data_3UGP # _entry.id 3UGP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3UGP pdb_00003ugp 10.2210/pdb3ugp/pdb NDB NA1374 ? ? RCSB RCSB068732 ? ? WWPDB D_1000068732 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3UGO _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3UGP _pdbx_database_status.recvd_initial_deposition_date 2011-11-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Feklistov, A.' 1 'Darst, S.A.' 2 # _citation.id primary _citation.title 'Structural basis for promoter-10 element recognition by the bacterial RNA polymerase sigma subunit.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 147 _citation.page_first 1257 _citation.page_last 1269 _citation.year 2011 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22136875 _citation.pdbx_database_id_DOI 10.1016/j.cell.2011.10.041 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Feklistov, A.' 1 ? primary 'Darst, S.A.' 2 ? # _cell.entry_id 3UGP _cell.length_a 86.001 _cell.length_b 86.001 _cell.length_c 105.862 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3UGP _symmetry.space_group_name_H-M 'P 4 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 89 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA polymerase sigma factor' 28038.398 1 ? ? 'domain 2 (UNP residues 92-332)' ? 2 polymer syn "5'-D(*TP*GP*TP*AP*TP*AP*AP*TP*GP*GP*G)-3'" 3428.257 2 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 5 ? ? ? ? 4 water nat water 18.015 39 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPHMTSDPVRQYLHEIGQVPLLTLEEEIDLARKVEEGMEAIKKLSEATGLDQELIREVVRAKILGTARIQKIPGLKEKPD PKTVEEVDGKLKSLPKELKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRR FKFSTYATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQLQQELGREPSYEEIAEAMGPGWDAKRVEETLKIAQ EPVSL ; ;GPHMTSDPVRQYLHEIGQVPLLTLEEEIDLARKVEEGMEAIKKLSEATGLDQELIREVVRAKILGTARIQKIPGLKEKPD PKTVEEVDGKLKSLPKELKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRR FKFSTYATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQLQQELGREPSYEEIAEAMGPGWDAKRVEETLKIAQ EPVSL ; A ? 2 polydeoxyribonucleotide no no '(DT)(DG)(DT)(DA)(DT)(DA)(DA)(DT)(DG)(DG)(DG)' TGTATAATGGG B,C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 HIS n 1 4 MET n 1 5 THR n 1 6 SER n 1 7 ASP n 1 8 PRO n 1 9 VAL n 1 10 ARG n 1 11 GLN n 1 12 TYR n 1 13 LEU n 1 14 HIS n 1 15 GLU n 1 16 ILE n 1 17 GLY n 1 18 GLN n 1 19 VAL n 1 20 PRO n 1 21 LEU n 1 22 LEU n 1 23 THR n 1 24 LEU n 1 25 GLU n 1 26 GLU n 1 27 GLU n 1 28 ILE n 1 29 ASP n 1 30 LEU n 1 31 ALA n 1 32 ARG n 1 33 LYS n 1 34 VAL n 1 35 GLU n 1 36 GLU n 1 37 GLY n 1 38 MET n 1 39 GLU n 1 40 ALA n 1 41 ILE n 1 42 LYS n 1 43 LYS n 1 44 LEU n 1 45 SER n 1 46 GLU n 1 47 ALA n 1 48 THR n 1 49 GLY n 1 50 LEU n 1 51 ASP n 1 52 GLN n 1 53 GLU n 1 54 LEU n 1 55 ILE n 1 56 ARG n 1 57 GLU n 1 58 VAL n 1 59 VAL n 1 60 ARG n 1 61 ALA n 1 62 LYS n 1 63 ILE n 1 64 LEU n 1 65 GLY n 1 66 THR n 1 67 ALA n 1 68 ARG n 1 69 ILE n 1 70 GLN n 1 71 LYS n 1 72 ILE n 1 73 PRO n 1 74 GLY n 1 75 LEU n 1 76 LYS n 1 77 GLU n 1 78 LYS n 1 79 PRO n 1 80 ASP n 1 81 PRO n 1 82 LYS n 1 83 THR n 1 84 VAL n 1 85 GLU n 1 86 GLU n 1 87 VAL n 1 88 ASP n 1 89 GLY n 1 90 LYS n 1 91 LEU n 1 92 LYS n 1 93 SER n 1 94 LEU n 1 95 PRO n 1 96 LYS n 1 97 GLU n 1 98 LEU n 1 99 LYS n 1 100 ARG n 1 101 TYR n 1 102 LEU n 1 103 HIS n 1 104 ILE n 1 105 ALA n 1 106 ARG n 1 107 GLU n 1 108 GLY n 1 109 GLU n 1 110 ALA n 1 111 ALA n 1 112 ARG n 1 113 GLN n 1 114 HIS n 1 115 LEU n 1 116 ILE n 1 117 GLU n 1 118 ALA n 1 119 ASN n 1 120 LEU n 1 121 ARG n 1 122 LEU n 1 123 VAL n 1 124 VAL n 1 125 SER n 1 126 ILE n 1 127 ALA n 1 128 LYS n 1 129 LYS n 1 130 TYR n 1 131 THR n 1 132 GLY n 1 133 ARG n 1 134 GLY n 1 135 LEU n 1 136 SER n 1 137 PHE n 1 138 LEU n 1 139 ASP n 1 140 LEU n 1 141 ILE n 1 142 GLN n 1 143 GLU n 1 144 GLY n 1 145 ASN n 1 146 GLN n 1 147 GLY n 1 148 LEU n 1 149 ILE n 1 150 ARG n 1 151 ALA n 1 152 VAL n 1 153 GLU n 1 154 LYS n 1 155 PHE n 1 156 GLU n 1 157 TYR n 1 158 LYS n 1 159 ARG n 1 160 ARG n 1 161 PHE n 1 162 LYS n 1 163 PHE n 1 164 SER n 1 165 THR n 1 166 TYR n 1 167 ALA n 1 168 THR n 1 169 TRP n 1 170 TRP n 1 171 ILE n 1 172 ARG n 1 173 GLN n 1 174 ALA n 1 175 ILE n 1 176 ASN n 1 177 ARG n 1 178 ALA n 1 179 ILE n 1 180 ALA n 1 181 ASP n 1 182 GLN n 1 183 ALA n 1 184 ARG n 1 185 THR n 1 186 ILE n 1 187 ARG n 1 188 ILE n 1 189 PRO n 1 190 VAL n 1 191 HIS n 1 192 MET n 1 193 VAL n 1 194 GLU n 1 195 THR n 1 196 ILE n 1 197 ASN n 1 198 LYS n 1 199 LEU n 1 200 SER n 1 201 ARG n 1 202 THR n 1 203 ALA n 1 204 ARG n 1 205 GLN n 1 206 LEU n 1 207 GLN n 1 208 GLN n 1 209 GLU n 1 210 LEU n 1 211 GLY n 1 212 ARG n 1 213 GLU n 1 214 PRO n 1 215 SER n 1 216 TYR n 1 217 GLU n 1 218 GLU n 1 219 ILE n 1 220 ALA n 1 221 GLU n 1 222 ALA n 1 223 MET n 1 224 GLY n 1 225 PRO n 1 226 GLY n 1 227 TRP n 1 228 ASP n 1 229 ALA n 1 230 LYS n 1 231 ARG n 1 232 VAL n 1 233 GLU n 1 234 GLU n 1 235 THR n 1 236 LEU n 1 237 LYS n 1 238 ILE n 1 239 ALA n 1 240 GLN n 1 241 GLU n 1 242 PRO n 1 243 VAL n 1 244 SER n 1 245 LEU n 2 1 DT n 2 2 DG n 2 3 DT n 2 4 DA n 2 5 DT n 2 6 DA n 2 7 DA n 2 8 DT n 2 9 DG n 2 10 DG n 2 11 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus aquaticus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 271 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q9EZJ8_THEAQ Q9EZJ8 1 ;TSDPVRQYLHEIGQVPLLTLEEEIDLARKVEEGMEAIKKLSEATGLDQELIREVVRAKILGTARIQKIPGLKEKPDPKTV EEVDGKLKSLPKELKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFS TYATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQLQQELGREPSYEEIAEAMGPGWDAKRVEETLKIAQEPVS L ; 92 ? 2 PDB 3UGP 3UGP 2 TGTATAATGGG ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3UGP A 5 ? 245 ? Q9EZJ8 92 ? 332 ? 92 332 2 2 3UGP B 1 ? 11 ? 3UGP 1 ? 11 ? 1 11 3 2 3UGP C 1 ? 11 ? 3UGP 1 ? 11 ? 1 11 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3UGP GLY A 1 ? UNP Q9EZJ8 ? ? 'expression tag' 88 1 1 3UGP PRO A 2 ? UNP Q9EZJ8 ? ? 'expression tag' 89 2 1 3UGP HIS A 3 ? UNP Q9EZJ8 ? ? 'expression tag' 90 3 1 3UGP MET A 4 ? UNP Q9EZJ8 ? ? 'expression tag' 91 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3UGP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.80 _exptl_crystal.density_percent_sol 56.15 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '5% PEG8000, 20% PEG300, 10% glycerol, 0.15% mellitic acid, 100 mM Tris, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 77 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-08-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_wavelength 0.97918 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3UGP _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 2.697 _reflns.number_obs 11450 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.10500 _reflns.pdbx_Rsym_value 0.10500 _reflns.pdbx_netI_over_sigmaI 31.6300 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.800 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.697 _reflns_shell.d_res_low 2.80 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.52000 _reflns_shell.pdbx_Rsym_value 0.52000 _reflns_shell.meanI_over_sigI_obs 6.770 _reflns_shell.pdbx_redundancy 9.20 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3UGP _refine.ls_number_reflns_obs 11419 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.22 _refine.ls_d_res_high 2.697 _refine.ls_percent_reflns_obs 99.3 _refine.ls_R_factor_obs 0.198 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.196 _refine.ls_R_factor_R_free 0.238 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.780 _refine.ls_number_reflns_R_free 546 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -9.72190 _refine.aniso_B[2][2] -9.72190 _refine.aniso_B[3][3] 19.44380 _refine.aniso_B[1][2] -0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] -0.00000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.34 _refine.solvent_model_param_bsol 26.45 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1KU2' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.310 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1449 _refine_hist.pdbx_number_atoms_nucleic_acid 318 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 1811 _refine_hist.d_res_high 2.697 _refine_hist.d_res_low 29.22 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.009 ? ? 1859 ? 'X-RAY DIFFRACTION' f_angle_d 1.425 ? ? 2571 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 21.707 ? ? 743 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.120 ? ? 284 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 276 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.697 2.9679 2639 0.2261 99.00 0.2995 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.9679 3.3968 2654 0.2083 99.00 0.2532 . . 128 . . . . 'X-RAY DIFFRACTION' . 3.3968 4.2775 2712 0.1693 100.00 0.2110 . . 140 . . . . 'X-RAY DIFFRACTION' . 4.2775 29.2261 2868 0.1891 99.00 0.2199 . . 140 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3UGP _struct.title 'Crystal structure of RNA-polymerase sigma subunit domain 2 complexed with -10 promoter element ssDNA oligo (TATAAT)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3UGP _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'protein-DNA complex, bacterial promoter opening, G-quartet, G-quadruplex, DNA binding, TRANSCRIPTION-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 4 ? K N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? GLN A 18 ? SER A 93 GLN A 105 1 ? 13 HELX_P HELX_P2 2 THR A 23 ? GLY A 49 ? THR A 110 GLY A 136 1 ? 27 HELX_P HELX_P3 3 ASP A 51 ? LYS A 62 ? ASP A 138 LYS A 149 1 ? 12 HELX_P HELX_P4 4 ILE A 63 ? ALA A 67 ? ILE A 150 ALA A 154 5 ? 5 HELX_P HELX_P5 5 ASP A 80 ? SER A 93 ? ASP A 167 SER A 180 1 ? 14 HELX_P HELX_P6 6 PRO A 95 ? ALA A 118 ? PRO A 182 ALA A 205 1 ? 24 HELX_P HELX_P7 7 ASN A 119 ? LYS A 129 ? ASN A 206 LYS A 216 1 ? 11 HELX_P HELX_P8 8 SER A 136 ? PHE A 155 ? SER A 223 PHE A 242 1 ? 20 HELX_P HELX_P9 9 GLU A 156 ? ARG A 160 ? GLU A 243 ARG A 247 5 ? 5 HELX_P HELX_P10 10 LYS A 162 ? ALA A 183 ? LYS A 249 ALA A 270 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B DG 9 O6 ? ? ? 1_555 D K . K ? ? B DG 9 B K 12 1_555 ? ? ? ? ? ? ? 3.015 ? ? metalc2 metalc ? ? B DG 9 O6 ? ? ? 1_555 F K . K ? ? B DG 9 B K 14 1_555 ? ? ? ? ? ? ? 3.149 ? ? metalc3 metalc ? ? B DG 10 O6 ? ? ? 1_555 E K . K ? ? B DG 10 B K 13 1_555 ? ? ? ? ? ? ? 3.248 ? ? metalc4 metalc ? ? B DG 10 O6 ? ? ? 1_555 F K . K ? ? B DG 10 B K 14 1_555 ? ? ? ? ? ? ? 2.943 ? ? metalc5 metalc ? ? B DG 11 O6 ? ? ? 1_555 E K . K ? ? B DG 11 B K 13 1_555 ? ? ? ? ? ? ? 2.842 ? ? metalc6 metalc ? ? D K . K ? ? ? 1_555 C DG 11 O6 ? ? B K 12 C DG 11 1_555 ? ? ? ? ? ? ? 3.098 ? ? metalc7 metalc ? ? C DG 9 O6 ? ? ? 1_555 H K . K ? ? C DG 9 C K 13 1_555 ? ? ? ? ? ? ? 2.890 ? ? metalc8 metalc ? ? C DG 10 O6 ? ? ? 1_555 G K . K ? ? C DG 10 C K 12 1_555 ? ? ? ? ? ? ? 2.963 ? ? metalc9 metalc ? ? C DG 10 O6 ? ? ? 1_555 H K . K ? ? C DG 10 C K 13 1_555 ? ? ? ? ? ? ? 3.420 ? ? metalc10 metalc ? ? C DG 11 O6 ? ? ? 1_555 G K . K ? ? C DG 11 C K 12 1_555 ? ? ? ? ? ? ? 3.092 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B K 12 ? 16 'BINDING SITE FOR RESIDUE K B 12' AC2 Software B K 13 ? 8 'BINDING SITE FOR RESIDUE K B 13' AC3 Software B K 14 ? 12 'BINDING SITE FOR RESIDUE K B 14' AC4 Software C K 12 ? 12 'BINDING SITE FOR RESIDUE K C 12' AC5 Software C K 13 ? 8 'BINDING SITE FOR RESIDUE K C 13' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 DG B 9 ? DG B 9 . ? 2_555 ? 2 AC1 16 DG B 9 ? DG B 9 . ? 3_555 ? 3 AC1 16 DG B 9 ? DG B 9 . ? 1_555 ? 4 AC1 16 DG B 9 ? DG B 9 . ? 4_555 ? 5 AC1 16 K F . ? K B 14 . ? 1_555 ? 6 AC1 16 K F . ? K B 14 . ? 2_555 ? 7 AC1 16 K F . ? K B 14 . ? 3_555 ? 8 AC1 16 K F . ? K B 14 . ? 4_555 ? 9 AC1 16 DG C 11 ? DG C 11 . ? 4_555 ? 10 AC1 16 DG C 11 ? DG C 11 . ? 1_555 ? 11 AC1 16 DG C 11 ? DG C 11 . ? 2_555 ? 12 AC1 16 DG C 11 ? DG C 11 . ? 3_555 ? 13 AC1 16 K G . ? K C 12 . ? 3_555 ? 14 AC1 16 K G . ? K C 12 . ? 4_555 ? 15 AC1 16 K G . ? K C 12 . ? 2_555 ? 16 AC1 16 K G . ? K C 12 . ? 1_555 ? 17 AC2 8 DG B 10 ? DG B 10 . ? 2_555 ? 18 AC2 8 DG B 10 ? DG B 10 . ? 1_555 ? 19 AC2 8 DG B 10 ? DG B 10 . ? 3_555 ? 20 AC2 8 DG B 10 ? DG B 10 . ? 4_555 ? 21 AC2 8 DG B 11 ? DG B 11 . ? 1_555 ? 22 AC2 8 DG B 11 ? DG B 11 . ? 2_555 ? 23 AC2 8 DG B 11 ? DG B 11 . ? 3_555 ? 24 AC2 8 DG B 11 ? DG B 11 . ? 4_555 ? 25 AC3 12 DG B 9 ? DG B 9 . ? 2_555 ? 26 AC3 12 DG B 9 ? DG B 9 . ? 3_555 ? 27 AC3 12 DG B 9 ? DG B 9 . ? 1_555 ? 28 AC3 12 DG B 9 ? DG B 9 . ? 4_555 ? 29 AC3 12 DG B 10 ? DG B 10 . ? 4_555 ? 30 AC3 12 DG B 10 ? DG B 10 . ? 2_555 ? 31 AC3 12 DG B 10 ? DG B 10 . ? 1_555 ? 32 AC3 12 DG B 10 ? DG B 10 . ? 3_555 ? 33 AC3 12 K D . ? K B 12 . ? 3_555 ? 34 AC3 12 K D . ? K B 12 . ? 4_555 ? 35 AC3 12 K D . ? K B 12 . ? 2_555 ? 36 AC3 12 K D . ? K B 12 . ? 1_555 ? 37 AC4 12 K D . ? K B 12 . ? 1_555 ? 38 AC4 12 K D . ? K B 12 . ? 2_555 ? 39 AC4 12 K D . ? K B 12 . ? 3_555 ? 40 AC4 12 K D . ? K B 12 . ? 4_555 ? 41 AC4 12 DG C 10 ? DG C 10 . ? 1_555 ? 42 AC4 12 DG C 10 ? DG C 10 . ? 4_555 ? 43 AC4 12 DG C 10 ? DG C 10 . ? 3_555 ? 44 AC4 12 DG C 10 ? DG C 10 . ? 2_555 ? 45 AC4 12 DG C 11 ? DG C 11 . ? 4_555 ? 46 AC4 12 DG C 11 ? DG C 11 . ? 3_555 ? 47 AC4 12 DG C 11 ? DG C 11 . ? 1_555 ? 48 AC4 12 DG C 11 ? DG C 11 . ? 2_555 ? 49 AC5 8 DG C 9 ? DG C 9 . ? 3_555 ? 50 AC5 8 DG C 9 ? DG C 9 . ? 1_555 ? 51 AC5 8 DG C 9 ? DG C 9 . ? 4_555 ? 52 AC5 8 DG C 9 ? DG C 9 . ? 2_555 ? 53 AC5 8 DG C 10 ? DG C 10 . ? 4_555 ? 54 AC5 8 DG C 10 ? DG C 10 . ? 2_555 ? 55 AC5 8 DG C 10 ? DG C 10 . ? 1_555 ? 56 AC5 8 DG C 10 ? DG C 10 . ? 3_555 ? # _database_PDB_matrix.entry_id 3UGP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3UGP _atom_sites.fract_transf_matrix[1][1] 0.011628 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011628 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009446 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 88 ? ? ? A . n A 1 2 PRO 2 89 ? ? ? A . n A 1 3 HIS 3 90 ? ? ? A . n A 1 4 MET 4 91 ? ? ? A . n A 1 5 THR 5 92 ? ? ? A . n A 1 6 SER 6 93 93 SER SER A . n A 1 7 ASP 7 94 94 ASP ASP A . n A 1 8 PRO 8 95 95 PRO PRO A . n A 1 9 VAL 9 96 96 VAL VAL A . n A 1 10 ARG 10 97 97 ARG ARG A . n A 1 11 GLN 11 98 98 GLN GLN A . n A 1 12 TYR 12 99 99 TYR TYR A . n A 1 13 LEU 13 100 100 LEU LEU A . n A 1 14 HIS 14 101 101 HIS HIS A . n A 1 15 GLU 15 102 102 GLU GLU A . n A 1 16 ILE 16 103 103 ILE ILE A . n A 1 17 GLY 17 104 104 GLY GLY A . n A 1 18 GLN 18 105 105 GLN GLN A . n A 1 19 VAL 19 106 106 VAL VAL A . n A 1 20 PRO 20 107 107 PRO PRO A . n A 1 21 LEU 21 108 108 LEU LEU A . n A 1 22 LEU 22 109 109 LEU LEU A . n A 1 23 THR 23 110 110 THR THR A . n A 1 24 LEU 24 111 111 LEU LEU A . n A 1 25 GLU 25 112 112 GLU GLU A . n A 1 26 GLU 26 113 113 GLU GLU A . n A 1 27 GLU 27 114 114 GLU GLU A . n A 1 28 ILE 28 115 115 ILE ILE A . n A 1 29 ASP 29 116 116 ASP ASP A . n A 1 30 LEU 30 117 117 LEU LEU A . n A 1 31 ALA 31 118 118 ALA ALA A . n A 1 32 ARG 32 119 119 ARG ARG A . n A 1 33 LYS 33 120 120 LYS LYS A . n A 1 34 VAL 34 121 121 VAL VAL A . n A 1 35 GLU 35 122 122 GLU GLU A . n A 1 36 GLU 36 123 123 GLU GLU A . n A 1 37 GLY 37 124 124 GLY GLY A . n A 1 38 MET 38 125 125 MET MET A . n A 1 39 GLU 39 126 126 GLU GLU A . n A 1 40 ALA 40 127 127 ALA ALA A . n A 1 41 ILE 41 128 128 ILE ILE A . n A 1 42 LYS 42 129 129 LYS LYS A . n A 1 43 LYS 43 130 130 LYS LYS A . n A 1 44 LEU 44 131 131 LEU LEU A . n A 1 45 SER 45 132 132 SER SER A . n A 1 46 GLU 46 133 133 GLU GLU A . n A 1 47 ALA 47 134 134 ALA ALA A . n A 1 48 THR 48 135 135 THR THR A . n A 1 49 GLY 49 136 136 GLY GLY A . n A 1 50 LEU 50 137 137 LEU LEU A . n A 1 51 ASP 51 138 138 ASP ASP A . n A 1 52 GLN 52 139 139 GLN GLN A . n A 1 53 GLU 53 140 140 GLU GLU A . n A 1 54 LEU 54 141 141 LEU LEU A . n A 1 55 ILE 55 142 142 ILE ILE A . n A 1 56 ARG 56 143 143 ARG ARG A . n A 1 57 GLU 57 144 144 GLU GLU A . n A 1 58 VAL 58 145 145 VAL VAL A . n A 1 59 VAL 59 146 146 VAL VAL A . n A 1 60 ARG 60 147 147 ARG ARG A . n A 1 61 ALA 61 148 148 ALA ALA A . n A 1 62 LYS 62 149 149 LYS LYS A . n A 1 63 ILE 63 150 150 ILE ILE A . n A 1 64 LEU 64 151 151 LEU LEU A . n A 1 65 GLY 65 152 152 GLY GLY A . n A 1 66 THR 66 153 153 THR THR A . n A 1 67 ALA 67 154 154 ALA ALA A . n A 1 68 ARG 68 155 155 ARG ARG A . n A 1 69 ILE 69 156 156 ILE ILE A . n A 1 70 GLN 70 157 157 GLN GLN A . n A 1 71 LYS 71 158 158 LYS LYS A . n A 1 72 ILE 72 159 159 ILE ILE A . n A 1 73 PRO 73 160 160 PRO PRO A . n A 1 74 GLY 74 161 161 GLY GLY A . n A 1 75 LEU 75 162 162 LEU LEU A . n A 1 76 LYS 76 163 163 LYS LYS A . n A 1 77 GLU 77 164 164 GLU GLU A . n A 1 78 LYS 78 165 165 LYS LYS A . n A 1 79 PRO 79 166 166 PRO PRO A . n A 1 80 ASP 80 167 167 ASP ASP A . n A 1 81 PRO 81 168 168 PRO PRO A . n A 1 82 LYS 82 169 169 LYS LYS A . n A 1 83 THR 83 170 170 THR THR A . n A 1 84 VAL 84 171 171 VAL VAL A . n A 1 85 GLU 85 172 172 GLU GLU A . n A 1 86 GLU 86 173 173 GLU GLU A . n A 1 87 VAL 87 174 174 VAL VAL A . n A 1 88 ASP 88 175 175 ASP ASP A . n A 1 89 GLY 89 176 176 GLY GLY A . n A 1 90 LYS 90 177 177 LYS LYS A . n A 1 91 LEU 91 178 178 LEU LEU A . n A 1 92 LYS 92 179 179 LYS LYS A . n A 1 93 SER 93 180 180 SER SER A . n A 1 94 LEU 94 181 181 LEU LEU A . n A 1 95 PRO 95 182 182 PRO PRO A . n A 1 96 LYS 96 183 183 LYS LYS A . n A 1 97 GLU 97 184 184 GLU GLU A . n A 1 98 LEU 98 185 185 LEU LEU A . n A 1 99 LYS 99 186 186 LYS LYS A . n A 1 100 ARG 100 187 187 ARG ARG A . n A 1 101 TYR 101 188 188 TYR TYR A . n A 1 102 LEU 102 189 189 LEU LEU A . n A 1 103 HIS 103 190 190 HIS HIS A . n A 1 104 ILE 104 191 191 ILE ILE A . n A 1 105 ALA 105 192 192 ALA ALA A . n A 1 106 ARG 106 193 193 ARG ARG A . n A 1 107 GLU 107 194 194 GLU GLU A . n A 1 108 GLY 108 195 195 GLY GLY A . n A 1 109 GLU 109 196 196 GLU GLU A . n A 1 110 ALA 110 197 197 ALA ALA A . n A 1 111 ALA 111 198 198 ALA ALA A . n A 1 112 ARG 112 199 199 ARG ARG A . n A 1 113 GLN 113 200 200 GLN GLN A . n A 1 114 HIS 114 201 201 HIS HIS A . n A 1 115 LEU 115 202 202 LEU LEU A . n A 1 116 ILE 116 203 203 ILE ILE A . n A 1 117 GLU 117 204 204 GLU GLU A . n A 1 118 ALA 118 205 205 ALA ALA A . n A 1 119 ASN 119 206 206 ASN ASN A . n A 1 120 LEU 120 207 207 LEU LEU A . n A 1 121 ARG 121 208 208 ARG ARG A . n A 1 122 LEU 122 209 209 LEU LEU A . n A 1 123 VAL 123 210 210 VAL VAL A . n A 1 124 VAL 124 211 211 VAL VAL A . n A 1 125 SER 125 212 212 SER SER A . n A 1 126 ILE 126 213 213 ILE ILE A . n A 1 127 ALA 127 214 214 ALA ALA A . n A 1 128 LYS 128 215 215 LYS LYS A . n A 1 129 LYS 129 216 216 LYS LYS A . n A 1 130 TYR 130 217 217 TYR TYR A . n A 1 131 THR 131 218 218 THR THR A . n A 1 132 GLY 132 219 219 GLY GLY A . n A 1 133 ARG 133 220 220 ARG ARG A . n A 1 134 GLY 134 221 221 GLY GLY A . n A 1 135 LEU 135 222 222 LEU LEU A . n A 1 136 SER 136 223 223 SER SER A . n A 1 137 PHE 137 224 224 PHE PHE A . n A 1 138 LEU 138 225 225 LEU LEU A . n A 1 139 ASP 139 226 226 ASP ASP A . n A 1 140 LEU 140 227 227 LEU LEU A . n A 1 141 ILE 141 228 228 ILE ILE A . n A 1 142 GLN 142 229 229 GLN GLN A . n A 1 143 GLU 143 230 230 GLU GLU A . n A 1 144 GLY 144 231 231 GLY GLY A . n A 1 145 ASN 145 232 232 ASN ASN A . n A 1 146 GLN 146 233 233 GLN GLN A . n A 1 147 GLY 147 234 234 GLY GLY A . n A 1 148 LEU 148 235 235 LEU LEU A . n A 1 149 ILE 149 236 236 ILE ILE A . n A 1 150 ARG 150 237 237 ARG ARG A . n A 1 151 ALA 151 238 238 ALA ALA A . n A 1 152 VAL 152 239 239 VAL VAL A . n A 1 153 GLU 153 240 240 GLU GLU A . n A 1 154 LYS 154 241 241 LYS LYS A . n A 1 155 PHE 155 242 242 PHE PHE A . n A 1 156 GLU 156 243 243 GLU GLU A . n A 1 157 TYR 157 244 244 TYR TYR A . n A 1 158 LYS 158 245 245 LYS LYS A . n A 1 159 ARG 159 246 246 ARG ARG A . n A 1 160 ARG 160 247 247 ARG ARG A . n A 1 161 PHE 161 248 248 PHE PHE A . n A 1 162 LYS 162 249 249 LYS LYS A . n A 1 163 PHE 163 250 250 PHE PHE A . n A 1 164 SER 164 251 251 SER SER A . n A 1 165 THR 165 252 252 THR THR A . n A 1 166 TYR 166 253 253 TYR TYR A . n A 1 167 ALA 167 254 254 ALA ALA A . n A 1 168 THR 168 255 255 THR THR A . n A 1 169 TRP 169 256 256 TRP TRP A . n A 1 170 TRP 170 257 257 TRP TRP A . n A 1 171 ILE 171 258 258 ILE ILE A . n A 1 172 ARG 172 259 259 ARG ARG A . n A 1 173 GLN 173 260 260 GLN GLN A . n A 1 174 ALA 174 261 261 ALA ALA A . n A 1 175 ILE 175 262 262 ILE ILE A . n A 1 176 ASN 176 263 263 ASN ASN A . n A 1 177 ARG 177 264 264 ARG ARG A . n A 1 178 ALA 178 265 265 ALA ALA A . n A 1 179 ILE 179 266 266 ILE ILE A . n A 1 180 ALA 180 267 267 ALA ALA A . n A 1 181 ASP 181 268 268 ASP ASP A . n A 1 182 GLN 182 269 269 GLN GLN A . n A 1 183 ALA 183 270 270 ALA ALA A . n A 1 184 ARG 184 271 271 ARG ARG A . n A 1 185 THR 185 272 ? ? ? A . n A 1 186 ILE 186 273 ? ? ? A . n A 1 187 ARG 187 274 ? ? ? A . n A 1 188 ILE 188 275 ? ? ? A . n A 1 189 PRO 189 276 ? ? ? A . n A 1 190 VAL 190 277 ? ? ? A . n A 1 191 HIS 191 278 ? ? ? A . n A 1 192 MET 192 279 ? ? ? A . n A 1 193 VAL 193 280 ? ? ? A . n A 1 194 GLU 194 281 ? ? ? A . n A 1 195 THR 195 282 ? ? ? A . n A 1 196 ILE 196 283 ? ? ? A . n A 1 197 ASN 197 284 ? ? ? A . n A 1 198 LYS 198 285 ? ? ? A . n A 1 199 LEU 199 286 ? ? ? A . n A 1 200 SER 200 287 ? ? ? A . n A 1 201 ARG 201 288 ? ? ? A . n A 1 202 THR 202 289 ? ? ? A . n A 1 203 ALA 203 290 ? ? ? A . n A 1 204 ARG 204 291 ? ? ? A . n A 1 205 GLN 205 292 ? ? ? A . n A 1 206 LEU 206 293 ? ? ? A . n A 1 207 GLN 207 294 ? ? ? A . n A 1 208 GLN 208 295 ? ? ? A . n A 1 209 GLU 209 296 ? ? ? A . n A 1 210 LEU 210 297 ? ? ? A . n A 1 211 GLY 211 298 ? ? ? A . n A 1 212 ARG 212 299 ? ? ? A . n A 1 213 GLU 213 300 ? ? ? A . n A 1 214 PRO 214 301 ? ? ? A . n A 1 215 SER 215 302 ? ? ? A . n A 1 216 TYR 216 303 ? ? ? A . n A 1 217 GLU 217 304 ? ? ? A . n A 1 218 GLU 218 305 ? ? ? A . n A 1 219 ILE 219 306 ? ? ? A . n A 1 220 ALA 220 307 ? ? ? A . n A 1 221 GLU 221 308 ? ? ? A . n A 1 222 ALA 222 309 ? ? ? A . n A 1 223 MET 223 310 ? ? ? A . n A 1 224 GLY 224 311 ? ? ? A . n A 1 225 PRO 225 312 ? ? ? A . n A 1 226 GLY 226 313 ? ? ? A . n A 1 227 TRP 227 314 ? ? ? A . n A 1 228 ASP 228 315 ? ? ? A . n A 1 229 ALA 229 316 ? ? ? A . n A 1 230 LYS 230 317 ? ? ? A . n A 1 231 ARG 231 318 ? ? ? A . n A 1 232 VAL 232 319 ? ? ? A . n A 1 233 GLU 233 320 ? ? ? A . n A 1 234 GLU 234 321 ? ? ? A . n A 1 235 THR 235 322 ? ? ? A . n A 1 236 LEU 236 323 ? ? ? A . n A 1 237 LYS 237 324 ? ? ? A . n A 1 238 ILE 238 325 ? ? ? A . n A 1 239 ALA 239 326 ? ? ? A . n A 1 240 GLN 240 327 ? ? ? A . n A 1 241 GLU 241 328 ? ? ? A . n A 1 242 PRO 242 329 ? ? ? A . n A 1 243 VAL 243 330 ? ? ? A . n A 1 244 SER 244 331 ? ? ? A . n A 1 245 LEU 245 332 ? ? ? A . n B 2 1 DT 1 1 ? ? ? B . n B 2 2 DG 2 2 2 DG DG B . n B 2 3 DT 3 3 3 DT DT B . n B 2 4 DA 4 4 4 DA DA B . n B 2 5 DT 5 5 5 DT DT B . n B 2 6 DA 6 6 6 DA DA B . n B 2 7 DA 7 7 7 DA DA B . n B 2 8 DT 8 8 8 DT DT B . n B 2 9 DG 9 9 9 DG DG B . n B 2 10 DG 10 10 10 DG DG B . n B 2 11 DG 11 11 11 DG DG B . n C 2 1 DT 1 1 ? ? ? C . n C 2 2 DG 2 2 ? ? ? C . n C 2 3 DT 3 3 ? ? ? C . n C 2 4 DA 4 4 ? ? ? C . n C 2 5 DT 5 5 ? ? ? C . n C 2 6 DA 6 6 ? ? ? C . n C 2 7 DA 7 7 7 DA DA C . n C 2 8 DT 8 8 8 DT DT C . n C 2 9 DG 9 9 9 DG DG C . n C 2 10 DG 10 10 10 DG DG C . n C 2 11 DG 11 11 11 DG DG C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 K 1 12 12 K K B . E 3 K 1 13 13 K K B . F 3 K 1 14 14 K K B . G 3 K 1 12 12 K K C . H 3 K 1 13 13 K K C . I 4 HOH 1 1 1 HOH HOH A . I 4 HOH 2 2 2 HOH HOH A . I 4 HOH 3 4 4 HOH HOH A . I 4 HOH 4 5 5 HOH HOH A . I 4 HOH 5 9 9 HOH HOH A . I 4 HOH 6 10 10 HOH HOH A . I 4 HOH 7 12 12 HOH HOH A . I 4 HOH 8 13 13 HOH HOH A . I 4 HOH 9 14 14 HOH HOH A . I 4 HOH 10 17 17 HOH HOH A . I 4 HOH 11 18 18 HOH HOH A . I 4 HOH 12 19 19 HOH HOH A . I 4 HOH 13 20 20 HOH HOH A . I 4 HOH 14 21 21 HOH HOH A . I 4 HOH 15 23 23 HOH HOH A . I 4 HOH 16 25 25 HOH HOH A . I 4 HOH 17 26 26 HOH HOH A . I 4 HOH 18 28 28 HOH HOH A . I 4 HOH 19 29 29 HOH HOH A . I 4 HOH 20 30 30 HOH HOH A . I 4 HOH 21 33 33 HOH HOH A . I 4 HOH 22 34 34 HOH HOH A . I 4 HOH 23 35 35 HOH HOH A . I 4 HOH 24 39 39 HOH HOH A . J 4 HOH 1 15 15 HOH HOH B . J 4 HOH 2 16 16 HOH HOH B . J 4 HOH 3 17 17 HOH HOH B . J 4 HOH 4 18 18 HOH HOH B . J 4 HOH 5 19 19 HOH HOH B . J 4 HOH 6 20 20 HOH HOH B . J 4 HOH 7 22 22 HOH HOH B . J 4 HOH 8 27 27 HOH HOH B . J 4 HOH 9 31 31 HOH HOH B . J 4 HOH 10 32 32 HOH HOH B . J 4 HOH 11 36 36 HOH HOH B . J 4 HOH 12 37 37 HOH HOH B . J 4 HOH 13 38 38 HOH HOH B . K 4 HOH 1 14 14 HOH HOH C . K 4 HOH 2 24 24 HOH HOH C . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,D,E,F,I,J 2 1,2,3,4 C,G,H,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1850 ? 1 MORE -3 ? 1 'SSA (A^2)' 11260 ? 2 'ABSA (A^2)' 3620 ? 2 MORE -24 ? 2 'SSA (A^2)' 3240 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -y,x,z 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 y,-x,z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B K 12 ? D K . 2 1 B K 13 ? E K . 3 1 B K 14 ? F K . 4 1 C K 12 ? G K . 5 1 C K 13 ? H K . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? D K . ? B K 12 ? 1_555 O6 ? C DG 11 ? C DG 11 ? 1_555 70.8 ? 2 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? F K . ? B K 14 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 78.9 ? 3 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? E K . ? B K 13 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 62.6 ? 4 O6 ? C DG 9 ? C DG 9 ? 1_555 K ? H K . ? C K 13 ? 1_555 O6 ? C DG 10 ? C DG 10 ? 1_555 65.0 ? 5 O6 ? C DG 10 ? C DG 10 ? 1_555 K ? G K . ? C K 12 ? 1_555 O6 ? C DG 11 ? C DG 11 ? 1_555 75.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-12-07 2 'Structure model' 1 1 2012-03-07 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.value' 15 3 'Structure model' '_struct_conn.pdbx_dist_value' 16 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 17 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 3 'Structure model' '_struct_ref_seq_dif.details' 31 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX 'model building' '(PHENIX.REFINE: 1.5_2)' ? 1 PHENIX refinement '(PHENIX.REFINE: 1.5_2)' ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 PHENIX phasing 1.5_2 ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? N9 B DA 6 ? ? 102.78 108.00 -5.22 0.70 N 2 1 "O4'" B DA 7 ? ? "C1'" B DA 7 ? ? N9 B DA 7 ? ? 112.29 108.30 3.99 0.30 N 3 1 C4 B DG 9 ? ? C5 B DG 9 ? ? N7 B DG 9 ? ? 113.48 110.80 2.68 0.40 N 4 1 C5 B DG 9 ? ? C6 B DG 9 ? ? O6 B DG 9 ? ? 123.58 128.60 -5.02 0.60 N 5 1 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 103.31 108.00 -4.69 0.70 N 6 1 C4 B DG 10 ? ? C5 B DG 10 ? ? N7 B DG 10 ? ? 113.77 110.80 2.97 0.40 N 7 1 C5 B DG 11 ? ? C6 B DG 11 ? ? O6 B DG 11 ? ? 123.59 128.60 -5.01 0.60 N 8 1 "O4'" C DA 7 ? ? "C1'" C DA 7 ? ? N9 C DA 7 ? ? 113.06 108.30 4.76 0.30 N 9 1 "O4'" C DT 8 ? ? "C1'" C DT 8 ? ? N1 C DT 8 ? ? 110.34 108.30 2.04 0.30 N 10 1 "O3'" C DT 8 ? ? P C DG 9 ? ? "O5'" C DG 9 ? ? 84.13 104.00 -19.87 1.90 Y 11 1 "O3'" C DT 8 ? ? P C DG 9 ? ? OP2 C DG 9 ? ? 85.92 105.20 -19.28 2.20 Y 12 1 "O3'" C DT 8 ? ? P C DG 9 ? ? OP1 C DG 9 ? ? 88.20 105.20 -17.00 2.20 Y 13 1 C5 C DG 9 ? ? C6 C DG 9 ? ? O6 C DG 9 ? ? 123.81 128.60 -4.79 0.60 N 14 1 C5 C DG 10 ? ? C6 C DG 10 ? ? O6 C DG 10 ? ? 124.07 128.60 -4.53 0.60 N 15 1 C4 C DG 11 ? ? C5 C DG 11 ? ? N7 C DG 11 ? ? 113.82 110.80 3.02 0.40 N 16 1 C5 C DG 11 ? ? C6 C DG 11 ? ? O6 C DG 11 ? ? 123.77 128.60 -4.83 0.60 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 157 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -96.58 _pdbx_validate_torsion.psi -62.56 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 88 ? A GLY 1 2 1 Y 1 A PRO 89 ? A PRO 2 3 1 Y 1 A HIS 90 ? A HIS 3 4 1 Y 1 A MET 91 ? A MET 4 5 1 Y 1 A THR 92 ? A THR 5 6 1 Y 1 A THR 272 ? A THR 185 7 1 Y 1 A ILE 273 ? A ILE 186 8 1 Y 1 A ARG 274 ? A ARG 187 9 1 Y 1 A ILE 275 ? A ILE 188 10 1 Y 1 A PRO 276 ? A PRO 189 11 1 Y 1 A VAL 277 ? A VAL 190 12 1 Y 1 A HIS 278 ? A HIS 191 13 1 Y 1 A MET 279 ? A MET 192 14 1 Y 1 A VAL 280 ? A VAL 193 15 1 Y 1 A GLU 281 ? A GLU 194 16 1 Y 1 A THR 282 ? A THR 195 17 1 Y 1 A ILE 283 ? A ILE 196 18 1 Y 1 A ASN 284 ? A ASN 197 19 1 Y 1 A LYS 285 ? A LYS 198 20 1 Y 1 A LEU 286 ? A LEU 199 21 1 Y 1 A SER 287 ? A SER 200 22 1 Y 1 A ARG 288 ? A ARG 201 23 1 Y 1 A THR 289 ? A THR 202 24 1 Y 1 A ALA 290 ? A ALA 203 25 1 Y 1 A ARG 291 ? A ARG 204 26 1 Y 1 A GLN 292 ? A GLN 205 27 1 Y 1 A LEU 293 ? A LEU 206 28 1 Y 1 A GLN 294 ? A GLN 207 29 1 Y 1 A GLN 295 ? A GLN 208 30 1 Y 1 A GLU 296 ? A GLU 209 31 1 Y 1 A LEU 297 ? A LEU 210 32 1 Y 1 A GLY 298 ? A GLY 211 33 1 Y 1 A ARG 299 ? A ARG 212 34 1 Y 1 A GLU 300 ? A GLU 213 35 1 Y 1 A PRO 301 ? A PRO 214 36 1 Y 1 A SER 302 ? A SER 215 37 1 Y 1 A TYR 303 ? A TYR 216 38 1 Y 1 A GLU 304 ? A GLU 217 39 1 Y 1 A GLU 305 ? A GLU 218 40 1 Y 1 A ILE 306 ? A ILE 219 41 1 Y 1 A ALA 307 ? A ALA 220 42 1 Y 1 A GLU 308 ? A GLU 221 43 1 Y 1 A ALA 309 ? A ALA 222 44 1 Y 1 A MET 310 ? A MET 223 45 1 Y 1 A GLY 311 ? A GLY 224 46 1 Y 1 A PRO 312 ? A PRO 225 47 1 Y 1 A GLY 313 ? A GLY 226 48 1 Y 1 A TRP 314 ? A TRP 227 49 1 Y 1 A ASP 315 ? A ASP 228 50 1 Y 1 A ALA 316 ? A ALA 229 51 1 Y 1 A LYS 317 ? A LYS 230 52 1 Y 1 A ARG 318 ? A ARG 231 53 1 Y 1 A VAL 319 ? A VAL 232 54 1 Y 1 A GLU 320 ? A GLU 233 55 1 Y 1 A GLU 321 ? A GLU 234 56 1 Y 1 A THR 322 ? A THR 235 57 1 Y 1 A LEU 323 ? A LEU 236 58 1 Y 1 A LYS 324 ? A LYS 237 59 1 Y 1 A ILE 325 ? A ILE 238 60 1 Y 1 A ALA 326 ? A ALA 239 61 1 Y 1 A GLN 327 ? A GLN 240 62 1 Y 1 A GLU 328 ? A GLU 241 63 1 Y 1 A PRO 329 ? A PRO 242 64 1 Y 1 A VAL 330 ? A VAL 243 65 1 Y 1 A SER 331 ? A SER 244 66 1 Y 1 A LEU 332 ? A LEU 245 67 1 Y 1 B DT 1 ? B DT 1 68 1 Y 1 C DT 1 ? C DT 1 69 1 Y 1 C DG 2 ? C DG 2 70 1 Y 1 C DT 3 ? C DT 3 71 1 Y 1 C DA 4 ? C DA 4 72 1 Y 1 C DT 5 ? C DT 5 73 1 Y 1 C DA 6 ? C DA 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DG OP3 O N N 110 DG P P N N 111 DG OP1 O N N 112 DG OP2 O N N 113 DG "O5'" O N N 114 DG "C5'" C N N 115 DG "C4'" C N R 116 DG "O4'" O N N 117 DG "C3'" C N S 118 DG "O3'" O N N 119 DG "C2'" C N N 120 DG "C1'" C N R 121 DG N9 N Y N 122 DG C8 C Y N 123 DG N7 N Y N 124 DG C5 C Y N 125 DG C6 C N N 126 DG O6 O N N 127 DG N1 N N N 128 DG C2 C N N 129 DG N2 N N N 130 DG N3 N N N 131 DG C4 C Y N 132 DG HOP3 H N N 133 DG HOP2 H N N 134 DG "H5'" H N N 135 DG "H5''" H N N 136 DG "H4'" H N N 137 DG "H3'" H N N 138 DG "HO3'" H N N 139 DG "H2'" H N N 140 DG "H2''" H N N 141 DG "H1'" H N N 142 DG H8 H N N 143 DG H1 H N N 144 DG H21 H N N 145 DG H22 H N N 146 DT OP3 O N N 147 DT P P N N 148 DT OP1 O N N 149 DT OP2 O N N 150 DT "O5'" O N N 151 DT "C5'" C N N 152 DT "C4'" C N R 153 DT "O4'" O N N 154 DT "C3'" C N S 155 DT "O3'" O N N 156 DT "C2'" C N N 157 DT "C1'" C N R 158 DT N1 N N N 159 DT C2 C N N 160 DT O2 O N N 161 DT N3 N N N 162 DT C4 C N N 163 DT O4 O N N 164 DT C5 C N N 165 DT C7 C N N 166 DT C6 C N N 167 DT HOP3 H N N 168 DT HOP2 H N N 169 DT "H5'" H N N 170 DT "H5''" H N N 171 DT "H4'" H N N 172 DT "H3'" H N N 173 DT "HO3'" H N N 174 DT "H2'" H N N 175 DT "H2''" H N N 176 DT "H1'" H N N 177 DT H3 H N N 178 DT H71 H N N 179 DT H72 H N N 180 DT H73 H N N 181 DT H6 H N N 182 GLN N N N N 183 GLN CA C N S 184 GLN C C N N 185 GLN O O N N 186 GLN CB C N N 187 GLN CG C N N 188 GLN CD C N N 189 GLN OE1 O N N 190 GLN NE2 N N N 191 GLN OXT O N N 192 GLN H H N N 193 GLN H2 H N N 194 GLN HA H N N 195 GLN HB2 H N N 196 GLN HB3 H N N 197 GLN HG2 H N N 198 GLN HG3 H N N 199 GLN HE21 H N N 200 GLN HE22 H N N 201 GLN HXT H N N 202 GLU N N N N 203 GLU CA C N S 204 GLU C C N N 205 GLU O O N N 206 GLU CB C N N 207 GLU CG C N N 208 GLU CD C N N 209 GLU OE1 O N N 210 GLU OE2 O N N 211 GLU OXT O N N 212 GLU H H N N 213 GLU H2 H N N 214 GLU HA H N N 215 GLU HB2 H N N 216 GLU HB3 H N N 217 GLU HG2 H N N 218 GLU HG3 H N N 219 GLU HE2 H N N 220 GLU HXT H N N 221 GLY N N N N 222 GLY CA C N N 223 GLY C C N N 224 GLY O O N N 225 GLY OXT O N N 226 GLY H H N N 227 GLY H2 H N N 228 GLY HA2 H N N 229 GLY HA3 H N N 230 GLY HXT H N N 231 HIS N N N N 232 HIS CA C N S 233 HIS C C N N 234 HIS O O N N 235 HIS CB C N N 236 HIS CG C Y N 237 HIS ND1 N Y N 238 HIS CD2 C Y N 239 HIS CE1 C Y N 240 HIS NE2 N Y N 241 HIS OXT O N N 242 HIS H H N N 243 HIS H2 H N N 244 HIS HA H N N 245 HIS HB2 H N N 246 HIS HB3 H N N 247 HIS HD1 H N N 248 HIS HD2 H N N 249 HIS HE1 H N N 250 HIS HE2 H N N 251 HIS HXT H N N 252 HOH O O N N 253 HOH H1 H N N 254 HOH H2 H N N 255 ILE N N N N 256 ILE CA C N S 257 ILE C C N N 258 ILE O O N N 259 ILE CB C N S 260 ILE CG1 C N N 261 ILE CG2 C N N 262 ILE CD1 C N N 263 ILE OXT O N N 264 ILE H H N N 265 ILE H2 H N N 266 ILE HA H N N 267 ILE HB H N N 268 ILE HG12 H N N 269 ILE HG13 H N N 270 ILE HG21 H N N 271 ILE HG22 H N N 272 ILE HG23 H N N 273 ILE HD11 H N N 274 ILE HD12 H N N 275 ILE HD13 H N N 276 ILE HXT H N N 277 K K K N N 278 LEU N N N N 279 LEU CA C N S 280 LEU C C N N 281 LEU O O N N 282 LEU CB C N N 283 LEU CG C N N 284 LEU CD1 C N N 285 LEU CD2 C N N 286 LEU OXT O N N 287 LEU H H N N 288 LEU H2 H N N 289 LEU HA H N N 290 LEU HB2 H N N 291 LEU HB3 H N N 292 LEU HG H N N 293 LEU HD11 H N N 294 LEU HD12 H N N 295 LEU HD13 H N N 296 LEU HD21 H N N 297 LEU HD22 H N N 298 LEU HD23 H N N 299 LEU HXT H N N 300 LYS N N N N 301 LYS CA C N S 302 LYS C C N N 303 LYS O O N N 304 LYS CB C N N 305 LYS CG C N N 306 LYS CD C N N 307 LYS CE C N N 308 LYS NZ N N N 309 LYS OXT O N N 310 LYS H H N N 311 LYS H2 H N N 312 LYS HA H N N 313 LYS HB2 H N N 314 LYS HB3 H N N 315 LYS HG2 H N N 316 LYS HG3 H N N 317 LYS HD2 H N N 318 LYS HD3 H N N 319 LYS HE2 H N N 320 LYS HE3 H N N 321 LYS HZ1 H N N 322 LYS HZ2 H N N 323 LYS HZ3 H N N 324 LYS HXT H N N 325 MET N N N N 326 MET CA C N S 327 MET C C N N 328 MET O O N N 329 MET CB C N N 330 MET CG C N N 331 MET SD S N N 332 MET CE C N N 333 MET OXT O N N 334 MET H H N N 335 MET H2 H N N 336 MET HA H N N 337 MET HB2 H N N 338 MET HB3 H N N 339 MET HG2 H N N 340 MET HG3 H N N 341 MET HE1 H N N 342 MET HE2 H N N 343 MET HE3 H N N 344 MET HXT H N N 345 PHE N N N N 346 PHE CA C N S 347 PHE C C N N 348 PHE O O N N 349 PHE CB C N N 350 PHE CG C Y N 351 PHE CD1 C Y N 352 PHE CD2 C Y N 353 PHE CE1 C Y N 354 PHE CE2 C Y N 355 PHE CZ C Y N 356 PHE OXT O N N 357 PHE H H N N 358 PHE H2 H N N 359 PHE HA H N N 360 PHE HB2 H N N 361 PHE HB3 H N N 362 PHE HD1 H N N 363 PHE HD2 H N N 364 PHE HE1 H N N 365 PHE HE2 H N N 366 PHE HZ H N N 367 PHE HXT H N N 368 PRO N N N N 369 PRO CA C N S 370 PRO C C N N 371 PRO O O N N 372 PRO CB C N N 373 PRO CG C N N 374 PRO CD C N N 375 PRO OXT O N N 376 PRO H H N N 377 PRO HA H N N 378 PRO HB2 H N N 379 PRO HB3 H N N 380 PRO HG2 H N N 381 PRO HG3 H N N 382 PRO HD2 H N N 383 PRO HD3 H N N 384 PRO HXT H N N 385 SER N N N N 386 SER CA C N S 387 SER C C N N 388 SER O O N N 389 SER CB C N N 390 SER OG O N N 391 SER OXT O N N 392 SER H H N N 393 SER H2 H N N 394 SER HA H N N 395 SER HB2 H N N 396 SER HB3 H N N 397 SER HG H N N 398 SER HXT H N N 399 THR N N N N 400 THR CA C N S 401 THR C C N N 402 THR O O N N 403 THR CB C N R 404 THR OG1 O N N 405 THR CG2 C N N 406 THR OXT O N N 407 THR H H N N 408 THR H2 H N N 409 THR HA H N N 410 THR HB H N N 411 THR HG1 H N N 412 THR HG21 H N N 413 THR HG22 H N N 414 THR HG23 H N N 415 THR HXT H N N 416 TRP N N N N 417 TRP CA C N S 418 TRP C C N N 419 TRP O O N N 420 TRP CB C N N 421 TRP CG C Y N 422 TRP CD1 C Y N 423 TRP CD2 C Y N 424 TRP NE1 N Y N 425 TRP CE2 C Y N 426 TRP CE3 C Y N 427 TRP CZ2 C Y N 428 TRP CZ3 C Y N 429 TRP CH2 C Y N 430 TRP OXT O N N 431 TRP H H N N 432 TRP H2 H N N 433 TRP HA H N N 434 TRP HB2 H N N 435 TRP HB3 H N N 436 TRP HD1 H N N 437 TRP HE1 H N N 438 TRP HE3 H N N 439 TRP HZ2 H N N 440 TRP HZ3 H N N 441 TRP HH2 H N N 442 TRP HXT H N N 443 TYR N N N N 444 TYR CA C N S 445 TYR C C N N 446 TYR O O N N 447 TYR CB C N N 448 TYR CG C Y N 449 TYR CD1 C Y N 450 TYR CD2 C Y N 451 TYR CE1 C Y N 452 TYR CE2 C Y N 453 TYR CZ C Y N 454 TYR OH O N N 455 TYR OXT O N N 456 TYR H H N N 457 TYR H2 H N N 458 TYR HA H N N 459 TYR HB2 H N N 460 TYR HB3 H N N 461 TYR HD1 H N N 462 TYR HD2 H N N 463 TYR HE1 H N N 464 TYR HE2 H N N 465 TYR HH H N N 466 TYR HXT H N N 467 VAL N N N N 468 VAL CA C N S 469 VAL C C N N 470 VAL O O N N 471 VAL CB C N N 472 VAL CG1 C N N 473 VAL CG2 C N N 474 VAL OXT O N N 475 VAL H H N N 476 VAL H2 H N N 477 VAL HA H N N 478 VAL HB H N N 479 VAL HG11 H N N 480 VAL HG12 H N N 481 VAL HG13 H N N 482 VAL HG21 H N N 483 VAL HG22 H N N 484 VAL HG23 H N N 485 VAL HXT H N N 486 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DG OP3 P sing N N 108 DG OP3 HOP3 sing N N 109 DG P OP1 doub N N 110 DG P OP2 sing N N 111 DG P "O5'" sing N N 112 DG OP2 HOP2 sing N N 113 DG "O5'" "C5'" sing N N 114 DG "C5'" "C4'" sing N N 115 DG "C5'" "H5'" sing N N 116 DG "C5'" "H5''" sing N N 117 DG "C4'" "O4'" sing N N 118 DG "C4'" "C3'" sing N N 119 DG "C4'" "H4'" sing N N 120 DG "O4'" "C1'" sing N N 121 DG "C3'" "O3'" sing N N 122 DG "C3'" "C2'" sing N N 123 DG "C3'" "H3'" sing N N 124 DG "O3'" "HO3'" sing N N 125 DG "C2'" "C1'" sing N N 126 DG "C2'" "H2'" sing N N 127 DG "C2'" "H2''" sing N N 128 DG "C1'" N9 sing N N 129 DG "C1'" "H1'" sing N N 130 DG N9 C8 sing Y N 131 DG N9 C4 sing Y N 132 DG C8 N7 doub Y N 133 DG C8 H8 sing N N 134 DG N7 C5 sing Y N 135 DG C5 C6 sing N N 136 DG C5 C4 doub Y N 137 DG C6 O6 doub N N 138 DG C6 N1 sing N N 139 DG N1 C2 sing N N 140 DG N1 H1 sing N N 141 DG C2 N2 sing N N 142 DG C2 N3 doub N N 143 DG N2 H21 sing N N 144 DG N2 H22 sing N N 145 DG N3 C4 sing N N 146 DT OP3 P sing N N 147 DT OP3 HOP3 sing N N 148 DT P OP1 doub N N 149 DT P OP2 sing N N 150 DT P "O5'" sing N N 151 DT OP2 HOP2 sing N N 152 DT "O5'" "C5'" sing N N 153 DT "C5'" "C4'" sing N N 154 DT "C5'" "H5'" sing N N 155 DT "C5'" "H5''" sing N N 156 DT "C4'" "O4'" sing N N 157 DT "C4'" "C3'" sing N N 158 DT "C4'" "H4'" sing N N 159 DT "O4'" "C1'" sing N N 160 DT "C3'" "O3'" sing N N 161 DT "C3'" "C2'" sing N N 162 DT "C3'" "H3'" sing N N 163 DT "O3'" "HO3'" sing N N 164 DT "C2'" "C1'" sing N N 165 DT "C2'" "H2'" sing N N 166 DT "C2'" "H2''" sing N N 167 DT "C1'" N1 sing N N 168 DT "C1'" "H1'" sing N N 169 DT N1 C2 sing N N 170 DT N1 C6 sing N N 171 DT C2 O2 doub N N 172 DT C2 N3 sing N N 173 DT N3 C4 sing N N 174 DT N3 H3 sing N N 175 DT C4 O4 doub N N 176 DT C4 C5 sing N N 177 DT C5 C7 sing N N 178 DT C5 C6 doub N N 179 DT C7 H71 sing N N 180 DT C7 H72 sing N N 181 DT C7 H73 sing N N 182 DT C6 H6 sing N N 183 GLN N CA sing N N 184 GLN N H sing N N 185 GLN N H2 sing N N 186 GLN CA C sing N N 187 GLN CA CB sing N N 188 GLN CA HA sing N N 189 GLN C O doub N N 190 GLN C OXT sing N N 191 GLN CB CG sing N N 192 GLN CB HB2 sing N N 193 GLN CB HB3 sing N N 194 GLN CG CD sing N N 195 GLN CG HG2 sing N N 196 GLN CG HG3 sing N N 197 GLN CD OE1 doub N N 198 GLN CD NE2 sing N N 199 GLN NE2 HE21 sing N N 200 GLN NE2 HE22 sing N N 201 GLN OXT HXT sing N N 202 GLU N CA sing N N 203 GLU N H sing N N 204 GLU N H2 sing N N 205 GLU CA C sing N N 206 GLU CA CB sing N N 207 GLU CA HA sing N N 208 GLU C O doub N N 209 GLU C OXT sing N N 210 GLU CB CG sing N N 211 GLU CB HB2 sing N N 212 GLU CB HB3 sing N N 213 GLU CG CD sing N N 214 GLU CG HG2 sing N N 215 GLU CG HG3 sing N N 216 GLU CD OE1 doub N N 217 GLU CD OE2 sing N N 218 GLU OE2 HE2 sing N N 219 GLU OXT HXT sing N N 220 GLY N CA sing N N 221 GLY N H sing N N 222 GLY N H2 sing N N 223 GLY CA C sing N N 224 GLY CA HA2 sing N N 225 GLY CA HA3 sing N N 226 GLY C O doub N N 227 GLY C OXT sing N N 228 GLY OXT HXT sing N N 229 HIS N CA sing N N 230 HIS N H sing N N 231 HIS N H2 sing N N 232 HIS CA C sing N N 233 HIS CA CB sing N N 234 HIS CA HA sing N N 235 HIS C O doub N N 236 HIS C OXT sing N N 237 HIS CB CG sing N N 238 HIS CB HB2 sing N N 239 HIS CB HB3 sing N N 240 HIS CG ND1 sing Y N 241 HIS CG CD2 doub Y N 242 HIS ND1 CE1 doub Y N 243 HIS ND1 HD1 sing N N 244 HIS CD2 NE2 sing Y N 245 HIS CD2 HD2 sing N N 246 HIS CE1 NE2 sing Y N 247 HIS CE1 HE1 sing N N 248 HIS NE2 HE2 sing N N 249 HIS OXT HXT sing N N 250 HOH O H1 sing N N 251 HOH O H2 sing N N 252 ILE N CA sing N N 253 ILE N H sing N N 254 ILE N H2 sing N N 255 ILE CA C sing N N 256 ILE CA CB sing N N 257 ILE CA HA sing N N 258 ILE C O doub N N 259 ILE C OXT sing N N 260 ILE CB CG1 sing N N 261 ILE CB CG2 sing N N 262 ILE CB HB sing N N 263 ILE CG1 CD1 sing N N 264 ILE CG1 HG12 sing N N 265 ILE CG1 HG13 sing N N 266 ILE CG2 HG21 sing N N 267 ILE CG2 HG22 sing N N 268 ILE CG2 HG23 sing N N 269 ILE CD1 HD11 sing N N 270 ILE CD1 HD12 sing N N 271 ILE CD1 HD13 sing N N 272 ILE OXT HXT sing N N 273 LEU N CA sing N N 274 LEU N H sing N N 275 LEU N H2 sing N N 276 LEU CA C sing N N 277 LEU CA CB sing N N 278 LEU CA HA sing N N 279 LEU C O doub N N 280 LEU C OXT sing N N 281 LEU CB CG sing N N 282 LEU CB HB2 sing N N 283 LEU CB HB3 sing N N 284 LEU CG CD1 sing N N 285 LEU CG CD2 sing N N 286 LEU CG HG sing N N 287 LEU CD1 HD11 sing N N 288 LEU CD1 HD12 sing N N 289 LEU CD1 HD13 sing N N 290 LEU CD2 HD21 sing N N 291 LEU CD2 HD22 sing N N 292 LEU CD2 HD23 sing N N 293 LEU OXT HXT sing N N 294 LYS N CA sing N N 295 LYS N H sing N N 296 LYS N H2 sing N N 297 LYS CA C sing N N 298 LYS CA CB sing N N 299 LYS CA HA sing N N 300 LYS C O doub N N 301 LYS C OXT sing N N 302 LYS CB CG sing N N 303 LYS CB HB2 sing N N 304 LYS CB HB3 sing N N 305 LYS CG CD sing N N 306 LYS CG HG2 sing N N 307 LYS CG HG3 sing N N 308 LYS CD CE sing N N 309 LYS CD HD2 sing N N 310 LYS CD HD3 sing N N 311 LYS CE NZ sing N N 312 LYS CE HE2 sing N N 313 LYS CE HE3 sing N N 314 LYS NZ HZ1 sing N N 315 LYS NZ HZ2 sing N N 316 LYS NZ HZ3 sing N N 317 LYS OXT HXT sing N N 318 MET N CA sing N N 319 MET N H sing N N 320 MET N H2 sing N N 321 MET CA C sing N N 322 MET CA CB sing N N 323 MET CA HA sing N N 324 MET C O doub N N 325 MET C OXT sing N N 326 MET CB CG sing N N 327 MET CB HB2 sing N N 328 MET CB HB3 sing N N 329 MET CG SD sing N N 330 MET CG HG2 sing N N 331 MET CG HG3 sing N N 332 MET SD CE sing N N 333 MET CE HE1 sing N N 334 MET CE HE2 sing N N 335 MET CE HE3 sing N N 336 MET OXT HXT sing N N 337 PHE N CA sing N N 338 PHE N H sing N N 339 PHE N H2 sing N N 340 PHE CA C sing N N 341 PHE CA CB sing N N 342 PHE CA HA sing N N 343 PHE C O doub N N 344 PHE C OXT sing N N 345 PHE CB CG sing N N 346 PHE CB HB2 sing N N 347 PHE CB HB3 sing N N 348 PHE CG CD1 doub Y N 349 PHE CG CD2 sing Y N 350 PHE CD1 CE1 sing Y N 351 PHE CD1 HD1 sing N N 352 PHE CD2 CE2 doub Y N 353 PHE CD2 HD2 sing N N 354 PHE CE1 CZ doub Y N 355 PHE CE1 HE1 sing N N 356 PHE CE2 CZ sing Y N 357 PHE CE2 HE2 sing N N 358 PHE CZ HZ sing N N 359 PHE OXT HXT sing N N 360 PRO N CA sing N N 361 PRO N CD sing N N 362 PRO N H sing N N 363 PRO CA C sing N N 364 PRO CA CB sing N N 365 PRO CA HA sing N N 366 PRO C O doub N N 367 PRO C OXT sing N N 368 PRO CB CG sing N N 369 PRO CB HB2 sing N N 370 PRO CB HB3 sing N N 371 PRO CG CD sing N N 372 PRO CG HG2 sing N N 373 PRO CG HG3 sing N N 374 PRO CD HD2 sing N N 375 PRO CD HD3 sing N N 376 PRO OXT HXT sing N N 377 SER N CA sing N N 378 SER N H sing N N 379 SER N H2 sing N N 380 SER CA C sing N N 381 SER CA CB sing N N 382 SER CA HA sing N N 383 SER C O doub N N 384 SER C OXT sing N N 385 SER CB OG sing N N 386 SER CB HB2 sing N N 387 SER CB HB3 sing N N 388 SER OG HG sing N N 389 SER OXT HXT sing N N 390 THR N CA sing N N 391 THR N H sing N N 392 THR N H2 sing N N 393 THR CA C sing N N 394 THR CA CB sing N N 395 THR CA HA sing N N 396 THR C O doub N N 397 THR C OXT sing N N 398 THR CB OG1 sing N N 399 THR CB CG2 sing N N 400 THR CB HB sing N N 401 THR OG1 HG1 sing N N 402 THR CG2 HG21 sing N N 403 THR CG2 HG22 sing N N 404 THR CG2 HG23 sing N N 405 THR OXT HXT sing N N 406 TRP N CA sing N N 407 TRP N H sing N N 408 TRP N H2 sing N N 409 TRP CA C sing N N 410 TRP CA CB sing N N 411 TRP CA HA sing N N 412 TRP C O doub N N 413 TRP C OXT sing N N 414 TRP CB CG sing N N 415 TRP CB HB2 sing N N 416 TRP CB HB3 sing N N 417 TRP CG CD1 doub Y N 418 TRP CG CD2 sing Y N 419 TRP CD1 NE1 sing Y N 420 TRP CD1 HD1 sing N N 421 TRP CD2 CE2 doub Y N 422 TRP CD2 CE3 sing Y N 423 TRP NE1 CE2 sing Y N 424 TRP NE1 HE1 sing N N 425 TRP CE2 CZ2 sing Y N 426 TRP CE3 CZ3 doub Y N 427 TRP CE3 HE3 sing N N 428 TRP CZ2 CH2 doub Y N 429 TRP CZ2 HZ2 sing N N 430 TRP CZ3 CH2 sing Y N 431 TRP CZ3 HZ3 sing N N 432 TRP CH2 HH2 sing N N 433 TRP OXT HXT sing N N 434 TYR N CA sing N N 435 TYR N H sing N N 436 TYR N H2 sing N N 437 TYR CA C sing N N 438 TYR CA CB sing N N 439 TYR CA HA sing N N 440 TYR C O doub N N 441 TYR C OXT sing N N 442 TYR CB CG sing N N 443 TYR CB HB2 sing N N 444 TYR CB HB3 sing N N 445 TYR CG CD1 doub Y N 446 TYR CG CD2 sing Y N 447 TYR CD1 CE1 sing Y N 448 TYR CD1 HD1 sing N N 449 TYR CD2 CE2 doub Y N 450 TYR CD2 HD2 sing N N 451 TYR CE1 CZ doub Y N 452 TYR CE1 HE1 sing N N 453 TYR CE2 CZ sing Y N 454 TYR CE2 HE2 sing N N 455 TYR CZ OH sing N N 456 TYR OH HH sing N N 457 TYR OXT HXT sing N N 458 VAL N CA sing N N 459 VAL N H sing N N 460 VAL N H2 sing N N 461 VAL CA C sing N N 462 VAL CA CB sing N N 463 VAL CA HA sing N N 464 VAL C O doub N N 465 VAL C OXT sing N N 466 VAL CB CG1 sing N N 467 VAL CB CG2 sing N N 468 VAL CB HB sing N N 469 VAL CG1 HG11 sing N N 470 VAL CG1 HG12 sing N N 471 VAL CG1 HG13 sing N N 472 VAL CG2 HG21 sing N N 473 VAL CG2 HG22 sing N N 474 VAL CG2 HG23 sing N N 475 VAL OXT HXT sing N N 476 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'POTASSIUM ION' K 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KU2 _pdbx_initial_refinement_model.details 'PDB ENTRY 1KU2' #