data_3U98 # _entry.id 3U98 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3U98 pdb_00003u98 10.2210/pdb3u98/pdb RCSB RCSB068465 ? ? WWPDB D_1000068465 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3RLW . unspecified PDB 3RLY . unspecified PDB 3RM0 . unspecified PDB 3RM2 . unspecified PDB 3RML . unspecified PDB 3RMM . unspecified PDB 3U9A . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3U98 _pdbx_database_status.recvd_initial_deposition_date 2011-10-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Biela, A.' 1 'Heine, A.' 2 'Klebe, G.' 3 # _citation.id primary _citation.title 'Thrombin Inhibition' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Biela, A.' 1 ? primary 'Sielaff, F.' 2 ? primary 'Heine, A.' 3 ? primary 'Steinmetzer, T.' 4 ? primary 'Klebe, G.' 5 ? # _cell.entry_id 3U98 _cell.length_a 70.300 _cell.length_b 71.500 _cell.length_c 72.200 _cell.angle_alpha 90.00 _cell.angle_beta 100.40 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3U98 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Thrombin Light Chain' 4096.534 1 3.4.21.5 ? ? ? 2 polymer nat 'Thrombin Heavy Chain' 29780.219 1 3.4.21.5 ? ? ? 3 polymer syn 'Hirudin variant-2' 1662.683 1 ? ? 'residues in UNP 60-72' ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 non-polymer syn '(2S)-1-[(2R)-2-(benzylsulfonylamino)-5-guanidino-pentanoyl]-N-[(4-carbamimidoylphenyl)methyl]pyrrolidine-2-carboxamide' 556.680 1 ? ? ? ? 6 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 7 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 8 water nat water 18.015 344 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; H ? 3 'polypeptide(L)' no yes 'NGDFEEIPEE(TYS)LQ' NGDFEEIPEEYLQ I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n 3 1 ASN n 3 2 GLY n 3 3 ASP n 3 4 PHE n 3 5 GLU n 3 6 GLU n 3 7 ILE n 3 8 PRO n 3 9 GLU n 3 10 GLU n 3 11 TYS n 3 12 LEU n 3 13 GLN n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Hirudo medicinalis' _pdbx_entity_src_syn.organism_common_name 'Medicinal leech' _pdbx_entity_src_syn.ncbi_taxonomy_id 6421 _pdbx_entity_src_syn.details 'Synthetic Fragment of Hirudin from Hirudo Medicinalis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN P00734 1 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 ? 2 UNP THRB_HUMAN P00734 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 ? 3 UNP HIRV2_HIRME P09945 3 NGDFEEIPEEYLQ 60 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3U98 L 1 H 36 ? P00734 328 ? 363 ? 1 15 2 2 3U98 H 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 3U98 I 1 ? 13 ? P09945 60 ? 72 ? 53 65 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BJA non-polymer . '(2S)-1-[(2R)-2-(benzylsulfonylamino)-5-guanidino-pentanoyl]-N-[(4-carbamimidoylphenyl)methyl]pyrrolidine-2-carboxamide' ? 'C26 H36 N8 O4 S' 556.680 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 TYS 'L-peptide linking' n O-SULFO-L-TYROSINE ? 'C9 H11 N O6 S' 261.252 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3U98 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_percent_sol 51.01 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '15% PEG8000, 20mM sodium phosphate, 175mM sodium chloride, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.15K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.pdbx_collection_date 2009-11-04 _diffrn_detector.details 'Collimating Mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal Monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.2' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91841 # _reflns.entry_id 3U98 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.45 _reflns.number_obs 59463 _reflns.number_all 59463 _reflns.percent_possible_obs 95.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.059 _reflns.pdbx_netI_over_sigmaI 17.4 _reflns.B_iso_Wilson_estimate 12.710 _reflns.pdbx_redundancy 3.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.45 _reflns_shell.d_res_low 1.48 _reflns_shell.percent_possible_all 97.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.453 _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy 2.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3072 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3U98 _refine.ls_number_reflns_obs 56456 _refine.ls_number_reflns_all 59312 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 22.562 _refine.ls_d_res_high 1.450 _refine.ls_percent_reflns_obs 90.71 _refine.ls_R_factor_obs 0.1647 _refine.ls_R_factor_all 0.1647 _refine.ls_R_factor_R_work 0.1635 _refine.ls_R_factor_R_free 0.1868 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.06 _refine.ls_number_reflns_R_free 2856 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 21.8276 _refine.aniso_B[1][1] 2.0086 _refine.aniso_B[2][2] -1.5837 _refine.aniso_B[3][3] -0.4249 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -2.4899 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.394 _refine.solvent_model_param_bsol 50.051 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.95 _refine.pdbx_ls_cross_valid_method 'Free R' _refine.details ? _refine.pdbx_starting_model 1H8D _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.15 _refine.overall_FOM_work_R_set 0.9033 _refine.B_iso_max 93.400 _refine.B_iso_min 6.110 _refine.pdbx_overall_phase_error 16.8200 _refine.occupancy_max 1.000 _refine.occupancy_min 0.350 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2328 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 60 _refine_hist.number_atoms_solvent 344 _refine_hist.number_atoms_total 2732 _refine_hist.d_res_high 1.450 _refine_hist.d_res_low 22.562 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 2504 0.008 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3401 1.117 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 353 0.077 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 432 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 977 17.176 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 1.4500 1.4750 20 84.0000 2509 . 0.2295 0.2470 . 121 . 2630 . 'X-RAY DIFFRACTION' . 1.4750 1.5018 20 84.0000 2459 . 0.2216 0.2670 . 120 . 2579 . 'X-RAY DIFFRACTION' . 1.5018 1.5307 20 87.0000 2540 . 0.2066 0.2191 . 131 . 2671 . 'X-RAY DIFFRACTION' . 1.5307 1.5619 20 88.0000 2625 . 0.1809 0.1977 . 140 . 2765 . 'X-RAY DIFFRACTION' . 1.5619 1.5959 20 91.0000 2631 . 0.1681 0.2137 . 153 . 2784 . 'X-RAY DIFFRACTION' . 1.5959 1.6330 20 92.0000 2745 . 0.1627 0.1561 . 127 . 2872 . 'X-RAY DIFFRACTION' . 1.6330 1.6738 20 92.0000 2741 . 0.1566 0.1616 . 126 . 2867 . 'X-RAY DIFFRACTION' . 1.6738 1.7191 20 93.0000 2721 . 0.1555 0.1814 . 160 . 2881 . 'X-RAY DIFFRACTION' . 1.7191 1.7696 20 93.0000 2662 . 0.1548 0.1792 . 163 . 2825 . 'X-RAY DIFFRACTION' . 1.7696 1.8267 20 93.0000 2767 . 0.1473 0.1687 . 132 . 2899 . 'X-RAY DIFFRACTION' . 1.8267 1.8920 20 93.0000 2726 . 0.1579 0.1729 . 163 . 2889 . 'X-RAY DIFFRACTION' . 1.8920 1.9677 20 94.0000 2767 . 0.1550 0.1822 . 153 . 2920 . 'X-RAY DIFFRACTION' . 1.9677 2.0572 20 95.0000 2828 . 0.1520 0.1940 . 150 . 2978 . 'X-RAY DIFFRACTION' . 2.0572 2.1656 20 96.0000 2811 . 0.1576 0.1638 . 169 . 2980 . 'X-RAY DIFFRACTION' . 2.1656 2.3011 20 95.0000 2799 . 0.1578 0.2054 . 146 . 2945 . 'X-RAY DIFFRACTION' . 2.3011 2.4786 20 95.0000 2813 . 0.1636 0.2023 . 147 . 2960 . 'X-RAY DIFFRACTION' . 2.4786 2.7276 20 94.0000 2799 . 0.1714 0.1873 . 133 . 2932 . 'X-RAY DIFFRACTION' . 2.7276 3.1215 20 93.0000 2775 . 0.1650 0.2082 . 153 . 2928 . 'X-RAY DIFFRACTION' . 3.1215 3.9293 20 91.0000 2687 . 0.1459 0.1657 . 147 . 2834 . 'X-RAY DIFFRACTION' . 3.9293 22.5650 20 73.0000 2195 . 0.1779 0.1849 . 122 . 2317 . 'X-RAY DIFFRACTION' . # _struct.entry_id 3U98 _struct.title 'Human Thrombin In Complex With MI001' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3U98 _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text ;Serine Protease, Kringle, Hydrolase, Blood Coagulation, Blood Clotting, Convertion Of Fibrinogen To Fibrin, Cleavage On Pairs Of Basic Residues, Hirudin, Glycosylation, Blood, HYDROLASE-HYDROLASE INHIBITOR complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 8 ? J N N 8 ? K N N 8 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 15 ? SER A 19 ? PHE L 7 SER L 11 5 ? 5 HELX_P HELX_P2 2 THR A 24 B TYR A 32 J THR L 14 TYR L 14 1 ? 9 HELX_P HELX_P3 3 ALA B 41 ? CYS B 44 ? ALA H 55 CYS H 58 5 ? 4 HELX_P HELX_P4 4 PRO B 48 B ASP B 51 E PRO H 60 ASP H 60 5 ? 4 HELX_P HELX_P5 5 THR B 55 I ASN B 57 ? THR H 60 ASN H 62 5 ? 3 HELX_P HELX_P6 6 ASP B 122 ? LEU B 130 ? ASP H 125 LEU H 130 1 ? 9 HELX_P HELX_P7 7 GLU B 169 ? SER B 176 ? GLU H 164 SER H 171 1 ? 8 HELX_P HELX_P8 8 LYS B 191 ? GLY B 195 C LYS H 185 GLY H 186 5 ? 5 HELX_P HELX_P9 9 LEU B 246 ? GLY B 258 ? LEU H 234 GLY H 246 1 ? 13 HELX_P HELX_P10 10 PRO C 8 ? LEU C 12 ? PRO I 60 LEU I 64 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.055 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.044 ? ? covale1 covale one ? B ASN 53 ND2 ? G ? 1_555 D NAG . C1 ? G H ASN 60 H NAG 260 1_555 ? ? ? ? ? ? ? 1.428 ? N-Glycosylation covale2 covale both ? C GLU 10 C ? ? ? 1_555 C TYS 11 N ? ? I GLU 62 I TYS 63 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? C TYS 11 C ? ? ? 1_555 C LEU 12 N ? ? I TYS 63 I LEU 64 1_555 ? ? ? ? ? ? ? 1.329 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.58 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER B 5 ? ASP B 6 ? SER H 20 ASP H 21 A 2 GLN B 161 ? PRO B 166 ? GLN H 156 PRO H 161 A 3 LYS B 135 ? GLY B 140 ? LYS H 135 GLY H 140 A 4 PRO B 208 ? LYS B 212 ? PRO H 198 LYS H 202 A 5 TRP B 219 ? TRP B 227 ? TRP H 207 TRP H 215 A 6 GLY B 238 ? HIS B 242 ? GLY H 226 HIS H 230 A 7 MET B 185 ? ALA B 188 ? MET H 180 ALA H 183 B 1 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 B 2 GLU B 25 ? LEU B 32 ? GLU H 39 LEU H 46 B 3 TRP B 37 ? THR B 40 ? TRP H 51 THR H 54 B 4 ALA B 101 ? LEU B 105 ? ALA H 104 LEU H 108 B 5 LYS B 77 ? ILE B 86 ? LYS H 81 ILE H 90 B 6 LEU B 59 ? ILE B 63 ? LEU H 64 ILE H 68 B 7 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 C 1 LEU B 46 ? TYR B 47 A LEU H 60 TYR H 60 C 2 LYS B 52 F ASN B 53 G LYS H 60 ASN H 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER B 5 ? N SER H 20 O VAL B 162 ? O VAL H 157 A 2 3 O VAL B 163 ? O VAL H 158 N VAL B 138 ? N VAL H 138 A 3 4 N ARG B 137 ? N ARG H 137 O VAL B 210 ? O VAL H 200 A 4 5 N MET B 211 ? N MET H 201 O TYR B 220 ? O TYR H 208 A 5 6 N TRP B 227 ? N TRP H 215 O PHE B 239 ? O PHE H 227 A 6 7 O TYR B 240 ? O TYR H 228 N PHE B 186 ? N PHE H 181 B 1 2 N LEU B 18 ? N LEU H 33 O LEU B 27 ? O LEU H 41 B 2 3 N SER B 31 ? N SER H 45 O LEU B 39 ? O LEU H 53 B 3 4 N THR B 40 ? N THR H 54 O ALA B 101 ? O ALA H 104 B 4 5 O LYS B 104 ? O LYS H 107 N GLU B 82 ? N GLU H 86 B 5 6 O LYS B 77 ? O LYS H 81 N ILE B 63 ? N ILE H 68 B 6 7 O LEU B 60 ? O LEU H 65 N PHE B 19 ? N PHE H 34 C 1 2 N TYR B 47 A N TYR H 60 O LYS B 52 F O LYS H 60 # _database_PDB_matrix.entry_id 3U98 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3U98 _atom_sites.fract_transf_matrix[1][1] 0.014225 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002611 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013986 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014082 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 ? ? ? L H n A 1 2 PHE 2 1 ? ? ? L G n A 1 3 GLY 3 1 ? ? ? L F n A 1 4 SER 4 1 ? ? ? L E n A 1 5 GLY 5 1 ? ? ? L D n A 1 6 GLU 6 1 1 GLU GLU L C n A 1 7 ALA 7 1 1 ALA ALA L B n A 1 8 ASP 8 1 1 ASP ASP L A n A 1 9 CYS 9 1 1 CYS CYS L . n A 1 10 GLY 10 2 2 GLY GLY L . n A 1 11 LEU 11 3 3 LEU LEU L . n A 1 12 ARG 12 4 4 ARG ARG L . n A 1 13 PRO 13 5 5 PRO PRO L . n A 1 14 LEU 14 6 6 LEU LEU L . n A 1 15 PHE 15 7 7 PHE PHE L . n A 1 16 GLU 16 8 8 GLU GLU L . n A 1 17 LYS 17 9 9 LYS LYS L . n A 1 18 LYS 18 10 10 LYS LYS L . n A 1 19 SER 19 11 11 SER SER L . n A 1 20 LEU 20 12 12 LEU LEU L . n A 1 21 GLU 21 13 13 GLU GLU L . n A 1 22 ASP 22 14 14 ASP ASP L . n A 1 23 LYS 23 14 14 LYS LYS L A n A 1 24 THR 24 14 14 THR THR L B n A 1 25 GLU 25 14 14 GLU GLU L C n A 1 26 ARG 26 14 14 ARG ARG L D n A 1 27 GLU 27 14 14 GLU GLU L E n A 1 28 LEU 28 14 14 LEU LEU L F n A 1 29 LEU 29 14 14 LEU LEU L G n A 1 30 GLU 30 14 14 GLU GLU L H n A 1 31 SER 31 14 14 SER SER L I n A 1 32 TYR 32 14 14 TYR TYR L J n A 1 33 ILE 33 14 14 ILE ILE L K n A 1 34 ASP 34 14 ? ? ? L L n A 1 35 GLY 35 14 ? ? ? L M n A 1 36 ARG 36 15 ? ? ? L . n B 2 1 ILE 1 16 16 ILE ILE H . n B 2 2 VAL 2 17 17 VAL VAL H . n B 2 3 GLU 3 18 18 GLU GLU H . n B 2 4 GLY 4 19 19 GLY GLY H . n B 2 5 SER 5 20 20 SER SER H . n B 2 6 ASP 6 21 21 ASP ASP H . n B 2 7 ALA 7 22 22 ALA ALA H . n B 2 8 GLU 8 23 23 GLU GLU H . n B 2 9 ILE 9 24 24 ILE ILE H . n B 2 10 GLY 10 25 25 GLY GLY H . n B 2 11 MET 11 26 26 MET MET H . n B 2 12 SER 12 27 27 SER SER H . n B 2 13 PRO 13 28 28 PRO PRO H . n B 2 14 TRP 14 29 29 TRP TRP H . n B 2 15 GLN 15 30 30 GLN GLN H . n B 2 16 VAL 16 31 31 VAL VAL H . n B 2 17 MET 17 32 32 MET MET H . n B 2 18 LEU 18 33 33 LEU LEU H . n B 2 19 PHE 19 34 34 PHE PHE H . n B 2 20 ARG 20 35 35 ARG ARG H . n B 2 21 LYS 21 36 36 LYS LYS H . n B 2 22 SER 22 36 36 SER SER H A n B 2 23 PRO 23 37 37 PRO PRO H . n B 2 24 GLN 24 38 38 GLN GLN H . n B 2 25 GLU 25 39 39 GLU GLU H . n B 2 26 LEU 26 40 40 LEU LEU H . n B 2 27 LEU 27 41 41 LEU LEU H . n B 2 28 CYS 28 42 42 CYS CYS H . n B 2 29 GLY 29 43 43 GLY GLY H . n B 2 30 ALA 30 44 44 ALA ALA H . n B 2 31 SER 31 45 45 SER SER H . n B 2 32 LEU 32 46 46 LEU LEU H . n B 2 33 ILE 33 47 47 ILE ILE H . n B 2 34 SER 34 48 48 SER SER H . n B 2 35 ASP 35 49 49 ASP ASP H . n B 2 36 ARG 36 50 50 ARG ARG H . n B 2 37 TRP 37 51 51 TRP TRP H . n B 2 38 VAL 38 52 52 VAL VAL H . n B 2 39 LEU 39 53 53 LEU LEU H . n B 2 40 THR 40 54 54 THR THR H . n B 2 41 ALA 41 55 55 ALA ALA H . n B 2 42 ALA 42 56 56 ALA ALA H . n B 2 43 HIS 43 57 57 HIS HIS H . n B 2 44 CYS 44 58 58 CYS CYS H . n B 2 45 LEU 45 59 59 LEU LEU H . n B 2 46 LEU 46 60 60 LEU LEU H . n B 2 47 TYR 47 60 60 TYR TYR H A n B 2 48 PRO 48 60 60 PRO PRO H B n B 2 49 PRO 49 60 60 PRO PRO H C n B 2 50 TRP 50 60 60 TRP TRP H D n B 2 51 ASP 51 60 60 ASP ASP H E n B 2 52 LYS 52 60 60 LYS LYS H F n B 2 53 ASN 53 60 60 ASN NGX H G n B 2 54 PHE 54 60 60 PHE PHE H H n B 2 55 THR 55 60 60 THR THR H I n B 2 56 GLU 56 61 61 GLU GLU H . n B 2 57 ASN 57 62 62 ASN ASN H . n B 2 58 ASP 58 63 63 ASP ASP H . n B 2 59 LEU 59 64 64 LEU LEU H . n B 2 60 LEU 60 65 65 LEU LEU H . n B 2 61 VAL 61 66 66 VAL VAL H . n B 2 62 ARG 62 67 67 ARG ARG H . n B 2 63 ILE 63 68 68 ILE ILE H . n B 2 64 GLY 64 69 69 GLY GLY H . n B 2 65 LYS 65 70 70 LYS LYS H . n B 2 66 HIS 66 71 71 HIS HIS H . n B 2 67 SER 67 72 72 SER SER H . n B 2 68 ARG 68 73 73 ARG ARG H . n B 2 69 THR 69 74 74 THR THR H . n B 2 70 ARG 70 75 75 ARG ARG H . n B 2 71 TYR 71 76 76 TYR TYR H . n B 2 72 GLU 72 77 77 GLU GLU H . n B 2 73 ARG 73 77 77 ARG ARG H A n B 2 74 ASN 74 78 78 ASN ASN H . n B 2 75 ILE 75 79 79 ILE ILE H . n B 2 76 GLU 76 80 80 GLU GLU H . n B 2 77 LYS 77 81 81 LYS LYS H . n B 2 78 ILE 78 82 82 ILE ILE H . n B 2 79 SER 79 83 83 SER SER H . n B 2 80 MET 80 84 84 MET MET H . n B 2 81 LEU 81 85 85 LEU LEU H . n B 2 82 GLU 82 86 86 GLU GLU H . n B 2 83 LYS 83 87 87 LYS LYS H . n B 2 84 ILE 84 88 88 ILE ILE H . n B 2 85 TYR 85 89 89 TYR TYR H . n B 2 86 ILE 86 90 90 ILE ILE H . n B 2 87 HIS 87 91 91 HIS HIS H . n B 2 88 PRO 88 92 92 PRO PRO H . n B 2 89 ARG 89 93 93 ARG ARG H . n B 2 90 TYR 90 94 94 TYR TYR H . n B 2 91 ASN 91 95 95 ASN ASN H . n B 2 92 TRP 92 96 96 TRP TRP H . n B 2 93 ARG 93 97 97 ARG ARG H . n B 2 94 GLU 94 97 97 GLU GLU H A n B 2 95 ASN 95 98 98 ASN ASN H . n B 2 96 LEU 96 99 99 LEU LEU H . n B 2 97 ASP 97 100 100 ASP ASP H . n B 2 98 ARG 98 101 101 ARG ARG H . n B 2 99 ASP 99 102 102 ASP ASP H . n B 2 100 ILE 100 103 103 ILE ILE H . n B 2 101 ALA 101 104 104 ALA ALA H . n B 2 102 LEU 102 105 105 LEU LEU H . n B 2 103 MET 103 106 106 MET MET H . n B 2 104 LYS 104 107 107 LYS LYS H . n B 2 105 LEU 105 108 108 LEU LEU H . n B 2 106 LYS 106 109 109 LYS LYS H . n B 2 107 LYS 107 110 110 LYS LYS H . n B 2 108 PRO 108 111 111 PRO PRO H . n B 2 109 VAL 109 112 112 VAL VAL H . n B 2 110 ALA 110 113 113 ALA ALA H . n B 2 111 PHE 111 114 114 PHE PHE H . n B 2 112 SER 112 115 115 SER SER H . n B 2 113 ASP 113 116 116 ASP ASP H . n B 2 114 TYR 114 117 117 TYR TYR H . n B 2 115 ILE 115 118 118 ILE ILE H . n B 2 116 HIS 116 119 119 HIS HIS H . n B 2 117 PRO 117 120 120 PRO PRO H . n B 2 118 VAL 118 121 121 VAL VAL H . n B 2 119 CYS 119 122 122 CYS CYS H . n B 2 120 LEU 120 123 123 LEU LEU H . n B 2 121 PRO 121 124 124 PRO PRO H . n B 2 122 ASP 122 125 125 ASP ASP H . n B 2 123 ARG 123 126 126 ARG ARG H . n B 2 124 GLU 124 127 127 GLU GLU H . n B 2 125 THR 125 128 128 THR THR H . n B 2 126 ALA 126 129 129 ALA ALA H . n B 2 127 ALA 127 129 129 ALA ALA H A n B 2 128 SER 128 129 129 SER SER H B n B 2 129 LEU 129 129 129 LEU LEU H C n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 GLN 131 131 131 GLN GLN H . n B 2 132 ALA 132 132 132 ALA ALA H . n B 2 133 GLY 133 133 133 GLY GLY H . n B 2 134 TYR 134 134 134 TYR TYR H . n B 2 135 LYS 135 135 135 LYS LYS H . n B 2 136 GLY 136 136 136 GLY GLY H . n B 2 137 ARG 137 137 137 ARG ARG H . n B 2 138 VAL 138 138 138 VAL VAL H . n B 2 139 THR 139 139 139 THR THR H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 TRP 141 141 141 TRP TRP H . n B 2 142 GLY 142 142 142 GLY GLY H . n B 2 143 ASN 143 143 143 ASN ASN H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 LYS 145 145 145 LYS LYS H . n B 2 146 GLU 146 146 146 GLU GLU H . n B 2 147 THR 147 147 147 THR THR H . n B 2 148 TRP 148 148 ? ? ? H . n B 2 149 THR 149 149 ? ? ? H . n B 2 150 ALA 150 149 ? ? ? H A n B 2 151 ASN 151 149 ? ? ? H B n B 2 152 VAL 152 149 ? ? ? H C n B 2 153 GLY 153 149 ? ? ? H D n B 2 154 LYS 154 149 ? ? ? H E n B 2 155 GLY 155 150 150 GLY GLY H . n B 2 156 GLN 156 151 151 GLN GLN H . n B 2 157 PRO 157 152 152 PRO PRO H . n B 2 158 SER 158 153 153 SER SER H . n B 2 159 VAL 159 154 154 VAL VAL H . n B 2 160 LEU 160 155 155 LEU LEU H . n B 2 161 GLN 161 156 156 GLN GLN H . n B 2 162 VAL 162 157 157 VAL VAL H . n B 2 163 VAL 163 158 158 VAL VAL H . n B 2 164 ASN 164 159 159 ASN ASN H . n B 2 165 LEU 165 160 160 LEU LEU H . n B 2 166 PRO 166 161 161 PRO PRO H . n B 2 167 ILE 167 162 162 ILE ILE H . n B 2 168 VAL 168 163 163 VAL VAL H . n B 2 169 GLU 169 164 164 GLU GLU H . n B 2 170 ARG 170 165 165 ARG ARG H . n B 2 171 PRO 171 166 166 PRO PRO H . n B 2 172 VAL 172 167 167 VAL VAL H . n B 2 173 CYS 173 168 168 CYS CYS H . n B 2 174 LYS 174 169 169 LYS LYS H . n B 2 175 ASP 175 170 170 ASP ASP H . n B 2 176 SER 176 171 171 SER SER H . n B 2 177 THR 177 172 172 THR THR H . n B 2 178 ARG 178 173 173 ARG ARG H . n B 2 179 ILE 179 174 174 ILE ILE H . n B 2 180 ARG 180 175 175 ARG ARG H . n B 2 181 ILE 181 176 176 ILE ILE H . n B 2 182 THR 182 177 177 THR THR H . n B 2 183 ASP 183 178 178 ASP ASP H . n B 2 184 ASN 184 179 179 ASN ASN H . n B 2 185 MET 185 180 180 MET MET H . n B 2 186 PHE 186 181 181 PHE PHE H . n B 2 187 CYS 187 182 182 CYS CYS H . n B 2 188 ALA 188 183 183 ALA ALA H . n B 2 189 GLY 189 184 184 GLY GLY H . n B 2 190 TYR 190 184 184 TYR TYR H A n B 2 191 LYS 191 185 185 LYS LYS H . n B 2 192 PRO 192 186 186 PRO PRO H . n B 2 193 ASP 193 186 186 ASP ASP H A n B 2 194 GLU 194 186 186 GLU GLU H B n B 2 195 GLY 195 186 186 GLY GLY H C n B 2 196 LYS 196 186 186 LYS LYS H D n B 2 197 ARG 197 187 187 ARG ARG H . n B 2 198 GLY 198 188 188 GLY GLY H . n B 2 199 ASP 199 189 189 ASP ASP H . n B 2 200 ALA 200 190 190 ALA ALA H . n B 2 201 CYS 201 191 191 CYS CYS H . n B 2 202 GLU 202 192 192 GLU GLU H . n B 2 203 GLY 203 193 193 GLY GLY H . n B 2 204 ASP 204 194 194 ASP ASP H . n B 2 205 SER 205 195 195 SER SER H . n B 2 206 GLY 206 196 196 GLY GLY H . n B 2 207 GLY 207 197 197 GLY GLY H . n B 2 208 PRO 208 198 198 PRO PRO H . n B 2 209 PHE 209 199 199 PHE PHE H . n B 2 210 VAL 210 200 200 VAL VAL H . n B 2 211 MET 211 201 201 MET MET H . n B 2 212 LYS 212 202 202 LYS LYS H . n B 2 213 SER 213 203 203 SER SER H . n B 2 214 PRO 214 204 204 PRO PRO H . n B 2 215 PHE 215 204 204 PHE PHE H A n B 2 216 ASN 216 204 204 ASN ASN H B n B 2 217 ASN 217 205 205 ASN ASN H . n B 2 218 ARG 218 206 206 ARG ARG H . n B 2 219 TRP 219 207 207 TRP TRP H . n B 2 220 TYR 220 208 208 TYR TYR H . n B 2 221 GLN 221 209 209 GLN GLN H . n B 2 222 MET 222 210 210 MET MET H . n B 2 223 GLY 223 211 211 GLY GLY H . n B 2 224 ILE 224 212 212 ILE ILE H . n B 2 225 VAL 225 213 213 VAL VAL H . n B 2 226 SER 226 214 214 SER SER H . n B 2 227 TRP 227 215 215 TRP TRP H . n B 2 228 GLY 228 216 216 GLY GLY H . n B 2 229 GLU 229 217 217 GLU GLU H . n B 2 230 GLY 230 219 219 GLY GLY H . n B 2 231 CYS 231 220 220 CYS CYS H . n B 2 232 ASP 232 221 221 ASP ASP H . n B 2 233 ARG 233 221 221 ARG ARG H A n B 2 234 ASP 234 222 222 ASP ASP H . n B 2 235 GLY 235 223 223 GLY GLY H . n B 2 236 LYS 236 224 224 LYS LYS H . n B 2 237 TYR 237 225 225 TYR TYR H . n B 2 238 GLY 238 226 226 GLY GLY H . n B 2 239 PHE 239 227 227 PHE PHE H . n B 2 240 TYR 240 228 228 TYR TYR H . n B 2 241 THR 241 229 229 THR THR H . n B 2 242 HIS 242 230 230 HIS HIS H . n B 2 243 VAL 243 231 231 VAL VAL H . n B 2 244 PHE 244 232 232 PHE PHE H . n B 2 245 ARG 245 233 233 ARG ARG H . n B 2 246 LEU 246 234 234 LEU LEU H . n B 2 247 LYS 247 235 235 LYS LYS H . n B 2 248 LYS 248 236 236 LYS LYS H . n B 2 249 TRP 249 237 237 TRP TRP H . n B 2 250 ILE 250 238 238 ILE ILE H . n B 2 251 GLN 251 239 239 GLN GLN H . n B 2 252 LYS 252 240 240 LYS LYS H . n B 2 253 VAL 253 241 241 VAL VAL H . n B 2 254 ILE 254 242 242 ILE ILE H . n B 2 255 ASP 255 243 243 ASP ASP H . n B 2 256 GLN 256 244 244 GLN GLN H . n B 2 257 PHE 257 245 245 PHE PHE H . n B 2 258 GLY 258 246 246 GLY GLY H . n B 2 259 GLU 259 247 ? ? ? H . n C 3 1 ASN 1 53 ? ? ? I . n C 3 2 GLY 2 54 ? ? ? I . n C 3 3 ASP 3 55 55 ASP ASP I . n C 3 4 PHE 4 56 56 PHE PHE I . n C 3 5 GLU 5 57 57 GLU GLU I . n C 3 6 GLU 6 58 58 GLU GLU I . n C 3 7 ILE 7 59 59 ILE ILE I . n C 3 8 PRO 8 60 60 PRO PRO I . n C 3 9 GLU 9 61 61 GLU GLU I . n C 3 10 GLU 10 62 62 GLU GLU I . n C 3 11 TYS 11 63 63 TYS TYS I . n C 3 12 LEU 12 64 64 LEU LEU I . n C 3 13 GLN 13 65 65 GLN GLN I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG 1 260 60 NAG NGX H G E 5 BJA 1 1 1 BJA BJA H . F 6 PO4 1 2 2 PO4 PO4 H . G 7 NA 1 3 3 NA NA H . H 7 NA 1 4 4 NA NA H . I 8 HOH 1 1001 14 HOH HOH L . I 8 HOH 2 1002 20 HOH HOH L . I 8 HOH 3 1003 23 HOH HOH L . I 8 HOH 4 1004 25 HOH HOH L . I 8 HOH 5 1005 26 HOH HOH L . I 8 HOH 6 1006 45 HOH HOH L . I 8 HOH 7 1007 49 HOH HOH L . I 8 HOH 8 1008 64 HOH HOH L . I 8 HOH 9 1009 78 HOH HOH L . I 8 HOH 10 1010 84 HOH HOH L . I 8 HOH 11 1011 99 HOH HOH L . I 8 HOH 12 1012 124 HOH HOH L . I 8 HOH 13 1013 137 HOH HOH L . I 8 HOH 14 1014 138 HOH HOH L . I 8 HOH 15 1015 140 HOH HOH L . I 8 HOH 16 1016 151 HOH HOH L . I 8 HOH 17 1017 153 HOH HOH L . I 8 HOH 18 1018 154 HOH HOH L . I 8 HOH 19 1019 161 HOH HOH L . I 8 HOH 20 1020 165 HOH HOH L . I 8 HOH 21 1021 184 HOH HOH L . I 8 HOH 22 1022 190 HOH HOH L . I 8 HOH 23 1023 194 HOH HOH L . I 8 HOH 24 1024 205 HOH HOH L . I 8 HOH 25 1025 210 HOH HOH L . I 8 HOH 26 1026 228 HOH HOH L . I 8 HOH 27 1027 231 HOH HOH L . I 8 HOH 28 1028 233 HOH HOH L . I 8 HOH 29 1029 252 HOH HOH L . I 8 HOH 30 1030 268 HOH HOH L . I 8 HOH 31 1031 284 HOH HOH L . I 8 HOH 32 1032 285 HOH HOH L . I 8 HOH 33 1033 294 HOH HOH L . I 8 HOH 34 1034 295 HOH HOH L . I 8 HOH 35 1035 298 HOH HOH L . I 8 HOH 36 1036 303 HOH HOH L . I 8 HOH 37 1037 311 HOH HOH L . I 8 HOH 38 1038 312 HOH HOH L . I 8 HOH 39 1039 325 HOH HOH L . I 8 HOH 40 1040 337 HOH HOH L . I 8 HOH 41 1041 343 HOH HOH L . I 8 HOH 42 1042 344 HOH HOH L . J 8 HOH 1 1043 5 HOH HOH H . J 8 HOH 2 1044 6 HOH HOH H . J 8 HOH 3 1045 7 HOH HOH H . J 8 HOH 4 1046 8 HOH HOH H . J 8 HOH 5 1047 9 HOH HOH H . J 8 HOH 6 1048 10 HOH HOH H . J 8 HOH 7 1049 11 HOH HOH H . J 8 HOH 8 1050 12 HOH HOH H . J 8 HOH 9 1051 13 HOH HOH H . J 8 HOH 10 1052 15 HOH HOH H . J 8 HOH 11 1053 148 HOH HOH H . J 8 HOH 12 1054 149 HOH HOH H . J 8 HOH 13 1055 218 HOH HOH H . J 8 HOH 14 1056 248 HOH HOH H . J 8 HOH 15 1057 1 HOH HOH H . J 8 HOH 16 1058 250 HOH HOH H . J 8 HOH 17 1059 251 HOH HOH H . J 8 HOH 18 1060 2 HOH HOH H . J 8 HOH 19 1061 253 HOH HOH H . J 8 HOH 20 1062 254 HOH HOH H . J 8 HOH 21 1063 255 HOH HOH H . J 8 HOH 22 1064 256 HOH HOH H . J 8 HOH 23 1065 257 HOH HOH H . J 8 HOH 24 1066 258 HOH HOH H . J 8 HOH 25 1067 259 HOH HOH H . J 8 HOH 26 1068 260 HOH HOH H . J 8 HOH 27 1069 261 HOH HOH H . J 8 HOH 28 1070 262 HOH HOH H . J 8 HOH 29 1071 263 HOH HOH H . J 8 HOH 30 1072 264 HOH HOH H . J 8 HOH 31 1073 265 HOH HOH H . J 8 HOH 32 1074 266 HOH HOH H . J 8 HOH 33 1075 267 HOH HOH H . J 8 HOH 34 1076 3 HOH HOH H . J 8 HOH 35 1077 269 HOH HOH H . J 8 HOH 36 1078 270 HOH HOH H . J 8 HOH 37 1079 271 HOH HOH H . J 8 HOH 38 1080 272 HOH HOH H . J 8 HOH 39 1081 273 HOH HOH H . J 8 HOH 40 1082 274 HOH HOH H . J 8 HOH 41 1083 275 HOH HOH H . J 8 HOH 42 1084 276 HOH HOH H . J 8 HOH 43 1085 277 HOH HOH H . J 8 HOH 44 1086 278 HOH HOH H . J 8 HOH 45 1087 279 HOH HOH H . J 8 HOH 46 1088 280 HOH HOH H . J 8 HOH 47 1089 281 HOH HOH H . J 8 HOH 48 1090 282 HOH HOH H . J 8 HOH 49 1091 283 HOH HOH H . J 8 HOH 50 1092 4 HOH HOH H . J 8 HOH 51 1093 16 HOH HOH H . J 8 HOH 52 1094 286 HOH HOH H . J 8 HOH 53 1095 287 HOH HOH H . J 8 HOH 54 1096 288 HOH HOH H . J 8 HOH 55 1097 289 HOH HOH H . J 8 HOH 56 1098 290 HOH HOH H . J 8 HOH 57 1099 291 HOH HOH H . J 8 HOH 58 1100 292 HOH HOH H . J 8 HOH 59 1101 293 HOH HOH H . J 8 HOH 60 1102 17 HOH HOH H . J 8 HOH 61 1103 18 HOH HOH H . J 8 HOH 62 1104 19 HOH HOH H . J 8 HOH 63 1105 297 HOH HOH H . J 8 HOH 64 1106 21 HOH HOH H . J 8 HOH 65 1107 299 HOH HOH H . J 8 HOH 66 1108 300 HOH HOH H . J 8 HOH 67 1109 301 HOH HOH H . J 8 HOH 68 1110 302 HOH HOH H . J 8 HOH 69 1111 22 HOH HOH H . J 8 HOH 70 1112 304 HOH HOH H . J 8 HOH 71 1113 24 HOH HOH H . J 8 HOH 72 1114 306 HOH HOH H . J 8 HOH 73 1115 307 HOH HOH H . J 8 HOH 74 1116 308 HOH HOH H . J 8 HOH 75 1117 309 HOH HOH H . J 8 HOH 76 1118 310 HOH HOH H . J 8 HOH 77 1119 27 HOH HOH H . J 8 HOH 78 1120 28 HOH HOH H . J 8 HOH 79 1121 313 HOH HOH H . J 8 HOH 80 1122 314 HOH HOH H . J 8 HOH 81 1123 29 HOH HOH H . J 8 HOH 82 1124 316 HOH HOH H . J 8 HOH 83 1125 317 HOH HOH H . J 8 HOH 84 1126 318 HOH HOH H . J 8 HOH 85 1127 319 HOH HOH H . J 8 HOH 86 1128 320 HOH HOH H . J 8 HOH 87 1129 321 HOH HOH H . J 8 HOH 88 1130 322 HOH HOH H . J 8 HOH 89 1131 323 HOH HOH H . J 8 HOH 90 1132 324 HOH HOH H . J 8 HOH 91 1133 30 HOH HOH H . J 8 HOH 92 1134 326 HOH HOH H . J 8 HOH 93 1135 327 HOH HOH H . J 8 HOH 94 1136 328 HOH HOH H . J 8 HOH 95 1137 329 HOH HOH H . J 8 HOH 96 1138 330 HOH HOH H . J 8 HOH 97 1139 331 HOH HOH H . J 8 HOH 98 1140 332 HOH HOH H . J 8 HOH 99 1141 333 HOH HOH H . J 8 HOH 100 1142 334 HOH HOH H . J 8 HOH 101 1143 335 HOH HOH H . J 8 HOH 102 1144 336 HOH HOH H . J 8 HOH 103 1145 31 HOH HOH H . J 8 HOH 104 1146 338 HOH HOH H . J 8 HOH 105 1147 339 HOH HOH H . J 8 HOH 106 1148 340 HOH HOH H . J 8 HOH 107 1149 341 HOH HOH H . J 8 HOH 108 1150 342 HOH HOH H . J 8 HOH 109 1151 32 HOH HOH H . J 8 HOH 110 1152 33 HOH HOH H . J 8 HOH 111 1153 345 HOH HOH H . J 8 HOH 112 1154 346 HOH HOH H . J 8 HOH 113 1155 347 HOH HOH H . J 8 HOH 114 1156 34 HOH HOH H . J 8 HOH 115 1157 35 HOH HOH H . J 8 HOH 116 1158 36 HOH HOH H . J 8 HOH 117 1159 37 HOH HOH H . J 8 HOH 118 1160 38 HOH HOH H . J 8 HOH 119 1161 39 HOH HOH H . J 8 HOH 120 1162 40 HOH HOH H . J 8 HOH 121 1163 41 HOH HOH H . J 8 HOH 122 1164 42 HOH HOH H . J 8 HOH 123 1165 43 HOH HOH H . J 8 HOH 124 1166 44 HOH HOH H . J 8 HOH 125 1167 46 HOH HOH H . J 8 HOH 126 1168 47 HOH HOH H . J 8 HOH 127 1169 48 HOH HOH H . J 8 HOH 128 1170 50 HOH HOH H . J 8 HOH 129 1171 51 HOH HOH H . J 8 HOH 130 1172 52 HOH HOH H . J 8 HOH 131 1173 53 HOH HOH H . J 8 HOH 132 1174 54 HOH HOH H . J 8 HOH 133 1175 55 HOH HOH H . J 8 HOH 134 1176 56 HOH HOH H . J 8 HOH 135 1177 57 HOH HOH H . J 8 HOH 136 1178 58 HOH HOH H . J 8 HOH 137 1179 59 HOH HOH H . J 8 HOH 138 1180 60 HOH HOH H . J 8 HOH 139 1181 61 HOH HOH H . J 8 HOH 140 1182 62 HOH HOH H . J 8 HOH 141 1183 63 HOH HOH H . J 8 HOH 142 1184 65 HOH HOH H . J 8 HOH 143 1185 66 HOH HOH H . J 8 HOH 144 1186 67 HOH HOH H . J 8 HOH 145 1187 68 HOH HOH H . J 8 HOH 146 1188 69 HOH HOH H . J 8 HOH 147 1189 70 HOH HOH H . J 8 HOH 148 1190 71 HOH HOH H . J 8 HOH 149 1191 72 HOH HOH H . J 8 HOH 150 1192 73 HOH HOH H . J 8 HOH 151 1193 74 HOH HOH H . J 8 HOH 152 1194 75 HOH HOH H . J 8 HOH 153 1195 76 HOH HOH H . J 8 HOH 154 1196 77 HOH HOH H . J 8 HOH 155 1197 79 HOH HOH H . J 8 HOH 156 1198 80 HOH HOH H . J 8 HOH 157 1199 81 HOH HOH H . J 8 HOH 158 1200 82 HOH HOH H . J 8 HOH 159 1201 83 HOH HOH H . J 8 HOH 160 1202 85 HOH HOH H . J 8 HOH 161 1203 86 HOH HOH H . J 8 HOH 162 1204 87 HOH HOH H . J 8 HOH 163 1205 88 HOH HOH H . J 8 HOH 164 1206 89 HOH HOH H . J 8 HOH 165 1207 90 HOH HOH H . J 8 HOH 166 1208 91 HOH HOH H . J 8 HOH 167 1209 92 HOH HOH H . J 8 HOH 168 1210 93 HOH HOH H . J 8 HOH 169 1211 94 HOH HOH H . J 8 HOH 170 1212 95 HOH HOH H . J 8 HOH 171 1213 96 HOH HOH H . J 8 HOH 172 1214 97 HOH HOH H . J 8 HOH 173 1215 98 HOH HOH H . J 8 HOH 174 1216 100 HOH HOH H . J 8 HOH 175 1217 101 HOH HOH H . J 8 HOH 176 1218 102 HOH HOH H . J 8 HOH 177 1219 103 HOH HOH H . J 8 HOH 178 1220 104 HOH HOH H . J 8 HOH 179 1221 105 HOH HOH H . J 8 HOH 180 1222 106 HOH HOH H . J 8 HOH 181 1223 107 HOH HOH H . J 8 HOH 182 1224 108 HOH HOH H . J 8 HOH 183 1225 109 HOH HOH H . J 8 HOH 184 1226 110 HOH HOH H . J 8 HOH 185 1227 111 HOH HOH H . J 8 HOH 186 1228 112 HOH HOH H . J 8 HOH 187 1229 114 HOH HOH H . J 8 HOH 188 1230 115 HOH HOH H . J 8 HOH 189 1231 116 HOH HOH H . J 8 HOH 190 1232 117 HOH HOH H . J 8 HOH 191 1233 118 HOH HOH H . J 8 HOH 192 1234 119 HOH HOH H . J 8 HOH 193 1235 120 HOH HOH H . J 8 HOH 194 1236 121 HOH HOH H . J 8 HOH 195 1237 122 HOH HOH H . J 8 HOH 196 1238 123 HOH HOH H . J 8 HOH 197 1239 125 HOH HOH H . J 8 HOH 198 1240 126 HOH HOH H . J 8 HOH 199 1241 127 HOH HOH H . J 8 HOH 200 1242 128 HOH HOH H . J 8 HOH 201 1243 129 HOH HOH H . J 8 HOH 202 1244 130 HOH HOH H . J 8 HOH 203 1245 131 HOH HOH H . J 8 HOH 204 1246 132 HOH HOH H . J 8 HOH 205 1247 133 HOH HOH H . J 8 HOH 206 1248 134 HOH HOH H . J 8 HOH 207 1249 135 HOH HOH H . J 8 HOH 208 1250 136 HOH HOH H . J 8 HOH 209 1251 139 HOH HOH H . J 8 HOH 210 1252 141 HOH HOH H . J 8 HOH 211 1253 142 HOH HOH H . J 8 HOH 212 1254 143 HOH HOH H . J 8 HOH 213 1255 144 HOH HOH H . J 8 HOH 214 1256 145 HOH HOH H . J 8 HOH 215 1257 146 HOH HOH H . J 8 HOH 216 1258 147 HOH HOH H . J 8 HOH 217 1259 150 HOH HOH H . J 8 HOH 218 1260 152 HOH HOH H . J 8 HOH 219 1261 155 HOH HOH H . J 8 HOH 220 1262 156 HOH HOH H . J 8 HOH 221 1263 157 HOH HOH H . J 8 HOH 222 1264 158 HOH HOH H . J 8 HOH 223 1265 159 HOH HOH H . J 8 HOH 224 1266 160 HOH HOH H . J 8 HOH 225 1267 162 HOH HOH H . J 8 HOH 226 1268 164 HOH HOH H . J 8 HOH 227 1269 166 HOH HOH H . J 8 HOH 228 1270 167 HOH HOH H . J 8 HOH 229 1271 168 HOH HOH H . J 8 HOH 230 1272 169 HOH HOH H . J 8 HOH 231 1273 170 HOH HOH H . J 8 HOH 232 1274 171 HOH HOH H . J 8 HOH 233 1275 172 HOH HOH H . J 8 HOH 234 1276 173 HOH HOH H . J 8 HOH 235 1277 174 HOH HOH H . J 8 HOH 236 1278 175 HOH HOH H . J 8 HOH 237 1279 176 HOH HOH H . J 8 HOH 238 1280 177 HOH HOH H . J 8 HOH 239 1281 178 HOH HOH H . J 8 HOH 240 1282 179 HOH HOH H . J 8 HOH 241 1283 180 HOH HOH H . J 8 HOH 242 1284 181 HOH HOH H . J 8 HOH 243 1285 182 HOH HOH H . J 8 HOH 244 1286 183 HOH HOH H . J 8 HOH 245 1287 185 HOH HOH H . J 8 HOH 246 1288 186 HOH HOH H . J 8 HOH 247 1289 187 HOH HOH H . J 8 HOH 248 1290 188 HOH HOH H . J 8 HOH 249 1291 189 HOH HOH H . J 8 HOH 250 1292 191 HOH HOH H . J 8 HOH 251 1293 192 HOH HOH H . J 8 HOH 252 1294 193 HOH HOH H . J 8 HOH 253 1295 195 HOH HOH H . J 8 HOH 254 1296 196 HOH HOH H . J 8 HOH 255 1297 197 HOH HOH H . J 8 HOH 256 1298 198 HOH HOH H . J 8 HOH 257 1299 199 HOH HOH H . J 8 HOH 258 1300 200 HOH HOH H . J 8 HOH 259 1301 201 HOH HOH H . J 8 HOH 260 1302 202 HOH HOH H . J 8 HOH 261 1303 203 HOH HOH H . J 8 HOH 262 1304 204 HOH HOH H . J 8 HOH 263 1305 206 HOH HOH H . J 8 HOH 264 1306 207 HOH HOH H . J 8 HOH 265 1307 208 HOH HOH H . J 8 HOH 266 1308 209 HOH HOH H . J 8 HOH 267 1309 211 HOH HOH H . J 8 HOH 268 1310 212 HOH HOH H . J 8 HOH 269 1311 213 HOH HOH H . J 8 HOH 270 1312 214 HOH HOH H . J 8 HOH 271 1313 216 HOH HOH H . J 8 HOH 272 1314 217 HOH HOH H . J 8 HOH 273 1315 219 HOH HOH H . J 8 HOH 274 1316 220 HOH HOH H . J 8 HOH 275 1317 221 HOH HOH H . J 8 HOH 276 1318 222 HOH HOH H . J 8 HOH 277 1319 223 HOH HOH H . J 8 HOH 278 1320 224 HOH HOH H . J 8 HOH 279 1321 225 HOH HOH H . J 8 HOH 280 1322 226 HOH HOH H . J 8 HOH 281 1323 227 HOH HOH H . J 8 HOH 282 1324 229 HOH HOH H . J 8 HOH 283 1325 230 HOH HOH H . J 8 HOH 284 1326 232 HOH HOH H . J 8 HOH 285 1327 234 HOH HOH H . J 8 HOH 286 1328 235 HOH HOH H . J 8 HOH 287 1329 236 HOH HOH H . J 8 HOH 288 1330 237 HOH HOH H . J 8 HOH 289 1331 238 HOH HOH H . J 8 HOH 290 1332 239 HOH HOH H . J 8 HOH 291 1333 240 HOH HOH H . J 8 HOH 292 1334 241 HOH HOH H . J 8 HOH 293 1335 242 HOH HOH H . J 8 HOH 294 1336 243 HOH HOH H . J 8 HOH 295 1337 244 HOH HOH H . J 8 HOH 296 1338 245 HOH HOH H . J 8 HOH 297 1339 246 HOH HOH H . J 8 HOH 298 1340 247 HOH HOH H . K 8 HOH 1 1341 113 HOH HOH I . K 8 HOH 2 1342 163 HOH HOH I . K 8 HOH 3 1343 215 HOH HOH I . K 8 HOH 4 1344 249 HOH HOH I . # _pdbx_molecule_features.prd_id PRD_000877 _pdbx_molecule_features.name '(2S)-1-[(2R)-2-(BENZYLSULFONYLAMINO)-5-GUANIDINO-PENTANOYL]-N-[(4-CARBAMIMIDOYLPHENYL)METHYL]PYRROLIDINE-2-CARBOXAMIDE' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class 'Thrombin inhibitor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000877 _pdbx_molecule.asym_id E # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B ASN 53 H ASN 60 G ASN 'GLYCOSYLATION SITE' 2 C TYS 11 I TYS 63 ? TYR O-SULFO-L-TYROSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4090 ? 1 MORE -35 ? 1 'SSA (A^2)' 12560 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id H _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 1078 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id J _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-10-24 2 'Structure model' 1 1 2012-12-12 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2023-11-01 5 'Structure model' 1 4 2023-12-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Structure summary' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Refinement description' 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' entity 3 3 'Structure model' pdbx_chem_comp_identifier 4 3 'Structure model' pdbx_entity_nonpoly 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site 7 3 'Structure model' struct_site_gen 8 4 'Structure model' chem_comp 9 4 'Structure model' chem_comp_atom 10 4 'Structure model' chem_comp_bond 11 4 'Structure model' database_2 12 4 'Structure model' pdbx_initial_refinement_model 13 5 'Structure model' chem_comp_atom 14 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_chem_comp.type' 3 3 'Structure model' '_entity.pdbx_description' 4 3 'Structure model' '_pdbx_entity_nonpoly.name' 5 3 'Structure model' '_struct_conn.pdbx_dist_value' 6 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 3 'Structure model' '_struct_conn.pdbx_ptnr1_PDB_ins_code' 8 3 'Structure model' '_struct_conn.pdbx_ptnr2_PDB_ins_code' 9 3 'Structure model' '_struct_conn.pdbx_role' 10 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 11 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 12 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 13 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 14 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 15 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 16 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 17 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 18 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 19 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 20 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 21 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 23 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 24 4 'Structure model' '_chem_comp.pdbx_synonyms' 25 4 'Structure model' '_database_2.pdbx_DOI' 26 4 'Structure model' '_database_2.pdbx_database_accession' 27 5 'Structure model' '_chem_comp_atom.atom_id' 28 5 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 7.1013 -1.5850 12.6081 0.1220 0.1387 0.1143 0.0500 -0.0301 -0.0378 0.1946 0.3348 0.1355 -0.1508 0.0830 0.1011 0.2244 -0.1741 0.0208 0.2133 -0.2072 0.1761 -0.1988 0.1073 -0.0462 'X-RAY DIFFRACTION' 2 ? refined 15.7110 1.4956 10.3865 0.1893 0.1769 0.1102 0.0739 -0.0024 -0.0059 0.6451 0.1993 0.2323 -0.1668 0.0363 0.1735 0.2294 -0.1537 -0.0233 0.4292 -0.0076 -0.0702 -0.3593 0.2251 0.1410 'X-RAY DIFFRACTION' 3 ? refined 18.6439 -0.3986 11.6836 0.1095 0.1758 0.0882 0.0702 0.0117 0.0058 0.5208 0.6375 0.6283 0.0155 0.0001 0.1926 0.1524 -0.1231 0.0010 0.2451 -0.0008 -0.1136 -0.1401 0.0492 0.1260 'X-RAY DIFFRACTION' 4 ? refined 11.8129 6.8786 33.9204 0.1638 0.1538 0.1099 0.0415 -0.0262 -0.0378 0.6641 0.5567 0.1771 0.1993 0.2259 0.2151 -0.1157 0.1209 0.0160 -0.3128 0.1821 0.0304 0.2764 0.0572 0.0886 'X-RAY DIFFRACTION' 5 ? refined 8.9620 -8.2916 26.7366 0.1258 0.0853 0.1240 0.0072 -0.0051 -0.0011 0.5922 0.7313 0.3780 -0.5921 0.1430 -0.4133 0.0169 0.0321 -0.0364 -0.0187 -0.2138 0.1181 0.0761 0.0953 -0.0131 'X-RAY DIFFRACTION' 6 ? refined 15.3525 1.7054 26.0157 0.0770 0.0651 0.0840 0.0105 0.0096 -0.0056 0.8055 0.7054 0.6895 -0.7192 0.1112 -0.0008 0.0329 0.0010 -0.0153 -0.0608 0.0239 -0.0346 0.0390 0.0121 0.0445 'X-RAY DIFFRACTION' 7 ? refined 11.9095 -1.6947 -3.0115 0.4259 0.5604 -0.0021 0.2486 0.0988 -0.1165 0.0024 0.0440 0.0086 -0.0061 -0.0033 0.0124 0.0858 0.0073 0.1398 0.1927 -0.0080 -0.0082 -0.1648 -0.0460 -0.0594 'X-RAY DIFFRACTION' 8 ? refined 9.7853 16.9004 19.7339 0.1687 0.1288 0.1884 -0.0041 -0.0337 0.0108 0.6953 0.1222 0.3254 -0.1289 0.1985 -0.1969 -0.0116 0.0184 0.0183 0.0220 0.1768 -0.1362 0.0715 -0.1897 0.1416 'X-RAY DIFFRACTION' 9 ? refined -0.9738 14.6161 17.5896 0.0623 0.0646 0.1009 0.1543 0.0449 -0.0327 0.1444 0.0420 0.0733 -0.0210 0.0475 -0.0207 -0.0271 -0.1054 -0.1243 -0.0563 0.0458 0.0264 -0.1006 -0.0707 -0.0605 'X-RAY DIFFRACTION' 10 ? refined -2.2270 5.9180 29.9045 0.1241 0.1591 0.1484 0.0338 0.0330 0.0064 0.3753 0.7870 1.0741 -0.0794 -0.5977 -0.0206 0.0242 0.0927 -0.0159 -0.1693 -0.0720 0.2982 0.1121 0.0337 -0.3138 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 H 16 H 37 '(chain H and resid 16:37)' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 H 38 H 50 '(chain H and resid 38:50)' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 H 51 H 122 '(chain H and resid 51:122)' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 H 123 H 136 '(chain H and resid 123:136)' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 H 137 H 199 '(chain H and resid 137:199)' ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 H 200 H 246 '(chain H and resid 200:246)' ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 I 55 I 65 '(chain I and resid 55:65)' ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 L 1 L 1 '(chain L and resid 1C:3)' ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 L 4 L 12 '(chain L and resid 4:12)' ? ? ? ? ? 'X-RAY DIFFRACTION' 10 10 L 13 L 14 '(chain L and resid 13:14K)' ? ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7_650)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE L 7 ? ? -128.07 -88.17 2 1 TYR H 60 A ? -153.19 82.23 3 1 ASN H 60 G ? -157.16 83.29 4 1 HIS H 71 ? ? -128.67 -60.52 5 1 ILE H 79 ? ? -126.68 -61.10 6 1 ASN H 95 ? ? -100.53 79.68 7 1 ASN H 98 ? ? -142.00 10.80 8 1 SER H 195 ? ? -35.56 131.54 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 L GLU 1 C CG ? A GLU 6 CG 2 1 Y 1 L GLU 1 C CD ? A GLU 6 CD 3 1 Y 1 L GLU 1 C OE1 ? A GLU 6 OE1 4 1 Y 1 L GLU 1 C OE2 ? A GLU 6 OE2 5 1 Y 1 L LYS 14 A CG ? A LYS 23 CG 6 1 Y 1 L LYS 14 A CD ? A LYS 23 CD 7 1 Y 1 L LYS 14 A CE ? A LYS 23 CE 8 1 Y 1 L LYS 14 A NZ ? A LYS 23 NZ 9 1 Y 1 H SER 36 A OG ? B SER 22 OG 10 1 Y 1 H LYS 110 ? CG ? B LYS 107 CG 11 1 Y 1 H LYS 110 ? CD ? B LYS 107 CD 12 1 Y 1 H LYS 110 ? CE ? B LYS 107 CE 13 1 Y 1 H LYS 110 ? NZ ? B LYS 107 NZ 14 1 Y 1 H ASP 186 A CG ? B ASP 193 CG 15 1 Y 1 H ASP 186 A OD1 ? B ASP 193 OD1 16 1 Y 1 H ASP 186 A OD2 ? B ASP 193 OD2 17 1 Y 1 H GLN 239 ? CG ? B GLN 251 CG 18 1 Y 1 H GLN 239 ? CD ? B GLN 251 CD 19 1 Y 1 H GLN 239 ? OE1 ? B GLN 251 OE1 20 1 Y 1 H GLN 239 ? NE2 ? B GLN 251 NE2 21 1 Y 1 H LYS 240 ? CG ? B LYS 252 CG 22 1 Y 1 H LYS 240 ? CD ? B LYS 252 CD 23 1 Y 1 H LYS 240 ? CE ? B LYS 252 CE 24 1 Y 1 H LYS 240 ? NZ ? B LYS 252 NZ 25 1 Y 1 I GLU 58 ? CG ? C GLU 6 CG 26 1 Y 1 I GLU 58 ? CD ? C GLU 6 CD 27 1 Y 1 I GLU 58 ? OE1 ? C GLU 6 OE1 28 1 Y 1 I GLU 58 ? OE2 ? C GLU 6 OE2 29 1 Y 1 I GLU 61 ? CG ? C GLU 9 CG 30 1 Y 1 I GLU 61 ? CD ? C GLU 9 CD 31 1 Y 1 I GLU 61 ? OE1 ? C GLU 9 OE1 32 1 Y 1 I GLU 61 ? OE2 ? C GLU 9 OE2 33 1 Y 1 I GLN 65 ? CG ? C GLN 13 CG 34 1 Y 1 I GLN 65 ? CD ? C GLN 13 CD 35 1 Y 1 I GLN 65 ? OE1 ? C GLN 13 OE1 36 1 Y 1 I GLN 65 ? NE2 ? C GLN 13 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L THR 1 H A THR 1 2 1 Y 1 L PHE 1 G A PHE 2 3 1 Y 1 L GLY 1 F A GLY 3 4 1 Y 1 L SER 1 E A SER 4 5 1 Y 1 L GLY 1 D A GLY 5 6 1 Y 1 L ASP 14 L A ASP 34 7 1 Y 1 L GLY 14 M A GLY 35 8 1 Y 1 L ARG 15 ? A ARG 36 9 1 Y 1 H TRP 148 ? B TRP 148 10 1 Y 1 H THR 149 ? B THR 149 11 1 Y 1 H ALA 149 A B ALA 150 12 1 Y 1 H ASN 149 B B ASN 151 13 1 Y 1 H VAL 149 C B VAL 152 14 1 Y 1 H GLY 149 D B GLY 153 15 1 Y 1 H LYS 149 E B LYS 154 16 1 Y 1 H GLU 247 ? B GLU 259 17 1 Y 1 I ASN 53 ? C ASN 1 18 1 Y 1 I GLY 54 ? C GLY 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BJA C7 C N N 74 BJA S8 S N N 75 BJA C4 C Y N 76 BJA C5 C Y N 77 BJA C6 C Y N 78 BJA C1 C Y N 79 BJA C2 C Y N 80 BJA C3 C Y N 81 BJA O28 O N N 82 BJA O29 O N N 83 BJA N9 N N N 84 BJA C10 C N R 85 BJA C30 C N N 86 BJA C31 C N N 87 BJA C32 C N N 88 BJA N33 N N N 89 BJA C34 C N N 90 BJA N36 N N N 91 BJA N35 N N N 92 BJA C11 C N N 93 BJA O27 O N N 94 BJA N12 N N N 95 BJA C13 C N S 96 BJA C17 C N N 97 BJA O26 O N N 98 BJA C14 C N N 99 BJA C15 C N N 100 BJA C16 C N N 101 BJA N18 N N N 102 BJA C19 C N N 103 BJA C20 C Y N 104 BJA C25 C Y N 105 BJA C24 C Y N 106 BJA C23 C Y N 107 BJA C37 C N N 108 BJA N38 N N N 109 BJA N39 N N N 110 BJA C22 C Y N 111 BJA C21 C Y N 112 BJA H7 H N N 113 BJA H7A H N N 114 BJA H5 H N N 115 BJA H6 H N N 116 BJA H1 H N N 117 BJA H2 H N N 118 BJA H3 H N N 119 BJA HN9 H N N 120 BJA H10 H N N 121 BJA H30 H N N 122 BJA H30A H N N 123 BJA H31 H N N 124 BJA H31A H N N 125 BJA H32 H N N 126 BJA H32A H N N 127 BJA HN33 H N N 128 BJA HN36 H N N 129 BJA HN3A H N N 130 BJA HN35 H N N 131 BJA H13 H N N 132 BJA H14 H N N 133 BJA H14A H N N 134 BJA H15 H N N 135 BJA H15A H N N 136 BJA H16 H N N 137 BJA H16A H N N 138 BJA HN18 H N N 139 BJA H19 H N N 140 BJA H19A H N N 141 BJA H25 H N N 142 BJA H24 H N N 143 BJA HN38 H N N 144 BJA HN39 H N N 145 BJA HN3B H N N 146 BJA H22 H N N 147 BJA H21 H N N 148 CYS N N N N 149 CYS CA C N R 150 CYS C C N N 151 CYS O O N N 152 CYS CB C N N 153 CYS SG S N N 154 CYS OXT O N N 155 CYS H H N N 156 CYS H2 H N N 157 CYS HA H N N 158 CYS HB2 H N N 159 CYS HB3 H N N 160 CYS HG H N N 161 CYS HXT H N N 162 GLN N N N N 163 GLN CA C N S 164 GLN C C N N 165 GLN O O N N 166 GLN CB C N N 167 GLN CG C N N 168 GLN CD C N N 169 GLN OE1 O N N 170 GLN NE2 N N N 171 GLN OXT O N N 172 GLN H H N N 173 GLN H2 H N N 174 GLN HA H N N 175 GLN HB2 H N N 176 GLN HB3 H N N 177 GLN HG2 H N N 178 GLN HG3 H N N 179 GLN HE21 H N N 180 GLN HE22 H N N 181 GLN HXT H N N 182 GLU N N N N 183 GLU CA C N S 184 GLU C C N N 185 GLU O O N N 186 GLU CB C N N 187 GLU CG C N N 188 GLU CD C N N 189 GLU OE1 O N N 190 GLU OE2 O N N 191 GLU OXT O N N 192 GLU H H N N 193 GLU H2 H N N 194 GLU HA H N N 195 GLU HB2 H N N 196 GLU HB3 H N N 197 GLU HG2 H N N 198 GLU HG3 H N N 199 GLU HE2 H N N 200 GLU HXT H N N 201 GLY N N N N 202 GLY CA C N N 203 GLY C C N N 204 GLY O O N N 205 GLY OXT O N N 206 GLY H H N N 207 GLY H2 H N N 208 GLY HA2 H N N 209 GLY HA3 H N N 210 GLY HXT H N N 211 HIS N N N N 212 HIS CA C N S 213 HIS C C N N 214 HIS O O N N 215 HIS CB C N N 216 HIS CG C Y N 217 HIS ND1 N Y N 218 HIS CD2 C Y N 219 HIS CE1 C Y N 220 HIS NE2 N Y N 221 HIS OXT O N N 222 HIS H H N N 223 HIS H2 H N N 224 HIS HA H N N 225 HIS HB2 H N N 226 HIS HB3 H N N 227 HIS HD1 H N N 228 HIS HD2 H N N 229 HIS HE1 H N N 230 HIS HE2 H N N 231 HIS HXT H N N 232 HOH O O N N 233 HOH H1 H N N 234 HOH H2 H N N 235 ILE N N N N 236 ILE CA C N S 237 ILE C C N N 238 ILE O O N N 239 ILE CB C N S 240 ILE CG1 C N N 241 ILE CG2 C N N 242 ILE CD1 C N N 243 ILE OXT O N N 244 ILE H H N N 245 ILE H2 H N N 246 ILE HA H N N 247 ILE HB H N N 248 ILE HG12 H N N 249 ILE HG13 H N N 250 ILE HG21 H N N 251 ILE HG22 H N N 252 ILE HG23 H N N 253 ILE HD11 H N N 254 ILE HD12 H N N 255 ILE HD13 H N N 256 ILE HXT H N N 257 LEU N N N N 258 LEU CA C N S 259 LEU C C N N 260 LEU O O N N 261 LEU CB C N N 262 LEU CG C N N 263 LEU CD1 C N N 264 LEU CD2 C N N 265 LEU OXT O N N 266 LEU H H N N 267 LEU H2 H N N 268 LEU HA H N N 269 LEU HB2 H N N 270 LEU HB3 H N N 271 LEU HG H N N 272 LEU HD11 H N N 273 LEU HD12 H N N 274 LEU HD13 H N N 275 LEU HD21 H N N 276 LEU HD22 H N N 277 LEU HD23 H N N 278 LEU HXT H N N 279 LYS N N N N 280 LYS CA C N S 281 LYS C C N N 282 LYS O O N N 283 LYS CB C N N 284 LYS CG C N N 285 LYS CD C N N 286 LYS CE C N N 287 LYS NZ N N N 288 LYS OXT O N N 289 LYS H H N N 290 LYS H2 H N N 291 LYS HA H N N 292 LYS HB2 H N N 293 LYS HB3 H N N 294 LYS HG2 H N N 295 LYS HG3 H N N 296 LYS HD2 H N N 297 LYS HD3 H N N 298 LYS HE2 H N N 299 LYS HE3 H N N 300 LYS HZ1 H N N 301 LYS HZ2 H N N 302 LYS HZ3 H N N 303 LYS HXT H N N 304 MET N N N N 305 MET CA C N S 306 MET C C N N 307 MET O O N N 308 MET CB C N N 309 MET CG C N N 310 MET SD S N N 311 MET CE C N N 312 MET OXT O N N 313 MET H H N N 314 MET H2 H N N 315 MET HA H N N 316 MET HB2 H N N 317 MET HB3 H N N 318 MET HG2 H N N 319 MET HG3 H N N 320 MET HE1 H N N 321 MET HE2 H N N 322 MET HE3 H N N 323 MET HXT H N N 324 NA NA NA N N 325 NAG C1 C N R 326 NAG C2 C N R 327 NAG C3 C N R 328 NAG C4 C N S 329 NAG C5 C N R 330 NAG C6 C N N 331 NAG C7 C N N 332 NAG C8 C N N 333 NAG N2 N N N 334 NAG O1 O N N 335 NAG O3 O N N 336 NAG O4 O N N 337 NAG O5 O N N 338 NAG O6 O N N 339 NAG O7 O N N 340 NAG H1 H N N 341 NAG H2 H N N 342 NAG H3 H N N 343 NAG H4 H N N 344 NAG H5 H N N 345 NAG H61 H N N 346 NAG H62 H N N 347 NAG H81 H N N 348 NAG H82 H N N 349 NAG H83 H N N 350 NAG HN2 H N N 351 NAG HO1 H N N 352 NAG HO3 H N N 353 NAG HO4 H N N 354 NAG HO6 H N N 355 PHE N N N N 356 PHE CA C N S 357 PHE C C N N 358 PHE O O N N 359 PHE CB C N N 360 PHE CG C Y N 361 PHE CD1 C Y N 362 PHE CD2 C Y N 363 PHE CE1 C Y N 364 PHE CE2 C Y N 365 PHE CZ C Y N 366 PHE OXT O N N 367 PHE H H N N 368 PHE H2 H N N 369 PHE HA H N N 370 PHE HB2 H N N 371 PHE HB3 H N N 372 PHE HD1 H N N 373 PHE HD2 H N N 374 PHE HE1 H N N 375 PHE HE2 H N N 376 PHE HZ H N N 377 PHE HXT H N N 378 PO4 P P N N 379 PO4 O1 O N N 380 PO4 O2 O N N 381 PO4 O3 O N N 382 PO4 O4 O N N 383 PRO N N N N 384 PRO CA C N S 385 PRO C C N N 386 PRO O O N N 387 PRO CB C N N 388 PRO CG C N N 389 PRO CD C N N 390 PRO OXT O N N 391 PRO H H N N 392 PRO HA H N N 393 PRO HB2 H N N 394 PRO HB3 H N N 395 PRO HG2 H N N 396 PRO HG3 H N N 397 PRO HD2 H N N 398 PRO HD3 H N N 399 PRO HXT H N N 400 SER N N N N 401 SER CA C N S 402 SER C C N N 403 SER O O N N 404 SER CB C N N 405 SER OG O N N 406 SER OXT O N N 407 SER H H N N 408 SER H2 H N N 409 SER HA H N N 410 SER HB2 H N N 411 SER HB3 H N N 412 SER HG H N N 413 SER HXT H N N 414 THR N N N N 415 THR CA C N S 416 THR C C N N 417 THR O O N N 418 THR CB C N R 419 THR OG1 O N N 420 THR CG2 C N N 421 THR OXT O N N 422 THR H H N N 423 THR H2 H N N 424 THR HA H N N 425 THR HB H N N 426 THR HG1 H N N 427 THR HG21 H N N 428 THR HG22 H N N 429 THR HG23 H N N 430 THR HXT H N N 431 TRP N N N N 432 TRP CA C N S 433 TRP C C N N 434 TRP O O N N 435 TRP CB C N N 436 TRP CG C Y N 437 TRP CD1 C Y N 438 TRP CD2 C Y N 439 TRP NE1 N Y N 440 TRP CE2 C Y N 441 TRP CE3 C Y N 442 TRP CZ2 C Y N 443 TRP CZ3 C Y N 444 TRP CH2 C Y N 445 TRP OXT O N N 446 TRP H H N N 447 TRP H2 H N N 448 TRP HA H N N 449 TRP HB2 H N N 450 TRP HB3 H N N 451 TRP HD1 H N N 452 TRP HE1 H N N 453 TRP HE3 H N N 454 TRP HZ2 H N N 455 TRP HZ3 H N N 456 TRP HH2 H N N 457 TRP HXT H N N 458 TYR N N N N 459 TYR CA C N S 460 TYR C C N N 461 TYR O O N N 462 TYR CB C N N 463 TYR CG C Y N 464 TYR CD1 C Y N 465 TYR CD2 C Y N 466 TYR CE1 C Y N 467 TYR CE2 C Y N 468 TYR CZ C Y N 469 TYR OH O N N 470 TYR OXT O N N 471 TYR H H N N 472 TYR H2 H N N 473 TYR HA H N N 474 TYR HB2 H N N 475 TYR HB3 H N N 476 TYR HD1 H N N 477 TYR HD2 H N N 478 TYR HE1 H N N 479 TYR HE2 H N N 480 TYR HH H N N 481 TYR HXT H N N 482 TYS N N N N 483 TYS CA C N S 484 TYS CB C N N 485 TYS CG C Y N 486 TYS CD1 C Y N 487 TYS CD2 C Y N 488 TYS CE1 C Y N 489 TYS CE2 C Y N 490 TYS CZ C Y N 491 TYS OH O N N 492 TYS S S N N 493 TYS O1 O N N 494 TYS O2 O N N 495 TYS O3 O N N 496 TYS C C N N 497 TYS O O N N 498 TYS OXT O N N 499 TYS H H N N 500 TYS H2 H N N 501 TYS HA H N N 502 TYS HB2 H N N 503 TYS HB3 H N N 504 TYS HD1 H N N 505 TYS HD2 H N N 506 TYS HE1 H N N 507 TYS HE2 H N N 508 TYS HO3 H N N 509 TYS HXT H N N 510 VAL N N N N 511 VAL CA C N S 512 VAL C C N N 513 VAL O O N N 514 VAL CB C N N 515 VAL CG1 C N N 516 VAL CG2 C N N 517 VAL OXT O N N 518 VAL H H N N 519 VAL H2 H N N 520 VAL HA H N N 521 VAL HB H N N 522 VAL HG11 H N N 523 VAL HG12 H N N 524 VAL HG13 H N N 525 VAL HG21 H N N 526 VAL HG22 H N N 527 VAL HG23 H N N 528 VAL HXT H N N 529 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BJA C1 C2 doub Y N 70 BJA C1 C6 sing Y N 71 BJA C2 C3 sing Y N 72 BJA C3 C4 doub Y N 73 BJA C4 C5 sing Y N 74 BJA C4 C7 sing N N 75 BJA C5 C6 doub Y N 76 BJA C7 S8 sing N N 77 BJA S8 N9 sing N N 78 BJA S8 O28 doub N N 79 BJA S8 O29 doub N N 80 BJA N9 C10 sing N N 81 BJA C10 C11 sing N N 82 BJA C10 C30 sing N N 83 BJA C11 N12 sing N N 84 BJA C11 O27 doub N N 85 BJA N12 C13 sing N N 86 BJA N12 C16 sing N N 87 BJA C13 C14 sing N N 88 BJA C13 C17 sing N N 89 BJA C14 C15 sing N N 90 BJA C15 C16 sing N N 91 BJA C17 N18 sing N N 92 BJA C17 O26 doub N N 93 BJA N18 C19 sing N N 94 BJA C19 C20 sing N N 95 BJA C20 C21 doub Y N 96 BJA C20 C25 sing Y N 97 BJA C21 C22 sing Y N 98 BJA C22 C23 doub Y N 99 BJA C23 C24 sing Y N 100 BJA C23 C37 sing N N 101 BJA C24 C25 doub Y N 102 BJA C30 C31 sing N N 103 BJA C31 C32 sing N N 104 BJA C32 N33 sing N N 105 BJA N33 C34 sing N N 106 BJA C34 N35 doub N N 107 BJA C34 N36 sing N N 108 BJA C37 N38 doub N N 109 BJA C37 N39 sing N N 110 BJA C1 H1 sing N N 111 BJA C2 H2 sing N N 112 BJA C3 H3 sing N N 113 BJA C5 H5 sing N N 114 BJA C6 H6 sing N N 115 BJA C7 H7 sing N N 116 BJA C7 H7A sing N N 117 BJA N9 HN9 sing N N 118 BJA C10 H10 sing N N 119 BJA C13 H13 sing N N 120 BJA C14 H14 sing N N 121 BJA C14 H14A sing N N 122 BJA C15 H15 sing N N 123 BJA C15 H15A sing N N 124 BJA C16 H16 sing N N 125 BJA C16 H16A sing N N 126 BJA N18 HN18 sing N N 127 BJA C19 H19 sing N N 128 BJA C19 H19A sing N N 129 BJA C21 H21 sing N N 130 BJA C22 H22 sing N N 131 BJA C24 H24 sing N N 132 BJA C25 H25 sing N N 133 BJA C30 H30 sing N N 134 BJA C30 H30A sing N N 135 BJA C31 H31 sing N N 136 BJA C31 H31A sing N N 137 BJA C32 H32 sing N N 138 BJA C32 H32A sing N N 139 BJA N33 HN33 sing N N 140 BJA N35 HN35 sing N N 141 BJA N36 HN36 sing N N 142 BJA N36 HN3A sing N N 143 BJA N38 HN38 sing N N 144 BJA N39 HN39 sing N N 145 BJA N39 HN3B sing N N 146 CYS N CA sing N N 147 CYS N H sing N N 148 CYS N H2 sing N N 149 CYS CA C sing N N 150 CYS CA CB sing N N 151 CYS CA HA sing N N 152 CYS C O doub N N 153 CYS C OXT sing N N 154 CYS CB SG sing N N 155 CYS CB HB2 sing N N 156 CYS CB HB3 sing N N 157 CYS SG HG sing N N 158 CYS OXT HXT sing N N 159 GLN N CA sing N N 160 GLN N H sing N N 161 GLN N H2 sing N N 162 GLN CA C sing N N 163 GLN CA CB sing N N 164 GLN CA HA sing N N 165 GLN C O doub N N 166 GLN C OXT sing N N 167 GLN CB CG sing N N 168 GLN CB HB2 sing N N 169 GLN CB HB3 sing N N 170 GLN CG CD sing N N 171 GLN CG HG2 sing N N 172 GLN CG HG3 sing N N 173 GLN CD OE1 doub N N 174 GLN CD NE2 sing N N 175 GLN NE2 HE21 sing N N 176 GLN NE2 HE22 sing N N 177 GLN OXT HXT sing N N 178 GLU N CA sing N N 179 GLU N H sing N N 180 GLU N H2 sing N N 181 GLU CA C sing N N 182 GLU CA CB sing N N 183 GLU CA HA sing N N 184 GLU C O doub N N 185 GLU C OXT sing N N 186 GLU CB CG sing N N 187 GLU CB HB2 sing N N 188 GLU CB HB3 sing N N 189 GLU CG CD sing N N 190 GLU CG HG2 sing N N 191 GLU CG HG3 sing N N 192 GLU CD OE1 doub N N 193 GLU CD OE2 sing N N 194 GLU OE2 HE2 sing N N 195 GLU OXT HXT sing N N 196 GLY N CA sing N N 197 GLY N H sing N N 198 GLY N H2 sing N N 199 GLY CA C sing N N 200 GLY CA HA2 sing N N 201 GLY CA HA3 sing N N 202 GLY C O doub N N 203 GLY C OXT sing N N 204 GLY OXT HXT sing N N 205 HIS N CA sing N N 206 HIS N H sing N N 207 HIS N H2 sing N N 208 HIS CA C sing N N 209 HIS CA CB sing N N 210 HIS CA HA sing N N 211 HIS C O doub N N 212 HIS C OXT sing N N 213 HIS CB CG sing N N 214 HIS CB HB2 sing N N 215 HIS CB HB3 sing N N 216 HIS CG ND1 sing Y N 217 HIS CG CD2 doub Y N 218 HIS ND1 CE1 doub Y N 219 HIS ND1 HD1 sing N N 220 HIS CD2 NE2 sing Y N 221 HIS CD2 HD2 sing N N 222 HIS CE1 NE2 sing Y N 223 HIS CE1 HE1 sing N N 224 HIS NE2 HE2 sing N N 225 HIS OXT HXT sing N N 226 HOH O H1 sing N N 227 HOH O H2 sing N N 228 ILE N CA sing N N 229 ILE N H sing N N 230 ILE N H2 sing N N 231 ILE CA C sing N N 232 ILE CA CB sing N N 233 ILE CA HA sing N N 234 ILE C O doub N N 235 ILE C OXT sing N N 236 ILE CB CG1 sing N N 237 ILE CB CG2 sing N N 238 ILE CB HB sing N N 239 ILE CG1 CD1 sing N N 240 ILE CG1 HG12 sing N N 241 ILE CG1 HG13 sing N N 242 ILE CG2 HG21 sing N N 243 ILE CG2 HG22 sing N N 244 ILE CG2 HG23 sing N N 245 ILE CD1 HD11 sing N N 246 ILE CD1 HD12 sing N N 247 ILE CD1 HD13 sing N N 248 ILE OXT HXT sing N N 249 LEU N CA sing N N 250 LEU N H sing N N 251 LEU N H2 sing N N 252 LEU CA C sing N N 253 LEU CA CB sing N N 254 LEU CA HA sing N N 255 LEU C O doub N N 256 LEU C OXT sing N N 257 LEU CB CG sing N N 258 LEU CB HB2 sing N N 259 LEU CB HB3 sing N N 260 LEU CG CD1 sing N N 261 LEU CG CD2 sing N N 262 LEU CG HG sing N N 263 LEU CD1 HD11 sing N N 264 LEU CD1 HD12 sing N N 265 LEU CD1 HD13 sing N N 266 LEU CD2 HD21 sing N N 267 LEU CD2 HD22 sing N N 268 LEU CD2 HD23 sing N N 269 LEU OXT HXT sing N N 270 LYS N CA sing N N 271 LYS N H sing N N 272 LYS N H2 sing N N 273 LYS CA C sing N N 274 LYS CA CB sing N N 275 LYS CA HA sing N N 276 LYS C O doub N N 277 LYS C OXT sing N N 278 LYS CB CG sing N N 279 LYS CB HB2 sing N N 280 LYS CB HB3 sing N N 281 LYS CG CD sing N N 282 LYS CG HG2 sing N N 283 LYS CG HG3 sing N N 284 LYS CD CE sing N N 285 LYS CD HD2 sing N N 286 LYS CD HD3 sing N N 287 LYS CE NZ sing N N 288 LYS CE HE2 sing N N 289 LYS CE HE3 sing N N 290 LYS NZ HZ1 sing N N 291 LYS NZ HZ2 sing N N 292 LYS NZ HZ3 sing N N 293 LYS OXT HXT sing N N 294 MET N CA sing N N 295 MET N H sing N N 296 MET N H2 sing N N 297 MET CA C sing N N 298 MET CA CB sing N N 299 MET CA HA sing N N 300 MET C O doub N N 301 MET C OXT sing N N 302 MET CB CG sing N N 303 MET CB HB2 sing N N 304 MET CB HB3 sing N N 305 MET CG SD sing N N 306 MET CG HG2 sing N N 307 MET CG HG3 sing N N 308 MET SD CE sing N N 309 MET CE HE1 sing N N 310 MET CE HE2 sing N N 311 MET CE HE3 sing N N 312 MET OXT HXT sing N N 313 NAG C1 C2 sing N N 314 NAG C1 O1 sing N N 315 NAG C1 O5 sing N N 316 NAG C1 H1 sing N N 317 NAG C2 C3 sing N N 318 NAG C2 N2 sing N N 319 NAG C2 H2 sing N N 320 NAG C3 C4 sing N N 321 NAG C3 O3 sing N N 322 NAG C3 H3 sing N N 323 NAG C4 C5 sing N N 324 NAG C4 O4 sing N N 325 NAG C4 H4 sing N N 326 NAG C5 C6 sing N N 327 NAG C5 O5 sing N N 328 NAG C5 H5 sing N N 329 NAG C6 O6 sing N N 330 NAG C6 H61 sing N N 331 NAG C6 H62 sing N N 332 NAG C7 C8 sing N N 333 NAG C7 N2 sing N N 334 NAG C7 O7 doub N N 335 NAG C8 H81 sing N N 336 NAG C8 H82 sing N N 337 NAG C8 H83 sing N N 338 NAG N2 HN2 sing N N 339 NAG O1 HO1 sing N N 340 NAG O3 HO3 sing N N 341 NAG O4 HO4 sing N N 342 NAG O6 HO6 sing N N 343 PHE N CA sing N N 344 PHE N H sing N N 345 PHE N H2 sing N N 346 PHE CA C sing N N 347 PHE CA CB sing N N 348 PHE CA HA sing N N 349 PHE C O doub N N 350 PHE C OXT sing N N 351 PHE CB CG sing N N 352 PHE CB HB2 sing N N 353 PHE CB HB3 sing N N 354 PHE CG CD1 doub Y N 355 PHE CG CD2 sing Y N 356 PHE CD1 CE1 sing Y N 357 PHE CD1 HD1 sing N N 358 PHE CD2 CE2 doub Y N 359 PHE CD2 HD2 sing N N 360 PHE CE1 CZ doub Y N 361 PHE CE1 HE1 sing N N 362 PHE CE2 CZ sing Y N 363 PHE CE2 HE2 sing N N 364 PHE CZ HZ sing N N 365 PHE OXT HXT sing N N 366 PO4 P O1 doub N N 367 PO4 P O2 sing N N 368 PO4 P O3 sing N N 369 PO4 P O4 sing N N 370 PRO N CA sing N N 371 PRO N CD sing N N 372 PRO N H sing N N 373 PRO CA C sing N N 374 PRO CA CB sing N N 375 PRO CA HA sing N N 376 PRO C O doub N N 377 PRO C OXT sing N N 378 PRO CB CG sing N N 379 PRO CB HB2 sing N N 380 PRO CB HB3 sing N N 381 PRO CG CD sing N N 382 PRO CG HG2 sing N N 383 PRO CG HG3 sing N N 384 PRO CD HD2 sing N N 385 PRO CD HD3 sing N N 386 PRO OXT HXT sing N N 387 SER N CA sing N N 388 SER N H sing N N 389 SER N H2 sing N N 390 SER CA C sing N N 391 SER CA CB sing N N 392 SER CA HA sing N N 393 SER C O doub N N 394 SER C OXT sing N N 395 SER CB OG sing N N 396 SER CB HB2 sing N N 397 SER CB HB3 sing N N 398 SER OG HG sing N N 399 SER OXT HXT sing N N 400 THR N CA sing N N 401 THR N H sing N N 402 THR N H2 sing N N 403 THR CA C sing N N 404 THR CA CB sing N N 405 THR CA HA sing N N 406 THR C O doub N N 407 THR C OXT sing N N 408 THR CB OG1 sing N N 409 THR CB CG2 sing N N 410 THR CB HB sing N N 411 THR OG1 HG1 sing N N 412 THR CG2 HG21 sing N N 413 THR CG2 HG22 sing N N 414 THR CG2 HG23 sing N N 415 THR OXT HXT sing N N 416 TRP N CA sing N N 417 TRP N H sing N N 418 TRP N H2 sing N N 419 TRP CA C sing N N 420 TRP CA CB sing N N 421 TRP CA HA sing N N 422 TRP C O doub N N 423 TRP C OXT sing N N 424 TRP CB CG sing N N 425 TRP CB HB2 sing N N 426 TRP CB HB3 sing N N 427 TRP CG CD1 doub Y N 428 TRP CG CD2 sing Y N 429 TRP CD1 NE1 sing Y N 430 TRP CD1 HD1 sing N N 431 TRP CD2 CE2 doub Y N 432 TRP CD2 CE3 sing Y N 433 TRP NE1 CE2 sing Y N 434 TRP NE1 HE1 sing N N 435 TRP CE2 CZ2 sing Y N 436 TRP CE3 CZ3 doub Y N 437 TRP CE3 HE3 sing N N 438 TRP CZ2 CH2 doub Y N 439 TRP CZ2 HZ2 sing N N 440 TRP CZ3 CH2 sing Y N 441 TRP CZ3 HZ3 sing N N 442 TRP CH2 HH2 sing N N 443 TRP OXT HXT sing N N 444 TYR N CA sing N N 445 TYR N H sing N N 446 TYR N H2 sing N N 447 TYR CA C sing N N 448 TYR CA CB sing N N 449 TYR CA HA sing N N 450 TYR C O doub N N 451 TYR C OXT sing N N 452 TYR CB CG sing N N 453 TYR CB HB2 sing N N 454 TYR CB HB3 sing N N 455 TYR CG CD1 doub Y N 456 TYR CG CD2 sing Y N 457 TYR CD1 CE1 sing Y N 458 TYR CD1 HD1 sing N N 459 TYR CD2 CE2 doub Y N 460 TYR CD2 HD2 sing N N 461 TYR CE1 CZ doub Y N 462 TYR CE1 HE1 sing N N 463 TYR CE2 CZ sing Y N 464 TYR CE2 HE2 sing N N 465 TYR CZ OH sing N N 466 TYR OH HH sing N N 467 TYR OXT HXT sing N N 468 TYS N CA sing N N 469 TYS N H sing N N 470 TYS N H2 sing N N 471 TYS CA CB sing N N 472 TYS CA C sing N N 473 TYS CA HA sing N N 474 TYS CB CG sing N N 475 TYS CB HB2 sing N N 476 TYS CB HB3 sing N N 477 TYS CG CD1 doub Y N 478 TYS CG CD2 sing Y N 479 TYS CD1 CE1 sing Y N 480 TYS CD1 HD1 sing N N 481 TYS CD2 CE2 doub Y N 482 TYS CD2 HD2 sing N N 483 TYS CE1 CZ doub Y N 484 TYS CE1 HE1 sing N N 485 TYS CE2 CZ sing Y N 486 TYS CE2 HE2 sing N N 487 TYS CZ OH sing N N 488 TYS OH S sing N N 489 TYS S O1 doub N N 490 TYS S O2 doub N N 491 TYS S O3 sing N N 492 TYS O3 HO3 sing N N 493 TYS C O doub N N 494 TYS C OXT sing N N 495 TYS OXT HXT sing N N 496 VAL N CA sing N N 497 VAL N H sing N N 498 VAL N H2 sing N N 499 VAL CA C sing N N 500 VAL CA CB sing N N 501 VAL CA HA sing N N 502 VAL C O doub N N 503 VAL C OXT sing N N 504 VAL CB CG1 sing N N 505 VAL CB CG2 sing N N 506 VAL CB HB sing N N 507 VAL CG1 HG11 sing N N 508 VAL CG1 HG12 sing N N 509 VAL CG1 HG13 sing N N 510 VAL CG2 HG21 sing N N 511 VAL CG2 HG22 sing N N 512 VAL CG2 HG23 sing N N 513 VAL OXT HXT sing N N 514 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 '(2S)-1-[(2R)-2-(benzylsulfonylamino)-5-guanidino-pentanoyl]-N-[(4-carbamimidoylphenyl)methyl]pyrrolidine-2-carboxamide' BJA 6 'PHOSPHATE ION' PO4 7 'SODIUM ION' NA 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1H8D _pdbx_initial_refinement_model.details ? #