data_3TL4 # _entry.id 3TL4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3TL4 RCSB RCSB067612 WWPDB D_1000067612 # _pdbx_database_status.entry_id 3TL4 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-08-29 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Grant, T.D.' 1 'Snell, E.H.' 2 # _citation.id primary _citation.title 'Structural conservation of an ancient tRNA sensor in eukaryotic glutaminyl-tRNA synthetase.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 40 _citation.page_first 3723 _citation.page_last 3731 _citation.year 2012 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22180531 _citation.pdbx_database_id_DOI 10.1093/nar/gkr1223 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Grant, T.D.' 1 primary 'Snell, E.H.' 2 primary 'Luft, J.R.' 3 primary 'Quartley, E.' 4 primary 'Corretore, S.' 5 primary 'Wolfley, J.R.' 6 primary 'Snell, M.E.' 7 primary 'Hadd, A.' 8 primary 'Perona, J.J.' 9 primary 'Phizicky, E.M.' 10 primary 'Grayhack, E.J.' 11 # _cell.length_a 40.800 _cell.length_b 34.620 _cell.length_c 74.269 _cell.angle_alpha 90.000 _cell.angle_beta 97.610 _cell.angle_gamma 90.000 _cell.entry_id 3TL4 _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 3TL4 _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Glutaminyl-tRNA synthetase' 21501.047 1 6.1.1.18 ? 'tRNA Binding Domain (UNP residues 1-187)' ? 2 water nat water 18.015 82 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Glutamine--tRNA ligase, GlnRS' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)SSVEELTQLFSQVGFEDKKVKEIVKNKKVSDSLYKLIKETPSDYQWNKSTRALVHNLASFVKGTDLPKSELIVNG IINGDLKTSLQVDAAFKYVKANGEASTK(MSE)G(MSE)NENSGVGIEITEDQVRNYV(MSE)QYIQENKERILTERYKL VPGIFADVKNLKELKWADPRSFKPIIDQEVLKLLGPKDERDLI ; _entity_poly.pdbx_seq_one_letter_code_can ;MSSVEELTQLFSQVGFEDKKVKEIVKNKKVSDSLYKLIKETPSDYQWNKSTRALVHNLASFVKGTDLPKSELIVNGIING DLKTSLQVDAAFKYVKANGEASTKMGMNENSGVGIEITEDQVRNYVMQYIQENKERILTERYKLVPGIFADVKNLKELKW ADPRSFKPIIDQEVLKLLGPKDERDLI ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 SER n 1 3 SER n 1 4 VAL n 1 5 GLU n 1 6 GLU n 1 7 LEU n 1 8 THR n 1 9 GLN n 1 10 LEU n 1 11 PHE n 1 12 SER n 1 13 GLN n 1 14 VAL n 1 15 GLY n 1 16 PHE n 1 17 GLU n 1 18 ASP n 1 19 LYS n 1 20 LYS n 1 21 VAL n 1 22 LYS n 1 23 GLU n 1 24 ILE n 1 25 VAL n 1 26 LYS n 1 27 ASN n 1 28 LYS n 1 29 LYS n 1 30 VAL n 1 31 SER n 1 32 ASP n 1 33 SER n 1 34 LEU n 1 35 TYR n 1 36 LYS n 1 37 LEU n 1 38 ILE n 1 39 LYS n 1 40 GLU n 1 41 THR n 1 42 PRO n 1 43 SER n 1 44 ASP n 1 45 TYR n 1 46 GLN n 1 47 TRP n 1 48 ASN n 1 49 LYS n 1 50 SER n 1 51 THR n 1 52 ARG n 1 53 ALA n 1 54 LEU n 1 55 VAL n 1 56 HIS n 1 57 ASN n 1 58 LEU n 1 59 ALA n 1 60 SER n 1 61 PHE n 1 62 VAL n 1 63 LYS n 1 64 GLY n 1 65 THR n 1 66 ASP n 1 67 LEU n 1 68 PRO n 1 69 LYS n 1 70 SER n 1 71 GLU n 1 72 LEU n 1 73 ILE n 1 74 VAL n 1 75 ASN n 1 76 GLY n 1 77 ILE n 1 78 ILE n 1 79 ASN n 1 80 GLY n 1 81 ASP n 1 82 LEU n 1 83 LYS n 1 84 THR n 1 85 SER n 1 86 LEU n 1 87 GLN n 1 88 VAL n 1 89 ASP n 1 90 ALA n 1 91 ALA n 1 92 PHE n 1 93 LYS n 1 94 TYR n 1 95 VAL n 1 96 LYS n 1 97 ALA n 1 98 ASN n 1 99 GLY n 1 100 GLU n 1 101 ALA n 1 102 SER n 1 103 THR n 1 104 LYS n 1 105 MSE n 1 106 GLY n 1 107 MSE n 1 108 ASN n 1 109 GLU n 1 110 ASN n 1 111 SER n 1 112 GLY n 1 113 VAL n 1 114 GLY n 1 115 ILE n 1 116 GLU n 1 117 ILE n 1 118 THR n 1 119 GLU n 1 120 ASP n 1 121 GLN n 1 122 VAL n 1 123 ARG n 1 124 ASN n 1 125 TYR n 1 126 VAL n 1 127 MSE n 1 128 GLN n 1 129 TYR n 1 130 ILE n 1 131 GLN n 1 132 GLU n 1 133 ASN n 1 134 LYS n 1 135 GLU n 1 136 ARG n 1 137 ILE n 1 138 LEU n 1 139 THR n 1 140 GLU n 1 141 ARG n 1 142 TYR n 1 143 LYS n 1 144 LEU n 1 145 VAL n 1 146 PRO n 1 147 GLY n 1 148 ILE n 1 149 PHE n 1 150 ALA n 1 151 ASP n 1 152 VAL n 1 153 LYS n 1 154 ASN n 1 155 LEU n 1 156 LYS n 1 157 GLU n 1 158 LEU n 1 159 LYS n 1 160 TRP n 1 161 ALA n 1 162 ASP n 1 163 PRO n 1 164 ARG n 1 165 SER n 1 166 PHE n 1 167 LYS n 1 168 PRO n 1 169 ILE n 1 170 ILE n 1 171 ASP n 1 172 GLN n 1 173 GLU n 1 174 VAL n 1 175 LEU n 1 176 LYS n 1 177 LEU n 1 178 LEU n 1 179 GLY n 1 180 PRO n 1 181 LYS n 1 182 ASP n 1 183 GLU n 1 184 ARG n 1 185 ASP n 1 186 LEU n 1 187 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'GLN4, O3601, YOR168W' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4932 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BCY123 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name BG2483 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SYQ_YEAST _struct_ref.pdbx_db_accession P13188 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSSVEELTQLFSQVGFEDKKVKEIVKNKKVSDSLYKLIKETPSDYQWNKSTRALVHNLASFVKGTDLPKSELIVNGIING DLKTSLQVDAAFKYVKANGEASTKMGMNENSGVGIEITEDQVRNYVMQYIQENKERILTERYKLVPGIFADVKNLKELKW ADPRSFKPIIDQEVLKLLGPKDERDLI ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3TL4 _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 187 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P13188 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 187 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 187 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3TL4 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.42 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 49.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'microbatch under oil' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.pdbx_details '100mM KCl, 100mM Tris, 20% (w/v) PEG 4000, pH 8.0, microbatch under oil, temperature 295K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2010-07-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator 'Side scattering bent cube-root I-beam single crystal; asymmetric cut 4.965 degs' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97904 1.0 2 0.91162 1.0 3 0.97937 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.97904, 0.91162, 0.97937' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL11-1 # _reflns.entry_id 3TL4 _reflns.d_resolution_high 2.300 _reflns.d_resolution_low 73.615 _reflns.number_all 9393 _reflns.number_obs 9393 _reflns.pdbx_netI_over_sigmaI 13.000 _reflns.pdbx_Rsym_value 0.100 _reflns.pdbx_redundancy 6.500 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.300 2.420 ? 9002 ? 0.490 1.600 0.490 ? 6.600 ? 1360 100.000 1 1 2.420 2.570 ? 8515 ? 0.358 2.200 0.358 ? 6.600 ? 1284 100.000 2 1 2.570 2.750 ? 7872 ? 0.289 2.700 0.289 ? 6.600 ? 1188 100.000 3 1 2.750 2.970 ? 7613 ? 0.192 4.000 0.192 ? 6.600 ? 1147 100.000 4 1 2.970 3.250 ? 6724 ? 0.125 6.100 0.125 ? 6.600 ? 1018 100.000 5 1 3.250 3.640 ? 6282 ? 0.076 9.800 0.076 ? 6.600 ? 954 100.000 6 1 3.640 4.200 ? 5444 ? 0.058 12.400 0.058 ? 6.500 ? 839 100.000 7 1 4.200 5.140 ? 4634 ? 0.050 13.800 0.050 ? 6.400 ? 721 100.000 8 1 5.140 7.270 ? 3537 ? 0.054 12.900 0.054 ? 6.300 ? 562 100.000 9 1 7.270 26.299 ? 1866 ? 0.033 19.200 0.033 ? 5.800 ? 320 98.300 10 1 # _refine.entry_id 3TL4 _refine.ls_d_res_high 2.3000 _refine.ls_d_res_low 26.2990 _refine.pdbx_ls_sigma_F 1.380 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.9800 _refine.ls_number_reflns_obs 9385 _refine.ls_number_reflns_all 9394 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1837 _refine.ls_R_factor_R_work 0.1822 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2110 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.7700 _refine.ls_number_reflns_R_free 448 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 35.0726 _refine.solvent_model_param_bsol 31.4020 _refine.solvent_model_param_ksol 0.3510 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -3.6216 _refine.aniso_B[2][2] -0.8709 _refine.aniso_B[3][3] 4.9143 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 2.6902 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.6000 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9500 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 287.140 _refine.B_iso_min 9.350 _refine.pdbx_overall_phase_error 20.4300 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1489 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 82 _refine_hist.number_atoms_total 1571 _refine_hist.d_res_high 2.3000 _refine_hist.d_res_low 26.2990 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1511 0.007 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 2033 1.034 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 231 0.077 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 259 0.004 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 587 14.390 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.3001 2.6327 3 100.0000 2936 . 0.2314 0.2616 . 142 . 3078 . . 'X-RAY DIFFRACTION' 2.6327 3.3159 3 100.0000 2972 . 0.1949 0.2837 . 142 . 3114 . . 'X-RAY DIFFRACTION' 3.3159 26.3011 3 100.0000 3029 . 0.1606 0.1702 . 164 . 3193 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3TL4 _struct.title 'Crystal Structure of the tRNA Binding Domain of Glutaminyl-tRNA Synthetase from Saccharomyces cerevisiae' _struct.pdbx_descriptor 'Glutaminyl-tRNA synthetase (E.C.6.1.1.18)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3TL4 _struct_keywords.text 'glutamine, tRNA synthetase, appended domain, hinge, tRNA ligase, amidotransferase, LIGASE' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 3 ? VAL A 14 ? SER X 3 VAL X 14 1 ? 12 HELX_P HELX_P2 2 GLU A 17 ? VAL A 25 ? GLU X 17 VAL X 25 1 ? 9 HELX_P HELX_P3 3 ASN A 27 ? GLU A 40 ? ASN X 27 GLU X 40 1 ? 14 HELX_P HELX_P4 4 ASN A 48 ? LYS A 63 ? ASN X 48 LYS X 63 1 ? 16 HELX_P HELX_P5 5 LYS A 69 ? ASN A 79 ? LYS X 69 ASN X 79 1 ? 11 HELX_P HELX_P6 6 THR A 84 ? GLY A 99 ? THR X 84 GLY X 99 1 ? 16 HELX_P HELX_P7 7 GLU A 100 ? SER A 102 ? GLU X 100 SER X 102 5 ? 3 HELX_P HELX_P8 8 THR A 103 ? ASN A 110 ? THR X 103 ASN X 110 1 ? 8 HELX_P HELX_P9 9 THR A 118 ? ASN A 133 ? THR X 118 ASN X 133 1 ? 16 HELX_P HELX_P10 10 ASN A 133 ? ARG A 141 ? ASN X 133 ARG X 141 1 ? 9 HELX_P HELX_P11 11 LEU A 144 ? ASN A 154 ? LEU X 144 ASN X 154 1 ? 11 HELX_P HELX_P12 12 LEU A 155 ? LYS A 159 ? LEU X 155 LYS X 159 5 ? 5 HELX_P HELX_P13 13 SER A 165 ? GLY A 179 ? SER X 165 GLY X 179 1 ? 15 HELX_P HELX_P14 14 ASP A 182 ? LEU A 186 ? ASP X 182 LEU X 186 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LYS 104 C ? ? ? 1_555 A MSE 105 N ? ? X LYS 104 X MSE 105 1_555 ? ? ? ? ? ? ? 1.335 ? covale2 covale ? ? A MSE 105 C ? ? ? 1_555 A GLY 106 N ? ? X MSE 105 X GLY 106 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale ? ? A GLY 106 C ? ? ? 1_555 A MSE 107 N ? ? X GLY 106 X MSE 107 1_555 ? ? ? ? ? ? ? 1.323 ? covale4 covale ? ? A MSE 107 C ? ? ? 1_555 A ASN 108 N ? ? X MSE 107 X ASN 108 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A VAL 126 C ? ? ? 1_555 A MSE 127 N ? ? X VAL 126 X MSE 127 1_555 ? ? ? ? ? ? ? 1.330 ? covale6 covale ? ? A MSE 127 C ? ? ? 1_555 A GLN 128 N ? ? X MSE 127 X GLN 128 1_555 ? ? ? ? ? ? ? 1.324 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 3TL4 _atom_sites.fract_transf_matrix[1][1] 0.024510 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003276 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028885 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013584 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? X . n A 1 2 SER 2 2 2 SER SER X . n A 1 3 SER 3 3 3 SER SER X . n A 1 4 VAL 4 4 4 VAL VAL X . n A 1 5 GLU 5 5 5 GLU GLU X . n A 1 6 GLU 6 6 6 GLU GLU X . n A 1 7 LEU 7 7 7 LEU LEU X . n A 1 8 THR 8 8 8 THR THR X . n A 1 9 GLN 9 9 9 GLN GLN X . n A 1 10 LEU 10 10 10 LEU LEU X . n A 1 11 PHE 11 11 11 PHE PHE X . n A 1 12 SER 12 12 12 SER SER X . n A 1 13 GLN 13 13 13 GLN GLN X . n A 1 14 VAL 14 14 14 VAL VAL X . n A 1 15 GLY 15 15 15 GLY GLY X . n A 1 16 PHE 16 16 16 PHE PHE X . n A 1 17 GLU 17 17 17 GLU GLU X . n A 1 18 ASP 18 18 18 ASP ASP X . n A 1 19 LYS 19 19 19 LYS LYS X . n A 1 20 LYS 20 20 20 LYS LYS X . n A 1 21 VAL 21 21 21 VAL VAL X . n A 1 22 LYS 22 22 22 LYS LYS X . n A 1 23 GLU 23 23 23 GLU GLU X . n A 1 24 ILE 24 24 24 ILE ILE X . n A 1 25 VAL 25 25 25 VAL VAL X . n A 1 26 LYS 26 26 26 LYS LYS X . n A 1 27 ASN 27 27 27 ASN ASN X . n A 1 28 LYS 28 28 28 LYS LYS X . n A 1 29 LYS 29 29 29 LYS LYS X . n A 1 30 VAL 30 30 30 VAL VAL X . n A 1 31 SER 31 31 31 SER SER X . n A 1 32 ASP 32 32 32 ASP ASP X . n A 1 33 SER 33 33 33 SER SER X . n A 1 34 LEU 34 34 34 LEU LEU X . n A 1 35 TYR 35 35 35 TYR TYR X . n A 1 36 LYS 36 36 36 LYS LYS X . n A 1 37 LEU 37 37 37 LEU LEU X . n A 1 38 ILE 38 38 38 ILE ILE X . n A 1 39 LYS 39 39 39 LYS LYS X . n A 1 40 GLU 40 40 40 GLU GLU X . n A 1 41 THR 41 41 41 THR THR X . n A 1 42 PRO 42 42 42 PRO PRO X . n A 1 43 SER 43 43 43 SER SER X . n A 1 44 ASP 44 44 44 ASP ASP X . n A 1 45 TYR 45 45 45 TYR TYR X . n A 1 46 GLN 46 46 46 GLN GLN X . n A 1 47 TRP 47 47 47 TRP TRP X . n A 1 48 ASN 48 48 48 ASN ASN X . n A 1 49 LYS 49 49 49 LYS LYS X . n A 1 50 SER 50 50 50 SER SER X . n A 1 51 THR 51 51 51 THR THR X . n A 1 52 ARG 52 52 52 ARG ARG X . n A 1 53 ALA 53 53 53 ALA ALA X . n A 1 54 LEU 54 54 54 LEU LEU X . n A 1 55 VAL 55 55 55 VAL VAL X . n A 1 56 HIS 56 56 56 HIS HIS X . n A 1 57 ASN 57 57 57 ASN ASN X . n A 1 58 LEU 58 58 58 LEU LEU X . n A 1 59 ALA 59 59 59 ALA ALA X . n A 1 60 SER 60 60 60 SER SER X . n A 1 61 PHE 61 61 61 PHE PHE X . n A 1 62 VAL 62 62 62 VAL VAL X . n A 1 63 LYS 63 63 63 LYS LYS X . n A 1 64 GLY 64 64 64 GLY GLY X . n A 1 65 THR 65 65 65 THR THR X . n A 1 66 ASP 66 66 66 ASP ASP X . n A 1 67 LEU 67 67 67 LEU LEU X . n A 1 68 PRO 68 68 68 PRO PRO X . n A 1 69 LYS 69 69 69 LYS LYS X . n A 1 70 SER 70 70 70 SER SER X . n A 1 71 GLU 71 71 71 GLU GLU X . n A 1 72 LEU 72 72 72 LEU LEU X . n A 1 73 ILE 73 73 73 ILE ILE X . n A 1 74 VAL 74 74 74 VAL VAL X . n A 1 75 ASN 75 75 75 ASN ASN X . n A 1 76 GLY 76 76 76 GLY GLY X . n A 1 77 ILE 77 77 77 ILE ILE X . n A 1 78 ILE 78 78 78 ILE ILE X . n A 1 79 ASN 79 79 79 ASN ASN X . n A 1 80 GLY 80 80 80 GLY GLY X . n A 1 81 ASP 81 81 81 ASP ASP X . n A 1 82 LEU 82 82 82 LEU LEU X . n A 1 83 LYS 83 83 83 LYS LYS X . n A 1 84 THR 84 84 84 THR THR X . n A 1 85 SER 85 85 85 SER SER X . n A 1 86 LEU 86 86 86 LEU LEU X . n A 1 87 GLN 87 87 87 GLN GLN X . n A 1 88 VAL 88 88 88 VAL VAL X . n A 1 89 ASP 89 89 89 ASP ASP X . n A 1 90 ALA 90 90 90 ALA ALA X . n A 1 91 ALA 91 91 91 ALA ALA X . n A 1 92 PHE 92 92 92 PHE PHE X . n A 1 93 LYS 93 93 93 LYS LYS X . n A 1 94 TYR 94 94 94 TYR TYR X . n A 1 95 VAL 95 95 95 VAL VAL X . n A 1 96 LYS 96 96 96 LYS LYS X . n A 1 97 ALA 97 97 97 ALA ALA X . n A 1 98 ASN 98 98 98 ASN ASN X . n A 1 99 GLY 99 99 99 GLY GLY X . n A 1 100 GLU 100 100 100 GLU GLU X . n A 1 101 ALA 101 101 101 ALA ALA X . n A 1 102 SER 102 102 102 SER SER X . n A 1 103 THR 103 103 103 THR THR X . n A 1 104 LYS 104 104 104 LYS LYS X . n A 1 105 MSE 105 105 105 MSE MSE X . n A 1 106 GLY 106 106 106 GLY GLY X . n A 1 107 MSE 107 107 107 MSE MSE X . n A 1 108 ASN 108 108 108 ASN ASN X . n A 1 109 GLU 109 109 109 GLU GLU X . n A 1 110 ASN 110 110 110 ASN ASN X . n A 1 111 SER 111 111 111 SER SER X . n A 1 112 GLY 112 112 112 GLY GLY X . n A 1 113 VAL 113 113 113 VAL VAL X . n A 1 114 GLY 114 114 114 GLY GLY X . n A 1 115 ILE 115 115 115 ILE ILE X . n A 1 116 GLU 116 116 116 GLU GLU X . n A 1 117 ILE 117 117 117 ILE ILE X . n A 1 118 THR 118 118 118 THR THR X . n A 1 119 GLU 119 119 119 GLU GLU X . n A 1 120 ASP 120 120 120 ASP ASP X . n A 1 121 GLN 121 121 121 GLN GLN X . n A 1 122 VAL 122 122 122 VAL VAL X . n A 1 123 ARG 123 123 123 ARG ARG X . n A 1 124 ASN 124 124 124 ASN ASN X . n A 1 125 TYR 125 125 125 TYR TYR X . n A 1 126 VAL 126 126 126 VAL VAL X . n A 1 127 MSE 127 127 127 MSE MSE X . n A 1 128 GLN 128 128 128 GLN GLN X . n A 1 129 TYR 129 129 129 TYR TYR X . n A 1 130 ILE 130 130 130 ILE ILE X . n A 1 131 GLN 131 131 131 GLN GLN X . n A 1 132 GLU 132 132 132 GLU GLU X . n A 1 133 ASN 133 133 133 ASN ASN X . n A 1 134 LYS 134 134 134 LYS LYS X . n A 1 135 GLU 135 135 135 GLU GLU X . n A 1 136 ARG 136 136 136 ARG ARG X . n A 1 137 ILE 137 137 137 ILE ILE X . n A 1 138 LEU 138 138 138 LEU LEU X . n A 1 139 THR 139 139 139 THR THR X . n A 1 140 GLU 140 140 140 GLU GLU X . n A 1 141 ARG 141 141 141 ARG ARG X . n A 1 142 TYR 142 142 142 TYR TYR X . n A 1 143 LYS 143 143 143 LYS LYS X . n A 1 144 LEU 144 144 144 LEU LEU X . n A 1 145 VAL 145 145 145 VAL VAL X . n A 1 146 PRO 146 146 146 PRO PRO X . n A 1 147 GLY 147 147 147 GLY GLY X . n A 1 148 ILE 148 148 148 ILE ILE X . n A 1 149 PHE 149 149 149 PHE PHE X . n A 1 150 ALA 150 150 150 ALA ALA X . n A 1 151 ASP 151 151 151 ASP ASP X . n A 1 152 VAL 152 152 152 VAL VAL X . n A 1 153 LYS 153 153 153 LYS LYS X . n A 1 154 ASN 154 154 154 ASN ASN X . n A 1 155 LEU 155 155 155 LEU LEU X . n A 1 156 LYS 156 156 156 LYS LYS X . n A 1 157 GLU 157 157 157 GLU GLU X . n A 1 158 LEU 158 158 158 LEU LEU X . n A 1 159 LYS 159 159 159 LYS LYS X . n A 1 160 TRP 160 160 160 TRP TRP X . n A 1 161 ALA 161 161 161 ALA ALA X . n A 1 162 ASP 162 162 162 ASP ASP X . n A 1 163 PRO 163 163 163 PRO PRO X . n A 1 164 ARG 164 164 164 ARG ARG X . n A 1 165 SER 165 165 165 SER SER X . n A 1 166 PHE 166 166 166 PHE PHE X . n A 1 167 LYS 167 167 167 LYS LYS X . n A 1 168 PRO 168 168 168 PRO PRO X . n A 1 169 ILE 169 169 169 ILE ILE X . n A 1 170 ILE 170 170 170 ILE ILE X . n A 1 171 ASP 171 171 171 ASP ASP X . n A 1 172 GLN 172 172 172 GLN GLN X . n A 1 173 GLU 173 173 173 GLU GLU X . n A 1 174 VAL 174 174 174 VAL VAL X . n A 1 175 LEU 175 175 175 LEU LEU X . n A 1 176 LYS 176 176 176 LYS LYS X . n A 1 177 LEU 177 177 177 LEU LEU X . n A 1 178 LEU 178 178 178 LEU LEU X . n A 1 179 GLY 179 179 179 GLY GLY X . n A 1 180 PRO 180 180 180 PRO PRO X . n A 1 181 LYS 181 181 181 LYS LYS X . n A 1 182 ASP 182 182 182 ASP ASP X . n A 1 183 GLU 183 183 183 GLU GLU X . n A 1 184 ARG 184 184 184 ARG ARG X . n A 1 185 ASP 185 185 185 ASP ASP X . n A 1 186 LEU 186 186 186 LEU LEU X . n A 1 187 ILE 187 187 187 ILE ILE X . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 105 X MSE 105 ? MET SELENOMETHIONINE 2 A MSE 107 X MSE 107 ? MET SELENOMETHIONINE 3 A MSE 127 X MSE 127 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-11-30 2 'Structure model' 1 1 2011-12-28 3 'Structure model' 1 2 2012-06-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA 3.3.16 2010/01/06 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PHENIX 1.7.1_743 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 X _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 241 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 X _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 265 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU X 40 ? ? -99.45 30.89 2 1 LYS X 63 ? ? 38.67 59.90 3 1 ARG X 141 ? ? 60.38 -138.53 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id X _pdbx_unobs_or_zero_occ_residues.auth_comp_id MSE _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id MSE _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 188 1 HOH HOH X . B 2 HOH 2 189 2 HOH HOH X . B 2 HOH 3 190 3 HOH HOH X . B 2 HOH 4 191 4 HOH HOH X . B 2 HOH 5 192 5 HOH HOH X . B 2 HOH 6 193 6 HOH HOH X . B 2 HOH 7 194 7 HOH HOH X . B 2 HOH 8 195 8 HOH HOH X . B 2 HOH 9 196 9 HOH HOH X . B 2 HOH 10 197 10 HOH HOH X . B 2 HOH 11 198 11 HOH HOH X . B 2 HOH 12 199 12 HOH HOH X . B 2 HOH 13 200 13 HOH HOH X . B 2 HOH 14 201 14 HOH HOH X . B 2 HOH 15 202 15 HOH HOH X . B 2 HOH 16 203 16 HOH HOH X . B 2 HOH 17 204 17 HOH HOH X . B 2 HOH 18 205 18 HOH HOH X . B 2 HOH 19 206 19 HOH HOH X . B 2 HOH 20 207 20 HOH HOH X . B 2 HOH 21 208 21 HOH HOH X . B 2 HOH 22 209 22 HOH HOH X . B 2 HOH 23 210 23 HOH HOH X . B 2 HOH 24 211 24 HOH HOH X . B 2 HOH 25 212 25 HOH HOH X . B 2 HOH 26 213 26 HOH HOH X . B 2 HOH 27 214 27 HOH HOH X . B 2 HOH 28 215 28 HOH HOH X . B 2 HOH 29 216 29 HOH HOH X . B 2 HOH 30 217 30 HOH HOH X . B 2 HOH 31 218 31 HOH HOH X . B 2 HOH 32 219 32 HOH HOH X . B 2 HOH 33 220 33 HOH HOH X . B 2 HOH 34 221 34 HOH HOH X . B 2 HOH 35 222 35 HOH HOH X . B 2 HOH 36 223 36 HOH HOH X . B 2 HOH 37 224 37 HOH HOH X . B 2 HOH 38 225 38 HOH HOH X . B 2 HOH 39 226 39 HOH HOH X . B 2 HOH 40 227 40 HOH HOH X . B 2 HOH 41 228 41 HOH HOH X . B 2 HOH 42 229 42 HOH HOH X . B 2 HOH 43 230 43 HOH HOH X . B 2 HOH 44 231 44 HOH HOH X . B 2 HOH 45 232 45 HOH HOH X . B 2 HOH 46 233 46 HOH HOH X . B 2 HOH 47 234 47 HOH HOH X . B 2 HOH 48 235 48 HOH HOH X . B 2 HOH 49 236 49 HOH HOH X . B 2 HOH 50 237 50 HOH HOH X . B 2 HOH 51 238 51 HOH HOH X . B 2 HOH 52 239 52 HOH HOH X . B 2 HOH 53 240 53 HOH HOH X . B 2 HOH 54 241 54 HOH HOH X . B 2 HOH 55 242 55 HOH HOH X . B 2 HOH 56 243 56 HOH HOH X . B 2 HOH 57 244 57 HOH HOH X . B 2 HOH 58 245 58 HOH HOH X . B 2 HOH 59 246 59 HOH HOH X . B 2 HOH 60 247 60 HOH HOH X . B 2 HOH 61 248 61 HOH HOH X . B 2 HOH 62 249 62 HOH HOH X . B 2 HOH 63 250 63 HOH HOH X . B 2 HOH 64 251 64 HOH HOH X . B 2 HOH 65 252 65 HOH HOH X . B 2 HOH 66 253 66 HOH HOH X . B 2 HOH 67 254 67 HOH HOH X . B 2 HOH 68 255 68 HOH HOH X . B 2 HOH 69 256 69 HOH HOH X . B 2 HOH 70 257 70 HOH HOH X . B 2 HOH 71 258 71 HOH HOH X . B 2 HOH 72 259 72 HOH HOH X . B 2 HOH 73 260 73 HOH HOH X . B 2 HOH 74 261 74 HOH HOH X . B 2 HOH 75 262 75 HOH HOH X . B 2 HOH 76 263 76 HOH HOH X . B 2 HOH 77 264 77 HOH HOH X . B 2 HOH 78 265 78 HOH HOH X . B 2 HOH 79 266 79 HOH HOH X . B 2 HOH 80 267 80 HOH HOH X . B 2 HOH 81 268 81 HOH HOH X . B 2 HOH 82 269 82 HOH HOH X . #