data_3SIT # _entry.id 3SIT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3SIT pdb_00003sit 10.2210/pdb3sit/pdb RCSB RCSB066253 ? ? WWPDB D_1000066253 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2I2S 'Rotavirus CRW-8 VP8* in complex with monosaccharide aMeNeu5Ac' unspecified PDB 3SIS 'Porcine CRW-8 Rotavirus VP8* in complex with aceramido-GM3_Gc' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3SIT _pdbx_database_status.recvd_initial_deposition_date 2011-06-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Blanchard, H.' 1 'Yu, X.' 2 # _citation.id primary _citation.title 'Novel structural insights into rotavirus recognition of ganglioside glycan receptors.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 413 _citation.page_first 929 _citation.page_last 939 _citation.year 2011 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21945555 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2011.09.005 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yu, X.' 1 ? primary 'Coulson, B.S.' 2 ? primary 'Fleming, F.E.' 3 ? primary 'Dyason, J.C.' 4 ? primary 'von Itzstein, M.' 5 ? primary 'Blanchard, H.' 6 ? # _cell.entry_id 3SIT _cell.length_a 56.777 _cell.length_b 57.357 _cell.length_c 113.129 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3SIT _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Outer capsid protein VP4' 18459.516 2 ? yes 'Outer capsid protein VP8* (UNP residues 64-224)' ? 2 branched man 'N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose' 633.552 2 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 4 non-polymer syn '(4R)-2-METHYLPENTANE-2,4-DIOL' 118.174 2 ? ? ? ? 5 water nat water 18.015 327 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'VP8* carbohydrate recognition protein' 2 "3'-sialyl-alpha-lactose" # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSLLDGPYQPTTFNPPTSYWILLAPTVEGVVIQGTNNIDRWLATILIEPNVQTTNRIYNLFGQQVTLSVENTSQTQWKFI DVSKTTPTGNYTQHGPLFSTPKLYAVMKFSGRIYTYNGTTPNATTGYYSTTNYDTVNMTSFCDFYIIPRNQEEKCTEYIN HGL ; _entity_poly.pdbx_seq_one_letter_code_can ;GSLLDGPYQPTTFNPPTSYWILLAPTVEGVVIQGTNNIDRWLATILIEPNVQTTNRIYNLFGQQVTLSVENTSQTQWKFI DVSKTTPTGNYTQHGPLFSTPKLYAVMKFSGRIYTYNGTTPNATTGYYSTTNYDTVNMTSFCDFYIIPRNQEEKCTEYIN HGL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 LEU n 1 4 LEU n 1 5 ASP n 1 6 GLY n 1 7 PRO n 1 8 TYR n 1 9 GLN n 1 10 PRO n 1 11 THR n 1 12 THR n 1 13 PHE n 1 14 ASN n 1 15 PRO n 1 16 PRO n 1 17 THR n 1 18 SER n 1 19 TYR n 1 20 TRP n 1 21 ILE n 1 22 LEU n 1 23 LEU n 1 24 ALA n 1 25 PRO n 1 26 THR n 1 27 VAL n 1 28 GLU n 1 29 GLY n 1 30 VAL n 1 31 VAL n 1 32 ILE n 1 33 GLN n 1 34 GLY n 1 35 THR n 1 36 ASN n 1 37 ASN n 1 38 ILE n 1 39 ASP n 1 40 ARG n 1 41 TRP n 1 42 LEU n 1 43 ALA n 1 44 THR n 1 45 ILE n 1 46 LEU n 1 47 ILE n 1 48 GLU n 1 49 PRO n 1 50 ASN n 1 51 VAL n 1 52 GLN n 1 53 THR n 1 54 THR n 1 55 ASN n 1 56 ARG n 1 57 ILE n 1 58 TYR n 1 59 ASN n 1 60 LEU n 1 61 PHE n 1 62 GLY n 1 63 GLN n 1 64 GLN n 1 65 VAL n 1 66 THR n 1 67 LEU n 1 68 SER n 1 69 VAL n 1 70 GLU n 1 71 ASN n 1 72 THR n 1 73 SER n 1 74 GLN n 1 75 THR n 1 76 GLN n 1 77 TRP n 1 78 LYS n 1 79 PHE n 1 80 ILE n 1 81 ASP n 1 82 VAL n 1 83 SER n 1 84 LYS n 1 85 THR n 1 86 THR n 1 87 PRO n 1 88 THR n 1 89 GLY n 1 90 ASN n 1 91 TYR n 1 92 THR n 1 93 GLN n 1 94 HIS n 1 95 GLY n 1 96 PRO n 1 97 LEU n 1 98 PHE n 1 99 SER n 1 100 THR n 1 101 PRO n 1 102 LYS n 1 103 LEU n 1 104 TYR n 1 105 ALA n 1 106 VAL n 1 107 MET n 1 108 LYS n 1 109 PHE n 1 110 SER n 1 111 GLY n 1 112 ARG n 1 113 ILE n 1 114 TYR n 1 115 THR n 1 116 TYR n 1 117 ASN n 1 118 GLY n 1 119 THR n 1 120 THR n 1 121 PRO n 1 122 ASN n 1 123 ALA n 1 124 THR n 1 125 THR n 1 126 GLY n 1 127 TYR n 1 128 TYR n 1 129 SER n 1 130 THR n 1 131 THR n 1 132 ASN n 1 133 TYR n 1 134 ASP n 1 135 THR n 1 136 VAL n 1 137 ASN n 1 138 MET n 1 139 THR n 1 140 SER n 1 141 PHE n 1 142 CYS n 1 143 ASP n 1 144 PHE n 1 145 TYR n 1 146 ILE n 1 147 ILE n 1 148 PRO n 1 149 ARG n 1 150 ASN n 1 151 GLN n 1 152 GLU n 1 153 GLU n 1 154 LYS n 1 155 CYS n 1 156 THR n 1 157 GLU n 1 158 TYR n 1 159 ILE n 1 160 ASN n 1 161 HIS n 1 162 GLY n 1 163 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name RV-A _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain CRW-8 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Porcine rotavirus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 31578 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p-GEX _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VP4_ROTP3 _struct_ref.pdbx_db_accession P0C6Y8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LLDGPYRPTTFNPPTSYWVLLAPTVEGVVIQGTNNIDRWLATILIEPNVQTTNRIYNLFGQQVTLSVENTSQTQWKFIDV SKTTPTGSYTQHGPLFSTPKLYAVMKFSGRIYTYNGTTPNATTGYYSTTNYDTVNMTLFCDFYIIPRNQEEKCTEYINHG L ; _struct_ref.pdbx_align_begin 64 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3SIT A 3 ? 163 ? P0C6Y8 64 ? 224 ? 64 224 2 1 3SIT B 3 ? 163 ? P0C6Y8 64 ? 224 ? 64 224 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3SIT GLY A 1 ? UNP P0C6Y8 ? ? 'expression tag' 62 1 1 3SIT SER A 2 ? UNP P0C6Y8 ? ? 'expression tag' 63 2 1 3SIT GLN A 9 ? UNP P0C6Y8 ARG 70 'engineered mutation' 70 3 1 3SIT ILE A 21 ? UNP P0C6Y8 VAL 82 'engineered mutation' 82 4 1 3SIT ASN A 90 ? UNP P0C6Y8 SER 151 'engineered mutation' 151 5 1 3SIT SER A 140 ? UNP P0C6Y8 LEU 201 'engineered mutation' 201 6 2 3SIT GLY B 1 ? UNP P0C6Y8 ? ? 'expression tag' 62 7 2 3SIT SER B 2 ? UNP P0C6Y8 ? ? 'expression tag' 63 8 2 3SIT GLN B 9 ? UNP P0C6Y8 ARG 70 'engineered mutation' 70 9 2 3SIT ILE B 21 ? UNP P0C6Y8 VAL 82 'engineered mutation' 82 10 2 3SIT ASN B 90 ? UNP P0C6Y8 SER 151 'engineered mutation' 151 11 2 3SIT SER B 140 ? UNP P0C6Y8 LEU 201 'engineered mutation' 201 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MRD non-polymer . '(4R)-2-METHYLPENTANE-2,4-DIOL' ? 'C6 H14 O2' 118.174 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIA 'D-saccharide, alpha linking' . 'N-acetyl-alpha-neuraminic acid' 'N-acetylneuraminic acid; sialic acid; alpha-sialic acid; O-SIALIC ACID' 'C11 H19 N O9' 309.270 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3SIT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_percent_sol 50.70 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '15-20 mg/mL protein, 65-75% MPD, 0.1 M HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2008-07-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97946 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_wavelength 0.97946 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3SIT _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 57.35 _reflns.d_resolution_high 1.8 _reflns.number_obs 35062 _reflns.number_all ? _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.29 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.90 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.384 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_redundancy 7.33 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3SIT _refine.ls_number_reflns_obs 33245 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.35 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.99 _refine.ls_R_factor_obs 0.18550 _refine.ls_R_factor_all 0.19 _refine.ls_R_factor_R_work 0.18400 _refine.ls_R_factor_R_free 0.21292 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1756 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.B_iso_mean 17.266 _refine.aniso_B[1][1] 0.05 _refine.aniso_B[2][2] -0.03 _refine.aniso_B[3][3] -0.02 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY ; _refine.pdbx_starting_model 'PDB ENTRY 2I2S' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.118 _refine.overall_SU_ML 0.076 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.389 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.128 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2598 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 104 _refine_hist.number_atoms_solvent 327 _refine_hist.number_atoms_total 3029 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 40.35 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.006 0.022 ? 2800 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.049 1.995 ? 3868 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.673 5.000 ? 332 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 29.512 24.839 ? 124 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 12.085 15.000 ? 407 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 7.218 15.000 ? 8 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.064 0.200 ? 461 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.004 0.021 ? 2104 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 0.391 1.500 ? 1636 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 0.747 2.000 ? 2710 ? 'X-RAY DIFFRACTION' r_scbond_it 0.971 3.000 ? 1164 ? 'X-RAY DIFFRACTION' r_scangle_it 1.665 4.500 ? 1151 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.number_reflns_R_work 2435 _refine_ls_shell.R_factor_R_work 0.235 _refine_ls_shell.percent_reflns_obs 100.0 _refine_ls_shell.R_factor_R_free 0.260 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 121 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3SIT _struct.title 'Crystal structure of porcine CRW-8 Rotavirus VP8* in complex with aceramido-GM3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3SIT _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN, VIRAL PROTEIN' _struct_keywords.text 'beta sandwich, lectin, GM3, SUGAR BINDING PROTEIN, VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 132 ? VAL A 136 ? ASN A 193 VAL A 197 5 ? 5 HELX_P HELX_P2 2 GLN A 151 ? GLY A 162 ? GLN A 212 GLY A 223 1 ? 12 HELX_P HELX_P3 3 ASN B 132 ? VAL B 136 ? ASN B 193 VAL B 197 5 ? 5 HELX_P HELX_P4 4 GLN B 151 ? GLY B 162 ? GLN B 212 GLY B 223 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C GLC . O4 ? ? ? 1_555 C GAL . C1 ? ? C GLC 1 C GAL 2 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale2 covale both ? C GAL . O3 ? ? ? 1_555 C SIA . C2 ? ? C GAL 2 C SIA 3 1_555 ? ? ? ? ? ? ? 1.435 ? ? covale3 covale both ? D GLC . O4 ? ? ? 1_555 D GAL . C1 ? ? D GLC 1 D GAL 2 1_555 ? ? ? ? ? ? ? 1.437 ? ? covale4 covale both ? D GAL . O3 ? ? ? 1_555 D SIA . C2 ? ? D GAL 2 D SIA 3 1_555 ? ? ? ? ? ? ? 1.441 ? ? metalc1 metalc ? ? A ASP 81 OD2 ? ? ? 1_555 E NA . NA ? ? A ASP 142 A NA 3000 1_555 ? ? ? ? ? ? ? 2.547 ? ? metalc2 metalc ? ? A GLY 95 O ? ? ? 1_555 E NA . NA ? ? A GLY 156 A NA 3000 1_555 ? ? ? ? ? ? ? 2.278 ? ? metalc3 metalc ? ? A TYR 104 OH ? ? ? 1_555 E NA . NA ? ? A TYR 165 A NA 3000 1_555 ? ? ? ? ? ? ? 2.370 ? ? metalc4 metalc ? ? A THR 115 OG1 ? ? ? 1_555 E NA . NA ? ? A THR 176 A NA 3000 1_555 ? ? ? ? ? ? ? 2.821 ? ? metalc5 metalc ? ? A TYR 116 O ? ? ? 1_555 E NA . NA ? ? A TYR 177 A NA 3000 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc6 metalc ? ? I HOH . O ? ? ? 1_555 E NA . NA ? ? A HOH 235 A NA 3000 1_555 ? ? ? ? ? ? ? 2.463 ? ? metalc7 metalc ? ? B ASP 81 OD2 ? ? ? 1_555 G NA . NA ? ? B ASP 142 B NA 3001 1_555 ? ? ? ? ? ? ? 2.515 ? ? metalc8 metalc ? ? B GLY 95 O ? ? ? 1_555 G NA . NA ? ? B GLY 156 B NA 3001 1_555 ? ? ? ? ? ? ? 2.242 ? ? metalc9 metalc ? ? B TYR 104 OH ? ? ? 1_555 G NA . NA ? ? B TYR 165 B NA 3001 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc10 metalc ? ? B THR 115 OG1 ? ? ? 1_555 G NA . NA ? ? B THR 176 B NA 3001 1_555 ? ? ? ? ? ? ? 2.884 ? ? metalc11 metalc ? ? B TYR 116 O ? ? ? 1_555 G NA . NA ? ? B TYR 177 B NA 3001 1_555 ? ? ? ? ? ? ? 2.360 ? ? metalc12 metalc ? ? J HOH . O ? ? ? 1_555 G NA . NA ? ? B HOH 241 B NA 3001 1_555 ? ? ? ? ? ? ? 2.646 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 6 A . ? GLY 67 A PRO 7 A ? PRO 68 A 1 4.60 2 THR 120 A . ? THR 181 A PRO 121 A ? PRO 182 A 1 5.81 3 GLY 6 B . ? GLY 67 B PRO 7 B ? PRO 68 B 1 -1.91 4 THR 120 B . ? THR 181 B PRO 121 B ? PRO 182 B 1 4.94 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 11 ? B ? 6 ? C ? 2 ? D ? 11 ? E ? 6 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel D 5 6 ? parallel D 6 7 ? anti-parallel D 7 8 ? anti-parallel D 8 9 ? anti-parallel D 9 10 ? anti-parallel D 10 11 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel F 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 5 ? TYR A 8 ? ASP A 66 TYR A 69 A 2 PHE A 144 ? PRO A 148 ? PHE A 205 PRO A 209 A 3 TYR A 19 ? LEU A 23 ? TYR A 80 LEU A 84 A 4 TYR A 104 ? PHE A 109 ? TYR A 165 PHE A 170 A 5 ARG A 112 ? THR A 119 ? ARG A 173 THR A 180 A 6 THR A 92 ? SER A 99 ? THR A 153 SER A 160 A 7 TRP A 77 ? LYS A 84 ? TRP A 138 LYS A 145 A 8 TRP A 41 ? ILE A 47 ? TRP A 102 ILE A 108 A 9 GLY A 29 ? THR A 35 ? GLY A 90 THR A 96 A 10 ASN A 137 ? SER A 140 ? ASN A 198 SER A 201 A 11 THR A 12 ? PHE A 13 ? THR A 73 PHE A 74 B 1 ASP A 5 ? TYR A 8 ? ASP A 66 TYR A 69 B 2 PHE A 144 ? PRO A 148 ? PHE A 205 PRO A 209 B 3 TYR A 19 ? LEU A 23 ? TYR A 80 LEU A 84 B 4 TYR A 104 ? PHE A 109 ? TYR A 165 PHE A 170 B 5 ARG A 112 ? THR A 119 ? ARG A 173 THR A 180 B 6 THR A 124 ? SER A 129 ? THR A 185 SER A 190 C 1 VAL A 51 ? LEU A 60 ? VAL A 112 LEU A 121 C 2 GLN A 63 ? ASN A 71 ? GLN A 124 ASN A 132 D 1 ASP B 5 ? TYR B 8 ? ASP B 66 TYR B 69 D 2 ASP B 143 ? PRO B 148 ? ASP B 204 PRO B 209 D 3 TYR B 19 ? ALA B 24 ? TYR B 80 ALA B 85 D 4 TYR B 104 ? PHE B 109 ? TYR B 165 PHE B 170 D 5 ARG B 112 ? THR B 119 ? ARG B 173 THR B 180 D 6 THR B 92 ? SER B 99 ? THR B 153 SER B 160 D 7 TRP B 77 ? LYS B 84 ? TRP B 138 LYS B 145 D 8 TRP B 41 ? ILE B 47 ? TRP B 102 ILE B 108 D 9 GLY B 29 ? THR B 35 ? GLY B 90 THR B 96 D 10 ASN B 137 ? SER B 140 ? ASN B 198 SER B 201 D 11 THR B 11 ? PHE B 13 ? THR B 72 PHE B 74 E 1 ASP B 5 ? TYR B 8 ? ASP B 66 TYR B 69 E 2 ASP B 143 ? PRO B 148 ? ASP B 204 PRO B 209 E 3 TYR B 19 ? ALA B 24 ? TYR B 80 ALA B 85 E 4 TYR B 104 ? PHE B 109 ? TYR B 165 PHE B 170 E 5 ARG B 112 ? THR B 119 ? ARG B 173 THR B 180 E 6 THR B 124 ? SER B 129 ? THR B 185 SER B 190 F 1 VAL B 51 ? LEU B 60 ? VAL B 112 LEU B 121 F 2 GLN B 63 ? ASN B 71 ? GLN B 124 ASN B 132 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 8 ? N TYR A 69 O PHE A 144 ? O PHE A 205 A 2 3 O ILE A 147 ? O ILE A 208 N TRP A 20 ? N TRP A 81 A 3 4 N LEU A 23 ? N LEU A 84 O TYR A 104 ? O TYR A 165 A 4 5 N MET A 107 ? N MET A 168 O TYR A 114 ? O TYR A 175 A 5 6 O GLY A 118 ? O GLY A 179 N PHE A 98 ? N PHE A 159 A 6 7 O SER A 99 ? O SER A 160 N TRP A 77 ? N TRP A 138 A 7 8 O VAL A 82 ? O VAL A 143 N ALA A 43 ? N ALA A 104 A 8 9 O LEU A 42 ? O LEU A 103 N GLY A 34 ? N GLY A 95 A 9 10 N GLN A 33 ? N GLN A 94 O THR A 139 ? O THR A 200 A 10 11 O MET A 138 ? O MET A 199 N PHE A 13 ? N PHE A 74 B 1 2 N TYR A 8 ? N TYR A 69 O PHE A 144 ? O PHE A 205 B 2 3 O ILE A 147 ? O ILE A 208 N TRP A 20 ? N TRP A 81 B 3 4 N LEU A 23 ? N LEU A 84 O TYR A 104 ? O TYR A 165 B 4 5 N MET A 107 ? N MET A 168 O TYR A 114 ? O TYR A 175 B 5 6 N ASN A 117 ? N ASN A 178 O THR A 124 ? O THR A 185 C 1 2 N VAL A 51 ? N VAL A 112 O ASN A 71 ? O ASN A 132 D 1 2 N TYR B 8 ? N TYR B 69 O PHE B 144 ? O PHE B 205 D 2 3 O ILE B 147 ? O ILE B 208 N TRP B 20 ? N TRP B 81 D 3 4 N LEU B 23 ? N LEU B 84 O TYR B 104 ? O TYR B 165 D 4 5 N MET B 107 ? N MET B 168 O TYR B 114 ? O TYR B 175 D 5 6 O GLY B 118 ? O GLY B 179 N PHE B 98 ? N PHE B 159 D 6 7 O LEU B 97 ? O LEU B 158 N PHE B 79 ? N PHE B 140 D 7 8 O VAL B 82 ? O VAL B 143 N ALA B 43 ? N ALA B 104 D 8 9 O THR B 44 ? O THR B 105 N VAL B 31 ? N VAL B 92 D 9 10 N GLN B 33 ? N GLN B 94 O THR B 139 ? O THR B 200 D 10 11 O MET B 138 ? O MET B 199 N PHE B 13 ? N PHE B 74 E 1 2 N TYR B 8 ? N TYR B 69 O PHE B 144 ? O PHE B 205 E 2 3 O ILE B 147 ? O ILE B 208 N TRP B 20 ? N TRP B 81 E 3 4 N LEU B 23 ? N LEU B 84 O TYR B 104 ? O TYR B 165 E 4 5 N MET B 107 ? N MET B 168 O TYR B 114 ? O TYR B 175 E 5 6 N ASN B 117 ? N ASN B 178 O THR B 124 ? O THR B 185 F 1 2 N TYR B 58 ? N TYR B 119 O VAL B 65 ? O VAL B 126 # _database_PDB_matrix.entry_id 3SIT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3SIT _atom_sites.fract_transf_matrix[1][1] 0.017613 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017435 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008839 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 62 62 GLY GLY A . n A 1 2 SER 2 63 63 SER SER A . n A 1 3 LEU 3 64 64 LEU LEU A . n A 1 4 LEU 4 65 65 LEU LEU A . n A 1 5 ASP 5 66 66 ASP ASP A . n A 1 6 GLY 6 67 67 GLY GLY A . n A 1 7 PRO 7 68 68 PRO PRO A . n A 1 8 TYR 8 69 69 TYR TYR A . n A 1 9 GLN 9 70 70 GLN GLN A . n A 1 10 PRO 10 71 71 PRO PRO A . n A 1 11 THR 11 72 72 THR THR A . n A 1 12 THR 12 73 73 THR THR A . n A 1 13 PHE 13 74 74 PHE PHE A . n A 1 14 ASN 14 75 75 ASN ASN A . n A 1 15 PRO 15 76 76 PRO PRO A . n A 1 16 PRO 16 77 77 PRO PRO A . n A 1 17 THR 17 78 78 THR THR A . n A 1 18 SER 18 79 79 SER SER A . n A 1 19 TYR 19 80 80 TYR TYR A . n A 1 20 TRP 20 81 81 TRP TRP A . n A 1 21 ILE 21 82 82 ILE ILE A . n A 1 22 LEU 22 83 83 LEU LEU A . n A 1 23 LEU 23 84 84 LEU LEU A . n A 1 24 ALA 24 85 85 ALA ALA A . n A 1 25 PRO 25 86 86 PRO PRO A . n A 1 26 THR 26 87 87 THR THR A . n A 1 27 VAL 27 88 88 VAL VAL A . n A 1 28 GLU 28 89 89 GLU GLU A . n A 1 29 GLY 29 90 90 GLY GLY A . n A 1 30 VAL 30 91 91 VAL VAL A . n A 1 31 VAL 31 92 92 VAL VAL A . n A 1 32 ILE 32 93 93 ILE ILE A . n A 1 33 GLN 33 94 94 GLN GLN A . n A 1 34 GLY 34 95 95 GLY GLY A . n A 1 35 THR 35 96 96 THR THR A . n A 1 36 ASN 36 97 97 ASN ASN A . n A 1 37 ASN 37 98 98 ASN ASN A . n A 1 38 ILE 38 99 99 ILE ILE A . n A 1 39 ASP 39 100 100 ASP ASP A . n A 1 40 ARG 40 101 101 ARG ARG A . n A 1 41 TRP 41 102 102 TRP TRP A . n A 1 42 LEU 42 103 103 LEU LEU A . n A 1 43 ALA 43 104 104 ALA ALA A . n A 1 44 THR 44 105 105 THR THR A . n A 1 45 ILE 45 106 106 ILE ILE A . n A 1 46 LEU 46 107 107 LEU LEU A . n A 1 47 ILE 47 108 108 ILE ILE A . n A 1 48 GLU 48 109 109 GLU GLU A . n A 1 49 PRO 49 110 110 PRO PRO A . n A 1 50 ASN 50 111 111 ASN ASN A . n A 1 51 VAL 51 112 112 VAL VAL A . n A 1 52 GLN 52 113 113 GLN GLN A . n A 1 53 THR 53 114 114 THR THR A . n A 1 54 THR 54 115 115 THR THR A . n A 1 55 ASN 55 116 116 ASN ASN A . n A 1 56 ARG 56 117 117 ARG ARG A . n A 1 57 ILE 57 118 118 ILE ILE A . n A 1 58 TYR 58 119 119 TYR TYR A . n A 1 59 ASN 59 120 120 ASN ASN A . n A 1 60 LEU 60 121 121 LEU LEU A . n A 1 61 PHE 61 122 122 PHE PHE A . n A 1 62 GLY 62 123 123 GLY GLY A . n A 1 63 GLN 63 124 124 GLN GLN A . n A 1 64 GLN 64 125 125 GLN GLN A . n A 1 65 VAL 65 126 126 VAL VAL A . n A 1 66 THR 66 127 127 THR THR A . n A 1 67 LEU 67 128 128 LEU LEU A . n A 1 68 SER 68 129 129 SER SER A . n A 1 69 VAL 69 130 130 VAL VAL A . n A 1 70 GLU 70 131 131 GLU GLU A . n A 1 71 ASN 71 132 132 ASN ASN A . n A 1 72 THR 72 133 133 THR THR A . n A 1 73 SER 73 134 134 SER SER A . n A 1 74 GLN 74 135 135 GLN GLN A . n A 1 75 THR 75 136 136 THR THR A . n A 1 76 GLN 76 137 137 GLN GLN A . n A 1 77 TRP 77 138 138 TRP TRP A . n A 1 78 LYS 78 139 139 LYS LYS A . n A 1 79 PHE 79 140 140 PHE PHE A . n A 1 80 ILE 80 141 141 ILE ILE A . n A 1 81 ASP 81 142 142 ASP ASP A . n A 1 82 VAL 82 143 143 VAL VAL A . n A 1 83 SER 83 144 144 SER SER A . n A 1 84 LYS 84 145 145 LYS LYS A . n A 1 85 THR 85 146 146 THR THR A . n A 1 86 THR 86 147 147 THR THR A . n A 1 87 PRO 87 148 148 PRO PRO A . n A 1 88 THR 88 149 149 THR THR A . n A 1 89 GLY 89 150 150 GLY GLY A . n A 1 90 ASN 90 151 151 ASN ASN A . n A 1 91 TYR 91 152 152 TYR TYR A . n A 1 92 THR 92 153 153 THR THR A . n A 1 93 GLN 93 154 154 GLN GLN A . n A 1 94 HIS 94 155 155 HIS HIS A . n A 1 95 GLY 95 156 156 GLY GLY A . n A 1 96 PRO 96 157 157 PRO PRO A . n A 1 97 LEU 97 158 158 LEU LEU A . n A 1 98 PHE 98 159 159 PHE PHE A . n A 1 99 SER 99 160 160 SER SER A . n A 1 100 THR 100 161 161 THR THR A . n A 1 101 PRO 101 162 162 PRO PRO A . n A 1 102 LYS 102 163 163 LYS LYS A . n A 1 103 LEU 103 164 164 LEU LEU A . n A 1 104 TYR 104 165 165 TYR TYR A . n A 1 105 ALA 105 166 166 ALA ALA A . n A 1 106 VAL 106 167 167 VAL VAL A . n A 1 107 MET 107 168 168 MET MET A . n A 1 108 LYS 108 169 169 LYS LYS A . n A 1 109 PHE 109 170 170 PHE PHE A . n A 1 110 SER 110 171 171 SER SER A . n A 1 111 GLY 111 172 172 GLY GLY A . n A 1 112 ARG 112 173 173 ARG ARG A . n A 1 113 ILE 113 174 174 ILE ILE A . n A 1 114 TYR 114 175 175 TYR TYR A . n A 1 115 THR 115 176 176 THR THR A . n A 1 116 TYR 116 177 177 TYR TYR A . n A 1 117 ASN 117 178 178 ASN ASN A . n A 1 118 GLY 118 179 179 GLY GLY A . n A 1 119 THR 119 180 180 THR THR A . n A 1 120 THR 120 181 181 THR THR A . n A 1 121 PRO 121 182 182 PRO PRO A . n A 1 122 ASN 122 183 183 ASN ASN A . n A 1 123 ALA 123 184 184 ALA ALA A . n A 1 124 THR 124 185 185 THR THR A . n A 1 125 THR 125 186 186 THR THR A . n A 1 126 GLY 126 187 187 GLY GLY A . n A 1 127 TYR 127 188 188 TYR TYR A . n A 1 128 TYR 128 189 189 TYR TYR A . n A 1 129 SER 129 190 190 SER SER A . n A 1 130 THR 130 191 191 THR THR A . n A 1 131 THR 131 192 192 THR THR A . n A 1 132 ASN 132 193 193 ASN ASN A . n A 1 133 TYR 133 194 194 TYR TYR A . n A 1 134 ASP 134 195 195 ASP ASP A . n A 1 135 THR 135 196 196 THR THR A . n A 1 136 VAL 136 197 197 VAL VAL A . n A 1 137 ASN 137 198 198 ASN ASN A . n A 1 138 MET 138 199 199 MET MET A . n A 1 139 THR 139 200 200 THR THR A . n A 1 140 SER 140 201 201 SER SER A . n A 1 141 PHE 141 202 202 PHE PHE A . n A 1 142 CYS 142 203 203 CYS CYS A . n A 1 143 ASP 143 204 204 ASP ASP A . n A 1 144 PHE 144 205 205 PHE PHE A . n A 1 145 TYR 145 206 206 TYR TYR A . n A 1 146 ILE 146 207 207 ILE ILE A . n A 1 147 ILE 147 208 208 ILE ILE A . n A 1 148 PRO 148 209 209 PRO PRO A . n A 1 149 ARG 149 210 210 ARG ARG A . n A 1 150 ASN 150 211 211 ASN ASN A . n A 1 151 GLN 151 212 212 GLN GLN A . n A 1 152 GLU 152 213 213 GLU GLU A . n A 1 153 GLU 153 214 214 GLU GLU A . n A 1 154 LYS 154 215 215 LYS LYS A . n A 1 155 CYS 155 216 216 CYS CYS A . n A 1 156 THR 156 217 217 THR THR A . n A 1 157 GLU 157 218 218 GLU GLU A . n A 1 158 TYR 158 219 219 TYR TYR A . n A 1 159 ILE 159 220 220 ILE ILE A . n A 1 160 ASN 160 221 221 ASN ASN A . n A 1 161 HIS 161 222 222 HIS HIS A . n A 1 162 GLY 162 223 223 GLY GLY A . n A 1 163 LEU 163 224 224 LEU LEU A . n B 1 1 GLY 1 62 ? ? ? B . n B 1 2 SER 2 63 ? ? ? B . n B 1 3 LEU 3 64 64 LEU LEU B . n B 1 4 LEU 4 65 65 LEU LEU B . n B 1 5 ASP 5 66 66 ASP ASP B . n B 1 6 GLY 6 67 67 GLY GLY B . n B 1 7 PRO 7 68 68 PRO PRO B . n B 1 8 TYR 8 69 69 TYR TYR B . n B 1 9 GLN 9 70 70 GLN GLN B . n B 1 10 PRO 10 71 71 PRO PRO B . n B 1 11 THR 11 72 72 THR THR B . n B 1 12 THR 12 73 73 THR THR B . n B 1 13 PHE 13 74 74 PHE PHE B . n B 1 14 ASN 14 75 75 ASN ASN B . n B 1 15 PRO 15 76 76 PRO PRO B . n B 1 16 PRO 16 77 77 PRO PRO B . n B 1 17 THR 17 78 78 THR THR B . n B 1 18 SER 18 79 79 SER SER B . n B 1 19 TYR 19 80 80 TYR TYR B . n B 1 20 TRP 20 81 81 TRP TRP B . n B 1 21 ILE 21 82 82 ILE ILE B . n B 1 22 LEU 22 83 83 LEU LEU B . n B 1 23 LEU 23 84 84 LEU LEU B . n B 1 24 ALA 24 85 85 ALA ALA B . n B 1 25 PRO 25 86 86 PRO PRO B . n B 1 26 THR 26 87 87 THR THR B . n B 1 27 VAL 27 88 88 VAL VAL B . n B 1 28 GLU 28 89 89 GLU GLU B . n B 1 29 GLY 29 90 90 GLY GLY B . n B 1 30 VAL 30 91 91 VAL VAL B . n B 1 31 VAL 31 92 92 VAL VAL B . n B 1 32 ILE 32 93 93 ILE ILE B . n B 1 33 GLN 33 94 94 GLN GLN B . n B 1 34 GLY 34 95 95 GLY GLY B . n B 1 35 THR 35 96 96 THR THR B . n B 1 36 ASN 36 97 97 ASN ASN B . n B 1 37 ASN 37 98 98 ASN ASN B . n B 1 38 ILE 38 99 99 ILE ILE B . n B 1 39 ASP 39 100 100 ASP ASP B . n B 1 40 ARG 40 101 101 ARG ARG B . n B 1 41 TRP 41 102 102 TRP TRP B . n B 1 42 LEU 42 103 103 LEU LEU B . n B 1 43 ALA 43 104 104 ALA ALA B . n B 1 44 THR 44 105 105 THR THR B . n B 1 45 ILE 45 106 106 ILE ILE B . n B 1 46 LEU 46 107 107 LEU LEU B . n B 1 47 ILE 47 108 108 ILE ILE B . n B 1 48 GLU 48 109 109 GLU GLU B . n B 1 49 PRO 49 110 110 PRO PRO B . n B 1 50 ASN 50 111 111 ASN ASN B . n B 1 51 VAL 51 112 112 VAL VAL B . n B 1 52 GLN 52 113 113 GLN GLN B . n B 1 53 THR 53 114 114 THR THR B . n B 1 54 THR 54 115 115 THR THR B . n B 1 55 ASN 55 116 116 ASN ASN B . n B 1 56 ARG 56 117 117 ARG ARG B . n B 1 57 ILE 57 118 118 ILE ILE B . n B 1 58 TYR 58 119 119 TYR TYR B . n B 1 59 ASN 59 120 120 ASN ASN B . n B 1 60 LEU 60 121 121 LEU LEU B . n B 1 61 PHE 61 122 122 PHE PHE B . n B 1 62 GLY 62 123 123 GLY GLY B . n B 1 63 GLN 63 124 124 GLN GLN B . n B 1 64 GLN 64 125 125 GLN GLN B . n B 1 65 VAL 65 126 126 VAL VAL B . n B 1 66 THR 66 127 127 THR THR B . n B 1 67 LEU 67 128 128 LEU LEU B . n B 1 68 SER 68 129 129 SER SER B . n B 1 69 VAL 69 130 130 VAL VAL B . n B 1 70 GLU 70 131 131 GLU GLU B . n B 1 71 ASN 71 132 132 ASN ASN B . n B 1 72 THR 72 133 133 THR THR B . n B 1 73 SER 73 134 134 SER SER B . n B 1 74 GLN 74 135 135 GLN GLN B . n B 1 75 THR 75 136 136 THR THR B . n B 1 76 GLN 76 137 137 GLN GLN B . n B 1 77 TRP 77 138 138 TRP TRP B . n B 1 78 LYS 78 139 139 LYS LYS B . n B 1 79 PHE 79 140 140 PHE PHE B . n B 1 80 ILE 80 141 141 ILE ILE B . n B 1 81 ASP 81 142 142 ASP ASP B . n B 1 82 VAL 82 143 143 VAL VAL B . n B 1 83 SER 83 144 144 SER SER B . n B 1 84 LYS 84 145 145 LYS LYS B . n B 1 85 THR 85 146 146 THR THR B . n B 1 86 THR 86 147 147 THR THR B . n B 1 87 PRO 87 148 148 PRO PRO B . n B 1 88 THR 88 149 149 THR THR B . n B 1 89 GLY 89 150 150 GLY GLY B . n B 1 90 ASN 90 151 151 ASN ASN B . n B 1 91 TYR 91 152 152 TYR TYR B . n B 1 92 THR 92 153 153 THR THR B . n B 1 93 GLN 93 154 154 GLN GLN B . n B 1 94 HIS 94 155 155 HIS HIS B . n B 1 95 GLY 95 156 156 GLY GLY B . n B 1 96 PRO 96 157 157 PRO PRO B . n B 1 97 LEU 97 158 158 LEU LEU B . n B 1 98 PHE 98 159 159 PHE PHE B . n B 1 99 SER 99 160 160 SER SER B . n B 1 100 THR 100 161 161 THR THR B . n B 1 101 PRO 101 162 162 PRO PRO B . n B 1 102 LYS 102 163 163 LYS LYS B . n B 1 103 LEU 103 164 164 LEU LEU B . n B 1 104 TYR 104 165 165 TYR TYR B . n B 1 105 ALA 105 166 166 ALA ALA B . n B 1 106 VAL 106 167 167 VAL VAL B . n B 1 107 MET 107 168 168 MET MET B . n B 1 108 LYS 108 169 169 LYS LYS B . n B 1 109 PHE 109 170 170 PHE PHE B . n B 1 110 SER 110 171 171 SER SER B . n B 1 111 GLY 111 172 172 GLY GLY B . n B 1 112 ARG 112 173 173 ARG ARG B . n B 1 113 ILE 113 174 174 ILE ILE B . n B 1 114 TYR 114 175 175 TYR TYR B . n B 1 115 THR 115 176 176 THR THR B . n B 1 116 TYR 116 177 177 TYR TYR B . n B 1 117 ASN 117 178 178 ASN ASN B . n B 1 118 GLY 118 179 179 GLY GLY B . n B 1 119 THR 119 180 180 THR THR B . n B 1 120 THR 120 181 181 THR THR B . n B 1 121 PRO 121 182 182 PRO PRO B . n B 1 122 ASN 122 183 183 ASN ASN B . n B 1 123 ALA 123 184 184 ALA ALA B . n B 1 124 THR 124 185 185 THR THR B . n B 1 125 THR 125 186 186 THR THR B . n B 1 126 GLY 126 187 187 GLY GLY B . n B 1 127 TYR 127 188 188 TYR TYR B . n B 1 128 TYR 128 189 189 TYR TYR B . n B 1 129 SER 129 190 190 SER SER B . n B 1 130 THR 130 191 191 THR THR B . n B 1 131 THR 131 192 192 THR THR B . n B 1 132 ASN 132 193 193 ASN ASN B . n B 1 133 TYR 133 194 194 TYR TYR B . n B 1 134 ASP 134 195 195 ASP ASP B . n B 1 135 THR 135 196 196 THR THR B . n B 1 136 VAL 136 197 197 VAL VAL B . n B 1 137 ASN 137 198 198 ASN ASN B . n B 1 138 MET 138 199 199 MET MET B . n B 1 139 THR 139 200 200 THR THR B . n B 1 140 SER 140 201 201 SER SER B . n B 1 141 PHE 141 202 202 PHE PHE B . n B 1 142 CYS 142 203 203 CYS CYS B . n B 1 143 ASP 143 204 204 ASP ASP B . n B 1 144 PHE 144 205 205 PHE PHE B . n B 1 145 TYR 145 206 206 TYR TYR B . n B 1 146 ILE 146 207 207 ILE ILE B . n B 1 147 ILE 147 208 208 ILE ILE B . n B 1 148 PRO 148 209 209 PRO PRO B . n B 1 149 ARG 149 210 210 ARG ARG B . n B 1 150 ASN 150 211 211 ASN ASN B . n B 1 151 GLN 151 212 212 GLN GLN B . n B 1 152 GLU 152 213 213 GLU GLU B . n B 1 153 GLU 153 214 214 GLU GLU B . n B 1 154 LYS 154 215 215 LYS LYS B . n B 1 155 CYS 155 216 216 CYS CYS B . n B 1 156 THR 156 217 217 THR THR B . n B 1 157 GLU 157 218 218 GLU GLU B . n B 1 158 TYR 158 219 219 TYR TYR B . n B 1 159 ILE 159 220 220 ILE ILE B . n B 1 160 ASN 160 221 221 ASN ASN B . n B 1 161 HIS 161 222 222 HIS HIS B . n B 1 162 GLY 162 223 223 GLY GLY B . n B 1 163 LEU 163 224 224 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NA 1 3000 3000 NA NA A . F 4 MRD 1 4210 4210 MRD MRD A . G 3 NA 1 3001 3001 NA NA B . H 4 MRD 1 4210 4210 MRD MRD B . I 5 HOH 1 1 1 HOH HOH A . I 5 HOH 2 2 2 HOH HOH A . I 5 HOH 3 3 3 HOH HOH A . I 5 HOH 4 4 4 HOH HOH A . I 5 HOH 5 5 5 HOH HOH A . I 5 HOH 6 7 7 HOH HOH A . I 5 HOH 7 11 11 HOH HOH A . I 5 HOH 8 12 12 HOH HOH A . I 5 HOH 9 13 13 HOH HOH A . I 5 HOH 10 15 15 HOH HOH A . I 5 HOH 11 17 17 HOH HOH A . I 5 HOH 12 18 18 HOH HOH A . I 5 HOH 13 19 19 HOH HOH A . I 5 HOH 14 20 20 HOH HOH A . I 5 HOH 15 21 21 HOH HOH A . I 5 HOH 16 23 23 HOH HOH A . I 5 HOH 17 31 31 HOH HOH A . I 5 HOH 18 33 33 HOH HOH A . I 5 HOH 19 34 34 HOH HOH A . I 5 HOH 20 35 35 HOH HOH A . I 5 HOH 21 38 38 HOH HOH A . I 5 HOH 22 40 40 HOH HOH A . I 5 HOH 23 43 43 HOH HOH A . I 5 HOH 24 47 47 HOH HOH A . I 5 HOH 25 50 50 HOH HOH A . I 5 HOH 26 54 54 HOH HOH A . I 5 HOH 27 60 60 HOH HOH A . I 5 HOH 28 61 61 HOH HOH A . I 5 HOH 29 225 225 HOH HOH A . I 5 HOH 30 226 226 HOH HOH A . I 5 HOH 31 227 227 HOH HOH A . I 5 HOH 32 228 228 HOH HOH A . I 5 HOH 33 229 229 HOH HOH A . I 5 HOH 34 230 230 HOH HOH A . I 5 HOH 35 231 231 HOH HOH A . I 5 HOH 36 232 232 HOH HOH A . I 5 HOH 37 233 233 HOH HOH A . I 5 HOH 38 234 234 HOH HOH A . I 5 HOH 39 235 235 HOH HOH A . I 5 HOH 40 236 236 HOH HOH A . I 5 HOH 41 237 237 HOH HOH A . I 5 HOH 42 238 238 HOH HOH A . I 5 HOH 43 239 239 HOH HOH A . I 5 HOH 44 240 240 HOH HOH A . I 5 HOH 45 241 241 HOH HOH A . I 5 HOH 46 242 242 HOH HOH A . I 5 HOH 47 243 243 HOH HOH A . I 5 HOH 48 244 244 HOH HOH A . I 5 HOH 49 245 245 HOH HOH A . I 5 HOH 50 246 246 HOH HOH A . I 5 HOH 51 247 247 HOH HOH A . I 5 HOH 52 248 248 HOH HOH A . I 5 HOH 53 249 249 HOH HOH A . I 5 HOH 54 250 250 HOH HOH A . I 5 HOH 55 251 251 HOH HOH A . I 5 HOH 56 252 252 HOH HOH A . I 5 HOH 57 253 253 HOH HOH A . I 5 HOH 58 254 254 HOH HOH A . I 5 HOH 59 255 255 HOH HOH A . I 5 HOH 60 256 256 HOH HOH A . I 5 HOH 61 257 257 HOH HOH A . I 5 HOH 62 258 258 HOH HOH A . I 5 HOH 63 259 259 HOH HOH A . I 5 HOH 64 260 260 HOH HOH A . I 5 HOH 65 261 261 HOH HOH A . I 5 HOH 66 262 262 HOH HOH A . I 5 HOH 67 263 263 HOH HOH A . I 5 HOH 68 264 264 HOH HOH A . I 5 HOH 69 265 265 HOH HOH A . I 5 HOH 70 266 266 HOH HOH A . I 5 HOH 71 267 267 HOH HOH A . I 5 HOH 72 268 268 HOH HOH A . I 5 HOH 73 269 269 HOH HOH A . I 5 HOH 74 270 270 HOH HOH A . I 5 HOH 75 271 271 HOH HOH A . I 5 HOH 76 272 272 HOH HOH A . I 5 HOH 77 273 273 HOH HOH A . I 5 HOH 78 274 274 HOH HOH A . I 5 HOH 79 275 275 HOH HOH A . I 5 HOH 80 276 276 HOH HOH A . I 5 HOH 81 277 277 HOH HOH A . I 5 HOH 82 278 278 HOH HOH A . I 5 HOH 83 279 279 HOH HOH A . I 5 HOH 84 280 280 HOH HOH A . I 5 HOH 85 281 281 HOH HOH A . I 5 HOH 86 282 282 HOH HOH A . I 5 HOH 87 283 283 HOH HOH A . I 5 HOH 88 284 284 HOH HOH A . I 5 HOH 89 285 285 HOH HOH A . I 5 HOH 90 286 286 HOH HOH A . I 5 HOH 91 287 287 HOH HOH A . I 5 HOH 92 288 288 HOH HOH A . I 5 HOH 93 289 289 HOH HOH A . I 5 HOH 94 290 290 HOH HOH A . I 5 HOH 95 291 291 HOH HOH A . I 5 HOH 96 292 292 HOH HOH A . I 5 HOH 97 293 293 HOH HOH A . I 5 HOH 98 294 294 HOH HOH A . I 5 HOH 99 295 295 HOH HOH A . I 5 HOH 100 296 296 HOH HOH A . I 5 HOH 101 297 297 HOH HOH A . I 5 HOH 102 298 298 HOH HOH A . I 5 HOH 103 299 299 HOH HOH A . I 5 HOH 104 300 300 HOH HOH A . I 5 HOH 105 301 301 HOH HOH A . I 5 HOH 106 302 302 HOH HOH A . I 5 HOH 107 303 303 HOH HOH A . I 5 HOH 108 304 304 HOH HOH A . I 5 HOH 109 305 305 HOH HOH A . I 5 HOH 110 306 306 HOH HOH A . I 5 HOH 111 307 307 HOH HOH A . I 5 HOH 112 308 308 HOH HOH A . I 5 HOH 113 309 309 HOH HOH A . I 5 HOH 114 310 310 HOH HOH A . I 5 HOH 115 311 311 HOH HOH A . I 5 HOH 116 312 312 HOH HOH A . I 5 HOH 117 313 313 HOH HOH A . I 5 HOH 118 314 314 HOH HOH A . I 5 HOH 119 315 315 HOH HOH A . I 5 HOH 120 316 316 HOH HOH A . I 5 HOH 121 317 317 HOH HOH A . I 5 HOH 122 318 318 HOH HOH A . I 5 HOH 123 319 319 HOH HOH A . I 5 HOH 124 320 320 HOH HOH A . I 5 HOH 125 321 321 HOH HOH A . I 5 HOH 126 322 322 HOH HOH A . I 5 HOH 127 323 323 HOH HOH A . I 5 HOH 128 324 324 HOH HOH A . I 5 HOH 129 325 325 HOH HOH A . I 5 HOH 130 326 326 HOH HOH A . I 5 HOH 131 327 327 HOH HOH A . I 5 HOH 132 328 328 HOH HOH A . I 5 HOH 133 329 329 HOH HOH A . I 5 HOH 134 330 330 HOH HOH A . I 5 HOH 135 331 331 HOH HOH A . I 5 HOH 136 332 332 HOH HOH A . I 5 HOH 137 333 333 HOH HOH A . I 5 HOH 138 334 334 HOH HOH A . I 5 HOH 139 335 335 HOH HOH A . I 5 HOH 140 336 336 HOH HOH A . I 5 HOH 141 337 337 HOH HOH A . I 5 HOH 142 338 338 HOH HOH A . I 5 HOH 143 339 339 HOH HOH A . I 5 HOH 144 340 340 HOH HOH A . I 5 HOH 145 341 341 HOH HOH A . I 5 HOH 146 342 342 HOH HOH A . I 5 HOH 147 343 343 HOH HOH A . I 5 HOH 148 344 344 HOH HOH A . I 5 HOH 149 345 345 HOH HOH A . I 5 HOH 150 346 346 HOH HOH A . I 5 HOH 151 347 347 HOH HOH A . I 5 HOH 152 348 348 HOH HOH A . I 5 HOH 153 349 349 HOH HOH A . I 5 HOH 154 350 350 HOH HOH A . I 5 HOH 155 351 351 HOH HOH A . I 5 HOH 156 352 352 HOH HOH A . I 5 HOH 157 353 353 HOH HOH A . I 5 HOH 158 354 354 HOH HOH A . I 5 HOH 159 355 355 HOH HOH A . I 5 HOH 160 356 356 HOH HOH A . I 5 HOH 161 357 357 HOH HOH A . I 5 HOH 162 358 358 HOH HOH A . I 5 HOH 163 359 359 HOH HOH A . J 5 HOH 1 6 6 HOH HOH B . J 5 HOH 2 8 8 HOH HOH B . J 5 HOH 3 9 9 HOH HOH B . J 5 HOH 4 10 10 HOH HOH B . J 5 HOH 5 14 14 HOH HOH B . J 5 HOH 6 16 16 HOH HOH B . J 5 HOH 7 22 22 HOH HOH B . J 5 HOH 8 24 24 HOH HOH B . J 5 HOH 9 25 25 HOH HOH B . J 5 HOH 10 26 26 HOH HOH B . J 5 HOH 11 27 27 HOH HOH B . J 5 HOH 12 28 28 HOH HOH B . J 5 HOH 13 29 29 HOH HOH B . J 5 HOH 14 30 30 HOH HOH B . J 5 HOH 15 32 32 HOH HOH B . J 5 HOH 16 36 36 HOH HOH B . J 5 HOH 17 37 37 HOH HOH B . J 5 HOH 18 39 39 HOH HOH B . J 5 HOH 19 41 41 HOH HOH B . J 5 HOH 20 42 42 HOH HOH B . J 5 HOH 21 44 44 HOH HOH B . J 5 HOH 22 45 45 HOH HOH B . J 5 HOH 23 46 46 HOH HOH B . J 5 HOH 24 48 48 HOH HOH B . J 5 HOH 25 49 49 HOH HOH B . J 5 HOH 26 51 51 HOH HOH B . J 5 HOH 27 52 52 HOH HOH B . J 5 HOH 28 53 53 HOH HOH B . J 5 HOH 29 55 55 HOH HOH B . J 5 HOH 30 56 56 HOH HOH B . J 5 HOH 31 57 57 HOH HOH B . J 5 HOH 32 58 58 HOH HOH B . J 5 HOH 33 59 59 HOH HOH B . J 5 HOH 34 225 225 HOH HOH B . J 5 HOH 35 226 226 HOH HOH B . J 5 HOH 36 227 227 HOH HOH B . J 5 HOH 37 228 228 HOH HOH B . J 5 HOH 38 229 229 HOH HOH B . J 5 HOH 39 230 230 HOH HOH B . J 5 HOH 40 231 231 HOH HOH B . J 5 HOH 41 232 232 HOH HOH B . J 5 HOH 42 233 233 HOH HOH B . J 5 HOH 43 234 234 HOH HOH B . J 5 HOH 44 235 235 HOH HOH B . J 5 HOH 45 236 236 HOH HOH B . J 5 HOH 46 237 237 HOH HOH B . J 5 HOH 47 238 238 HOH HOH B . J 5 HOH 48 239 239 HOH HOH B . J 5 HOH 49 240 240 HOH HOH B . J 5 HOH 50 241 241 HOH HOH B . J 5 HOH 51 242 242 HOH HOH B . J 5 HOH 52 243 243 HOH HOH B . J 5 HOH 53 244 244 HOH HOH B . J 5 HOH 54 245 245 HOH HOH B . J 5 HOH 55 246 246 HOH HOH B . J 5 HOH 56 247 247 HOH HOH B . J 5 HOH 57 248 248 HOH HOH B . J 5 HOH 58 249 249 HOH HOH B . J 5 HOH 59 250 250 HOH HOH B . J 5 HOH 60 251 251 HOH HOH B . J 5 HOH 61 252 252 HOH HOH B . J 5 HOH 62 253 253 HOH HOH B . J 5 HOH 63 254 254 HOH HOH B . J 5 HOH 64 255 255 HOH HOH B . J 5 HOH 65 256 256 HOH HOH B . J 5 HOH 66 257 257 HOH HOH B . J 5 HOH 67 258 258 HOH HOH B . J 5 HOH 68 259 259 HOH HOH B . J 5 HOH 69 260 260 HOH HOH B . J 5 HOH 70 261 261 HOH HOH B . J 5 HOH 71 262 262 HOH HOH B . J 5 HOH 72 263 263 HOH HOH B . J 5 HOH 73 264 264 HOH HOH B . J 5 HOH 74 265 265 HOH HOH B . J 5 HOH 75 266 266 HOH HOH B . J 5 HOH 76 267 267 HOH HOH B . J 5 HOH 77 268 268 HOH HOH B . J 5 HOH 78 269 269 HOH HOH B . J 5 HOH 79 270 270 HOH HOH B . J 5 HOH 80 271 271 HOH HOH B . J 5 HOH 81 272 272 HOH HOH B . J 5 HOH 82 273 273 HOH HOH B . J 5 HOH 83 274 274 HOH HOH B . J 5 HOH 84 275 275 HOH HOH B . J 5 HOH 85 276 276 HOH HOH B . J 5 HOH 86 277 277 HOH HOH B . J 5 HOH 87 278 278 HOH HOH B . J 5 HOH 88 279 279 HOH HOH B . J 5 HOH 89 280 280 HOH HOH B . J 5 HOH 90 281 281 HOH HOH B . J 5 HOH 91 282 282 HOH HOH B . J 5 HOH 92 283 283 HOH HOH B . J 5 HOH 93 284 284 HOH HOH B . J 5 HOH 94 285 285 HOH HOH B . J 5 HOH 95 286 286 HOH HOH B . J 5 HOH 96 287 287 HOH HOH B . J 5 HOH 97 288 288 HOH HOH B . J 5 HOH 98 289 289 HOH HOH B . J 5 HOH 99 290 290 HOH HOH B . J 5 HOH 100 291 291 HOH HOH B . J 5 HOH 101 292 292 HOH HOH B . J 5 HOH 102 293 293 HOH HOH B . J 5 HOH 103 294 294 HOH HOH B . J 5 HOH 104 295 295 HOH HOH B . J 5 HOH 105 296 296 HOH HOH B . J 5 HOH 106 297 297 HOH HOH B . J 5 HOH 107 298 298 HOH HOH B . J 5 HOH 108 299 299 HOH HOH B . J 5 HOH 109 300 300 HOH HOH B . J 5 HOH 110 301 301 HOH HOH B . J 5 HOH 111 302 302 HOH HOH B . J 5 HOH 112 303 303 HOH HOH B . J 5 HOH 113 304 304 HOH HOH B . J 5 HOH 114 305 305 HOH HOH B . J 5 HOH 115 306 306 HOH HOH B . J 5 HOH 116 307 307 HOH HOH B . J 5 HOH 117 308 308 HOH HOH B . J 5 HOH 118 309 309 HOH HOH B . J 5 HOH 119 310 310 HOH HOH B . J 5 HOH 120 311 311 HOH HOH B . J 5 HOH 121 312 312 HOH HOH B . J 5 HOH 122 313 313 HOH HOH B . J 5 HOH 123 314 314 HOH HOH B . J 5 HOH 124 315 315 HOH HOH B . J 5 HOH 125 316 316 HOH HOH B . J 5 HOH 126 317 317 HOH HOH B . J 5 HOH 127 318 318 HOH HOH B . J 5 HOH 128 319 319 HOH HOH B . J 5 HOH 129 320 320 HOH HOH B . J 5 HOH 130 321 321 HOH HOH B . J 5 HOH 131 322 322 HOH HOH B . J 5 HOH 132 323 323 HOH HOH B . J 5 HOH 133 324 324 HOH HOH B . J 5 HOH 134 325 325 HOH HOH B . J 5 HOH 135 326 326 HOH HOH B . J 5 HOH 136 327 327 HOH HOH B . J 5 HOH 137 328 328 HOH HOH B . J 5 HOH 138 329 329 HOH HOH B . J 5 HOH 139 330 330 HOH HOH B . J 5 HOH 140 331 331 HOH HOH B . J 5 HOH 141 332 332 HOH HOH B . J 5 HOH 142 333 333 HOH HOH B . J 5 HOH 143 334 334 HOH HOH B . J 5 HOH 144 335 335 HOH HOH B . J 5 HOH 145 336 336 HOH HOH B . J 5 HOH 146 337 337 HOH HOH B . J 5 HOH 147 338 338 HOH HOH B . J 5 HOH 148 339 339 HOH HOH B . J 5 HOH 149 340 340 HOH HOH B . J 5 HOH 150 341 341 HOH HOH B . J 5 HOH 151 342 342 HOH HOH B . J 5 HOH 152 343 343 HOH HOH B . J 5 HOH 153 344 344 HOH HOH B . J 5 HOH 154 345 345 HOH HOH B . J 5 HOH 155 346 346 HOH HOH B . J 5 HOH 156 347 347 HOH HOH B . J 5 HOH 157 348 348 HOH HOH B . J 5 HOH 158 349 349 HOH HOH B . J 5 HOH 159 350 350 HOH HOH B . J 5 HOH 160 351 351 HOH HOH B . J 5 HOH 161 352 352 HOH HOH B . J 5 HOH 162 353 353 HOH HOH B . J 5 HOH 163 354 354 HOH HOH B . J 5 HOH 164 355 355 HOH HOH B . # _pdbx_molecule_features.prd_id PRD_900025 _pdbx_molecule_features.name "3'-sialyl-alpha-lactose" _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details oligosaccharide # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_900025 C 2 PRD_900025 D # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,F,I 2 1 B,D,G,H,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 81 ? A ASP 142 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 O ? A GLY 95 ? A GLY 156 ? 1_555 100.7 ? 2 OD2 ? A ASP 81 ? A ASP 142 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 OH ? A TYR 104 ? A TYR 165 ? 1_555 75.2 ? 3 O ? A GLY 95 ? A GLY 156 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 OH ? A TYR 104 ? A TYR 165 ? 1_555 123.0 ? 4 OD2 ? A ASP 81 ? A ASP 142 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 OG1 ? A THR 115 ? A THR 176 ? 1_555 60.9 ? 5 O ? A GLY 95 ? A GLY 156 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 OG1 ? A THR 115 ? A THR 176 ? 1_555 152.5 ? 6 OH ? A TYR 104 ? A TYR 165 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 OG1 ? A THR 115 ? A THR 176 ? 1_555 74.6 ? 7 OD2 ? A ASP 81 ? A ASP 142 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 O ? A TYR 116 ? A TYR 177 ? 1_555 154.9 ? 8 O ? A GLY 95 ? A GLY 156 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 O ? A TYR 116 ? A TYR 177 ? 1_555 104.3 ? 9 OH ? A TYR 104 ? A TYR 165 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 O ? A TYR 116 ? A TYR 177 ? 1_555 88.7 ? 10 OG1 ? A THR 115 ? A THR 176 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 O ? A TYR 116 ? A TYR 177 ? 1_555 96.6 ? 11 OD2 ? A ASP 81 ? A ASP 142 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 O ? I HOH . ? A HOH 235 ? 1_555 84.6 ? 12 O ? A GLY 95 ? A GLY 156 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 O ? I HOH . ? A HOH 235 ? 1_555 100.0 ? 13 OH ? A TYR 104 ? A TYR 165 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 O ? I HOH . ? A HOH 235 ? 1_555 134.8 ? 14 OG1 ? A THR 115 ? A THR 176 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 O ? I HOH . ? A HOH 235 ? 1_555 60.3 ? 15 O ? A TYR 116 ? A TYR 177 ? 1_555 NA ? E NA . ? A NA 3000 ? 1_555 O ? I HOH . ? A HOH 235 ? 1_555 93.8 ? 16 OD2 ? B ASP 81 ? B ASP 142 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 O ? B GLY 95 ? B GLY 156 ? 1_555 102.9 ? 17 OD2 ? B ASP 81 ? B ASP 142 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 OH ? B TYR 104 ? B TYR 165 ? 1_555 76.7 ? 18 O ? B GLY 95 ? B GLY 156 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 OH ? B TYR 104 ? B TYR 165 ? 1_555 126.9 ? 19 OD2 ? B ASP 81 ? B ASP 142 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 OG1 ? B THR 115 ? B THR 176 ? 1_555 60.1 ? 20 O ? B GLY 95 ? B GLY 156 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 OG1 ? B THR 115 ? B THR 176 ? 1_555 150.6 ? 21 OH ? B TYR 104 ? B TYR 165 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 OG1 ? B THR 115 ? B THR 176 ? 1_555 75.3 ? 22 OD2 ? B ASP 81 ? B ASP 142 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 O ? B TYR 116 ? B TYR 177 ? 1_555 152.7 ? 23 O ? B GLY 95 ? B GLY 156 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 O ? B TYR 116 ? B TYR 177 ? 1_555 104.4 ? 24 OH ? B TYR 104 ? B TYR 165 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 O ? B TYR 116 ? B TYR 177 ? 1_555 87.7 ? 25 OG1 ? B THR 115 ? B THR 176 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 O ? B TYR 116 ? B TYR 177 ? 1_555 94.6 ? 26 OD2 ? B ASP 81 ? B ASP 142 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 O ? J HOH . ? B HOH 241 ? 1_555 82.0 ? 27 O ? B GLY 95 ? B GLY 156 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 O ? J HOH . ? B HOH 241 ? 1_555 99.5 ? 28 OH ? B TYR 104 ? B TYR 165 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 O ? J HOH . ? B HOH 241 ? 1_555 132.0 ? 29 OG1 ? B THR 115 ? B THR 176 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 O ? J HOH . ? B HOH 241 ? 1_555 56.8 ? 30 O ? B TYR 116 ? B TYR 177 ? 1_555 NA ? G NA . ? B NA 3001 ? 1_555 O ? J HOH . ? B HOH 241 ? 1_555 92.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-09-28 2 'Structure model' 1 1 2011-10-12 3 'Structure model' 1 2 2011-11-30 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-09-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Refinement description' 11 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' entity_name_com 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_molecule_features 13 4 'Structure model' pdbx_nonpoly_scheme 14 4 'Structure model' pdbx_struct_assembly_gen 15 4 'Structure model' pdbx_struct_conn_angle 16 4 'Structure model' struct_asym 17 4 'Structure model' struct_conn 18 4 'Structure model' struct_ref_seq_dif 19 4 'Structure model' struct_site 20 4 'Structure model' struct_site_gen 21 5 'Structure model' chem_comp 22 5 'Structure model' chem_comp_atom 23 5 'Structure model' chem_comp_bond 24 5 'Structure model' database_2 25 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_asym_id' 10 4 'Structure model' '_atom_site.label_atom_id' 11 4 'Structure model' '_atom_site.label_comp_id' 12 4 'Structure model' '_atom_site.label_entity_id' 13 4 'Structure model' '_atom_site.type_symbol' 14 4 'Structure model' '_chem_comp.name' 15 4 'Structure model' '_chem_comp.type' 16 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 31 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 32 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 33 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 34 4 'Structure model' '_pdbx_struct_conn_angle.value' 35 4 'Structure model' '_struct_conn.pdbx_dist_value' 36 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 37 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 38 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 39 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 40 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 41 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 42 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 43 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 44 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 45 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 46 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 47 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 48 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 49 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 50 4 'Structure model' '_struct_ref_seq_dif.details' 51 5 'Structure model' '_chem_comp.pdbx_synonyms' 52 5 'Structure model' '_database_2.pdbx_DOI' 53 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 AMoRE phasing . ? 2 REFMAC refinement 5.5.0072 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 87 ? ? -115.55 -82.02 2 1 ILE A 99 ? ? -126.05 -66.93 3 1 ASP A 100 ? ? -152.70 19.12 4 1 PRO A 182 ? ? -92.15 31.85 5 1 THR B 87 ? ? -106.32 -72.20 6 1 ILE B 99 ? ? -128.79 -66.83 7 1 ASP B 100 ? ? -146.28 16.13 8 1 ASN B 111 ? ? 60.90 66.01 9 1 PRO B 182 ? ? -90.07 30.00 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLY 62 ? B GLY 1 2 1 Y 1 B SER 63 ? B SER 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GAL C1 C N R 88 GAL C2 C N R 89 GAL C3 C N S 90 GAL C4 C N R 91 GAL C5 C N R 92 GAL C6 C N N 93 GAL O1 O N N 94 GAL O2 O N N 95 GAL O3 O N N 96 GAL O4 O N N 97 GAL O5 O N N 98 GAL O6 O N N 99 GAL H1 H N N 100 GAL H2 H N N 101 GAL H3 H N N 102 GAL H4 H N N 103 GAL H5 H N N 104 GAL H61 H N N 105 GAL H62 H N N 106 GAL HO1 H N N 107 GAL HO2 H N N 108 GAL HO3 H N N 109 GAL HO4 H N N 110 GAL HO6 H N N 111 GLC C1 C N S 112 GLC C2 C N R 113 GLC C3 C N S 114 GLC C4 C N S 115 GLC C5 C N R 116 GLC C6 C N N 117 GLC O1 O N N 118 GLC O2 O N N 119 GLC O3 O N N 120 GLC O4 O N N 121 GLC O5 O N N 122 GLC O6 O N N 123 GLC H1 H N N 124 GLC H2 H N N 125 GLC H3 H N N 126 GLC H4 H N N 127 GLC H5 H N N 128 GLC H61 H N N 129 GLC H62 H N N 130 GLC HO1 H N N 131 GLC HO2 H N N 132 GLC HO3 H N N 133 GLC HO4 H N N 134 GLC HO6 H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 MRD C1 C N N 298 MRD C2 C N N 299 MRD O2 O N N 300 MRD CM C N N 301 MRD C3 C N N 302 MRD C4 C N R 303 MRD O4 O N N 304 MRD C5 C N N 305 MRD H1C1 H N N 306 MRD H1C2 H N N 307 MRD H1C3 H N N 308 MRD H2 H N N 309 MRD HMC1 H N N 310 MRD HMC2 H N N 311 MRD HMC3 H N N 312 MRD H3C1 H N N 313 MRD H3C2 H N N 314 MRD H4 H N N 315 MRD HA H N N 316 MRD H5C1 H N N 317 MRD H5C2 H N N 318 MRD H5C3 H N N 319 NA NA NA N N 320 PHE N N N N 321 PHE CA C N S 322 PHE C C N N 323 PHE O O N N 324 PHE CB C N N 325 PHE CG C Y N 326 PHE CD1 C Y N 327 PHE CD2 C Y N 328 PHE CE1 C Y N 329 PHE CE2 C Y N 330 PHE CZ C Y N 331 PHE OXT O N N 332 PHE H H N N 333 PHE H2 H N N 334 PHE HA H N N 335 PHE HB2 H N N 336 PHE HB3 H N N 337 PHE HD1 H N N 338 PHE HD2 H N N 339 PHE HE1 H N N 340 PHE HE2 H N N 341 PHE HZ H N N 342 PHE HXT H N N 343 PRO N N N N 344 PRO CA C N S 345 PRO C C N N 346 PRO O O N N 347 PRO CB C N N 348 PRO CG C N N 349 PRO CD C N N 350 PRO OXT O N N 351 PRO H H N N 352 PRO HA H N N 353 PRO HB2 H N N 354 PRO HB3 H N N 355 PRO HG2 H N N 356 PRO HG3 H N N 357 PRO HD2 H N N 358 PRO HD3 H N N 359 PRO HXT H N N 360 SER N N N N 361 SER CA C N S 362 SER C C N N 363 SER O O N N 364 SER CB C N N 365 SER OG O N N 366 SER OXT O N N 367 SER H H N N 368 SER H2 H N N 369 SER HA H N N 370 SER HB2 H N N 371 SER HB3 H N N 372 SER HG H N N 373 SER HXT H N N 374 SIA C1 C N N 375 SIA C2 C N R 376 SIA C3 C N N 377 SIA C4 C N S 378 SIA C5 C N R 379 SIA C6 C N R 380 SIA C7 C N R 381 SIA C8 C N R 382 SIA C9 C N N 383 SIA C10 C N N 384 SIA C11 C N N 385 SIA N5 N N N 386 SIA O1A O N N 387 SIA O1B O N N 388 SIA O2 O N N 389 SIA O4 O N N 390 SIA O6 O N N 391 SIA O7 O N N 392 SIA O8 O N N 393 SIA O9 O N N 394 SIA O10 O N N 395 SIA H32 H N N 396 SIA H31 H N N 397 SIA H4 H N N 398 SIA H5 H N N 399 SIA H6 H N N 400 SIA H7 H N N 401 SIA H8 H N N 402 SIA H92 H N N 403 SIA H91 H N N 404 SIA H111 H N N 405 SIA H113 H N N 406 SIA H112 H N N 407 SIA HN5 H N N 408 SIA HO1B H N N 409 SIA HO2 H N N 410 SIA HO4 H N N 411 SIA HO7 H N N 412 SIA HO8 H N N 413 SIA HO9 H N N 414 THR N N N N 415 THR CA C N S 416 THR C C N N 417 THR O O N N 418 THR CB C N R 419 THR OG1 O N N 420 THR CG2 C N N 421 THR OXT O N N 422 THR H H N N 423 THR H2 H N N 424 THR HA H N N 425 THR HB H N N 426 THR HG1 H N N 427 THR HG21 H N N 428 THR HG22 H N N 429 THR HG23 H N N 430 THR HXT H N N 431 TRP N N N N 432 TRP CA C N S 433 TRP C C N N 434 TRP O O N N 435 TRP CB C N N 436 TRP CG C Y N 437 TRP CD1 C Y N 438 TRP CD2 C Y N 439 TRP NE1 N Y N 440 TRP CE2 C Y N 441 TRP CE3 C Y N 442 TRP CZ2 C Y N 443 TRP CZ3 C Y N 444 TRP CH2 C Y N 445 TRP OXT O N N 446 TRP H H N N 447 TRP H2 H N N 448 TRP HA H N N 449 TRP HB2 H N N 450 TRP HB3 H N N 451 TRP HD1 H N N 452 TRP HE1 H N N 453 TRP HE3 H N N 454 TRP HZ2 H N N 455 TRP HZ3 H N N 456 TRP HH2 H N N 457 TRP HXT H N N 458 TYR N N N N 459 TYR CA C N S 460 TYR C C N N 461 TYR O O N N 462 TYR CB C N N 463 TYR CG C Y N 464 TYR CD1 C Y N 465 TYR CD2 C Y N 466 TYR CE1 C Y N 467 TYR CE2 C Y N 468 TYR CZ C Y N 469 TYR OH O N N 470 TYR OXT O N N 471 TYR H H N N 472 TYR H2 H N N 473 TYR HA H N N 474 TYR HB2 H N N 475 TYR HB3 H N N 476 TYR HD1 H N N 477 TYR HD2 H N N 478 TYR HE1 H N N 479 TYR HE2 H N N 480 TYR HH H N N 481 TYR HXT H N N 482 VAL N N N N 483 VAL CA C N S 484 VAL C C N N 485 VAL O O N N 486 VAL CB C N N 487 VAL CG1 C N N 488 VAL CG2 C N N 489 VAL OXT O N N 490 VAL H H N N 491 VAL H2 H N N 492 VAL HA H N N 493 VAL HB H N N 494 VAL HG11 H N N 495 VAL HG12 H N N 496 VAL HG13 H N N 497 VAL HG21 H N N 498 VAL HG22 H N N 499 VAL HG23 H N N 500 VAL HXT H N N 501 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GAL C1 C2 sing N N 83 GAL C1 O1 sing N N 84 GAL C1 O5 sing N N 85 GAL C1 H1 sing N N 86 GAL C2 C3 sing N N 87 GAL C2 O2 sing N N 88 GAL C2 H2 sing N N 89 GAL C3 C4 sing N N 90 GAL C3 O3 sing N N 91 GAL C3 H3 sing N N 92 GAL C4 C5 sing N N 93 GAL C4 O4 sing N N 94 GAL C4 H4 sing N N 95 GAL C5 C6 sing N N 96 GAL C5 O5 sing N N 97 GAL C5 H5 sing N N 98 GAL C6 O6 sing N N 99 GAL C6 H61 sing N N 100 GAL C6 H62 sing N N 101 GAL O1 HO1 sing N N 102 GAL O2 HO2 sing N N 103 GAL O3 HO3 sing N N 104 GAL O4 HO4 sing N N 105 GAL O6 HO6 sing N N 106 GLC C1 C2 sing N N 107 GLC C1 O1 sing N N 108 GLC C1 O5 sing N N 109 GLC C1 H1 sing N N 110 GLC C2 C3 sing N N 111 GLC C2 O2 sing N N 112 GLC C2 H2 sing N N 113 GLC C3 C4 sing N N 114 GLC C3 O3 sing N N 115 GLC C3 H3 sing N N 116 GLC C4 C5 sing N N 117 GLC C4 O4 sing N N 118 GLC C4 H4 sing N N 119 GLC C5 C6 sing N N 120 GLC C5 O5 sing N N 121 GLC C5 H5 sing N N 122 GLC C6 O6 sing N N 123 GLC C6 H61 sing N N 124 GLC C6 H62 sing N N 125 GLC O1 HO1 sing N N 126 GLC O2 HO2 sing N N 127 GLC O3 HO3 sing N N 128 GLC O4 HO4 sing N N 129 GLC O6 HO6 sing N N 130 GLN N CA sing N N 131 GLN N H sing N N 132 GLN N H2 sing N N 133 GLN CA C sing N N 134 GLN CA CB sing N N 135 GLN CA HA sing N N 136 GLN C O doub N N 137 GLN C OXT sing N N 138 GLN CB CG sing N N 139 GLN CB HB2 sing N N 140 GLN CB HB3 sing N N 141 GLN CG CD sing N N 142 GLN CG HG2 sing N N 143 GLN CG HG3 sing N N 144 GLN CD OE1 doub N N 145 GLN CD NE2 sing N N 146 GLN NE2 HE21 sing N N 147 GLN NE2 HE22 sing N N 148 GLN OXT HXT sing N N 149 GLU N CA sing N N 150 GLU N H sing N N 151 GLU N H2 sing N N 152 GLU CA C sing N N 153 GLU CA CB sing N N 154 GLU CA HA sing N N 155 GLU C O doub N N 156 GLU C OXT sing N N 157 GLU CB CG sing N N 158 GLU CB HB2 sing N N 159 GLU CB HB3 sing N N 160 GLU CG CD sing N N 161 GLU CG HG2 sing N N 162 GLU CG HG3 sing N N 163 GLU CD OE1 doub N N 164 GLU CD OE2 sing N N 165 GLU OE2 HE2 sing N N 166 GLU OXT HXT sing N N 167 GLY N CA sing N N 168 GLY N H sing N N 169 GLY N H2 sing N N 170 GLY CA C sing N N 171 GLY CA HA2 sing N N 172 GLY CA HA3 sing N N 173 GLY C O doub N N 174 GLY C OXT sing N N 175 GLY OXT HXT sing N N 176 HIS N CA sing N N 177 HIS N H sing N N 178 HIS N H2 sing N N 179 HIS CA C sing N N 180 HIS CA CB sing N N 181 HIS CA HA sing N N 182 HIS C O doub N N 183 HIS C OXT sing N N 184 HIS CB CG sing N N 185 HIS CB HB2 sing N N 186 HIS CB HB3 sing N N 187 HIS CG ND1 sing Y N 188 HIS CG CD2 doub Y N 189 HIS ND1 CE1 doub Y N 190 HIS ND1 HD1 sing N N 191 HIS CD2 NE2 sing Y N 192 HIS CD2 HD2 sing N N 193 HIS CE1 NE2 sing Y N 194 HIS CE1 HE1 sing N N 195 HIS NE2 HE2 sing N N 196 HIS OXT HXT sing N N 197 HOH O H1 sing N N 198 HOH O H2 sing N N 199 ILE N CA sing N N 200 ILE N H sing N N 201 ILE N H2 sing N N 202 ILE CA C sing N N 203 ILE CA CB sing N N 204 ILE CA HA sing N N 205 ILE C O doub N N 206 ILE C OXT sing N N 207 ILE CB CG1 sing N N 208 ILE CB CG2 sing N N 209 ILE CB HB sing N N 210 ILE CG1 CD1 sing N N 211 ILE CG1 HG12 sing N N 212 ILE CG1 HG13 sing N N 213 ILE CG2 HG21 sing N N 214 ILE CG2 HG22 sing N N 215 ILE CG2 HG23 sing N N 216 ILE CD1 HD11 sing N N 217 ILE CD1 HD12 sing N N 218 ILE CD1 HD13 sing N N 219 ILE OXT HXT sing N N 220 LEU N CA sing N N 221 LEU N H sing N N 222 LEU N H2 sing N N 223 LEU CA C sing N N 224 LEU CA CB sing N N 225 LEU CA HA sing N N 226 LEU C O doub N N 227 LEU C OXT sing N N 228 LEU CB CG sing N N 229 LEU CB HB2 sing N N 230 LEU CB HB3 sing N N 231 LEU CG CD1 sing N N 232 LEU CG CD2 sing N N 233 LEU CG HG sing N N 234 LEU CD1 HD11 sing N N 235 LEU CD1 HD12 sing N N 236 LEU CD1 HD13 sing N N 237 LEU CD2 HD21 sing N N 238 LEU CD2 HD22 sing N N 239 LEU CD2 HD23 sing N N 240 LEU OXT HXT sing N N 241 LYS N CA sing N N 242 LYS N H sing N N 243 LYS N H2 sing N N 244 LYS CA C sing N N 245 LYS CA CB sing N N 246 LYS CA HA sing N N 247 LYS C O doub N N 248 LYS C OXT sing N N 249 LYS CB CG sing N N 250 LYS CB HB2 sing N N 251 LYS CB HB3 sing N N 252 LYS CG CD sing N N 253 LYS CG HG2 sing N N 254 LYS CG HG3 sing N N 255 LYS CD CE sing N N 256 LYS CD HD2 sing N N 257 LYS CD HD3 sing N N 258 LYS CE NZ sing N N 259 LYS CE HE2 sing N N 260 LYS CE HE3 sing N N 261 LYS NZ HZ1 sing N N 262 LYS NZ HZ2 sing N N 263 LYS NZ HZ3 sing N N 264 LYS OXT HXT sing N N 265 MET N CA sing N N 266 MET N H sing N N 267 MET N H2 sing N N 268 MET CA C sing N N 269 MET CA CB sing N N 270 MET CA HA sing N N 271 MET C O doub N N 272 MET C OXT sing N N 273 MET CB CG sing N N 274 MET CB HB2 sing N N 275 MET CB HB3 sing N N 276 MET CG SD sing N N 277 MET CG HG2 sing N N 278 MET CG HG3 sing N N 279 MET SD CE sing N N 280 MET CE HE1 sing N N 281 MET CE HE2 sing N N 282 MET CE HE3 sing N N 283 MET OXT HXT sing N N 284 MRD C1 C2 sing N N 285 MRD C1 H1C1 sing N N 286 MRD C1 H1C2 sing N N 287 MRD C1 H1C3 sing N N 288 MRD C2 O2 sing N N 289 MRD C2 CM sing N N 290 MRD C2 C3 sing N N 291 MRD O2 H2 sing N N 292 MRD CM HMC1 sing N N 293 MRD CM HMC2 sing N N 294 MRD CM HMC3 sing N N 295 MRD C3 C4 sing N N 296 MRD C3 H3C1 sing N N 297 MRD C3 H3C2 sing N N 298 MRD C4 O4 sing N N 299 MRD C4 C5 sing N N 300 MRD C4 H4 sing N N 301 MRD O4 HA sing N N 302 MRD C5 H5C1 sing N N 303 MRD C5 H5C2 sing N N 304 MRD C5 H5C3 sing N N 305 PHE N CA sing N N 306 PHE N H sing N N 307 PHE N H2 sing N N 308 PHE CA C sing N N 309 PHE CA CB sing N N 310 PHE CA HA sing N N 311 PHE C O doub N N 312 PHE C OXT sing N N 313 PHE CB CG sing N N 314 PHE CB HB2 sing N N 315 PHE CB HB3 sing N N 316 PHE CG CD1 doub Y N 317 PHE CG CD2 sing Y N 318 PHE CD1 CE1 sing Y N 319 PHE CD1 HD1 sing N N 320 PHE CD2 CE2 doub Y N 321 PHE CD2 HD2 sing N N 322 PHE CE1 CZ doub Y N 323 PHE CE1 HE1 sing N N 324 PHE CE2 CZ sing Y N 325 PHE CE2 HE2 sing N N 326 PHE CZ HZ sing N N 327 PHE OXT HXT sing N N 328 PRO N CA sing N N 329 PRO N CD sing N N 330 PRO N H sing N N 331 PRO CA C sing N N 332 PRO CA CB sing N N 333 PRO CA HA sing N N 334 PRO C O doub N N 335 PRO C OXT sing N N 336 PRO CB CG sing N N 337 PRO CB HB2 sing N N 338 PRO CB HB3 sing N N 339 PRO CG CD sing N N 340 PRO CG HG2 sing N N 341 PRO CG HG3 sing N N 342 PRO CD HD2 sing N N 343 PRO CD HD3 sing N N 344 PRO OXT HXT sing N N 345 SER N CA sing N N 346 SER N H sing N N 347 SER N H2 sing N N 348 SER CA C sing N N 349 SER CA CB sing N N 350 SER CA HA sing N N 351 SER C O doub N N 352 SER C OXT sing N N 353 SER CB OG sing N N 354 SER CB HB2 sing N N 355 SER CB HB3 sing N N 356 SER OG HG sing N N 357 SER OXT HXT sing N N 358 SIA C1 C2 sing N N 359 SIA C1 O1A doub N N 360 SIA C1 O1B sing N N 361 SIA C2 C3 sing N N 362 SIA C2 O2 sing N N 363 SIA C2 O6 sing N N 364 SIA C3 C4 sing N N 365 SIA C3 H32 sing N N 366 SIA C3 H31 sing N N 367 SIA C4 C5 sing N N 368 SIA C4 O4 sing N N 369 SIA C4 H4 sing N N 370 SIA C5 C6 sing N N 371 SIA C5 N5 sing N N 372 SIA C5 H5 sing N N 373 SIA C6 C7 sing N N 374 SIA C6 O6 sing N N 375 SIA C6 H6 sing N N 376 SIA C7 C8 sing N N 377 SIA C7 O7 sing N N 378 SIA C7 H7 sing N N 379 SIA C8 C9 sing N N 380 SIA C8 O8 sing N N 381 SIA C8 H8 sing N N 382 SIA C9 O9 sing N N 383 SIA C9 H92 sing N N 384 SIA C9 H91 sing N N 385 SIA C10 C11 sing N N 386 SIA C10 N5 sing N N 387 SIA C10 O10 doub N N 388 SIA C11 H111 sing N N 389 SIA C11 H113 sing N N 390 SIA C11 H112 sing N N 391 SIA N5 HN5 sing N N 392 SIA O1B HO1B sing N N 393 SIA O2 HO2 sing N N 394 SIA O4 HO4 sing N N 395 SIA O7 HO7 sing N N 396 SIA O8 HO8 sing N N 397 SIA O9 HO9 sing N N 398 THR N CA sing N N 399 THR N H sing N N 400 THR N H2 sing N N 401 THR CA C sing N N 402 THR CA CB sing N N 403 THR CA HA sing N N 404 THR C O doub N N 405 THR C OXT sing N N 406 THR CB OG1 sing N N 407 THR CB CG2 sing N N 408 THR CB HB sing N N 409 THR OG1 HG1 sing N N 410 THR CG2 HG21 sing N N 411 THR CG2 HG22 sing N N 412 THR CG2 HG23 sing N N 413 THR OXT HXT sing N N 414 TRP N CA sing N N 415 TRP N H sing N N 416 TRP N H2 sing N N 417 TRP CA C sing N N 418 TRP CA CB sing N N 419 TRP CA HA sing N N 420 TRP C O doub N N 421 TRP C OXT sing N N 422 TRP CB CG sing N N 423 TRP CB HB2 sing N N 424 TRP CB HB3 sing N N 425 TRP CG CD1 doub Y N 426 TRP CG CD2 sing Y N 427 TRP CD1 NE1 sing Y N 428 TRP CD1 HD1 sing N N 429 TRP CD2 CE2 doub Y N 430 TRP CD2 CE3 sing Y N 431 TRP NE1 CE2 sing Y N 432 TRP NE1 HE1 sing N N 433 TRP CE2 CZ2 sing Y N 434 TRP CE3 CZ3 doub Y N 435 TRP CE3 HE3 sing N N 436 TRP CZ2 CH2 doub Y N 437 TRP CZ2 HZ2 sing N N 438 TRP CZ3 CH2 sing Y N 439 TRP CZ3 HZ3 sing N N 440 TRP CH2 HH2 sing N N 441 TRP OXT HXT sing N N 442 TYR N CA sing N N 443 TYR N H sing N N 444 TYR N H2 sing N N 445 TYR CA C sing N N 446 TYR CA CB sing N N 447 TYR CA HA sing N N 448 TYR C O doub N N 449 TYR C OXT sing N N 450 TYR CB CG sing N N 451 TYR CB HB2 sing N N 452 TYR CB HB3 sing N N 453 TYR CG CD1 doub Y N 454 TYR CG CD2 sing Y N 455 TYR CD1 CE1 sing Y N 456 TYR CD1 HD1 sing N N 457 TYR CD2 CE2 doub Y N 458 TYR CD2 HD2 sing N N 459 TYR CE1 CZ doub Y N 460 TYR CE1 HE1 sing N N 461 TYR CE2 CZ sing Y N 462 TYR CE2 HE2 sing N N 463 TYR CZ OH sing N N 464 TYR OH HH sing N N 465 TYR OXT HXT sing N N 466 VAL N CA sing N N 467 VAL N H sing N N 468 VAL N H2 sing N N 469 VAL CA C sing N N 470 VAL CA CB sing N N 471 VAL CA HA sing N N 472 VAL C O doub N N 473 VAL C OXT sing N N 474 VAL CB CG1 sing N N 475 VAL CB CG2 sing N N 476 VAL CB HB sing N N 477 VAL CG1 HG11 sing N N 478 VAL CG1 HG12 sing N N 479 VAL CG1 HG13 sing N N 480 VAL CG2 HG21 sing N N 481 VAL CG2 HG22 sing N N 482 VAL CG2 HG23 sing N N 483 VAL OXT HXT sing N N 484 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 GLC 1 C GLC 1 A GLC 6537 n C 2 GAL 2 C GAL 2 A GAL 6536 n C 2 SIA 3 C SIA 3 A SIA 6535 n D 2 GLC 1 D GLC 1 B GLC 6537 n D 2 GAL 2 D GAL 2 B GAL 6536 n D 2 SIA 3 D SIA 3 B SIA 6535 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc SIA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DNeup5Aca SIA 'COMMON NAME' GMML 1.0 'N-acetyl-a-D-neuraminic acid' SIA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Neup5Ac SIA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Neu5Ac # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DNeup5Aca2-3DGalpb1-4DGlcpa1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,3,2/[a2122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3/a4-b1_b3-c2' WURCS PDB2Glycan 1.1.0 3 2 '[][a-D-Glcp]{[(4+1)][b-D-Galp]{[(3+2)][a-D-Neup5Ac]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 GAL C1 O1 1 GLC O4 HO4 sing ? 2 2 3 SIA C2 O2 2 GAL O3 HO3 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GLC 1 n 2 GAL 2 n 2 SIA 3 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SODIUM ION' NA 4 '(4R)-2-METHYLPENTANE-2,4-DIOL' MRD 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2I2S _pdbx_initial_refinement_model.details 'PDB ENTRY 2I2S' #