1 133 ILE 133 225 225 ILE ILE A . n A 1 134 LEU 134 226 226 LEU LEU A . n A 1 135 LYS 135 227 227 LYS LYS A . n A 1 136 CYS 136 228 228 CYS CYS A . n A 1 137 ASN 137 229 229 ASN ASN A . n A 1 138 ASN 138 230 230 ASN ASN A . n A 1 139 LYS 139 231 231 LYS LYS A . n A 1 140 THR 140 232 232 THR THR A . n A 1 141 PHE 141 233 233 PHE PHE A . n A 1 142 ASN 142 234 234 ASN ASN A . n A 1 143 GLY 143 235 235 GLY GLY A . n A 1 144 THR 144 236 236 THR THR A . n A 1 145 GLY 145 237 237 GLY GLY A . n A 1 146 PRO 146 238 238 PRO PRO A . n A 1 147 CYS 147 239 239 CYS CYS A . n A 1 148 ARG 148 240 240 ARG ARG A . n A 1 149 ASN 149 241 241 ASN ASN A . n A 1 150 VAL 150 242 242 VAL VAL A . n A 1 151 SER 151 243 243 SER SER A . n A 1 152 THR 152 244 244 THR THR A . n A 1 153 VAL 153 245 245 VAL VAL A . n A 1 154 GLN 154 246 246 GLN GLN A . n A 1 155 CYS 155 247 247 CYS CYS A . n A 1 156 THR 156 248 248 THR THR A . n A 1 157 HIS 157 249 249 HIS HIS A . n A 1 158 GLY 158 250 250 GLY GLY A . n A 1 159 ILE 159 251 251 ILE ILE A . n A 1 160 LYS 160 252 252 LYS LYS A . n A 1 161 PRO 161 253 253 PRO PRO A . n A 1 162 VAL 162 254 254 VAL VAL A . n A 1 163 VAL 163 255 255 VAL VAL A . n A 1 164 SER 164 256 256 SER SER A . n A 1 165 THR 165 257 257 THR THR A . n A 1 166 GLN 166 258 258 GLN GLN A . n A 1 167 LEU 167 259 259 LEU LEU A . n A 1 168 LEU 168 260 260 LEU LEU A . n A 1 169 LEU 169 261 261 LEU LEU A . n A 1 170 ASN 170 262 262 ASN ASN A . n A 1 171 GLY 171 263 263 GLY GLY A . n A 1 172 SER 172 264 264 SER SER A . n A 1 173 LEU 173 265 265 LEU LEU A . n A 1 174 ALA 174 266 266 ALA ALA A . n A 1 175 GLU 175 267 267 GLU GLU A . n A 1 176 GLU 176 268 268 GLU GLU A . n A 1 177 GLU 177 269 269 GLU GLU A . n A 1 178 ILE 178 270 270 ILE ILE A . n A 1 179 ILE 179 271 271 ILE ILE A . n A 1 180 ILE 180 272 272 ILE ILE A . n A 1 181 ARG 181 273 273 ARG ARG A . n A 1 182 SER 182 274 274 SER SER A . n A 1 183 GLU 183 275 275 GLU GLU A . n A 1 184 ASN 184 276 276 ASN ASN A . n A 1 185 LEU 185 277 277 LEU LEU A . n A 1 186 THR 186 278 278 THR THR A . n A 1 187 ASN 187 279 279 ASN ASN A . n A 1 188 ASN 188 280 280 ASN ASN A . n A 1 189 ALA 189 281 281 ALA ALA A . n A 1 190 LYS 190 282 282 LYS LYS A . n A 1 191 THR 191 283 283 THR THR A . n A 1 192 ILE 192 284 284 ILE ILE A . n A 1 193 ILE 193 285 285 ILE ILE A . n A 1 194 VAL 194 286 286 VAL VAL A . n A 1 195 HIS 195 287 287 HIS HIS A . n A 1 196 LEU 196 288 288 LEU LEU A . n A 1 197 ASN 197 289 289 ASN ASN A . n A 1 198 GLU 198 290 290 GLU GLU A . n A 1 199 SER 199 291 291 SER SER A . n A 1 200 VAL 200 292 292 VAL VAL A . n A 1 201 ASN 201 293 293 ASN ASN A . n A 1 202 ILE 202 294 294 ILE ILE A . n A 1 203 VAL 203 295 295 VAL VAL A . n A 1 204 CYS 204 296 296 CYS CYS A . n A 1 205 THR 205 297 297 THR THR A . n A 1 206 ARG 206 298 298 ARG ALA A . n A 1 207 PRO 207 315 ? ? ? A . n A 1 208 ASN 208 316 ? ? ? A . n A 1 209 ASN 209 317 ? ? ? A . n A 1 210 GLY 210 318 ? ? ? A . n A 1 211 GLY 211 319 ? ? ? A . n A 1 212 SER 212 320 ? ? ? A . n A 1 213 GLY 213 321 ? ? ? A . n A 1 214 SER 214 322 ? ? ? A . n A 1 215 GLY 215 323 ? ? ? A . n A 1 216 GLY 216 324 ? ? ? A . n A 1 217 ASN 217 325 ? ? ? A . n A 1 218 ILE 218 326 ? ? ? A . n A 1 219 ARG 219 327 ? ? ? A . n A 1 220 GLN 220 328 ? ? ? A . n A 1 221 ALA 221 329 329 ALA ALA A . n A 1 222 HIS 222 330 330 HIS HIS A . n A 1 223 CYS 223 331 331 CYS CYS A . n A 1 224 ASN 224 332 332 ASN ASN A . n A 1 225 ILE 225 333 333 ILE ILE A . n A 1 226 ASN 226 334 334 ASN ASN A . n A 1 227 GLU 227 335 335 GLU GLU A . n A 1 228 SER 228 336 336 SER SER A . n A 1 229 LYS 229 337 337 LYS LYS A . n A 1 230 TRP 230 338 338 TRP TRP A . n A 1 231 ASN 231 339 339 ASN ASN A . n A 1 232 ASN 232 340 340 ASN ASN A . n A 1 233 THR 233 341 341 THR THR A . n A 1 234 LEU 234 342 342 LEU LEU A . n A 1 235 GLN 235 343 343 GLN GLN A . n A 1 236 LYS 236 344 344 LYS LYS A . n A 1 237 VAL 237 345 345 VAL VAL A . n A 1 238 GLY 238 346 346 GLY GLY A . n A 1 239 GLU 239 347 347 GLU GLU A . n A 1 240 GLU 240 348 348 GLU GLU A . n A 1 241 LEU 241 349 349 LEU LEU A . n A 1 242 ALA 242 350 350 ALA ALA A . n A 1 243 LYS 243 351 351 LYS LYS A . n A 1 244 HIS 244 352 352 HIS HIS A . n A 1 245 PHE 245 353 353 PHE PHE A . n A 1 246 PRO 246 354 354 PRO PRO A . n A 1 247 SER 247 356 356 SER SER A . n A 1 248 LYS 248 357 357 LYS LYS A . n A 1 249 THR 249 358 358 THR THR A . n A 1 250 ILE 250 359 359 ILE ILE A . n A 1 251 LYS 251 360 360 LYS LYS A . n A 1 252 PHE 252 361 361 PHE PHE A . n A 1 253 GLU 253 362 362 GLU GLU A . n A 1 254 PRO 254 363 363 PRO PRO A . n A 1 255 SER 255 364 364 SER SER A . n A 1 256 SER 256 365 365 SER SER A . n A 1 257 GLY 257 366 366 GLY GLY A . n A 1 258 GLY 258 367 367 GLY GLY A . n A 1 259 ASP 259 368 368 ASP ASP A . n A 1 260 LEU 260 369 369 LEU LEU A . n A 1 261 GLU 261 370 370 GLU GLU A . n A 1 262 ILE 262 371 371 ILE ILE A . n A 1 263 THR 263 372 372 THR THR A . n A 1 264 THR 264 373 373 THR THR A . n A 1 265 HIS 265 374 374 HIS HIS A . n A 1 266 SER 266 375 375 SER SER A . n A 1 267 PHE 267 376 376 PHE PHE A . n A 1 268 ASN 268 377 377 ASN ASN A . n A 1 269 CYS 269 378 378 CYS CYS A . n A 1 270 ARG 270 379 379 ARG ARG A . n A 1 271 GLY 271 380 380 GLY GLY A . n A 1 272 GLU 272 381 381 GLU GLU A . n A 1 273 PHE 273 382 382 PHE PHE A . n A 1 274 PHE 274 383 383 PHE PHE A . n A 1 275 TYR 275 384 384 TYR TYR A . n A 1 276 CYS 276 385 385 CYS CYS A . n A 1 277 ASN 277 386 386 ASN ASN A . n A 1 278 THR 278 387 387 THR THR A . n A 1 279 SER 279 388 388 SER SER A . n A 1 280 ASP 280 389 389 ASP ASP A . n A 1 281 LEU 281 390 390 LEU LEU A . n A 1 282 PHE 282 391 391 PHE PHE A . n A 1 283 ASN 283 392 392 ASN ASN A . n A 1 284 GLY 284 393 393 GLY GLY A . n A 1 285 THR 285 394 394 THR THR A . n A 1 286 TYR 286 395 395 TYR TYR A . n A 1 287 ARG 287 396 396 ARG ARG A . n A 1 288 ASN 288 397 397 ASN ASN A . n A 1 289 GLY 289 398 398 GLY GLY A . n A 1 290 THR 290 399 399 THR THR A . n A 1 291 TYR 291 400 400 TYR TYR A . n A 1 292 ASN 292 401 401 ASN ASN A . n A 1 293 HIS 293 402 402 HIS HIS A . n A 1 294 THR 294 403 403 THR THR A . n A 1 295 GLY 295 404 404 GLY GLY A . n A 1 296 ARG 296 408 ? ? ? A . n A 1 297 SER 297 409 ? ? ? A . n A 1 298 SER 298 410 ? ? ? A . n A 1 299 ASN 299 411 ? ? ? A . n A 1 300 GLY 300 412 ? ? ? A . n A 1 301 THR 301 413 413 THR THR A . n A 1 302 ILE 302 414 414 ILE ILE A . n A 1 303 THR 303 415 415 THR THR A . n A 1 304 LEU 304 416 416 LEU LEU A . n A 1 305 GLN 305 417 417 GLN GLN A . n A 1 306 CYS 306 418 418 CYS CYS A . n A 1 307 LYS 307 419 419 LYS LYS A . n A 1 308 ILE 308 420 420 ILE ILE A . n A 1 309 LYS 309 421 421 LYS LYS A . n A 1 310 GLN 310 422 422 GLN GLN A . n A 1 311 ILE 311 423 ? ? ? A . n A 1 312 ILE 312 424 ? ? ? A . n A 1 313 ASN 313 425 ? ? ? A . n A 1 314 MET 314 426 ? ? ? A . n A 1 315 TRP 315 427 ? ? ? A . n A 1 316 GLN 316 428 ? ? ? A . n A 1 317 GLU 317 429 ? ? ? A . n A 1 318 VAL 318 430 ? ? ? A . n A 1 319 GLY 319 431 ? ? ? A . n A 1 320 ARG 320 432 ? ? ? A . n A 1 321 ALA 321 433 ? ? ? A . n A 1 322 ILE 322 434 ? ? ? A . n A 1 323 TYR 323 435 ? ? ? A . n A 1 324 ALA 324 436 ? ? ? A . n A 1 325 PRO 325 437 ? ? ? A . n A 1 326 PRO 326 438 ? ? ? A . n A 1 327 ILE 327 439 ? ? ? A . n A 1 328 GLU 328 440 ? ? ? A . n A 1 329 GLY 329 441 ? ? ? A . n A 1 330 GLU 330 442 ? ? ? A . n A 1 331 ILE 331 443 ? ? ? A . n A 1 332 THR 332 444 444 THR THR A . n A 1 333 CYS 333 445 445 CYS CYS A . n A 1 334 ASN 334 446 446 ASN ASN A . n A 1 335 SER 335 447 447 SER SER A . n A 1 336 ASN 336 448 448 ASN ASN A . n A 1 337 ILE 337 449 449 ILE ILE A . n A 1 338 THR 338 450 450 THR THR A . n A 1 339 GLY 339 451 451 GLY GLY A . n A 1 340 LEU 340 452 452 LEU LEU A . n A 1 341 LEU 341 453 453 LEU LEU A . n A 1 342 LEU 342 454 454 LEU LEU A . n A 1 343 LEU 343 455 455 LEU LEU A . n A 1 344 ARG 344 456 456 ARG ARG A . n A 1 345 ASP 345 457 457 ASP ASP A . n A 1 346 GLY 346 458 458 GLY GLY A . n A 1 347 GLY 347 458 ? ? ? A A n A 1 348 GLN 348 458 ? ? ? A B n A 1 349 SER 349 458 ? ? ? A C n A 1 350 ASN 350 458 ? ? ? A D n A 1 351 GLU 351 458 ? ? ? A E n A 1 352 THR 352 458 ? ? ? A F n A 1 353 ASN 353 458 ? ? ? A G n A 1 354 ASP 354 464 464 ASP ASP A . n A 1 355 THR 355 465 465 THR THR A . n A 1 356 GLU 356 466 466 GLU GLU A . n A 1 357 THR 357 467 467 THR THR A . n A 1 358 PHE 358 468 468 PHE PHE A . n A 1 359 ARG 359 469 469 ARG ARG A . n A 1 360 PRO 360 470 470 PRO PRO A . n A 1 361 GLY 361 471 471 GLY GLY A . n A 1 362 GLY 362 472 472 GLY GLY A . n A 1 363 GLY 363 473 473 GLY GLY A . n A 1 364 ASP 364 474 474 ASP ASP A . n A 1 365 MET 365 475 475 MET MET A . n A 1 366 ARG 366 476 476 ARG ARG A . n A 1 367 ASP 367 477 477 ASP ASP A . n A 1 368 ASN 368 478 478 ASN ASN A . n A 1 369 TRP 369 479 479 TRP TRP A . n A 1 370 ARG 370 480 480 ARG ARG A . n A 1 371 SER 371 481 481 SER SER A . n A 1 372 GLU 372 482 482 GLU GLU A . n A 1 373 LEU 373 483 483 LEU LEU A . n A 1 374 TYR 374 484 484 TYR TYR A . n A 1 375 LYS 375 485 485 LYS LYS A . n A 1 376 TYR 376 486 486 TYR TYR A . n A 1 377 LYS 377 487 487 LYS LYS A . n A 1 378 VAL 378 488 488 VAL VAL A . n A 1 379 VAL 379 489 489 VAL VAL A . n A 1 380 GLU 380 490 490 GLU GLU A . n A 1 381 ILE 381 491 491 ILE ILE A . n A 1 382 LYS 382 492 ? ? ? A . n B 2 1 ALA 1 1 1 ALA ALA B . n B 2 2 VAL 2 2 2 VAL VAL B . n B 2 3 GLN 3 3 3 GLN GLN B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 GLN 5 5 5 GLN GLN B . n B 2 6 GLU 6 6 6 GLU GLU B . n B 2 7 SER 7 7 7 SER SER B . n B 2 8 GLY 8 8 8 GLY GLY B . n B 2 9 GLY 9 9 9 GLY GLY B . n B 2 10 GLY 10 10 10 GLY GLY B . n B 2 11 LEU 11 11 11 LEU LEU B . n B 2 12 VAL 12 12 12 VAL VAL B . n B 2 13 GLN 13 13 13 GLN GLN B . n B 2 14 ALA 14 14 14 ALA ALA B . n B 2 15 GLY 15 15 15 GLY GLY B . n B 2 16 GLY 16 16 16 GLY GLY B . n B 2 17 SER 17 17 17 SER SER B . n B 2 18 LEU 18 18 18 LEU LEU B . n B 2 19 ARG 19 19 19 ARG ARG B . n B 2 20 LEU 20 20 20 LEU LEU B . n B 2 21 SER 21 21 21 SER SER B . n B 2 22 CYS 22 22 22 CYS CYS B . n B 2 23 THR 23 23 23 THR THR B . n B 2 24 ALA 24 24 24 ALA ALA B . n B 2 25 SER 25 25 25 SER SER B . n B 2 26 GLY 26 26 26 GLY GLY B . n B 2 27 ARG 27 27 27 ARG ARG B . n B 2 28 ILE 28 28 28 ILE ILE B . n B 2 29 SER 29 29 29 SER SER B . n B 2 30 SER 30 30 30 SER SER B . n B 2 31 SER 31 31 31 SER SER B . n B 2 32 TYR 32 32 32 TYR TYR B . n B 2 33 ASP 33 33 33 ASP ASP B . n B 2 34 MET 34 34 34 MET MET B . n B 2 35 GLY 35 35 35 GLY GLY B . n B 2 36 TRP 36 36 36 TRP TRP B . n B 2 37 PHE 37 37 37 PHE PHE B . n B 2 38 ARG 38 38 38 ARG ARG B . n B 2 39 GLN 39 39 39 GLN GLN B . n B 2 40 ALA 40 40 40 ALA ALA B . n B 2 41 PRO 41 41 41 PRO PRO B . n B 2 42 GLY 42 42 42 GLY GLY B . n B 2 43 LYS 43 43 43 LYS LYS B . n B 2 44 GLU 44 44 44 GLU GLU B . n B 2 45 ARG 45 45 45 ARG ARG B . n B 2 46 GLU 46 46 46 GLU GLU B . n B 2 47 PHE 47 47 47 PHE PHE B . n B 2 48 VAL 48 48 48 VAL VAL B . n B 2 49 ALA 49 49 49 ALA ALA B . n B 2 50 ALA 50 50 50 ALA ALA B . n B 2 51 ILE 51 51 51 ILE ILE B . n B 2 52 SER 52 52 52 SER SER B . n B 2 53 TRP 53 52 52 TRP TRP B A n B 2 54 SER 54 53 53 SER SER B . n B 2 55 GLY 55 54 54 GLY GLY B . n B 2 56 GLY 56 55 55 GLY GLY B . n B 2 57 THR 57 56 56 THR THR B . n B 2 58 THR 58 57 57 THR THR B . n B 2 59 ASP 59 58 58 ASP ASP B . n B 2 60 TYR 60 59 59 TYR TYR B . n B 2 61 ALA 61 60 60 ALA ALA B . n B 2 62 ASP 62 61 61 ASP ASP B . n B 2 63 SER 63 62 62 SER SER B . n B 2 64 VAL 64 63 63 VAL VAL B . n B 2 65 LYS 65 64 64 LYS LYS B . n B 2 66 GLY 66 65 65 GLY GLY B . n B 2 67 ARG 67 66 66 ARG ARG B . n B 2 68 PHE 68 67 67 PHE PHE B . n B 2 69 ALA 69 68 68 ALA ALA B . n B 2 70 ILE 70 69 69 ILE ILE B . n B 2 71 SER 71 70 70 SER SER B . n B 2 72 LYS 72 71 71 LYS LYS B . n B 2 73 ASP 73 72 72 ASP ASP B . n B 2 74 ASN 74 73 73 ASN ASN B . n B 2 75 ALA 75 74 74 ALA ALA B . n B 2 76 LYS 76 75 75 LYS LYS B . n B 2 77 ASN 77 76 76 ASN ASN B . n B 2 78 ALA 78 77 77 ALA ALA B . n B 2 79 VAL 79 78 78 VAL VAL B . n B 2 80 TYR 80 79 79 TYR TYR B . n B 2 81 LEU 81 80 80 LEU LEU B . n B 2 82 GLN 82 81 81 GLN GLN B . n B 2 83 MET 83 82 82 MET MET B . n B 2 84 ASN 84 82 82 ASN ASN B A n B 2 85 SER 85 82 82 SER SER B B n B 2 86 LEU 86 82 82 LEU LEU B C n B 2 87 LYS 87 83 83 LYS LYS B . n B 2 88 PRO 88 84 84 PRO PRO B . n B 2 89 GLU 89 85 85 GLU GLU B . n B 2 90 ASP 90 86 86 ASP ASP B . n B 2 91 THR 91 87 87 THR THR B . n B 2 92 ALA 92 88 88 ALA ALA B . n B 2 93 VAL 93 89 89 VAL VAL B . n B 2 94 TYR 94 90 90 TYR TYR B . n B 2 95 TYR 95 91 91 TYR TYR B . n B 2 96 CYS 96 92 92 CYS CYS B . n B 2 97 ALA 97 93 93 ALA ALA B . n B 2 98 ALA 98 94 94 ALA ALA B . n B 2 99 LYS 99 95 95 LYS LYS B . n B 2 100 TRP 100 96 96 TRP TRP B . n B 2 101 ARG 101 97 97 ARG ARG B . n B 2 102 PRO 102 98 98 PRO PRO B . n B 2 103 LEU 103 99 99 LEU LEU B . n B 2 104 ARG 104 100 100 ARG ARG B . n B 2 105 TYR 105 100 100 TYR TYR B A n B 2 106 SER 106 100 100 SER SER B B n B 2 107 ASP 107 100 100 ASP ASP B C n B 2 108 TYR 108 100 100 TYR TYR B D n B 2 109 PRO 109 100 100 PRO PRO B E n B 2 110 SER 110 100 100 SER SER B F n B 2 111 ASN 111 100 100 ASN ASN B G n B 2 112 SER 112 100 100 SER SER B H n B 2 113 ASP 113 100 100 ASP ASP B I n B 2 114 TYR 114 100 100 TYR TYR B J n B 2 115 TYR 115 101 101 TYR TYR B . n B 2 116 ASP 116 102 102 ASP ASP B . n B 2 117 TRP 117 103 103 TRP TRP B . n B 2 118 GLY 118 104 104 GLY GLY B . n B 2 119 GLN 119 105 105 GLN GLN B . n B 2 120 GLY 120 106 106 GLY GLY B . n B 2 121 THR 121 107 107 THR THR B . n B 2 122 GLN 122 108 108 GLN GLN B . n B 2 123 VAL 123 109 109 VAL VAL B . n B 2 124 THR 124 110 110 THR THR B . n B 2 125 VAL 125 111 111 VAL VAL B . n B 2 126 SER 126 112 112 SER SER B . n B 2 127 SER 127 113 113 SER SER B . n B 2 128 GLU 128 114 ? ? ? B . n B 2 129 GLN 129 115 ? ? ? B . n B 2 130 LYS 130 116 ? ? ? B . n B 2 131 LEU 131 117 ? ? ? B . n B 2 132 ILE 132 118 ? ? ? B . n B 2 133 SER 133 119 ? ? ? B . n B 2 134 GLU 134 120 ? ? ? B . n B 2 135 GLU 135 121 ? ? ? B . n B 2 136 ASP 136 122 ? ? ? B . n B 2 137 LEU 137 123 ? ? ? B . n B 2 138 HIS 138 124 ? ? ? B . n B 2 139 HIS 139 125 ? ? ? B . n B 2 140 HIS 140 126 ? ? ? B . n B 2 141 HIS 141 127 ? ? ? B . n B 2 142 HIS 142 128 ? ? ? B . n B 2 143 HIS 143 129 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 734 734 NAG NAG A . D 3 NAG 1 741 741 NAG NAG A . E 3 NAG 1 762 762 NAG NAG A . F 3 NAG 1 776 776 NAG NAG A . G 3 NAG 1 789 789 NAG NAG A . H 3 NAG 1 886 886 NAG NAG A . I 3 NAG 1 892 892 NAG NAG A . J 3 NAG 1 897 897 NAG NAG A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 277 A ASN 386 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 197 A ASN 289 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 184 A ASN 276 ? ASN 'GLYCOSYLATION SITE' 4 A ASN 170 A ASN 262 ? ASN 'GLYCOSYLATION SITE' 5 A ASN 142 A ASN 234 ? ASN 'GLYCOSYLATION SITE' 6 A ASN 288 A ASN 397 ? ASN 'GLYCOSYLATION SITE' 7 A ASN 149 A ASN 241 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4110 ? 1 MORE 23 ? 1 'SSA (A^2)' 20000 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-02 2 'Structure model' 1 1 2012-06-13 3 'Structure model' 1 2 2012-09-12 4 'Structure model' 1 3 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' database_PDB_caveat 3 4 'Structure model' entity 4 4 'Structure model' pdbx_chem_comp_identifier 5 4 'Structure model' pdbx_entity_nonpoly 6 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_site 9 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_chem_comp.type' 3 4 'Structure model' '_entity.pdbx_description' 4 4 'Structure model' '_pdbx_entity_nonpoly.name' 5 4 'Structure model' '_struct_conn.pdbx_dist_value' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_conn.pdbx_role' 8 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 3.0248 23.5660 -36.4179 0.4195 1.4789 0.2315 0.4383 0.1650 0.3519 0.8374 0.5895 4.0228 -0.6084 -1.0408 0.6533 0.5977 -0.0659 -0.1954 0.6023 -0.0512 0.1225 -0.4281 -0.5574 -2.2135 'X-RAY DIFFRACTION' 2 ? refined -13.3920 16.1432 -20.0504 0.1861 2.3419 0.4104 0.0876 0.1697 0.0571 0.5265 0.1602 2.1062 0.0462 -0.7987 -0.3620 0.3256 -0.1858 -0.0324 0.6774 -0.0794 0.4323 0.0265 -0.1330 -2.6376 'X-RAY DIFFRACTION' 3 ? refined 16.1712 7.2438 -12.1085 0.0912 0.5295 -0.0686 -0.7114 -0.0553 -0.1010 0.2489 0.2396 0.2989 0.0316 -0.0961 -0.0059 0.2684 0.2506 0.7572 0.1807 0.2235 0.0259 0.2101 0.4038 -0.4011 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 45 A 256 '( CHAIN A AND RESID 45:256 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 257 A 472 '( CHAIN A AND RESID 257:472 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 B 1 B 113 '( CHAIN B AND RESID 1:113 )' ? ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SERGUI 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.4_486)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ND2 A ASN 392 ? ? C1 A NAG 892 ? ? 1.17 2 1 CG A ASN 241 ? ? C1 A NAG 741 ? ? 1.93 3 1 ND2 A ASN 289 ? ? C2 A NAG 789 ? ? 1.94 4 1 OD1 A ASN 241 ? ? C1 A NAG 741 ? ? 1.97 5 1 OD1 A ASP 389 ? ? CG2 A THR 403 ? ? 2.06 6 1 OD1 A ASN 241 ? ? C2 A NAG 741 ? ? 2.07 7 1 ND2 A ASN 234 ? ? C2 A NAG 734 ? ? 2.17 8 1 OD1 A ASN 386 ? ? OG A SER 388 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 82 ? ? 139.96 61.77 2 1 ASN A 88 ? ? 65.51 -4.31 3 1 ASN A 94 ? ? -164.03 94.16 4 1 PHE A 210 ? ? -164.60 110.54 5 1 ASP A 211 ? ? -164.45 115.80 6 1 PRO A 212 ? ? -46.94 156.40 7 1 ASN A 230 ? ? -58.04 103.02 8 1 GLN A 258 ? ? 80.02 -46.45 9 1 GLU A 268 ? ? 72.17 -118.02 10 1 SER A 274 ? ? -170.68 146.85 11 1 PRO A 354 ? ? -74.90 -117.45 12 1 PHE A 376 ? ? 177.67 167.96 13 1 ARG A 379 ? ? 53.95 15.07 14 1 PHE A 391 ? ? -93.85 59.98 15 1 ARG A 396 ? ? -74.39 -131.07 16 1 SER B 31 ? ? -86.72 38.96 17 1 VAL B 48 ? ? -132.44 -54.30 18 1 ASP B 100 I ? 47.65 85.11 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C1 ? A NAG 734 ? 'WRONG HAND' . 2 1 C1 ? A NAG 897 ? PLANAR . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 298 ? CG ? A ARG 206 CG 2 1 Y 1 A ARG 298 ? CD ? A ARG 206 CD 3 1 Y 1 A ARG 298 ? NE ? A ARG 206 NE 4 1 Y 1 A ARG 298 ? CZ ? A ARG 206 CZ 5 1 Y 1 A ARG 298 ? NH1 ? A ARG 206 NH1 6 1 Y 1 A ARG 298 ? NH2 ? A ARG 206 NH2 7 1 N 1 A NAG 892 ? O1 ? I NAG 1 O1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 20 ? A ASP 1 2 1 Y 1 A ILE 21 ? A ILE 2 3 1 Y 1 A ALA 22 ? A ALA 3 4 1 Y 1 A THR 23 ? A THR 4 5 1 Y 1 A MET 24 ? A MET 5 6 1 Y 1 A TYR 25 ? A TYR 6 7 1 Y 1 A SER 26 ? A SER 7 8 1 Y 1 A MET 27 ? A MET 8 9 1 Y 1 A GLN 28 ? A GLN 9 10 1 Y 1 A LEU 29 ? A LEU 10 11 1 Y 1 A ALA 30 ? A ALA 11 12 1 Y 1 A SER 31 ? A SER 12 13 1 Y 1 A CYS 32 ? A CYS 13 14 1 Y 1 A VAL 33 ? A VAL 14 15 1 Y 1 A THR 34 ? A THR 15 16 1 Y 1 A LEU 35 ? A LEU 16 17 1 Y 1 A THR 36 ? A THR 17 18 1 Y 1 A LEU 37 ? A LEU 18 19 1 Y 1 A VAL 38 ? A VAL 19 20 1 Y 1 A LEU 39 ? A LEU 20 21 1 Y 1 A LEU 40 ? A LEU 21 22 1 Y 1 A VAL 41 ? A VAL 22 23 1 Y 1 A ASN 42 ? A ASN 23 24 1 Y 1 A SER 43 ? A SER 24 25 1 Y 1 A VAL 44 ? A VAL 25 26 1 Y 1 A PRO 191 ? A PRO 99 27 1 Y 1 A CYS 192 ? A CYS 100 28 1 Y 1 A VAL 193 ? A VAL 101 29 1 Y 1 A LYS 194 ? A LYS 102 30 1 Y 1 A LEU 195 ? A LEU 103 31 1 Y 1 A THR 196 ? A THR 104 32 1 Y 1 A GLY 197 ? A GLY 105 33 1 Y 1 A GLY 198 ? A GLY 106 34 1 Y 1 A SER 199 ? A SER 107 35 1 Y 1 A ALA 200 ? A ALA 108 36 1 Y 1 A ILE 201 ? A ILE 109 37 1 Y 1 A THR 202 ? A THR 110 38 1 Y 1 A GLN 203 ? A GLN 111 39 1 Y 1 A ALA 204 ? A ALA 112 40 1 Y 1 A CYS 205 ? A CYS 113 41 1 Y 1 A PRO 206 ? A PRO 114 42 1 Y 1 A LYS 207 ? A LYS 115 43 1 Y 1 A PRO 315 ? A PRO 207 44 1 Y 1 A ASN 316 ? A ASN 208 45 1 Y 1 A ASN 317 ? A ASN 209 46 1 Y 1 A GLY 318 ? A GLY 210 47 1 Y 1 A GLY 319 ? A GLY 211 48 1 Y 1 A SER 320 ? A SER 212 49 1 Y 1 A GLY 321 ? A GLY 213 50 1 Y 1 A SER 322 ? A SER 214 51 1 Y 1 A GLY 323 ? A GLY 215 52 1 Y 1 A GLY 324 ? A GLY 216 53 1 Y 1 A ASN 325 ? A ASN 217 54 1 Y 1 A ILE 326 ? A ILE 218 55 1 Y 1 A ARG 327 ? A ARG 219 56 1 Y 1 A GLN 328 ? A GLN 220 57 1 Y 1 A ARG 408 ? A ARG 296 58 1 Y 1 A SER 409 ? A SER 297 59 1 Y 1 A SER 410 ? A SER 298 60 1 Y 1 A ASN 411 ? A ASN 299 61 1 Y 1 A GLY 412 ? A GLY 300 62 1 Y 1 A ILE 423 ? A ILE 311 63 1 Y 1 A ILE 424 ? A ILE 312 64 1 Y 1 A ASN 425 ? A ASN 313 65 1 Y 1 A MET 426 ? A MET 314 66 1 Y 1 A TRP 427 ? A TRP 315 67 1 Y 1 A GLN 428 ? A GLN 316 68 1 Y 1 A GLU 429 ? A GLU 317 69 1 Y 1 A VAL 430 ? A VAL 318 70 1 Y 1 A GLY 431 ? A GLY 319 71 1 Y 1 A ARG 432 ? A ARG 320 72 1 Y 1 A ALA 433 ? A ALA 321 73 1 Y 1 A ILE 434 ? A ILE 322 74 1 Y 1 A TYR 435 ? A TYR 323 75 1 Y 1 A ALA 436 ? A ALA 324 76 1 Y 1 A PRO 437 ? A PRO 325 77 1 Y 1 A PRO 438 ? A PRO 326 78 1 Y 1 A ILE 439 ? A ILE 327 79 1 Y 1 A GLU 440 ? A GLU 328 80 1 Y 1 A GLY 441 ? A GLY 329 81 1 Y 1 A GLU 442 ? A GLU 330 82 1 Y 1 A ILE 443 ? A ILE 331 83 1 Y 1 A GLY 458 A A GLY 347 84 1 Y 1 A GLN 458 B A GLN 348 85 1 Y 1 A SER 458 C A SER 349 86 1 Y 1 A ASN 458 D A ASN 350 87 1 Y 1 A GLU 458 E A GLU 351 88 1 Y 1 A THR 458 F A THR 352 89 1 Y 1 A ASN 458 G A ASN 353 90 1 Y 1 A LYS 492 ? A LYS 382 91 1 Y 1 B GLU 114 ? B GLU 128 92 1 Y 1 B GLN 115 ? B GLN 129 93 1 Y 1 B LYS 116 ? B LYS 130 94 1 Y 1 B LEU 117 ? B LEU 131 95 1 Y 1 B ILE 118 ? B ILE 132 96 1 Y 1 B SER 119 ? B SER 133 97 1 Y 1 B GLU 120 ? B GLU 134 98 1 Y 1 B GLU 121 ? B GLU 135 99 1 Y 1 B ASP 122 ? B ASP 136 100 1 Y 1 B LEU 123 ? B LEU 137 101 1 Y 1 B HIS 124 ? B HIS 138 102 1 Y 1 B HIS 125 ? B HIS 139 103 1 Y 1 B HIS 126 ? B HIS 140 104 1 Y 1 B HIS 127 ? B HIS 141 105 1 Y 1 B HIS 128 ? B HIS 142 106 1 Y 1 B HIS 129 ? B HIS 143 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG #