data_3SI4 # _entry.id 3SI4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3SI4 pdb_00003si4 10.2210/pdb3si4/pdb RCSB RCSB066230 ? ? WWPDB D_1000066230 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3F68 . unspecified PDB 1K22 . unspecified PDB 1K1O . unspecified PDB 3EQ0 . unspecified PDB 2ZQ1 . unspecified PDB 3RLW . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3SI4 _pdbx_database_status.recvd_initial_deposition_date 2011-06-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Biela, A.' 1 'Heine, A.' 2 'Klebe, G.' 3 # _citation.id primary _citation.title 'Impact of ligand and protein desolvation on ligand binding to the S1 pocket of thrombin' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 418 _citation.page_first 350 _citation.page_last 366 _citation.year 2012 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22366545 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2012.01.054 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Biela, A.' 1 ? primary 'Khayat, M.' 2 ? primary 'Tan, H.' 3 ? primary 'Kong, J.' 4 ? primary 'Heine, A.' 5 ? primary 'Hangauer, D.' 6 ? primary 'Klebe, G.' 7 ? # _cell.entry_id 3SI4 _cell.length_a 70.350 _cell.length_b 71.230 _cell.length_c 72.590 _cell.angle_alpha 90.00 _cell.angle_beta 100.36 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3SI4 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Thrombin light chain' 4096.534 1 3.4.21.5 ? ? ? 2 polymer nat 'Thrombin heavy chain' 29780.219 1 3.4.21.5 ? ? ? 3 polymer syn 'Hirudin variant-2' 1662.683 1 ? ? 'residues in UNP 60-72' ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 non-polymer syn 'D-phenylalanyl-N-[(1-methylpyridinium-2-yl)methyl]-L-prolinamide' 367.465 1 ? ? ? ? 6 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 7 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 8 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 9 water nat water 18.015 401 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; H ? 3 'polypeptide(L)' no yes 'NGDFEEIPEE(TYS)LQ' NGDFEEIPEEYLQ I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n 3 1 ASN n 3 2 GLY n 3 3 ASP n 3 4 PHE n 3 5 GLU n 3 6 GLU n 3 7 ILE n 3 8 PRO n 3 9 GLU n 3 10 GLU n 3 11 TYS n 3 12 LEU n 3 13 GLN n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Hirudo medicinalis' _pdbx_entity_src_syn.organism_common_name 'Medicinal leech' _pdbx_entity_src_syn.ncbi_taxonomy_id 6421 _pdbx_entity_src_syn.details 'Synthetic Fragment of Hirudin From Hirudo Medicinalis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN P00734 1 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 ? 2 UNP THRB_HUMAN P00734 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 ? 3 UNP HIRV2_HIRME P09945 3 NGDFEEIPEEYLQ 60 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3SI4 L 1 H 36 ? P00734 328 ? 363 ? 1 15 2 2 3SI4 H 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 3SI4 I 1 ? 13 ? P09945 60 ? 72 ? 53 65 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 B04 peptide-like . 'D-phenylalanyl-N-[(1-methylpyridinium-2-yl)methyl]-L-prolinamide' ? 'C21 H27 N4 O2 1' 367.465 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 TYS 'L-peptide linking' n O-SULFO-L-TYROSINE ? 'C9 H11 N O6 S' 261.252 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3SI4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.52 _exptl_crystal.density_percent_sol 51.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '15% PEG8000, 20mM sodium phosphate, 175mM sodium chloride, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.15K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 108 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2009-06-23 _diffrn_detector.details 'Collimating mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Bartels Monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00 # _reflns.entry_id 3SI4 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.27 _reflns.number_obs 91193 _reflns.number_all 91193 _reflns.percent_possible_obs 98.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.038 _reflns.pdbx_netI_over_sigmaI 26.4 _reflns.B_iso_Wilson_estimate 11.620 _reflns.pdbx_redundancy 2.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.27 _reflns_shell.d_res_low 1.29 _reflns_shell.percent_possible_all 95.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.471 _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4405 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3SI4 _refine.ls_number_reflns_obs 86393 _refine.ls_number_reflns_all 90740 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.602 _refine.ls_d_res_high 1.270 _refine.ls_percent_reflns_obs 93.19 _refine.ls_R_factor_obs 0.1382 _refine.ls_R_factor_all 0.1382 _refine.ls_R_factor_R_work 0.1372 _refine.ls_R_factor_R_free 0.1586 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.03 _refine.ls_number_reflns_R_free 4347 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 20.8029 _refine.aniso_B[1][1] -0.2656 _refine.aniso_B[2][2] 0.0412 _refine.aniso_B[3][3] 0.2245 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 1.2891 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.402 _refine.solvent_model_param_bsol 52.054 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.95 _refine.pdbx_ls_cross_valid_method 'Free R' _refine.details ? _refine.pdbx_starting_model 1H8D _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.13 _refine.overall_FOM_work_R_set 0.9254 _refine.B_iso_max 51.970 _refine.B_iso_min 7.160 _refine.pdbx_overall_phase_error 14.0200 _refine.occupancy_max 1.000 _refine.occupancy_min 0.240 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2341 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 54 _refine_hist.number_atoms_solvent 401 _refine_hist.number_atoms_total 2796 _refine_hist.d_res_high 1.270 _refine_hist.d_res_low 34.602 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 2591 0.008 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3525 1.128 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 367 0.075 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 449 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 1037 16.022 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 1.2700 1.2844 30 79.0000 2340 . 0.2262 0.2684 . 116 . 2456 . 'X-RAY DIFFRACTION' . 1.2844 1.2995 30 82.0000 2356 . 0.2190 0.2507 . 123 . 2479 . 'X-RAY DIFFRACTION' . 1.2995 1.3154 30 83.0000 2452 . 0.2006 0.2210 . 134 . 2586 . 'X-RAY DIFFRACTION' . 1.3154 1.3320 30 86.0000 2494 . 0.1935 0.2303 . 139 . 2633 . 'X-RAY DIFFRACTION' . 1.3320 1.3496 30 87.0000 2560 . 0.1711 0.2116 . 126 . 2686 . 'X-RAY DIFFRACTION' . 1.3496 1.3681 30 87.0000 2544 . 0.1640 0.1639 . 134 . 2678 . 'X-RAY DIFFRACTION' . 1.3681 1.3876 30 90.0000 2635 . 0.1563 0.1915 . 136 . 2771 . 'X-RAY DIFFRACTION' . 1.3876 1.4083 30 89.0000 2592 . 0.1455 0.1762 . 150 . 2742 . 'X-RAY DIFFRACTION' . 1.4083 1.4303 30 90.0000 2665 . 0.1357 0.1813 . 143 . 2808 . 'X-RAY DIFFRACTION' . 1.4303 1.4538 30 92.0000 2662 . 0.1303 0.1636 . 139 . 2801 . 'X-RAY DIFFRACTION' . 1.4538 1.4788 30 92.0000 2701 . 0.1247 0.1357 . 145 . 2846 . 'X-RAY DIFFRACTION' . 1.4788 1.5057 30 92.0000 2689 . 0.1256 0.1475 . 150 . 2839 . 'X-RAY DIFFRACTION' . 1.5057 1.5347 30 94.0000 2729 . 0.1119 0.1657 . 138 . 2867 . 'X-RAY DIFFRACTION' . 1.5347 1.5660 30 95.0000 2812 . 0.1044 0.1285 . 153 . 2965 . 'X-RAY DIFFRACTION' . 1.5660 1.6001 30 96.0000 2776 . 0.1035 0.1490 . 128 . 2904 . 'X-RAY DIFFRACTION' . 1.6001 1.6373 30 96.0000 2854 . 0.1014 0.1299 . 138 . 2992 . 'X-RAY DIFFRACTION' . 1.6373 1.6782 30 96.0000 2808 . 0.1005 0.1394 . 157 . 2965 . 'X-RAY DIFFRACTION' . 1.6782 1.7236 30 96.0000 2816 . 0.1025 0.1221 . 158 . 2974 . 'X-RAY DIFFRACTION' . 1.7236 1.7743 30 98.0000 2846 . 0.1053 0.1268 . 140 . 2986 . 'X-RAY DIFFRACTION' . 1.7743 1.8316 30 98.0000 2875 . 0.1110 0.1334 . 155 . 3030 . 'X-RAY DIFFRACTION' . 1.8316 1.8971 30 98.0000 2838 . 0.1142 0.1600 . 165 . 3003 . 'X-RAY DIFFRACTION' . 1.8971 1.9730 30 99.0000 2931 . 0.1153 0.1355 . 145 . 3076 . 'X-RAY DIFFRACTION' . 1.9730 2.0628 30 98.0000 2901 . 0.1243 0.1728 . 118 . 3019 . 'X-RAY DIFFRACTION' . 2.0628 2.1715 30 99.0000 2930 . 0.1259 0.1464 . 160 . 3090 . 'X-RAY DIFFRACTION' . 2.1715 2.3076 30 99.0000 2846 . 0.1301 0.1667 . 184 . 3030 . 'X-RAY DIFFRACTION' . 2.3076 2.4857 30 99.0000 2920 . 0.1385 0.1515 . 157 . 3077 . 'X-RAY DIFFRACTION' . 2.4857 2.7357 30 99.0000 2893 . 0.1490 0.1637 . 168 . 3061 . 'X-RAY DIFFRACTION' . 2.7357 3.1314 30 99.0000 2930 . 0.1517 0.1768 . 157 . 3087 . 'X-RAY DIFFRACTION' . 3.1314 3.9443 30 98.0000 2900 . 0.1396 0.1611 . 144 . 3044 . 'X-RAY DIFFRACTION' . 3.9443 34.6144 30 91.0000 2751 . 0.1642 0.1499 . 147 . 2898 . 'X-RAY DIFFRACTION' . # _struct.entry_id 3SI4 _struct.title 'Human Thrombin In Complex With UBTHR104' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3SI4 _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text ;Serine Protease, Kringle, Hydrolase, Blood Coagulation, Blood Clotting, Convertion of Fibrinogen to Fibrin, Cleavage on Pairs of Basic Residues, Blood Clotting Inhibitor, Thrombin Inhibitor, Glycosylation, Blood, HYDROLASE-HYDROLASE INHIBITOR complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? I N N 8 ? J N N 9 ? K N N 9 ? L N N 9 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 15 ? SER A 19 ? PHE L 7 SER L 11 5 ? 5 HELX_P HELX_P2 2 THR A 24 B TYR A 32 J THR L 14 TYR L 14 1 ? 9 HELX_P HELX_P3 3 ALA B 41 ? CYS B 44 ? ALA H 55 CYS H 58 5 ? 4 HELX_P HELX_P4 4 PRO B 48 B ASP B 51 E PRO H 60 ASP H 60 5 ? 4 HELX_P HELX_P5 5 THR B 55 I ASN B 57 ? THR H 60 ASN H 62 5 ? 3 HELX_P HELX_P6 6 ASP B 122 ? LEU B 130 ? ASP H 125 LEU H 130 1 ? 9 HELX_P HELX_P7 7 GLU B 169 ? SER B 176 ? GLU H 164 SER H 171 1 ? 8 HELX_P HELX_P8 8 LYS B 191 ? GLY B 195 C LYS H 185 GLY H 186 5 ? 5 HELX_P HELX_P9 9 LEU B 246 ? GLY B 258 ? LEU H 234 GLY H 246 1 ? 13 HELX_P HELX_P10 10 PRO C 8 ? LEU C 12 ? PRO I 60 LEU I 64 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.047 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.035 ? ? covale1 covale one ? B ASN 53 ND2 ? G ? 1_555 D NAG . C1 ? G H ASN 60 H NAG 260 1_555 ? ? ? ? ? ? ? 1.427 ? N-Glycosylation covale2 covale both ? C GLU 10 C ? ? ? 1_555 C TYS 11 N ? ? I GLU 62 I TYS 63 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? C TYS 11 C ? ? ? 1_555 C LEU 12 N ? ? I TYS 63 I LEU 64 1_555 ? ? ? ? ? ? ? 1.329 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.68 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER B 5 ? ASP B 6 ? SER H 20 ASP H 21 A 2 GLN B 161 ? PRO B 166 ? GLN H 156 PRO H 161 A 3 LYS B 135 ? GLY B 140 ? LYS H 135 GLY H 140 A 4 PRO B 208 ? LYS B 212 ? PRO H 198 LYS H 202 A 5 TRP B 219 ? TRP B 227 ? TRP H 207 TRP H 215 A 6 GLY B 238 ? HIS B 242 ? GLY H 226 HIS H 230 A 7 MET B 185 ? ALA B 188 ? MET H 180 ALA H 183 B 1 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 B 2 GLU B 25 ? LEU B 32 ? GLU H 39 LEU H 46 B 3 TRP B 37 ? THR B 40 ? TRP H 51 THR H 54 B 4 ALA B 101 ? LEU B 105 ? ALA H 104 LEU H 108 B 5 LYS B 77 ? ILE B 86 ? LYS H 81 ILE H 90 B 6 LEU B 59 ? ILE B 63 ? LEU H 64 ILE H 68 B 7 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 C 1 LEU B 46 ? TYR B 47 A LEU H 60 TYR H 60 C 2 LYS B 52 F ASN B 53 G LYS H 60 ASN H 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER B 5 ? N SER H 20 O VAL B 162 ? O VAL H 157 A 2 3 O VAL B 163 ? O VAL H 158 N VAL B 138 ? N VAL H 138 A 3 4 N ARG B 137 ? N ARG H 137 O VAL B 210 ? O VAL H 200 A 4 5 N MET B 211 ? N MET H 201 O TYR B 220 ? O TYR H 208 A 5 6 N TRP B 227 ? N TRP H 215 O PHE B 239 ? O PHE H 227 A 6 7 O TYR B 240 ? O TYR H 228 N PHE B 186 ? N PHE H 181 B 1 2 N LEU B 18 ? N LEU H 33 O LEU B 27 ? O LEU H 41 B 2 3 N SER B 31 ? N SER H 45 O LEU B 39 ? O LEU H 53 B 3 4 N VAL B 38 ? N VAL H 52 O MET B 103 ? O MET H 106 B 4 5 O LYS B 104 ? O LYS H 107 N GLU B 82 ? N GLU H 86 B 5 6 O LYS B 77 ? O LYS H 81 N ILE B 63 ? N ILE H 68 B 6 7 O LEU B 60 ? O LEU H 65 N PHE B 19 ? N PHE H 34 C 1 2 N TYR B 47 A N TYR H 60 O LYS B 52 F O LYS H 60 # _database_PDB_matrix.entry_id 3SI4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3SI4 _atom_sites.fract_transf_matrix[1][1] 0.014215 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002599 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014039 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014004 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 ? ? ? L H n A 1 2 PHE 2 1 ? ? ? L G n A 1 3 GLY 3 1 ? ? ? L F n A 1 4 SER 4 1 ? ? ? L E n A 1 5 GLY 5 1 ? ? ? L D n A 1 6 GLU 6 1 1 GLU GLU L C n A 1 7 ALA 7 1 1 ALA ALA L B n A 1 8 ASP 8 1 1 ASP ASP L A n A 1 9 CYS 9 1 1 CYS CYS L . n A 1 10 GLY 10 2 2 GLY GLY L . n A 1 11 LEU 11 3 3 LEU LEU L . n A 1 12 ARG 12 4 4 ARG ARG L . n A 1 13 PRO 13 5 5 PRO PRO L . n A 1 14 LEU 14 6 6 LEU LEU L . n A 1 15 PHE 15 7 7 PHE PHE L . n A 1 16 GLU 16 8 8 GLU GLU L . n A 1 17 LYS 17 9 9 LYS LYS L . n A 1 18 LYS 18 10 10 LYS LYS L . n A 1 19 SER 19 11 11 SER SER L . n A 1 20 LEU 20 12 12 LEU LEU L . n A 1 21 GLU 21 13 13 GLU GLU L . n A 1 22 ASP 22 14 14 ASP ASP L . n A 1 23 LYS 23 14 14 LYS LYS L A n A 1 24 THR 24 14 14 THR THR L B n A 1 25 GLU 25 14 14 GLU GLU L C n A 1 26 ARG 26 14 14 ARG ARG L D n A 1 27 GLU 27 14 14 GLU GLU L E n A 1 28 LEU 28 14 14 LEU LEU L F n A 1 29 LEU 29 14 14 LEU LEU L G n A 1 30 GLU 30 14 14 GLU GLU L H n A 1 31 SER 31 14 14 SER SER L I n A 1 32 TYR 32 14 14 TYR TYR L J n A 1 33 ILE 33 14 14 ILE ILE L K n A 1 34 ASP 34 14 ? ? ? L L n A 1 35 GLY 35 14 ? ? ? L M n A 1 36 ARG 36 15 ? ? ? L . n B 2 1 ILE 1 16 16 ILE ILE H . n B 2 2 VAL 2 17 17 VAL VAL H . n B 2 3 GLU 3 18 18 GLU GLU H . n B 2 4 GLY 4 19 19 GLY GLY H . n B 2 5 SER 5 20 20 SER SER H . n B 2 6 ASP 6 21 21 ASP ASP H . n B 2 7 ALA 7 22 22 ALA ALA H . n B 2 8 GLU 8 23 23 GLU GLU H . n B 2 9 ILE 9 24 24 ILE ILE H . n B 2 10 GLY 10 25 25 GLY GLY H . n B 2 11 MET 11 26 26 MET MET H . n B 2 12 SER 12 27 27 SER SER H . n B 2 13 PRO 13 28 28 PRO PRO H . n B 2 14 TRP 14 29 29 TRP TRP H . n B 2 15 GLN 15 30 30 GLN GLN H . n B 2 16 VAL 16 31 31 VAL VAL H . n B 2 17 MET 17 32 32 MET MET H . n B 2 18 LEU 18 33 33 LEU LEU H . n B 2 19 PHE 19 34 34 PHE PHE H . n B 2 20 ARG 20 35 35 ARG ARG H . n B 2 21 LYS 21 36 36 LYS LYS H . n B 2 22 SER 22 36 36 SER SER H A n B 2 23 PRO 23 37 37 PRO PRO H . n B 2 24 GLN 24 38 38 GLN GLN H . n B 2 25 GLU 25 39 39 GLU GLU H . n B 2 26 LEU 26 40 40 LEU LEU H . n B 2 27 LEU 27 41 41 LEU LEU H . n B 2 28 CYS 28 42 42 CYS CYS H . n B 2 29 GLY 29 43 43 GLY GLY H . n B 2 30 ALA 30 44 44 ALA ALA H . n B 2 31 SER 31 45 45 SER SER H . n B 2 32 LEU 32 46 46 LEU LEU H . n B 2 33 ILE 33 47 47 ILE ILE H . n B 2 34 SER 34 48 48 SER SER H . n B 2 35 ASP 35 49 49 ASP ASP H . n B 2 36 ARG 36 50 50 ARG ARG H . n B 2 37 TRP 37 51 51 TRP TRP H . n B 2 38 VAL 38 52 52 VAL VAL H . n B 2 39 LEU 39 53 53 LEU LEU H . n B 2 40 THR 40 54 54 THR THR H . n B 2 41 ALA 41 55 55 ALA ALA H . n B 2 42 ALA 42 56 56 ALA ALA H . n B 2 43 HIS 43 57 57 HIS HIS H . n B 2 44 CYS 44 58 58 CYS CYS H . n B 2 45 LEU 45 59 59 LEU LEU H . n B 2 46 LEU 46 60 60 LEU LEU H . n B 2 47 TYR 47 60 60 TYR TYR H A n B 2 48 PRO 48 60 60 PRO PRO H B n B 2 49 PRO 49 60 60 PRO PRO H C n B 2 50 TRP 50 60 60 TRP TRP H D n B 2 51 ASP 51 60 60 ASP ASP H E n B 2 52 LYS 52 60 60 LYS LYS H F n B 2 53 ASN 53 60 60 ASN XE5 H G n B 2 54 PHE 54 60 60 PHE PHE H H n B 2 55 THR 55 60 60 THR THR H I n B 2 56 GLU 56 61 61 GLU GLU H . n B 2 57 ASN 57 62 62 ASN ASN H . n B 2 58 ASP 58 63 63 ASP ASP H . n B 2 59 LEU 59 64 64 LEU LEU H . n B 2 60 LEU 60 65 65 LEU LEU H . n B 2 61 VAL 61 66 66 VAL VAL H . n B 2 62 ARG 62 67 67 ARG ARG H . n B 2 63 ILE 63 68 68 ILE ILE H . n B 2 64 GLY 64 69 69 GLY GLY H . n B 2 65 LYS 65 70 70 LYS LYS H . n B 2 66 HIS 66 71 71 HIS HIS H . n B 2 67 SER 67 72 72 SER SER H . n B 2 68 ARG 68 73 73 ARG ARG H . n B 2 69 THR 69 74 74 THR THR H . n B 2 70 ARG 70 75 75 ARG ARG H . n B 2 71 TYR 71 76 76 TYR TYR H . n B 2 72 GLU 72 77 77 GLU GLU H . n B 2 73 ARG 73 77 77 ARG ARG H A n B 2 74 ASN 74 78 78 ASN ASN H . n B 2 75 ILE 75 79 79 ILE ILE H . n B 2 76 GLU 76 80 80 GLU GLU H . n B 2 77 LYS 77 81 81 LYS LYS H . n B 2 78 ILE 78 82 82 ILE ILE H . n B 2 79 SER 79 83 83 SER SER H . n B 2 80 MET 80 84 84 MET MET H . n B 2 81 LEU 81 85 85 LEU LEU H . n B 2 82 GLU 82 86 86 GLU GLU H . n B 2 83 LYS 83 87 87 LYS LYS H . n B 2 84 ILE 84 88 88 ILE ILE H . n B 2 85 TYR 85 89 89 TYR TYR H . n B 2 86 ILE 86 90 90 ILE ILE H . n B 2 87 HIS 87 91 91 HIS HIS H . n B 2 88 PRO 88 92 92 PRO PRO H . n B 2 89 ARG 89 93 93 ARG ARG H . n B 2 90 TYR 90 94 94 TYR TYR H . n B 2 91 ASN 91 95 95 ASN ASN H . n B 2 92 TRP 92 96 96 TRP TRP H . n B 2 93 ARG 93 97 97 ARG ARG H . n B 2 94 GLU 94 97 97 GLU GLU H A n B 2 95 ASN 95 98 98 ASN ASN H . n B 2 96 LEU 96 99 99 LEU LEU H . n B 2 97 ASP 97 100 100 ASP ASP H . n B 2 98 ARG 98 101 101 ARG ARG H . n B 2 99 ASP 99 102 102 ASP ASP H . n B 2 100 ILE 100 103 103 ILE ILE H . n B 2 101 ALA 101 104 104 ALA ALA H . n B 2 102 LEU 102 105 105 LEU LEU H . n B 2 103 MET 103 106 106 MET MET H . n B 2 104 LYS 104 107 107 LYS LYS H . n B 2 105 LEU 105 108 108 LEU LEU H . n B 2 106 LYS 106 109 109 LYS LYS H . n B 2 107 LYS 107 110 110 LYS LYS H . n B 2 108 PRO 108 111 111 PRO PRO H . n B 2 109 VAL 109 112 112 VAL VAL H . n B 2 110 ALA 110 113 113 ALA ALA H . n B 2 111 PHE 111 114 114 PHE PHE H . n B 2 112 SER 112 115 115 SER SER H . n B 2 113 ASP 113 116 116 ASP ASP H . n B 2 114 TYR 114 117 117 TYR TYR H . n B 2 115 ILE 115 118 118 ILE ILE H . n B 2 116 HIS 116 119 119 HIS HIS H . n B 2 117 PRO 117 120 120 PRO PRO H . n B 2 118 VAL 118 121 121 VAL VAL H . n B 2 119 CYS 119 122 122 CYS CYS H . n B 2 120 LEU 120 123 123 LEU LEU H . n B 2 121 PRO 121 124 124 PRO PRO H . n B 2 122 ASP 122 125 125 ASP ASP H . n B 2 123 ARG 123 126 126 ARG ARG H . n B 2 124 GLU 124 127 127 GLU GLU H . n B 2 125 THR 125 128 128 THR THR H . n B 2 126 ALA 126 129 129 ALA ALA H . n B 2 127 ALA 127 129 129 ALA ALA H A n B 2 128 SER 128 129 129 SER SER H B n B 2 129 LEU 129 129 129 LEU LEU H C n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 GLN 131 131 131 GLN GLN H . n B 2 132 ALA 132 132 132 ALA ALA H . n B 2 133 GLY 133 133 133 GLY GLY H . n B 2 134 TYR 134 134 134 TYR TYR H . n B 2 135 LYS 135 135 135 LYS LYS H . n B 2 136 GLY 136 136 136 GLY GLY H . n B 2 137 ARG 137 137 137 ARG ARG H . n B 2 138 VAL 138 138 138 VAL VAL H . n B 2 139 THR 139 139 139 THR THR H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 TRP 141 141 141 TRP TRP H . n B 2 142 GLY 142 142 142 GLY GLY H . n B 2 143 ASN 143 143 143 ASN ASN H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 LYS 145 145 145 LYS LYS H . n B 2 146 GLU 146 146 146 GLU GLU H . n B 2 147 THR 147 147 147 THR THR H . n B 2 148 TRP 148 148 ? ? ? H . n B 2 149 THR 149 149 ? ? ? H . n B 2 150 ALA 150 149 ? ? ? H A n B 2 151 ASN 151 149 ? ? ? H B n B 2 152 VAL 152 149 ? ? ? H C n B 2 153 GLY 153 149 ? ? ? H D n B 2 154 LYS 154 149 ? ? ? H E n B 2 155 GLY 155 150 150 GLY GLY H . n B 2 156 GLN 156 151 151 GLN GLN H . n B 2 157 PRO 157 152 152 PRO PRO H . n B 2 158 SER 158 153 153 SER SER H . n B 2 159 VAL 159 154 154 VAL VAL H . n B 2 160 LEU 160 155 155 LEU LEU H . n B 2 161 GLN 161 156 156 GLN GLN H . n B 2 162 VAL 162 157 157 VAL VAL H . n B 2 163 VAL 163 158 158 VAL VAL H . n B 2 164 ASN 164 159 159 ASN ASN H . n B 2 165 LEU 165 160 160 LEU LEU H . n B 2 166 PRO 166 161 161 PRO PRO H . n B 2 167 ILE 167 162 162 ILE ILE H . n B 2 168 VAL 168 163 163 VAL VAL H . n B 2 169 GLU 169 164 164 GLU GLU H . n B 2 170 ARG 170 165 165 ARG ARG H . n B 2 171 PRO 171 166 166 PRO PRO H . n B 2 172 VAL 172 167 167 VAL VAL H . n B 2 173 CYS 173 168 168 CYS CYS H . n B 2 174 LYS 174 169 169 LYS LYS H . n B 2 175 ASP 175 170 170 ASP ASP H . n B 2 176 SER 176 171 171 SER SER H . n B 2 177 THR 177 172 172 THR THR H . n B 2 178 ARG 178 173 173 ARG ARG H . n B 2 179 ILE 179 174 174 ILE ILE H . n B 2 180 ARG 180 175 175 ARG ARG H . n B 2 181 ILE 181 176 176 ILE ILE H . n B 2 182 THR 182 177 177 THR THR H . n B 2 183 ASP 183 178 178 ASP ASP H . n B 2 184 ASN 184 179 179 ASN ASN H . n B 2 185 MET 185 180 180 MET MET H . n B 2 186 PHE 186 181 181 PHE PHE H . n B 2 187 CYS 187 182 182 CYS CYS H . n B 2 188 ALA 188 183 183 ALA ALA H . n B 2 189 GLY 189 184 184 GLY GLY H . n B 2 190 TYR 190 184 184 TYR TYR H A n B 2 191 LYS 191 185 185 LYS LYS H . n B 2 192 PRO 192 186 186 PRO PRO H . n B 2 193 ASP 193 186 186 ASP ASP H A n B 2 194 GLU 194 186 186 GLU GLU H B n B 2 195 GLY 195 186 186 GLY GLY H C n B 2 196 LYS 196 186 186 LYS LYS H D n B 2 197 ARG 197 187 187 ARG ARG H . n B 2 198 GLY 198 188 188 GLY GLY H . n B 2 199 ASP 199 189 189 ASP ASP H . n B 2 200 ALA 200 190 190 ALA ALA H . n B 2 201 CYS 201 191 191 CYS CYS H . n B 2 202 GLU 202 192 192 GLU GLU H . n B 2 203 GLY 203 193 193 GLY GLY H . n B 2 204 ASP 204 194 194 ASP ASP H . n B 2 205 SER 205 195 195 SER SER H . n B 2 206 GLY 206 196 196 GLY GLY H . n B 2 207 GLY 207 197 197 GLY GLY H . n B 2 208 PRO 208 198 198 PRO PRO H . n B 2 209 PHE 209 199 199 PHE PHE H . n B 2 210 VAL 210 200 200 VAL VAL H . n B 2 211 MET 211 201 201 MET MET H . n B 2 212 LYS 212 202 202 LYS LYS H . n B 2 213 SER 213 203 203 SER SER H . n B 2 214 PRO 214 204 204 PRO PRO H . n B 2 215 PHE 215 204 204 PHE PHE H A n B 2 216 ASN 216 204 204 ASN ASN H B n B 2 217 ASN 217 205 205 ASN ASN H . n B 2 218 ARG 218 206 206 ARG ARG H . n B 2 219 TRP 219 207 207 TRP TRP H . n B 2 220 TYR 220 208 208 TYR TYR H . n B 2 221 GLN 221 209 209 GLN GLN H . n B 2 222 MET 222 210 210 MET MET H . n B 2 223 GLY 223 211 211 GLY GLY H . n B 2 224 ILE 224 212 212 ILE ILE H . n B 2 225 VAL 225 213 213 VAL VAL H . n B 2 226 SER 226 214 214 SER SER H . n B 2 227 TRP 227 215 215 TRP TRP H . n B 2 228 GLY 228 216 216 GLY GLY H . n B 2 229 GLU 229 217 217 GLU GLU H . n B 2 230 GLY 230 219 219 GLY GLY H . n B 2 231 CYS 231 220 220 CYS CYS H . n B 2 232 ASP 232 221 221 ASP ASP H . n B 2 233 ARG 233 221 221 ARG ARG H A n B 2 234 ASP 234 222 222 ASP ASP H . n B 2 235 GLY 235 223 223 GLY GLY H . n B 2 236 LYS 236 224 224 LYS LYS H . n B 2 237 TYR 237 225 225 TYR TYR H . n B 2 238 GLY 238 226 226 GLY GLY H . n B 2 239 PHE 239 227 227 PHE PHE H . n B 2 240 TYR 240 228 228 TYR TYR H . n B 2 241 THR 241 229 229 THR THR H . n B 2 242 HIS 242 230 230 HIS HIS H . n B 2 243 VAL 243 231 231 VAL VAL H . n B 2 244 PHE 244 232 232 PHE PHE H . n B 2 245 ARG 245 233 233 ARG ARG H . n B 2 246 LEU 246 234 234 LEU LEU H . n B 2 247 LYS 247 235 235 LYS LYS H . n B 2 248 LYS 248 236 236 LYS LYS H . n B 2 249 TRP 249 237 237 TRP TRP H . n B 2 250 ILE 250 238 238 ILE ILE H . n B 2 251 GLN 251 239 239 GLN GLN H . n B 2 252 LYS 252 240 240 LYS LYS H . n B 2 253 VAL 253 241 241 VAL VAL H . n B 2 254 ILE 254 242 242 ILE ILE H . n B 2 255 ASP 255 243 243 ASP ASP H . n B 2 256 GLN 256 244 244 GLN GLN H . n B 2 257 PHE 257 245 245 PHE PHE H . n B 2 258 GLY 258 246 246 GLY GLY H . n B 2 259 GLU 259 247 ? ? ? H . n C 3 1 ASN 1 53 ? ? ? I . n C 3 2 GLY 2 54 ? ? ? I . n C 3 3 ASP 3 55 55 ASP ASP I . n C 3 4 PHE 4 56 56 PHE PHE I . n C 3 5 GLU 5 57 57 GLU GLU I . n C 3 6 GLU 6 58 58 GLU GLU I . n C 3 7 ILE 7 59 59 ILE ILE I . n C 3 8 PRO 8 60 60 PRO PRO I . n C 3 9 GLU 9 61 61 GLU GLU I . n C 3 10 GLU 10 62 62 GLU GLU I . n C 3 11 TYS 11 63 63 TYS TYS I . n C 3 12 LEU 12 64 64 LEU LEU I . n C 3 13 GLN 13 65 65 GLN GLN I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG 1 260 60 NAG XE5 H G E 5 B04 1 1 1 B04 B04 H . F 6 PO4 1 2 2 PO4 PO4 H . G 7 GOL 1 3 3 GOL GLC H . H 8 NA 1 4 4 NA NA H . I 8 NA 1 5 5 NA NA H . J 9 HOH 1 1001 9 HOH HOH L . J 9 HOH 2 1002 20 HOH HOH L . J 9 HOH 3 1003 22 HOH HOH L . J 9 HOH 4 1004 23 HOH HOH L . J 9 HOH 5 1005 24 HOH HOH L . J 9 HOH 6 1006 36 HOH HOH L . J 9 HOH 7 1007 37 HOH HOH L . J 9 HOH 8 1008 48 HOH HOH L . J 9 HOH 9 1009 57 HOH HOH L . J 9 HOH 10 1010 65 HOH HOH L . J 9 HOH 11 1011 69 HOH HOH L . J 9 HOH 12 1012 70 HOH HOH L . J 9 HOH 13 1013 73 HOH HOH L . J 9 HOH 14 1014 75 HOH HOH L . J 9 HOH 15 1015 76 HOH HOH L . J 9 HOH 16 1016 88 HOH HOH L . J 9 HOH 17 1017 100 HOH HOH L . J 9 HOH 18 1018 106 HOH HOH L . J 9 HOH 19 1019 117 HOH HOH L . J 9 HOH 20 1020 130 HOH HOH L . J 9 HOH 21 1021 133 HOH HOH L . J 9 HOH 22 1022 141 HOH HOH L . J 9 HOH 23 1023 143 HOH HOH L . J 9 HOH 24 1024 154 HOH HOH L . J 9 HOH 25 1025 158 HOH HOH L . J 9 HOH 26 1026 162 HOH HOH L . J 9 HOH 27 1027 175 HOH HOH L . J 9 HOH 28 1028 176 HOH HOH L . J 9 HOH 29 1029 178 HOH HOH L . J 9 HOH 30 1030 182 HOH HOH L . J 9 HOH 31 1031 191 HOH HOH L . J 9 HOH 32 1032 197 HOH HOH L . J 9 HOH 33 1033 203 HOH HOH L . J 9 HOH 34 1034 220 HOH HOH L . J 9 HOH 35 1035 234 HOH HOH L . J 9 HOH 36 1036 237 HOH HOH L . J 9 HOH 37 1037 254 HOH HOH L . J 9 HOH 38 1038 258 HOH HOH L . J 9 HOH 39 1039 262 HOH HOH L . J 9 HOH 40 1040 274 HOH HOH L . J 9 HOH 41 1041 275 HOH HOH L . J 9 HOH 42 1042 313 HOH HOH L . J 9 HOH 43 1043 314 HOH HOH L . J 9 HOH 44 1044 349 HOH HOH L . J 9 HOH 45 1045 356 HOH HOH L . J 9 HOH 46 1046 388 HOH HOH L . K 9 HOH 1 1047 6 HOH HOH H . K 9 HOH 2 1048 7 HOH HOH H . K 9 HOH 3 1049 8 HOH HOH H . K 9 HOH 4 1050 10 HOH HOH H . K 9 HOH 5 1051 11 HOH HOH H . K 9 HOH 6 1052 12 HOH HOH H . K 9 HOH 7 1053 13 HOH HOH H . K 9 HOH 8 1054 14 HOH HOH H . K 9 HOH 9 1055 15 HOH HOH H . K 9 HOH 10 1056 148 HOH HOH H . K 9 HOH 11 1057 149 HOH HOH H . K 9 HOH 12 1058 218 HOH HOH H . K 9 HOH 13 1059 1 HOH HOH H . K 9 HOH 14 1060 249 HOH HOH H . K 9 HOH 15 1061 250 HOH HOH H . K 9 HOH 16 1062 251 HOH HOH H . K 9 HOH 17 1063 252 HOH HOH H . K 9 HOH 18 1064 253 HOH HOH H . K 9 HOH 19 1065 2 HOH HOH H . K 9 HOH 20 1066 255 HOH HOH H . K 9 HOH 21 1067 256 HOH HOH H . K 9 HOH 22 1068 257 HOH HOH H . K 9 HOH 23 1069 3 HOH HOH H . K 9 HOH 24 1070 259 HOH HOH H . K 9 HOH 25 1071 260 HOH HOH H . K 9 HOH 26 1072 261 HOH HOH H . K 9 HOH 27 1073 4 HOH HOH H . K 9 HOH 28 1074 263 HOH HOH H . K 9 HOH 29 1075 264 HOH HOH H . K 9 HOH 30 1076 265 HOH HOH H . K 9 HOH 31 1077 266 HOH HOH H . K 9 HOH 32 1078 267 HOH HOH H . K 9 HOH 33 1079 5 HOH HOH H . K 9 HOH 34 1080 269 HOH HOH H . K 9 HOH 35 1081 270 HOH HOH H . K 9 HOH 36 1082 271 HOH HOH H . K 9 HOH 37 1083 272 HOH HOH H . K 9 HOH 38 1084 273 HOH HOH H . K 9 HOH 39 1085 16 HOH HOH H . K 9 HOH 40 1086 17 HOH HOH H . K 9 HOH 41 1087 276 HOH HOH H . K 9 HOH 42 1088 277 HOH HOH H . K 9 HOH 43 1089 278 HOH HOH H . K 9 HOH 44 1090 279 HOH HOH H . K 9 HOH 45 1091 280 HOH HOH H . K 9 HOH 46 1092 281 HOH HOH H . K 9 HOH 47 1093 282 HOH HOH H . K 9 HOH 48 1094 283 HOH HOH H . K 9 HOH 49 1095 284 HOH HOH H . K 9 HOH 50 1096 285 HOH HOH H . K 9 HOH 51 1097 286 HOH HOH H . K 9 HOH 52 1098 287 HOH HOH H . K 9 HOH 53 1099 288 HOH HOH H . K 9 HOH 54 1100 289 HOH HOH H . K 9 HOH 55 1101 290 HOH HOH H . K 9 HOH 56 1102 291 HOH HOH H . K 9 HOH 57 1103 292 HOH HOH H . K 9 HOH 58 1104 293 HOH HOH H . K 9 HOH 59 1105 294 HOH HOH H . K 9 HOH 60 1106 295 HOH HOH H . K 9 HOH 61 1107 296 HOH HOH H . K 9 HOH 62 1108 297 HOH HOH H . K 9 HOH 63 1109 298 HOH HOH H . K 9 HOH 64 1110 299 HOH HOH H . K 9 HOH 65 1111 300 HOH HOH H . K 9 HOH 66 1112 301 HOH HOH H . K 9 HOH 67 1113 302 HOH HOH H . K 9 HOH 68 1114 18 HOH HOH H . K 9 HOH 69 1115 304 HOH HOH H . K 9 HOH 70 1116 305 HOH HOH H . K 9 HOH 71 1117 306 HOH HOH H . K 9 HOH 72 1118 307 HOH HOH H . K 9 HOH 73 1119 308 HOH HOH H . K 9 HOH 74 1120 309 HOH HOH H . K 9 HOH 75 1121 310 HOH HOH H . K 9 HOH 76 1122 311 HOH HOH H . K 9 HOH 77 1123 312 HOH HOH H . K 9 HOH 78 1124 19 HOH HOH H . K 9 HOH 79 1125 21 HOH HOH H . K 9 HOH 80 1126 315 HOH HOH H . K 9 HOH 81 1127 316 HOH HOH H . K 9 HOH 82 1128 317 HOH HOH H . K 9 HOH 83 1129 318 HOH HOH H . K 9 HOH 84 1130 319 HOH HOH H . K 9 HOH 85 1131 320 HOH HOH H . K 9 HOH 86 1132 321 HOH HOH H . K 9 HOH 87 1133 322 HOH HOH H . K 9 HOH 88 1134 323 HOH HOH H . K 9 HOH 89 1135 324 HOH HOH H . K 9 HOH 90 1136 325 HOH HOH H . K 9 HOH 91 1137 326 HOH HOH H . K 9 HOH 92 1138 327 HOH HOH H . K 9 HOH 93 1139 328 HOH HOH H . K 9 HOH 94 1140 329 HOH HOH H . K 9 HOH 95 1141 330 HOH HOH H . K 9 HOH 96 1142 331 HOH HOH H . K 9 HOH 97 1143 332 HOH HOH H . K 9 HOH 98 1144 333 HOH HOH H . K 9 HOH 99 1145 334 HOH HOH H . K 9 HOH 100 1146 25 HOH HOH H . K 9 HOH 101 1147 336 HOH HOH H . K 9 HOH 102 1148 337 HOH HOH H . K 9 HOH 103 1149 338 HOH HOH H . K 9 HOH 104 1150 339 HOH HOH H . K 9 HOH 105 1151 340 HOH HOH H . K 9 HOH 106 1152 341 HOH HOH H . K 9 HOH 107 1153 342 HOH HOH H . K 9 HOH 108 1154 343 HOH HOH H . K 9 HOH 109 1155 344 HOH HOH H . K 9 HOH 110 1156 345 HOH HOH H . K 9 HOH 111 1157 346 HOH HOH H . K 9 HOH 112 1158 347 HOH HOH H . K 9 HOH 113 1159 348 HOH HOH H . K 9 HOH 114 1160 26 HOH HOH H . K 9 HOH 115 1161 350 HOH HOH H . K 9 HOH 116 1162 351 HOH HOH H . K 9 HOH 117 1163 352 HOH HOH H . K 9 HOH 118 1164 353 HOH HOH H . K 9 HOH 119 1165 354 HOH HOH H . K 9 HOH 120 1166 355 HOH HOH H . K 9 HOH 121 1167 27 HOH HOH H . K 9 HOH 122 1168 357 HOH HOH H . K 9 HOH 123 1169 358 HOH HOH H . K 9 HOH 124 1170 359 HOH HOH H . K 9 HOH 125 1171 360 HOH HOH H . K 9 HOH 126 1172 361 HOH HOH H . K 9 HOH 127 1173 362 HOH HOH H . K 9 HOH 128 1174 363 HOH HOH H . K 9 HOH 129 1175 364 HOH HOH H . K 9 HOH 130 1176 365 HOH HOH H . K 9 HOH 131 1177 366 HOH HOH H . K 9 HOH 132 1178 367 HOH HOH H . K 9 HOH 133 1179 368 HOH HOH H . K 9 HOH 134 1180 369 HOH HOH H . K 9 HOH 135 1181 370 HOH HOH H . K 9 HOH 136 1182 371 HOH HOH H . K 9 HOH 137 1183 372 HOH HOH H . K 9 HOH 138 1184 373 HOH HOH H . K 9 HOH 139 1185 28 HOH HOH H . K 9 HOH 140 1186 375 HOH HOH H . K 9 HOH 141 1187 376 HOH HOH H . K 9 HOH 142 1188 377 HOH HOH H . K 9 HOH 143 1189 378 HOH HOH H . K 9 HOH 144 1190 379 HOH HOH H . K 9 HOH 145 1191 380 HOH HOH H . K 9 HOH 146 1192 381 HOH HOH H . K 9 HOH 147 1193 382 HOH HOH H . K 9 HOH 148 1194 383 HOH HOH H . K 9 HOH 149 1195 384 HOH HOH H . K 9 HOH 150 1196 385 HOH HOH H . K 9 HOH 151 1197 386 HOH HOH H . K 9 HOH 152 1198 387 HOH HOH H . K 9 HOH 153 1199 29 HOH HOH H . K 9 HOH 154 1200 389 HOH HOH H . K 9 HOH 155 1201 390 HOH HOH H . K 9 HOH 156 1202 391 HOH HOH H . K 9 HOH 157 1203 392 HOH HOH H . K 9 HOH 158 1204 393 HOH HOH H . K 9 HOH 159 1205 394 HOH HOH H . K 9 HOH 160 1206 395 HOH HOH H . K 9 HOH 161 1207 396 HOH HOH H . K 9 HOH 162 1208 397 HOH HOH H . K 9 HOH 163 1209 398 HOH HOH H . K 9 HOH 164 1210 399 HOH HOH H . K 9 HOH 165 1211 400 HOH HOH H . K 9 HOH 166 1212 401 HOH HOH H . K 9 HOH 167 1213 30 HOH HOH H . K 9 HOH 168 1214 31 HOH HOH H . K 9 HOH 169 1215 32 HOH HOH H . K 9 HOH 170 1216 33 HOH HOH H . K 9 HOH 171 1217 34 HOH HOH H . K 9 HOH 172 1218 35 HOH HOH H . K 9 HOH 173 1219 38 HOH HOH H . K 9 HOH 174 1220 39 HOH HOH H . K 9 HOH 175 1221 40 HOH HOH H . K 9 HOH 176 1222 41 HOH HOH H . K 9 HOH 177 1223 42 HOH HOH H . K 9 HOH 178 1224 43 HOH HOH H . K 9 HOH 179 1225 44 HOH HOH H . K 9 HOH 180 1226 45 HOH HOH H . K 9 HOH 181 1227 46 HOH HOH H . K 9 HOH 182 1228 47 HOH HOH H . K 9 HOH 183 1229 49 HOH HOH H . K 9 HOH 184 1230 50 HOH HOH H . K 9 HOH 185 1231 51 HOH HOH H . K 9 HOH 186 1232 52 HOH HOH H . K 9 HOH 187 1233 53 HOH HOH H . K 9 HOH 188 1234 54 HOH HOH H . K 9 HOH 189 1235 55 HOH HOH H . K 9 HOH 190 1236 56 HOH HOH H . K 9 HOH 191 1237 58 HOH HOH H . K 9 HOH 192 1238 59 HOH HOH H . K 9 HOH 193 1239 60 HOH HOH H . K 9 HOH 194 1240 61 HOH HOH H . K 9 HOH 195 1241 62 HOH HOH H . K 9 HOH 196 1242 63 HOH HOH H . K 9 HOH 197 1243 64 HOH HOH H . K 9 HOH 198 1244 66 HOH HOH H . K 9 HOH 199 1245 67 HOH HOH H . K 9 HOH 200 1246 68 HOH HOH H . K 9 HOH 201 1247 72 HOH HOH H . K 9 HOH 202 1248 74 HOH HOH H . K 9 HOH 203 1249 77 HOH HOH H . K 9 HOH 204 1250 78 HOH HOH H . K 9 HOH 205 1251 79 HOH HOH H . K 9 HOH 206 1252 80 HOH HOH H . K 9 HOH 207 1253 81 HOH HOH H . K 9 HOH 208 1254 82 HOH HOH H . K 9 HOH 209 1255 83 HOH HOH H . K 9 HOH 210 1256 84 HOH HOH H . K 9 HOH 211 1257 85 HOH HOH H . K 9 HOH 212 1258 86 HOH HOH H . K 9 HOH 213 1259 87 HOH HOH H . K 9 HOH 214 1260 89 HOH HOH H . K 9 HOH 215 1261 90 HOH HOH H . K 9 HOH 216 1262 91 HOH HOH H . K 9 HOH 217 1263 92 HOH HOH H . K 9 HOH 218 1264 93 HOH HOH H . K 9 HOH 219 1265 94 HOH HOH H . K 9 HOH 220 1266 95 HOH HOH H . K 9 HOH 221 1267 96 HOH HOH H . K 9 HOH 222 1268 97 HOH HOH H . K 9 HOH 223 1269 98 HOH HOH H . K 9 HOH 224 1270 99 HOH HOH H . K 9 HOH 225 1271 101 HOH HOH H . K 9 HOH 226 1272 102 HOH HOH H . K 9 HOH 227 1273 103 HOH HOH H . K 9 HOH 228 1274 104 HOH HOH H . K 9 HOH 229 1275 105 HOH HOH H . K 9 HOH 230 1276 107 HOH HOH H . K 9 HOH 231 1277 108 HOH HOH H . K 9 HOH 232 1278 110 HOH HOH H . K 9 HOH 233 1279 111 HOH HOH H . K 9 HOH 234 1280 112 HOH HOH H . K 9 HOH 235 1281 113 HOH HOH H . K 9 HOH 236 1282 114 HOH HOH H . K 9 HOH 237 1283 115 HOH HOH H . K 9 HOH 238 1284 116 HOH HOH H . K 9 HOH 239 1285 118 HOH HOH H . K 9 HOH 240 1286 119 HOH HOH H . K 9 HOH 241 1287 120 HOH HOH H . K 9 HOH 242 1288 121 HOH HOH H . K 9 HOH 243 1289 122 HOH HOH H . K 9 HOH 244 1290 123 HOH HOH H . K 9 HOH 245 1291 124 HOH HOH H . K 9 HOH 246 1292 125 HOH HOH H . K 9 HOH 247 1293 126 HOH HOH H . K 9 HOH 248 1294 127 HOH HOH H . K 9 HOH 249 1295 128 HOH HOH H . K 9 HOH 250 1296 129 HOH HOH H . K 9 HOH 251 1297 131 HOH HOH H . K 9 HOH 252 1298 132 HOH HOH H . K 9 HOH 253 1299 134 HOH HOH H . K 9 HOH 254 1300 135 HOH HOH H . K 9 HOH 255 1301 136 HOH HOH H . K 9 HOH 256 1302 137 HOH HOH H . K 9 HOH 257 1303 138 HOH HOH H . K 9 HOH 258 1304 139 HOH HOH H . K 9 HOH 259 1305 140 HOH HOH H . K 9 HOH 260 1306 142 HOH HOH H . K 9 HOH 261 1307 144 HOH HOH H . K 9 HOH 262 1308 145 HOH HOH H . K 9 HOH 263 1309 146 HOH HOH H . K 9 HOH 264 1310 147 HOH HOH H . K 9 HOH 265 1311 150 HOH HOH H . K 9 HOH 266 1312 151 HOH HOH H . K 9 HOH 267 1313 152 HOH HOH H . K 9 HOH 268 1314 155 HOH HOH H . K 9 HOH 269 1315 156 HOH HOH H . K 9 HOH 270 1316 157 HOH HOH H . K 9 HOH 271 1317 159 HOH HOH H . K 9 HOH 272 1318 160 HOH HOH H . K 9 HOH 273 1319 161 HOH HOH H . K 9 HOH 274 1320 163 HOH HOH H . K 9 HOH 275 1321 164 HOH HOH H . K 9 HOH 276 1322 165 HOH HOH H . K 9 HOH 277 1323 166 HOH HOH H . K 9 HOH 278 1324 167 HOH HOH H . K 9 HOH 279 1325 168 HOH HOH H . K 9 HOH 280 1326 169 HOH HOH H . K 9 HOH 281 1327 170 HOH HOH H . K 9 HOH 282 1328 171 HOH HOH H . K 9 HOH 283 1329 172 HOH HOH H . K 9 HOH 284 1330 173 HOH HOH H . K 9 HOH 285 1331 174 HOH HOH H . K 9 HOH 286 1332 179 HOH HOH H . K 9 HOH 287 1333 180 HOH HOH H . K 9 HOH 288 1334 181 HOH HOH H . K 9 HOH 289 1335 183 HOH HOH H . K 9 HOH 290 1336 185 HOH HOH H . K 9 HOH 291 1337 186 HOH HOH H . K 9 HOH 292 1338 187 HOH HOH H . K 9 HOH 293 1339 188 HOH HOH H . K 9 HOH 294 1340 189 HOH HOH H . K 9 HOH 295 1341 190 HOH HOH H . K 9 HOH 296 1342 193 HOH HOH H . K 9 HOH 297 1343 194 HOH HOH H . K 9 HOH 298 1344 195 HOH HOH H . K 9 HOH 299 1345 196 HOH HOH H . K 9 HOH 300 1346 198 HOH HOH H . K 9 HOH 301 1347 199 HOH HOH H . K 9 HOH 302 1348 200 HOH HOH H . K 9 HOH 303 1349 201 HOH HOH H . K 9 HOH 304 1350 202 HOH HOH H . K 9 HOH 305 1351 204 HOH HOH H . K 9 HOH 306 1352 206 HOH HOH H . K 9 HOH 307 1353 207 HOH HOH H . K 9 HOH 308 1354 208 HOH HOH H . K 9 HOH 309 1355 209 HOH HOH H . K 9 HOH 310 1356 210 HOH HOH H . K 9 HOH 311 1357 211 HOH HOH H . K 9 HOH 312 1358 212 HOH HOH H . K 9 HOH 313 1359 213 HOH HOH H . K 9 HOH 314 1360 214 HOH HOH H . K 9 HOH 315 1361 215 HOH HOH H . K 9 HOH 316 1362 216 HOH HOH H . K 9 HOH 317 1363 217 HOH HOH H . K 9 HOH 318 1364 219 HOH HOH H . K 9 HOH 319 1365 221 HOH HOH H . K 9 HOH 320 1366 222 HOH HOH H . K 9 HOH 321 1367 223 HOH HOH H . K 9 HOH 322 1368 224 HOH HOH H . K 9 HOH 323 1369 225 HOH HOH H . K 9 HOH 324 1370 226 HOH HOH H . K 9 HOH 325 1371 227 HOH HOH H . K 9 HOH 326 1372 228 HOH HOH H . K 9 HOH 327 1373 229 HOH HOH H . K 9 HOH 328 1374 230 HOH HOH H . K 9 HOH 329 1375 231 HOH HOH H . K 9 HOH 330 1376 232 HOH HOH H . K 9 HOH 331 1377 233 HOH HOH H . K 9 HOH 332 1378 235 HOH HOH H . K 9 HOH 333 1379 236 HOH HOH H . K 9 HOH 334 1380 238 HOH HOH H . K 9 HOH 335 1381 239 HOH HOH H . K 9 HOH 336 1382 240 HOH HOH H . K 9 HOH 337 1383 241 HOH HOH H . K 9 HOH 338 1384 242 HOH HOH H . K 9 HOH 339 1385 243 HOH HOH H . K 9 HOH 340 1386 244 HOH HOH H . K 9 HOH 341 1387 245 HOH HOH H . K 9 HOH 342 1388 246 HOH HOH H . K 9 HOH 343 1389 247 HOH HOH H . L 9 HOH 1 1390 71 HOH HOH I . L 9 HOH 2 1391 109 HOH HOH I . L 9 HOH 3 1392 153 HOH HOH I . L 9 HOH 4 1393 177 HOH HOH I . L 9 HOH 5 1394 184 HOH HOH I . L 9 HOH 6 1395 192 HOH HOH I . L 9 HOH 7 1396 205 HOH HOH I . L 9 HOH 8 1397 248 HOH HOH I . L 9 HOH 9 1398 268 HOH HOH I . L 9 HOH 10 1399 303 HOH HOH I . L 9 HOH 11 1400 335 HOH HOH I . L 9 HOH 12 1401 374 HOH HOH I . # _pdbx_molecule_features.prd_id PRD_000802 _pdbx_molecule_features.name 'D-PHENYLALANYL-N-[(1-METHYLPYRIDINIUM-2-YL)METHYL]-L-PROLINAMIDE' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class 'Thrombin inhibitor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000802 _pdbx_molecule.asym_id E # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B ASN 53 H ASN 60 G ASN 'GLYCOSYLATION SITE' 2 C TYS 11 I TYS 63 ? TYR O-SULFO-L-TYROSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4340 ? 1 MORE -38 ? 1 'SSA (A^2)' 12880 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 H ARG 75 ? B ARG 70 2 1 H HOH 1091 ? K HOH . 3 1 H HOH 1110 ? K HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-20 2 'Structure model' 1 1 2012-12-12 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2023-11-01 5 'Structure model' 1 4 2023-12-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Structure summary' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Refinement description' 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' entity 3 3 'Structure model' pdbx_chem_comp_identifier 4 3 'Structure model' pdbx_entity_nonpoly 5 3 'Structure model' pdbx_struct_special_symmetry 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site 8 3 'Structure model' struct_site_gen 9 4 'Structure model' chem_comp 10 4 'Structure model' chem_comp_atom 11 4 'Structure model' chem_comp_bond 12 4 'Structure model' database_2 13 4 'Structure model' pdbx_initial_refinement_model 14 5 'Structure model' chem_comp_atom 15 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_chem_comp.type' 3 3 'Structure model' '_entity.pdbx_description' 4 3 'Structure model' '_pdbx_entity_nonpoly.name' 5 3 'Structure model' '_struct_conn.pdbx_dist_value' 6 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 3 'Structure model' '_struct_conn.pdbx_ptnr1_PDB_ins_code' 8 3 'Structure model' '_struct_conn.pdbx_ptnr2_PDB_ins_code' 9 3 'Structure model' '_struct_conn.pdbx_role' 10 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 11 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 12 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 13 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 14 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 15 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 16 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 17 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 18 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 19 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 20 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 21 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 23 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 24 4 'Structure model' '_chem_comp.pdbx_synonyms' 25 4 'Structure model' '_database_2.pdbx_DOI' 26 4 'Structure model' '_database_2.pdbx_database_accession' 27 5 'Structure model' '_chem_comp_atom.atom_id' 28 5 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7_650)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE L 7 ? ? -129.25 -89.27 2 1 TYR H 60 A ? -153.63 84.11 3 1 ASN H 60 G ? -157.67 79.75 4 1 HIS H 71 ? ? -131.63 -61.20 5 1 ILE H 79 ? ? -126.98 -61.13 6 1 SER H 195 ? ? -39.44 136.42 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 L GLU 1 C CG ? A GLU 6 CG 2 1 Y 1 L GLU 1 C CD ? A GLU 6 CD 3 1 Y 1 L GLU 1 C OE1 ? A GLU 6 OE1 4 1 Y 1 L GLU 1 C OE2 ? A GLU 6 OE2 5 1 Y 1 H SER 36 A OG ? B SER 22 OG 6 1 Y 1 H ASP 186 A CG ? B ASP 193 CG 7 1 Y 1 H ASP 186 A OD1 ? B ASP 193 OD1 8 1 Y 1 H ASP 186 A OD2 ? B ASP 193 OD2 9 1 Y 1 H LYS 236 ? CG ? B LYS 248 CG 10 1 Y 1 H LYS 236 ? CD ? B LYS 248 CD 11 1 Y 1 H LYS 236 ? CE ? B LYS 248 CE 12 1 Y 1 H LYS 236 ? NZ ? B LYS 248 NZ 13 1 Y 1 I ASP 55 ? CG ? C ASP 3 CG 14 1 Y 1 I ASP 55 ? OD1 ? C ASP 3 OD1 15 1 Y 1 I ASP 55 ? OD2 ? C ASP 3 OD2 16 1 Y 1 I GLU 58 ? CG ? C GLU 6 CG 17 1 Y 1 I GLU 58 ? CD ? C GLU 6 CD 18 1 Y 1 I GLU 58 ? OE1 ? C GLU 6 OE1 19 1 Y 1 I GLU 58 ? OE2 ? C GLU 6 OE2 20 1 Y 1 I GLU 61 ? CG ? C GLU 9 CG 21 1 Y 1 I GLU 61 ? CD ? C GLU 9 CD 22 1 Y 1 I GLU 61 ? OE1 ? C GLU 9 OE1 23 1 Y 1 I GLU 61 ? OE2 ? C GLU 9 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L THR 1 H A THR 1 2 1 Y 1 L PHE 1 G A PHE 2 3 1 Y 1 L GLY 1 F A GLY 3 4 1 Y 1 L SER 1 E A SER 4 5 1 Y 1 L GLY 1 D A GLY 5 6 1 Y 1 L ASP 14 L A ASP 34 7 1 Y 1 L GLY 14 M A GLY 35 8 1 Y 1 L ARG 15 ? A ARG 36 9 1 Y 1 H TRP 148 ? B TRP 148 10 1 Y 1 H THR 149 ? B THR 149 11 1 Y 1 H ALA 149 A B ALA 150 12 1 Y 1 H ASN 149 B B ASN 151 13 1 Y 1 H VAL 149 C B VAL 152 14 1 Y 1 H GLY 149 D B GLY 153 15 1 Y 1 H LYS 149 E B LYS 154 16 1 Y 1 H GLU 247 ? B GLU 259 17 1 Y 1 I ASN 53 ? C ASN 1 18 1 Y 1 I GLY 54 ? C GLY 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 B04 N4 N N N 74 B04 C3 C N R 75 B04 C5 C N N 76 B04 O7 O N N 77 B04 C2 C N N 78 B04 C1 C Y N 79 B04 C8 C Y N 80 B04 C12 C Y N 81 B04 C9 C Y N 82 B04 C11 C Y N 83 B04 C10 C Y N 84 B04 N6 N N N 85 B04 C13 C N S 86 B04 C14 C N N 87 B04 O15 O N N 88 B04 C19 C N N 89 B04 C20 C N N 90 B04 C21 C N N 91 B04 N16 N N N 92 B04 C17 C N N 93 B04 C18 C Y N 94 B04 C22 C Y N 95 B04 C23 C Y N 96 B04 C24 C Y N 97 B04 C25 C Y N 98 B04 N26 N Y N 99 B04 C27 C N N 100 B04 HN4 H N N 101 B04 HN4A H N N 102 B04 H3 H N N 103 B04 H2 H N N 104 B04 H2A H N N 105 B04 H8 H N N 106 B04 H12 H N N 107 B04 H9 H N N 108 B04 H11 H N N 109 B04 H10 H N N 110 B04 H13 H N N 111 B04 H19 H N N 112 B04 H19A H N N 113 B04 H20 H N N 114 B04 H20A H N N 115 B04 H21 H N N 116 B04 H21A H N N 117 B04 HN16 H N N 118 B04 H17 H N N 119 B04 H17A H N N 120 B04 H22 H N N 121 B04 H23 H N N 122 B04 H24 H N N 123 B04 H25 H N N 124 B04 H27 H N N 125 B04 H27A H N N 126 B04 H27B H N N 127 CYS N N N N 128 CYS CA C N R 129 CYS C C N N 130 CYS O O N N 131 CYS CB C N N 132 CYS SG S N N 133 CYS OXT O N N 134 CYS H H N N 135 CYS H2 H N N 136 CYS HA H N N 137 CYS HB2 H N N 138 CYS HB3 H N N 139 CYS HG H N N 140 CYS HXT H N N 141 GLN N N N N 142 GLN CA C N S 143 GLN C C N N 144 GLN O O N N 145 GLN CB C N N 146 GLN CG C N N 147 GLN CD C N N 148 GLN OE1 O N N 149 GLN NE2 N N N 150 GLN OXT O N N 151 GLN H H N N 152 GLN H2 H N N 153 GLN HA H N N 154 GLN HB2 H N N 155 GLN HB3 H N N 156 GLN HG2 H N N 157 GLN HG3 H N N 158 GLN HE21 H N N 159 GLN HE22 H N N 160 GLN HXT H N N 161 GLU N N N N 162 GLU CA C N S 163 GLU C C N N 164 GLU O O N N 165 GLU CB C N N 166 GLU CG C N N 167 GLU CD C N N 168 GLU OE1 O N N 169 GLU OE2 O N N 170 GLU OXT O N N 171 GLU H H N N 172 GLU H2 H N N 173 GLU HA H N N 174 GLU HB2 H N N 175 GLU HB3 H N N 176 GLU HG2 H N N 177 GLU HG3 H N N 178 GLU HE2 H N N 179 GLU HXT H N N 180 GLY N N N N 181 GLY CA C N N 182 GLY C C N N 183 GLY O O N N 184 GLY OXT O N N 185 GLY H H N N 186 GLY H2 H N N 187 GLY HA2 H N N 188 GLY HA3 H N N 189 GLY HXT H N N 190 GOL C1 C N N 191 GOL O1 O N N 192 GOL C2 C N N 193 GOL O2 O N N 194 GOL C3 C N N 195 GOL O3 O N N 196 GOL H11 H N N 197 GOL H12 H N N 198 GOL HO1 H N N 199 GOL H2 H N N 200 GOL HO2 H N N 201 GOL H31 H N N 202 GOL H32 H N N 203 GOL HO3 H N N 204 HIS N N N N 205 HIS CA C N S 206 HIS C C N N 207 HIS O O N N 208 HIS CB C N N 209 HIS CG C Y N 210 HIS ND1 N Y N 211 HIS CD2 C Y N 212 HIS CE1 C Y N 213 HIS NE2 N Y N 214 HIS OXT O N N 215 HIS H H N N 216 HIS H2 H N N 217 HIS HA H N N 218 HIS HB2 H N N 219 HIS HB3 H N N 220 HIS HD1 H N N 221 HIS HD2 H N N 222 HIS HE1 H N N 223 HIS HE2 H N N 224 HIS HXT H N N 225 HOH O O N N 226 HOH H1 H N N 227 HOH H2 H N N 228 ILE N N N N 229 ILE CA C N S 230 ILE C C N N 231 ILE O O N N 232 ILE CB C N S 233 ILE CG1 C N N 234 ILE CG2 C N N 235 ILE CD1 C N N 236 ILE OXT O N N 237 ILE H H N N 238 ILE H2 H N N 239 ILE HA H N N 240 ILE HB H N N 241 ILE HG12 H N N 242 ILE HG13 H N N 243 ILE HG21 H N N 244 ILE HG22 H N N 245 ILE HG23 H N N 246 ILE HD11 H N N 247 ILE HD12 H N N 248 ILE HD13 H N N 249 ILE HXT H N N 250 LEU N N N N 251 LEU CA C N S 252 LEU C C N N 253 LEU O O N N 254 LEU CB C N N 255 LEU CG C N N 256 LEU CD1 C N N 257 LEU CD2 C N N 258 LEU OXT O N N 259 LEU H H N N 260 LEU H2 H N N 261 LEU HA H N N 262 LEU HB2 H N N 263 LEU HB3 H N N 264 LEU HG H N N 265 LEU HD11 H N N 266 LEU HD12 H N N 267 LEU HD13 H N N 268 LEU HD21 H N N 269 LEU HD22 H N N 270 LEU HD23 H N N 271 LEU HXT H N N 272 LYS N N N N 273 LYS CA C N S 274 LYS C C N N 275 LYS O O N N 276 LYS CB C N N 277 LYS CG C N N 278 LYS CD C N N 279 LYS CE C N N 280 LYS NZ N N N 281 LYS OXT O N N 282 LYS H H N N 283 LYS H2 H N N 284 LYS HA H N N 285 LYS HB2 H N N 286 LYS HB3 H N N 287 LYS HG2 H N N 288 LYS HG3 H N N 289 LYS HD2 H N N 290 LYS HD3 H N N 291 LYS HE2 H N N 292 LYS HE3 H N N 293 LYS HZ1 H N N 294 LYS HZ2 H N N 295 LYS HZ3 H N N 296 LYS HXT H N N 297 MET N N N N 298 MET CA C N S 299 MET C C N N 300 MET O O N N 301 MET CB C N N 302 MET CG C N N 303 MET SD S N N 304 MET CE C N N 305 MET OXT O N N 306 MET H H N N 307 MET H2 H N N 308 MET HA H N N 309 MET HB2 H N N 310 MET HB3 H N N 311 MET HG2 H N N 312 MET HG3 H N N 313 MET HE1 H N N 314 MET HE2 H N N 315 MET HE3 H N N 316 MET HXT H N N 317 NA NA NA N N 318 NAG C1 C N R 319 NAG C2 C N R 320 NAG C3 C N R 321 NAG C4 C N S 322 NAG C5 C N R 323 NAG C6 C N N 324 NAG C7 C N N 325 NAG C8 C N N 326 NAG N2 N N N 327 NAG O1 O N N 328 NAG O3 O N N 329 NAG O4 O N N 330 NAG O5 O N N 331 NAG O6 O N N 332 NAG O7 O N N 333 NAG H1 H N N 334 NAG H2 H N N 335 NAG H3 H N N 336 NAG H4 H N N 337 NAG H5 H N N 338 NAG H61 H N N 339 NAG H62 H N N 340 NAG H81 H N N 341 NAG H82 H N N 342 NAG H83 H N N 343 NAG HN2 H N N 344 NAG HO1 H N N 345 NAG HO3 H N N 346 NAG HO4 H N N 347 NAG HO6 H N N 348 PHE N N N N 349 PHE CA C N S 350 PHE C C N N 351 PHE O O N N 352 PHE CB C N N 353 PHE CG C Y N 354 PHE CD1 C Y N 355 PHE CD2 C Y N 356 PHE CE1 C Y N 357 PHE CE2 C Y N 358 PHE CZ C Y N 359 PHE OXT O N N 360 PHE H H N N 361 PHE H2 H N N 362 PHE HA H N N 363 PHE HB2 H N N 364 PHE HB3 H N N 365 PHE HD1 H N N 366 PHE HD2 H N N 367 PHE HE1 H N N 368 PHE HE2 H N N 369 PHE HZ H N N 370 PHE HXT H N N 371 PO4 P P N N 372 PO4 O1 O N N 373 PO4 O2 O N N 374 PO4 O3 O N N 375 PO4 O4 O N N 376 PRO N N N N 377 PRO CA C N S 378 PRO C C N N 379 PRO O O N N 380 PRO CB C N N 381 PRO CG C N N 382 PRO CD C N N 383 PRO OXT O N N 384 PRO H H N N 385 PRO HA H N N 386 PRO HB2 H N N 387 PRO HB3 H N N 388 PRO HG2 H N N 389 PRO HG3 H N N 390 PRO HD2 H N N 391 PRO HD3 H N N 392 PRO HXT H N N 393 SER N N N N 394 SER CA C N S 395 SER C C N N 396 SER O O N N 397 SER CB C N N 398 SER OG O N N 399 SER OXT O N N 400 SER H H N N 401 SER H2 H N N 402 SER HA H N N 403 SER HB2 H N N 404 SER HB3 H N N 405 SER HG H N N 406 SER HXT H N N 407 THR N N N N 408 THR CA C N S 409 THR C C N N 410 THR O O N N 411 THR CB C N R 412 THR OG1 O N N 413 THR CG2 C N N 414 THR OXT O N N 415 THR H H N N 416 THR H2 H N N 417 THR HA H N N 418 THR HB H N N 419 THR HG1 H N N 420 THR HG21 H N N 421 THR HG22 H N N 422 THR HG23 H N N 423 THR HXT H N N 424 TRP N N N N 425 TRP CA C N S 426 TRP C C N N 427 TRP O O N N 428 TRP CB C N N 429 TRP CG C Y N 430 TRP CD1 C Y N 431 TRP CD2 C Y N 432 TRP NE1 N Y N 433 TRP CE2 C Y N 434 TRP CE3 C Y N 435 TRP CZ2 C Y N 436 TRP CZ3 C Y N 437 TRP CH2 C Y N 438 TRP OXT O N N 439 TRP H H N N 440 TRP H2 H N N 441 TRP HA H N N 442 TRP HB2 H N N 443 TRP HB3 H N N 444 TRP HD1 H N N 445 TRP HE1 H N N 446 TRP HE3 H N N 447 TRP HZ2 H N N 448 TRP HZ3 H N N 449 TRP HH2 H N N 450 TRP HXT H N N 451 TYR N N N N 452 TYR CA C N S 453 TYR C C N N 454 TYR O O N N 455 TYR CB C N N 456 TYR CG C Y N 457 TYR CD1 C Y N 458 TYR CD2 C Y N 459 TYR CE1 C Y N 460 TYR CE2 C Y N 461 TYR CZ C Y N 462 TYR OH O N N 463 TYR OXT O N N 464 TYR H H N N 465 TYR H2 H N N 466 TYR HA H N N 467 TYR HB2 H N N 468 TYR HB3 H N N 469 TYR HD1 H N N 470 TYR HD2 H N N 471 TYR HE1 H N N 472 TYR HE2 H N N 473 TYR HH H N N 474 TYR HXT H N N 475 TYS N N N N 476 TYS CA C N S 477 TYS CB C N N 478 TYS CG C Y N 479 TYS CD1 C Y N 480 TYS CD2 C Y N 481 TYS CE1 C Y N 482 TYS CE2 C Y N 483 TYS CZ C Y N 484 TYS OH O N N 485 TYS S S N N 486 TYS O1 O N N 487 TYS O2 O N N 488 TYS O3 O N N 489 TYS C C N N 490 TYS O O N N 491 TYS OXT O N N 492 TYS H H N N 493 TYS H2 H N N 494 TYS HA H N N 495 TYS HB2 H N N 496 TYS HB3 H N N 497 TYS HD1 H N N 498 TYS HD2 H N N 499 TYS HE1 H N N 500 TYS HE2 H N N 501 TYS HO3 H N N 502 TYS HXT H N N 503 VAL N N N N 504 VAL CA C N S 505 VAL C C N N 506 VAL O O N N 507 VAL CB C N N 508 VAL CG1 C N N 509 VAL CG2 C N N 510 VAL OXT O N N 511 VAL H H N N 512 VAL H2 H N N 513 VAL HA H N N 514 VAL HB H N N 515 VAL HG11 H N N 516 VAL HG12 H N N 517 VAL HG13 H N N 518 VAL HG21 H N N 519 VAL HG22 H N N 520 VAL HG23 H N N 521 VAL HXT H N N 522 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 B04 C1 C2 sing N N 70 B04 C1 C8 doub Y N 71 B04 C1 C12 sing Y N 72 B04 C2 C3 sing N N 73 B04 C3 N4 sing N N 74 B04 C3 C5 sing N N 75 B04 C5 N6 sing N N 76 B04 C5 O7 doub N N 77 B04 N6 C13 sing N N 78 B04 N6 C21 sing N N 79 B04 C8 C9 sing Y N 80 B04 C9 C10 doub Y N 81 B04 C10 C11 sing Y N 82 B04 C11 C12 doub Y N 83 B04 C13 C14 sing N N 84 B04 C13 C19 sing N N 85 B04 C14 O15 doub N N 86 B04 C14 N16 sing N N 87 B04 N16 C17 sing N N 88 B04 C17 C18 sing N N 89 B04 C18 C22 doub Y N 90 B04 C18 N26 sing Y N 91 B04 C19 C20 sing N N 92 B04 C20 C21 sing N N 93 B04 C22 C23 sing Y N 94 B04 C23 C24 doub Y N 95 B04 C24 C25 sing Y N 96 B04 C25 N26 doub Y N 97 B04 N26 C27 sing N N 98 B04 C2 H2 sing N N 99 B04 C2 H2A sing N N 100 B04 C3 H3 sing N N 101 B04 N4 HN4 sing N N 102 B04 N4 HN4A sing N N 103 B04 C8 H8 sing N N 104 B04 C9 H9 sing N N 105 B04 C10 H10 sing N N 106 B04 C11 H11 sing N N 107 B04 C12 H12 sing N N 108 B04 C13 H13 sing N N 109 B04 N16 HN16 sing N N 110 B04 C17 H17 sing N N 111 B04 C17 H17A sing N N 112 B04 C19 H19 sing N N 113 B04 C19 H19A sing N N 114 B04 C20 H20 sing N N 115 B04 C20 H20A sing N N 116 B04 C21 H21 sing N N 117 B04 C21 H21A sing N N 118 B04 C22 H22 sing N N 119 B04 C23 H23 sing N N 120 B04 C24 H24 sing N N 121 B04 C25 H25 sing N N 122 B04 C27 H27 sing N N 123 B04 C27 H27A sing N N 124 B04 C27 H27B sing N N 125 CYS N CA sing N N 126 CYS N H sing N N 127 CYS N H2 sing N N 128 CYS CA C sing N N 129 CYS CA CB sing N N 130 CYS CA HA sing N N 131 CYS C O doub N N 132 CYS C OXT sing N N 133 CYS CB SG sing N N 134 CYS CB HB2 sing N N 135 CYS CB HB3 sing N N 136 CYS SG HG sing N N 137 CYS OXT HXT sing N N 138 GLN N CA sing N N 139 GLN N H sing N N 140 GLN N H2 sing N N 141 GLN CA C sing N N 142 GLN CA CB sing N N 143 GLN CA HA sing N N 144 GLN C O doub N N 145 GLN C OXT sing N N 146 GLN CB CG sing N N 147 GLN CB HB2 sing N N 148 GLN CB HB3 sing N N 149 GLN CG CD sing N N 150 GLN CG HG2 sing N N 151 GLN CG HG3 sing N N 152 GLN CD OE1 doub N N 153 GLN CD NE2 sing N N 154 GLN NE2 HE21 sing N N 155 GLN NE2 HE22 sing N N 156 GLN OXT HXT sing N N 157 GLU N CA sing N N 158 GLU N H sing N N 159 GLU N H2 sing N N 160 GLU CA C sing N N 161 GLU CA CB sing N N 162 GLU CA HA sing N N 163 GLU C O doub N N 164 GLU C OXT sing N N 165 GLU CB CG sing N N 166 GLU CB HB2 sing N N 167 GLU CB HB3 sing N N 168 GLU CG CD sing N N 169 GLU CG HG2 sing N N 170 GLU CG HG3 sing N N 171 GLU CD OE1 doub N N 172 GLU CD OE2 sing N N 173 GLU OE2 HE2 sing N N 174 GLU OXT HXT sing N N 175 GLY N CA sing N N 176 GLY N H sing N N 177 GLY N H2 sing N N 178 GLY CA C sing N N 179 GLY CA HA2 sing N N 180 GLY CA HA3 sing N N 181 GLY C O doub N N 182 GLY C OXT sing N N 183 GLY OXT HXT sing N N 184 GOL C1 O1 sing N N 185 GOL C1 C2 sing N N 186 GOL C1 H11 sing N N 187 GOL C1 H12 sing N N 188 GOL O1 HO1 sing N N 189 GOL C2 O2 sing N N 190 GOL C2 C3 sing N N 191 GOL C2 H2 sing N N 192 GOL O2 HO2 sing N N 193 GOL C3 O3 sing N N 194 GOL C3 H31 sing N N 195 GOL C3 H32 sing N N 196 GOL O3 HO3 sing N N 197 HIS N CA sing N N 198 HIS N H sing N N 199 HIS N H2 sing N N 200 HIS CA C sing N N 201 HIS CA CB sing N N 202 HIS CA HA sing N N 203 HIS C O doub N N 204 HIS C OXT sing N N 205 HIS CB CG sing N N 206 HIS CB HB2 sing N N 207 HIS CB HB3 sing N N 208 HIS CG ND1 sing Y N 209 HIS CG CD2 doub Y N 210 HIS ND1 CE1 doub Y N 211 HIS ND1 HD1 sing N N 212 HIS CD2 NE2 sing Y N 213 HIS CD2 HD2 sing N N 214 HIS CE1 NE2 sing Y N 215 HIS CE1 HE1 sing N N 216 HIS NE2 HE2 sing N N 217 HIS OXT HXT sing N N 218 HOH O H1 sing N N 219 HOH O H2 sing N N 220 ILE N CA sing N N 221 ILE N H sing N N 222 ILE N H2 sing N N 223 ILE CA C sing N N 224 ILE CA CB sing N N 225 ILE CA HA sing N N 226 ILE C O doub N N 227 ILE C OXT sing N N 228 ILE CB CG1 sing N N 229 ILE CB CG2 sing N N 230 ILE CB HB sing N N 231 ILE CG1 CD1 sing N N 232 ILE CG1 HG12 sing N N 233 ILE CG1 HG13 sing N N 234 ILE CG2 HG21 sing N N 235 ILE CG2 HG22 sing N N 236 ILE CG2 HG23 sing N N 237 ILE CD1 HD11 sing N N 238 ILE CD1 HD12 sing N N 239 ILE CD1 HD13 sing N N 240 ILE OXT HXT sing N N 241 LEU N CA sing N N 242 LEU N H sing N N 243 LEU N H2 sing N N 244 LEU CA C sing N N 245 LEU CA CB sing N N 246 LEU CA HA sing N N 247 LEU C O doub N N 248 LEU C OXT sing N N 249 LEU CB CG sing N N 250 LEU CB HB2 sing N N 251 LEU CB HB3 sing N N 252 LEU CG CD1 sing N N 253 LEU CG CD2 sing N N 254 LEU CG HG sing N N 255 LEU CD1 HD11 sing N N 256 LEU CD1 HD12 sing N N 257 LEU CD1 HD13 sing N N 258 LEU CD2 HD21 sing N N 259 LEU CD2 HD22 sing N N 260 LEU CD2 HD23 sing N N 261 LEU OXT HXT sing N N 262 LYS N CA sing N N 263 LYS N H sing N N 264 LYS N H2 sing N N 265 LYS CA C sing N N 266 LYS CA CB sing N N 267 LYS CA HA sing N N 268 LYS C O doub N N 269 LYS C OXT sing N N 270 LYS CB CG sing N N 271 LYS CB HB2 sing N N 272 LYS CB HB3 sing N N 273 LYS CG CD sing N N 274 LYS CG HG2 sing N N 275 LYS CG HG3 sing N N 276 LYS CD CE sing N N 277 LYS CD HD2 sing N N 278 LYS CD HD3 sing N N 279 LYS CE NZ sing N N 280 LYS CE HE2 sing N N 281 LYS CE HE3 sing N N 282 LYS NZ HZ1 sing N N 283 LYS NZ HZ2 sing N N 284 LYS NZ HZ3 sing N N 285 LYS OXT HXT sing N N 286 MET N CA sing N N 287 MET N H sing N N 288 MET N H2 sing N N 289 MET CA C sing N N 290 MET CA CB sing N N 291 MET CA HA sing N N 292 MET C O doub N N 293 MET C OXT sing N N 294 MET CB CG sing N N 295 MET CB HB2 sing N N 296 MET CB HB3 sing N N 297 MET CG SD sing N N 298 MET CG HG2 sing N N 299 MET CG HG3 sing N N 300 MET SD CE sing N N 301 MET CE HE1 sing N N 302 MET CE HE2 sing N N 303 MET CE HE3 sing N N 304 MET OXT HXT sing N N 305 NAG C1 C2 sing N N 306 NAG C1 O1 sing N N 307 NAG C1 O5 sing N N 308 NAG C1 H1 sing N N 309 NAG C2 C3 sing N N 310 NAG C2 N2 sing N N 311 NAG C2 H2 sing N N 312 NAG C3 C4 sing N N 313 NAG C3 O3 sing N N 314 NAG C3 H3 sing N N 315 NAG C4 C5 sing N N 316 NAG C4 O4 sing N N 317 NAG C4 H4 sing N N 318 NAG C5 C6 sing N N 319 NAG C5 O5 sing N N 320 NAG C5 H5 sing N N 321 NAG C6 O6 sing N N 322 NAG C6 H61 sing N N 323 NAG C6 H62 sing N N 324 NAG C7 C8 sing N N 325 NAG C7 N2 sing N N 326 NAG C7 O7 doub N N 327 NAG C8 H81 sing N N 328 NAG C8 H82 sing N N 329 NAG C8 H83 sing N N 330 NAG N2 HN2 sing N N 331 NAG O1 HO1 sing N N 332 NAG O3 HO3 sing N N 333 NAG O4 HO4 sing N N 334 NAG O6 HO6 sing N N 335 PHE N CA sing N N 336 PHE N H sing N N 337 PHE N H2 sing N N 338 PHE CA C sing N N 339 PHE CA CB sing N N 340 PHE CA HA sing N N 341 PHE C O doub N N 342 PHE C OXT sing N N 343 PHE CB CG sing N N 344 PHE CB HB2 sing N N 345 PHE CB HB3 sing N N 346 PHE CG CD1 doub Y N 347 PHE CG CD2 sing Y N 348 PHE CD1 CE1 sing Y N 349 PHE CD1 HD1 sing N N 350 PHE CD2 CE2 doub Y N 351 PHE CD2 HD2 sing N N 352 PHE CE1 CZ doub Y N 353 PHE CE1 HE1 sing N N 354 PHE CE2 CZ sing Y N 355 PHE CE2 HE2 sing N N 356 PHE CZ HZ sing N N 357 PHE OXT HXT sing N N 358 PO4 P O1 doub N N 359 PO4 P O2 sing N N 360 PO4 P O3 sing N N 361 PO4 P O4 sing N N 362 PRO N CA sing N N 363 PRO N CD sing N N 364 PRO N H sing N N 365 PRO CA C sing N N 366 PRO CA CB sing N N 367 PRO CA HA sing N N 368 PRO C O doub N N 369 PRO C OXT sing N N 370 PRO CB CG sing N N 371 PRO CB HB2 sing N N 372 PRO CB HB3 sing N N 373 PRO CG CD sing N N 374 PRO CG HG2 sing N N 375 PRO CG HG3 sing N N 376 PRO CD HD2 sing N N 377 PRO CD HD3 sing N N 378 PRO OXT HXT sing N N 379 SER N CA sing N N 380 SER N H sing N N 381 SER N H2 sing N N 382 SER CA C sing N N 383 SER CA CB sing N N 384 SER CA HA sing N N 385 SER C O doub N N 386 SER C OXT sing N N 387 SER CB OG sing N N 388 SER CB HB2 sing N N 389 SER CB HB3 sing N N 390 SER OG HG sing N N 391 SER OXT HXT sing N N 392 THR N CA sing N N 393 THR N H sing N N 394 THR N H2 sing N N 395 THR CA C sing N N 396 THR CA CB sing N N 397 THR CA HA sing N N 398 THR C O doub N N 399 THR C OXT sing N N 400 THR CB OG1 sing N N 401 THR CB CG2 sing N N 402 THR CB HB sing N N 403 THR OG1 HG1 sing N N 404 THR CG2 HG21 sing N N 405 THR CG2 HG22 sing N N 406 THR CG2 HG23 sing N N 407 THR OXT HXT sing N N 408 TRP N CA sing N N 409 TRP N H sing N N 410 TRP N H2 sing N N 411 TRP CA C sing N N 412 TRP CA CB sing N N 413 TRP CA HA sing N N 414 TRP C O doub N N 415 TRP C OXT sing N N 416 TRP CB CG sing N N 417 TRP CB HB2 sing N N 418 TRP CB HB3 sing N N 419 TRP CG CD1 doub Y N 420 TRP CG CD2 sing Y N 421 TRP CD1 NE1 sing Y N 422 TRP CD1 HD1 sing N N 423 TRP CD2 CE2 doub Y N 424 TRP CD2 CE3 sing Y N 425 TRP NE1 CE2 sing Y N 426 TRP NE1 HE1 sing N N 427 TRP CE2 CZ2 sing Y N 428 TRP CE3 CZ3 doub Y N 429 TRP CE3 HE3 sing N N 430 TRP CZ2 CH2 doub Y N 431 TRP CZ2 HZ2 sing N N 432 TRP CZ3 CH2 sing Y N 433 TRP CZ3 HZ3 sing N N 434 TRP CH2 HH2 sing N N 435 TRP OXT HXT sing N N 436 TYR N CA sing N N 437 TYR N H sing N N 438 TYR N H2 sing N N 439 TYR CA C sing N N 440 TYR CA CB sing N N 441 TYR CA HA sing N N 442 TYR C O doub N N 443 TYR C OXT sing N N 444 TYR CB CG sing N N 445 TYR CB HB2 sing N N 446 TYR CB HB3 sing N N 447 TYR CG CD1 doub Y N 448 TYR CG CD2 sing Y N 449 TYR CD1 CE1 sing Y N 450 TYR CD1 HD1 sing N N 451 TYR CD2 CE2 doub Y N 452 TYR CD2 HD2 sing N N 453 TYR CE1 CZ doub Y N 454 TYR CE1 HE1 sing N N 455 TYR CE2 CZ sing Y N 456 TYR CE2 HE2 sing N N 457 TYR CZ OH sing N N 458 TYR OH HH sing N N 459 TYR OXT HXT sing N N 460 TYS N CA sing N N 461 TYS N H sing N N 462 TYS N H2 sing N N 463 TYS CA CB sing N N 464 TYS CA C sing N N 465 TYS CA HA sing N N 466 TYS CB CG sing N N 467 TYS CB HB2 sing N N 468 TYS CB HB3 sing N N 469 TYS CG CD1 doub Y N 470 TYS CG CD2 sing Y N 471 TYS CD1 CE1 sing Y N 472 TYS CD1 HD1 sing N N 473 TYS CD2 CE2 doub Y N 474 TYS CD2 HD2 sing N N 475 TYS CE1 CZ doub Y N 476 TYS CE1 HE1 sing N N 477 TYS CE2 CZ sing Y N 478 TYS CE2 HE2 sing N N 479 TYS CZ OH sing N N 480 TYS OH S sing N N 481 TYS S O1 doub N N 482 TYS S O2 doub N N 483 TYS S O3 sing N N 484 TYS O3 HO3 sing N N 485 TYS C O doub N N 486 TYS C OXT sing N N 487 TYS OXT HXT sing N N 488 VAL N CA sing N N 489 VAL N H sing N N 490 VAL N H2 sing N N 491 VAL CA C sing N N 492 VAL CA CB sing N N 493 VAL CA HA sing N N 494 VAL C O doub N N 495 VAL C OXT sing N N 496 VAL CB CG1 sing N N 497 VAL CB CG2 sing N N 498 VAL CB HB sing N N 499 VAL CG1 HG11 sing N N 500 VAL CG1 HG12 sing N N 501 VAL CG1 HG13 sing N N 502 VAL CG2 HG21 sing N N 503 VAL CG2 HG22 sing N N 504 VAL CG2 HG23 sing N N 505 VAL OXT HXT sing N N 506 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 'D-phenylalanyl-N-[(1-methylpyridinium-2-yl)methyl]-L-prolinamide' B04 6 'PHOSPHATE ION' PO4 7 GLYCEROL GOL 8 'SODIUM ION' NA 9 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1H8D _pdbx_initial_refinement_model.details ? #