data_3UPQ # _entry.id 3UPQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3UPQ pdb_00003upq 10.2210/pdb3upq/pdb NDB NA1388 ? ? RCSB RCSB069054 ? ? WWPDB D_1000069054 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3MGH . unspecified PDB 3MGI . unspecified PDB 3UQ0 . unspecified PDB 3UQ1 . unspecified PDB 3UQ2 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3UPQ _pdbx_database_status.recvd_initial_deposition_date 2011-11-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gosavi, R.A.' 1 'Moon, A.F.' 2 'Kunkel, T.A.' 3 'Pedersen, L.C.' 4 'Bebenek, K.' 5 # _citation.id primary _citation.title 'The catalytic cycle for ribonucleotide incorporation by human DNA Pol lambda' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 40 _citation.page_first 7518 _citation.page_last 7527 _citation.year 2012 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22584622 _citation.pdbx_database_id_DOI 10.1093/nar/gks413 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gosavi, R.A.' 1 ? primary 'Moon, A.F.' 2 ? primary 'Kunkel, T.A.' 3 ? primary 'Pedersen, L.C.' 4 ? primary 'Bebenek, K.' 5 ? # _cell.entry_id 3UPQ _cell.length_a 55.975 _cell.length_b 63.660 _cell.length_c 139.970 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3UPQ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase lambda' 36736.039 1 '2.7.7.7, 4.2.99.-' 'SQEENGQQQ to KGET' 'Loop mutant of DNA polymerase lambda' ? 2 polymer syn "5'-D(*CP*GP*GP*CP*TP*GP*TP*AP*CP*TP*G)-3'" 3365.196 1 ? ? ? ? 3 polymer syn "5'-D(*CP*AP*GP*TP*AP*C)-3'" 1793.219 1 ? ? ? ? 4 polymer syn "5'-D(P*GP*CP*CP*G)-3'" 1191.818 1 ? ? ? ? 5 non-polymer syn "5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine" 506.196 1 ? ? ? ? 6 non-polymer syn 'MANGANESE (II) ION' 54.938 3 ? ? ? ? 7 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 8 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 9 water nat water 18.015 255 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pol Lambda, DNA polymerase beta-2, Pol beta2, DNA polymerase kappa' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGH LRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQK AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVKGETKYLGVCRLPGPGRRH RRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLP YREPAERDW ; ;AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGH LRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQK AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVKGETKYLGVCRLPGPGRRH RRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLP YREPAERDW ; A ? 2 polydeoxyribonucleotide no no '(DC)(DG)(DG)(DC)(DT)(DG)(DT)(DA)(DC)(DT)(DG)' CGGCTGTACTG T ? 3 polydeoxyribonucleotide no no '(DC)(DA)(DG)(DT)(DA)(DC)' CAGTAC P ? 4 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DG)' GCCG D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLN n 1 3 PRO n 1 4 SER n 1 5 SER n 1 6 GLN n 1 7 LYS n 1 8 ALA n 1 9 THR n 1 10 ASN n 1 11 HIS n 1 12 ASN n 1 13 LEU n 1 14 HIS n 1 15 ILE n 1 16 THR n 1 17 GLU n 1 18 LYS n 1 19 LEU n 1 20 GLU n 1 21 VAL n 1 22 LEU n 1 23 ALA n 1 24 LYS n 1 25 ALA n 1 26 TYR n 1 27 SER n 1 28 VAL n 1 29 GLN n 1 30 GLY n 1 31 ASP n 1 32 LYS n 1 33 TRP n 1 34 ARG n 1 35 ALA n 1 36 LEU n 1 37 GLY n 1 38 TYR n 1 39 ALA n 1 40 LYS n 1 41 ALA n 1 42 ILE n 1 43 ASN n 1 44 ALA n 1 45 LEU n 1 46 LYS n 1 47 SER n 1 48 PHE n 1 49 HIS n 1 50 LYS n 1 51 PRO n 1 52 VAL n 1 53 THR n 1 54 SER n 1 55 TYR n 1 56 GLN n 1 57 GLU n 1 58 ALA n 1 59 CYS n 1 60 SER n 1 61 ILE n 1 62 PRO n 1 63 GLY n 1 64 ILE n 1 65 GLY n 1 66 LYS n 1 67 ARG n 1 68 MET n 1 69 ALA n 1 70 GLU n 1 71 LYS n 1 72 ILE n 1 73 ILE n 1 74 GLU n 1 75 ILE n 1 76 LEU n 1 77 GLU n 1 78 SER n 1 79 GLY n 1 80 HIS n 1 81 LEU n 1 82 ARG n 1 83 LYS n 1 84 LEU n 1 85 ASP n 1 86 HIS n 1 87 ILE n 1 88 SER n 1 89 GLU n 1 90 SER n 1 91 VAL n 1 92 PRO n 1 93 VAL n 1 94 LEU n 1 95 GLU n 1 96 LEU n 1 97 PHE n 1 98 SER n 1 99 ASN n 1 100 ILE n 1 101 TRP n 1 102 GLY n 1 103 ALA n 1 104 GLY n 1 105 THR n 1 106 LYS n 1 107 THR n 1 108 ALA n 1 109 GLN n 1 110 MET n 1 111 TRP n 1 112 TYR n 1 113 GLN n 1 114 GLN n 1 115 GLY n 1 116 PHE n 1 117 ARG n 1 118 SER n 1 119 LEU n 1 120 GLU n 1 121 ASP n 1 122 ILE n 1 123 ARG n 1 124 SER n 1 125 GLN n 1 126 ALA n 1 127 SER n 1 128 LEU n 1 129 THR n 1 130 THR n 1 131 GLN n 1 132 GLN n 1 133 ALA n 1 134 ILE n 1 135 GLY n 1 136 LEU n 1 137 LYS n 1 138 HIS n 1 139 TYR n 1 140 SER n 1 141 ASP n 1 142 PHE n 1 143 LEU n 1 144 GLU n 1 145 ARG n 1 146 MET n 1 147 PRO n 1 148 ARG n 1 149 GLU n 1 150 GLU n 1 151 ALA n 1 152 THR n 1 153 GLU n 1 154 ILE n 1 155 GLU n 1 156 GLN n 1 157 THR n 1 158 VAL n 1 159 GLN n 1 160 LYS n 1 161 ALA n 1 162 ALA n 1 163 GLN n 1 164 ALA n 1 165 PHE n 1 166 ASN n 1 167 SER n 1 168 GLY n 1 169 LEU n 1 170 LEU n 1 171 CYS n 1 172 VAL n 1 173 ALA n 1 174 CYS n 1 175 GLY n 1 176 SER n 1 177 TYR n 1 178 ARG n 1 179 ARG n 1 180 GLY n 1 181 LYS n 1 182 ALA n 1 183 THR n 1 184 CYS n 1 185 GLY n 1 186 ASP n 1 187 VAL n 1 188 ASP n 1 189 VAL n 1 190 LEU n 1 191 ILE n 1 192 THR n 1 193 HIS n 1 194 PRO n 1 195 ASP n 1 196 GLY n 1 197 ARG n 1 198 SER n 1 199 HIS n 1 200 ARG n 1 201 GLY n 1 202 ILE n 1 203 PHE n 1 204 SER n 1 205 ARG n 1 206 LEU n 1 207 LEU n 1 208 ASP n 1 209 SER n 1 210 LEU n 1 211 ARG n 1 212 GLN n 1 213 GLU n 1 214 GLY n 1 215 PHE n 1 216 LEU n 1 217 THR n 1 218 ASP n 1 219 ASP n 1 220 LEU n 1 221 VAL n 1 222 LYS n 1 223 GLY n 1 224 GLU n 1 225 THR n 1 226 LYS n 1 227 TYR n 1 228 LEU n 1 229 GLY n 1 230 VAL n 1 231 CYS n 1 232 ARG n 1 233 LEU n 1 234 PRO n 1 235 GLY n 1 236 PRO n 1 237 GLY n 1 238 ARG n 1 239 ARG n 1 240 HIS n 1 241 ARG n 1 242 ARG n 1 243 LEU n 1 244 ASP n 1 245 ILE n 1 246 ILE n 1 247 VAL n 1 248 VAL n 1 249 PRO n 1 250 TYR n 1 251 SER n 1 252 GLU n 1 253 PHE n 1 254 ALA n 1 255 CYS n 1 256 ALA n 1 257 LEU n 1 258 LEU n 1 259 TYR n 1 260 PHE n 1 261 THR n 1 262 GLY n 1 263 SER n 1 264 ALA n 1 265 HIS n 1 266 PHE n 1 267 ASN n 1 268 ARG n 1 269 SER n 1 270 MET n 1 271 ARG n 1 272 ALA n 1 273 LEU n 1 274 ALA n 1 275 LYS n 1 276 THR n 1 277 LYS n 1 278 GLY n 1 279 MET n 1 280 SER n 1 281 LEU n 1 282 SER n 1 283 GLU n 1 284 HIS n 1 285 ALA n 1 286 LEU n 1 287 SER n 1 288 THR n 1 289 ALA n 1 290 VAL n 1 291 VAL n 1 292 ARG n 1 293 ASN n 1 294 THR n 1 295 HIS n 1 296 GLY n 1 297 CYS n 1 298 LYS n 1 299 VAL n 1 300 GLY n 1 301 PRO n 1 302 GLY n 1 303 ARG n 1 304 VAL n 1 305 LEU n 1 306 PRO n 1 307 THR n 1 308 PRO n 1 309 THR n 1 310 GLU n 1 311 LYS n 1 312 ASP n 1 313 VAL n 1 314 PHE n 1 315 ARG n 1 316 LEU n 1 317 LEU n 1 318 GLY n 1 319 LEU n 1 320 PRO n 1 321 TYR n 1 322 ARG n 1 323 GLU n 1 324 PRO n 1 325 ALA n 1 326 GLU n 1 327 ARG n 1 328 ASP n 1 329 TRP n 2 1 DC n 2 2 DG n 2 3 DG n 2 4 DC n 2 5 DT n 2 6 DG n 2 7 DT n 2 8 DA n 2 9 DC n 2 10 DT n 2 11 DG n 3 1 DC n 3 2 DA n 3 3 DG n 3 4 DT n 3 5 DA n 3 6 DC n 4 1 DG n 4 2 DC n 4 3 DC n 4 4 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLL _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLL_HUMAN Q9UGP5 1 ;AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGH LRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQK AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPG PGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFR LLGLPYREPAERDW ; 242 ? 2 PDB 3UPQ 3UPQ 2 ? ? ? 3 PDB 3UPQ 3UPQ 3 ? ? ? 4 PDB 3UPQ 3UPQ 4 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3UPQ A 1 ? 329 ? Q9UGP5 242 ? 575 ? 242 575 2 2 3UPQ T 1 ? 11 ? 3UPQ 1 ? 11 ? 1 11 3 3 3UPQ P 1 ? 6 ? 3UPQ 1 ? 6 ? 1 6 4 4 3UPQ D 1 ? 4 ? 3UPQ 1 ? 4 ? 1 4 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3UPQ LYS A 222 ? UNP Q9UGP5 SER 463 'SEE REMARK 999' 463 1 1 3UPQ GLY A 223 ? UNP Q9UGP5 GLN 464 'SEE REMARK 999' 464 2 1 3UPQ GLU A 224 ? UNP Q9UGP5 GLN 470 'SEE REMARK 999' 470 3 1 3UPQ THR A 225 ? UNP Q9UGP5 GLN 471 'SEE REMARK 999' 471 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZAN non-polymer . "5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine" ? 'C10 H17 N6 O12 P3' 506.196 # _exptl.entry_id 3UPQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.89 _exptl_crystal.density_percent_sol 57.50 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '100mM Na HEPES pH 7.5, 1.0M lithium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-11-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3UPQ _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.95 _reflns.number_obs 37285 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.058 _reflns.pdbx_netI_over_sigmaI 28.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 1.98 _reflns_shell.percent_possible_all 98.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.357 _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.pdbx_redundancy 4.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3UPQ _refine.ls_number_reflns_obs 36538 _refine.ls_number_reflns_all 37285 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.444 _refine.ls_d_res_high 1.950 _refine.ls_percent_reflns_obs 98.02 _refine.ls_R_factor_obs 0.2094 _refine.ls_R_factor_all 0.209 _refine.ls_R_factor_R_work 0.2076 _refine.ls_R_factor_R_free 0.2437 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.89 _refine.ls_number_reflns_R_free 1787 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -5.8012 _refine.aniso_B[2][2] 5.5762 _refine.aniso_B[3][3] 0.2250 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.331 _refine.solvent_model_param_bsol 42.188 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3MGI' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'Used same free R flags as in PDB ENTRY 3MGI' _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.27 _refine.pdbx_overall_phase_error 22.16 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2289 _refine_hist.pdbx_number_atoms_nucleic_acid 425 _refine_hist.pdbx_number_atoms_ligand 55 _refine_hist.number_atoms_solvent 255 _refine_hist.number_atoms_total 3024 _refine_hist.d_res_high 1.950 _refine_hist.d_res_low 27.444 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.010 ? ? 2912 ? 'X-RAY DIFFRACTION' f_angle_d 1.069 ? ? 4075 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 12.836 ? ? 855 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.062 ? ? 450 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 441 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.9500 2.0027 2437 0.2401 90.00 0.2713 . . 125 . . . . 'X-RAY DIFFRACTION' . 2.0027 2.0616 2545 0.2171 95.00 0.2741 . . 132 . . . . 'X-RAY DIFFRACTION' . 2.0616 2.1281 2611 0.2141 97.00 0.2305 . . 132 . . . . 'X-RAY DIFFRACTION' . 2.1281 2.2042 2617 0.2104 98.00 0.2639 . . 133 . . . . 'X-RAY DIFFRACTION' . 2.2042 2.2924 2624 0.2220 97.00 0.2294 . . 135 . . . . 'X-RAY DIFFRACTION' . 2.2924 2.3966 2647 0.2241 99.00 0.3168 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.3966 2.5229 2693 0.2202 99.00 0.2379 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.5229 2.6809 2699 0.2177 100.00 0.2649 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.6809 2.8876 2700 0.2268 100.00 0.2719 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.8876 3.1779 2723 0.2252 100.00 0.2313 . . 143 . . . . 'X-RAY DIFFRACTION' . 3.1779 3.6368 2761 0.2070 100.00 0.2355 . . 134 . . . . 'X-RAY DIFFRACTION' . 3.6368 4.5785 2775 0.1772 100.00 0.2371 . . 154 . . . . 'X-RAY DIFFRACTION' . 4.5785 27.4470 2919 0.1995 100.00 0.2225 . . 145 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3UPQ _struct.title 'Crystal structure of the pre-catalytic ternary complex of polymerase lambda with an rATP analog opposite a templating T.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3UPQ _struct_keywords.pdbx_keywords 'TRANSFERASE, LYASE/DNA' _struct_keywords.text 'DNA, Polymerase, DNA polymerase lambda, ribonucleotide incorporation, TRANSFERASE, LYASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 7 ? J N N 8 ? K N N 8 ? L N N 8 ? M N N 8 ? N N N 9 ? O N N 9 ? P N N 9 ? Q N N 9 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 14 ? GLN A 29 ? HIS A 255 GLN A 270 1 ? 16 HELX_P HELX_P2 2 ASP A 31 ? LYS A 46 ? ASP A 272 LYS A 287 1 ? 16 HELX_P HELX_P3 3 SER A 54 ? SER A 60 ? SER A 295 SER A 301 1 ? 7 HELX_P HELX_P4 4 GLY A 65 ? GLY A 79 ? GLY A 306 GLY A 320 1 ? 15 HELX_P HELX_P5 5 LEU A 81 ? ILE A 87 ? LEU A 322 ILE A 328 5 ? 7 HELX_P HELX_P6 6 SER A 90 ? ASN A 99 ? SER A 331 ASN A 340 1 ? 10 HELX_P HELX_P7 7 GLY A 104 ? GLN A 114 ? GLY A 345 GLN A 355 1 ? 11 HELX_P HELX_P8 8 SER A 118 ? ALA A 126 ? SER A 359 ALA A 367 1 ? 9 HELX_P HELX_P9 9 THR A 129 ? HIS A 138 ? THR A 370 HIS A 379 1 ? 10 HELX_P HELX_P10 10 HIS A 138 ? GLU A 144 ? HIS A 379 GLU A 385 1 ? 7 HELX_P HELX_P11 11 ARG A 148 ? GLN A 163 ? ARG A 389 GLN A 404 1 ? 16 HELX_P HELX_P12 12 CYS A 174 ? ARG A 179 ? CYS A 415 ARG A 420 1 ? 6 HELX_P HELX_P13 13 ILE A 202 ? GLU A 213 ? ILE A 443 GLU A 454 1 ? 12 HELX_P HELX_P14 14 PRO A 249 ? SER A 251 ? PRO A 495 SER A 497 5 ? 3 HELX_P HELX_P15 15 GLU A 252 ? GLY A 262 ? GLU A 498 GLY A 508 1 ? 11 HELX_P HELX_P16 16 SER A 263 ? LYS A 277 ? SER A 509 LYS A 523 1 ? 15 HELX_P HELX_P17 17 THR A 309 ? LEU A 317 ? THR A 555 LEU A 563 1 ? 9 HELX_P HELX_P18 18 GLU A 323 ? ASP A 328 ? GLU A 569 ASP A 574 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? E ZAN . O1B ? ? ? 1_555 F MN . MN ? ? A ZAN 0 A MN 1 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc2 metalc ? ? E ZAN . O2G ? ? ? 1_555 F MN . MN ? ? A ZAN 0 A MN 1 1_555 ? ? ? ? ? ? ? 2.176 ? ? metalc3 metalc ? ? E ZAN . O1A ? ? ? 1_555 F MN . MN ? ? A ZAN 0 A MN 1 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc4 metalc ? ? E ZAN . O1A ? ? ? 1_555 G MN . MN ? ? A ZAN 0 A MN 2 1_555 ? ? ? ? ? ? ? 2.394 ? ? metalc5 metalc ? ? F MN . MN ? ? ? 1_555 N HOH . O ? ? A MN 1 A HOH 215 1_555 ? ? ? ? ? ? ? 2.289 ? ? metalc6 metalc ? ? F MN . MN ? ? ? 1_555 A ASP 186 OD1 ? ? A MN 1 A ASP 427 1_555 ? ? ? ? ? ? ? 2.090 ? ? metalc7 metalc ? ? F MN . MN ? ? ? 1_555 A ASP 188 OD2 ? ? A MN 1 A ASP 429 1_555 ? ? ? ? ? ? ? 2.171 ? ? metalc8 metalc ? ? G MN . MN ? ? ? 1_555 N HOH . O ? ? A MN 2 A HOH 213 1_555 ? ? ? ? ? ? ? 2.241 ? ? metalc9 metalc ? ? G MN . MN ? ? ? 1_555 A ASP 186 OD2 ? ? A MN 2 A ASP 427 1_555 ? ? ? ? ? ? ? 2.103 ? ? metalc10 metalc ? ? G MN . MN ? ? ? 1_555 A ASP 188 OD1 ? ? A MN 2 A ASP 429 1_555 ? ? ? ? ? ? ? 2.163 ? ? metalc11 metalc ? ? G MN . MN ? ? ? 1_555 A ASP 244 OD2 ? ? A MN 2 A ASP 490 1_555 ? ? ? ? ? ? ? 2.111 ? ? metalc12 metalc ? ? G MN . MN ? ? ? 1_555 C DC 6 "O3'" ? ? A MN 2 P DC 6 1_555 ? ? ? ? ? ? ? 2.325 ? ? metalc13 metalc ? ? H MN . MN ? ? ? 1_555 N HOH . O ? ? A MN 3 A HOH 195 1_555 ? ? ? ? ? ? ? 2.211 ? ? metalc14 metalc ? ? H MN . MN ? ? ? 1_555 N HOH . O ? ? A MN 3 A HOH 196 1_555 ? ? ? ? ? ? ? 2.213 ? ? metalc15 metalc ? ? H MN . MN ? ? ? 1_555 N HOH . O ? ? A MN 3 A HOH 197 1_555 ? ? ? ? ? ? ? 2.184 ? ? metalc16 metalc ? ? H MN . MN ? ? ? 1_555 N HOH . O ? ? A MN 3 A HOH 198 1_555 ? ? ? ? ? ? ? 2.224 ? ? metalc17 metalc ? ? H MN . MN ? ? ? 1_555 A ASP 141 OD2 ? ? A MN 3 A ASP 382 1_555 ? ? ? ? ? ? ? 2.126 ? ? metalc18 metalc ? ? H MN . MN ? ? ? 1_555 A HIS 240 ND1 ? ? A MN 3 A HIS 486 1_555 ? ? ? ? ? ? ? 2.348 ? ? metalc19 metalc ? ? I NA . NA ? ? ? 1_555 A SER 98 O ? ? A NA 4 A SER 339 1_555 ? ? ? ? ? ? ? 2.439 ? ? metalc20 metalc ? ? I NA . NA ? ? ? 1_555 A ILE 100 O ? ? A NA 4 A ILE 341 1_555 ? ? ? ? ? ? ? 2.618 ? ? metalc21 metalc ? ? I NA . NA ? ? ? 1_555 A ALA 103 O ? ? A NA 4 A ALA 344 1_555 ? ? ? ? ? ? ? 2.559 ? ? metalc22 metalc ? ? I NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 4 A HOH 578 1_555 ? ? ? ? ? ? ? 2.412 ? ? metalc23 metalc ? ? I NA . NA ? ? ? 1_555 C DA 5 OP1 ? ? A NA 4 P DA 5 1_555 ? ? ? ? ? ? ? 2.494 ? ? metalc24 metalc ? ? I NA . NA ? ? ? 1_555 P HOH . O ? ? A NA 4 P HOH 50 1_555 ? ? ? ? ? ? ? 2.599 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 D DG 4 N1 ? ? T DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 D DG 4 O6 ? ? T DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 D DG 4 N2 ? ? T DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N1 ? ? ? 1_555 D DC 3 N3 ? ? T DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 N2 ? ? ? 1_555 D DC 3 O2 ? ? T DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 2 O6 ? ? ? 1_555 D DC 3 N4 ? ? T DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N1 ? ? ? 1_555 D DC 2 N3 ? ? T DG 3 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 N2 ? ? ? 1_555 D DC 2 O2 ? ? T DG 3 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 3 O6 ? ? ? 1_555 D DC 2 N4 ? ? T DG 3 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 4 N3 ? ? ? 1_555 D DG 1 N1 ? ? T DC 4 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 4 N4 ? ? ? 1_555 D DG 1 O6 ? ? T DC 4 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 4 O2 ? ? ? 1_555 D DG 1 N2 ? ? T DC 4 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 6 N3 ? ? T DG 6 P DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 6 O2 ? ? T DG 6 P DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 6 N4 ? ? T DG 6 P DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 5 N1 ? ? T DT 7 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 5 N6 ? ? T DT 7 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DA 8 N1 ? ? ? 1_555 C DT 4 N3 ? ? T DA 8 P DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DA 8 N6 ? ? ? 1_555 C DT 4 O4 ? ? T DA 8 P DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 3 N1 ? ? T DC 9 P DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 3 O6 ? ? T DC 9 P DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 3 N2 ? ? T DC 9 P DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 2 N1 ? ? T DT 10 P DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 2 N6 ? ? T DT 10 P DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 1 N3 ? ? T DG 11 P DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 1 O2 ? ? T DG 11 P DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 1 N4 ? ? T DG 11 P DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 262 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 508 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 263 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 509 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 6.41 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 146 ? PRO A 147 ? MET A 387 PRO A 388 A 2 THR A 183 ? CYS A 184 ? THR A 424 CYS A 425 B 1 LEU A 170 ? ALA A 173 ? LEU A 411 ALA A 414 B 2 ASP A 186 ? THR A 192 ? ASP A 427 THR A 433 B 3 ARG A 241 ? VAL A 247 ? ARG A 487 VAL A 493 B 4 LYS A 226 ? CYS A 231 ? LYS A 472 CYS A 477 B 5 LEU A 216 ? LYS A 222 ? LEU A 457 LYS A 463 C 1 MET A 279 ? LEU A 281 ? MET A 525 LEU A 527 C 2 LEU A 286 ? THR A 288 ? LEU A 532 THR A 534 C 3 VAL A 304 ? LEU A 305 ? VAL A 550 LEU A 551 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MET A 146 ? N MET A 387 O CYS A 184 ? O CYS A 425 B 1 2 N VAL A 172 ? N VAL A 413 O LEU A 190 ? O LEU A 431 B 2 3 N VAL A 189 ? N VAL A 430 O ASP A 244 ? O ASP A 490 B 3 4 O ARG A 241 ? O ARG A 487 N CYS A 231 ? N CYS A 477 B 4 5 O LEU A 228 ? O LEU A 474 N VAL A 221 ? N VAL A 462 C 1 2 N SER A 280 ? N SER A 526 O SER A 287 ? O SER A 533 C 2 3 N LEU A 286 ? N LEU A 532 O LEU A 305 ? O LEU A 551 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZAN 0 ? 26 'BINDING SITE FOR RESIDUE ZAN A 0' AC2 Software A MN 1 ? 5 'BINDING SITE FOR RESIDUE MN A 1' AC3 Software A MN 2 ? 7 'BINDING SITE FOR RESIDUE MN A 2' AC4 Software A MN 3 ? 6 'BINDING SITE FOR RESIDUE MN A 3' AC5 Software A NA 4 ? 6 'BINDING SITE FOR RESIDUE NA A 4' AC6 Software A SO4 5 ? 5 'BINDING SITE FOR RESIDUE SO4 A 5' AC7 Software A SO4 6 ? 3 'BINDING SITE FOR RESIDUE SO4 A 6' AC8 Software A SO4 7 ? 2 'BINDING SITE FOR RESIDUE SO4 A 7' AC9 Software A SO4 8 ? 2 'BINDING SITE FOR RESIDUE SO4 A 8' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 26 MN F . ? MN A 1 . ? 1_555 ? 2 AC1 26 MN G . ? MN A 2 . ? 1_555 ? 3 AC1 26 HOH N . ? HOH A 52 . ? 1_555 ? 4 AC1 26 HOH N . ? HOH A 207 . ? 1_555 ? 5 AC1 26 HOH N . ? HOH A 208 . ? 1_555 ? 6 AC1 26 HOH N . ? HOH A 209 . ? 1_555 ? 7 AC1 26 HOH N . ? HOH A 211 . ? 1_555 ? 8 AC1 26 HOH N . ? HOH A 213 . ? 1_555 ? 9 AC1 26 HOH N . ? HOH A 223 . ? 1_555 ? 10 AC1 26 ARG A 145 ? ARG A 386 . ? 1_555 ? 11 AC1 26 GLY A 175 ? GLY A 416 . ? 1_555 ? 12 AC1 26 SER A 176 ? SER A 417 . ? 1_555 ? 13 AC1 26 ARG A 179 ? ARG A 420 . ? 1_555 ? 14 AC1 26 CYS A 184 ? CYS A 425 . ? 1_555 ? 15 AC1 26 GLY A 185 ? GLY A 426 . ? 1_555 ? 16 AC1 26 ASP A 186 ? ASP A 427 . ? 1_555 ? 17 AC1 26 ASP A 188 ? ASP A 429 . ? 1_555 ? 18 AC1 26 TYR A 259 ? TYR A 505 . ? 1_555 ? 19 AC1 26 PHE A 260 ? PHE A 506 . ? 1_555 ? 20 AC1 26 THR A 261 ? THR A 507 . ? 1_555 ? 21 AC1 26 GLY A 262 ? GLY A 508 . ? 1_555 ? 22 AC1 26 ALA A 264 ? ALA A 510 . ? 1_555 ? 23 AC1 26 ASN A 267 ? ASN A 513 . ? 1_555 ? 24 AC1 26 DC C 6 ? DC P 6 . ? 1_555 ? 25 AC1 26 HOH P . ? HOH P 212 . ? 1_555 ? 26 AC1 26 DT B 5 ? DT T 5 . ? 1_555 ? 27 AC2 5 ZAN E . ? ZAN A 0 . ? 1_555 ? 28 AC2 5 MN G . ? MN A 2 . ? 1_555 ? 29 AC2 5 HOH N . ? HOH A 215 . ? 1_555 ? 30 AC2 5 ASP A 186 ? ASP A 427 . ? 1_555 ? 31 AC2 5 ASP A 188 ? ASP A 429 . ? 1_555 ? 32 AC3 7 ZAN E . ? ZAN A 0 . ? 1_555 ? 33 AC3 7 MN F . ? MN A 1 . ? 1_555 ? 34 AC3 7 HOH N . ? HOH A 213 . ? 1_555 ? 35 AC3 7 ASP A 186 ? ASP A 427 . ? 1_555 ? 36 AC3 7 ASP A 188 ? ASP A 429 . ? 1_555 ? 37 AC3 7 ASP A 244 ? ASP A 490 . ? 1_555 ? 38 AC3 7 DC C 6 ? DC P 6 . ? 1_555 ? 39 AC4 6 HOH N . ? HOH A 195 . ? 1_555 ? 40 AC4 6 HOH N . ? HOH A 196 . ? 1_555 ? 41 AC4 6 HOH N . ? HOH A 197 . ? 1_555 ? 42 AC4 6 HOH N . ? HOH A 198 . ? 1_555 ? 43 AC4 6 ASP A 141 ? ASP A 382 . ? 1_555 ? 44 AC4 6 HIS A 240 ? HIS A 486 . ? 1_555 ? 45 AC5 6 SER A 98 ? SER A 339 . ? 1_555 ? 46 AC5 6 ILE A 100 ? ILE A 341 . ? 1_555 ? 47 AC5 6 ALA A 103 ? ALA A 344 . ? 1_555 ? 48 AC5 6 HOH N . ? HOH A 578 . ? 1_555 ? 49 AC5 6 DA C 5 ? DA P 5 . ? 1_555 ? 50 AC5 6 HOH P . ? HOH P 50 . ? 1_555 ? 51 AC6 5 HOH N . ? HOH A 15 . ? 1_555 ? 52 AC6 5 GLY A 201 ? GLY A 442 . ? 1_555 ? 53 AC6 5 ILE A 202 ? ILE A 443 . ? 1_555 ? 54 AC6 5 PHE A 203 ? PHE A 444 . ? 1_555 ? 55 AC6 5 SER A 204 ? SER A 445 . ? 1_555 ? 56 AC7 3 HOH N . ? HOH A 116 . ? 1_555 ? 57 AC7 3 HIS A 199 ? HIS A 440 . ? 1_555 ? 58 AC7 3 ARG A 200 ? ARG A 441 . ? 1_555 ? 59 AC8 2 LYS A 32 ? LYS A 273 . ? 1_555 ? 60 AC8 2 TRP A 33 ? TRP A 274 . ? 1_555 ? 61 AC9 2 HOH N . ? HOH A 104 . ? 1_555 ? 62 AC9 2 ARG A 178 ? ARG A 419 . ? 1_555 ? # _database_PDB_matrix.entry_id 3UPQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3UPQ _atom_sites.fract_transf_matrix[1][1] 0.017865 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015708 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007144 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MN N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 242 ? ? ? A . n A 1 2 GLN 2 243 ? ? ? A . n A 1 3 PRO 3 244 ? ? ? A . n A 1 4 SER 4 245 ? ? ? A . n A 1 5 SER 5 246 ? ? ? A . n A 1 6 GLN 6 247 ? ? ? A . n A 1 7 LYS 7 248 ? ? ? A . n A 1 8 ALA 8 249 ? ? ? A . n A 1 9 THR 9 250 ? ? ? A . n A 1 10 ASN 10 251 ? ? ? A . n A 1 11 HIS 11 252 252 HIS HIS A . n A 1 12 ASN 12 253 253 ASN ASN A . n A 1 13 LEU 13 254 254 LEU LEU A . n A 1 14 HIS 14 255 255 HIS HIS A . n A 1 15 ILE 15 256 256 ILE ILE A . n A 1 16 THR 16 257 257 THR THR A . n A 1 17 GLU 17 258 258 GLU GLU A . n A 1 18 LYS 18 259 259 LYS LYS A . n A 1 19 LEU 19 260 260 LEU LEU A . n A 1 20 GLU 20 261 261 GLU GLU A . n A 1 21 VAL 21 262 262 VAL VAL A . n A 1 22 LEU 22 263 263 LEU LEU A . n A 1 23 ALA 23 264 264 ALA ALA A . n A 1 24 LYS 24 265 265 LYS LYS A . n A 1 25 ALA 25 266 266 ALA ALA A . n A 1 26 TYR 26 267 267 TYR TYR A . n A 1 27 SER 27 268 268 SER SER A . n A 1 28 VAL 28 269 269 VAL VAL A . n A 1 29 GLN 29 270 270 GLN GLN A . n A 1 30 GLY 30 271 271 GLY GLY A . n A 1 31 ASP 31 272 272 ASP ASP A . n A 1 32 LYS 32 273 273 LYS LYS A . n A 1 33 TRP 33 274 274 TRP TRP A . n A 1 34 ARG 34 275 275 ARG ARG A . n A 1 35 ALA 35 276 276 ALA ALA A . n A 1 36 LEU 36 277 277 LEU LEU A . n A 1 37 GLY 37 278 278 GLY GLY A . n A 1 38 TYR 38 279 279 TYR TYR A . n A 1 39 ALA 39 280 280 ALA ALA A . n A 1 40 LYS 40 281 281 LYS LYS A . n A 1 41 ALA 41 282 282 ALA ALA A . n A 1 42 ILE 42 283 283 ILE ILE A . n A 1 43 ASN 43 284 284 ASN ASN A . n A 1 44 ALA 44 285 285 ALA ALA A . n A 1 45 LEU 45 286 286 LEU LEU A . n A 1 46 LYS 46 287 287 LYS LYS A . n A 1 47 SER 47 288 288 SER SER A . n A 1 48 PHE 48 289 289 PHE PHE A . n A 1 49 HIS 49 290 290 HIS HIS A . n A 1 50 LYS 50 291 291 LYS LYS A . n A 1 51 PRO 51 292 292 PRO PRO A . n A 1 52 VAL 52 293 293 VAL VAL A . n A 1 53 THR 53 294 294 THR THR A . n A 1 54 SER 54 295 295 SER SER A . n A 1 55 TYR 55 296 296 TYR TYR A . n A 1 56 GLN 56 297 297 GLN GLN A . n A 1 57 GLU 57 298 298 GLU GLU A . n A 1 58 ALA 58 299 299 ALA ALA A . n A 1 59 CYS 59 300 300 CYS CYS A . n A 1 60 SER 60 301 301 SER SER A . n A 1 61 ILE 61 302 302 ILE ILE A . n A 1 62 PRO 62 303 303 PRO PRO A . n A 1 63 GLY 63 304 304 GLY GLY A . n A 1 64 ILE 64 305 305 ILE ILE A . n A 1 65 GLY 65 306 306 GLY GLY A . n A 1 66 LYS 66 307 307 LYS LYS A . n A 1 67 ARG 67 308 308 ARG ARG A . n A 1 68 MET 68 309 309 MET MET A . n A 1 69 ALA 69 310 310 ALA ALA A . n A 1 70 GLU 70 311 311 GLU GLU A . n A 1 71 LYS 71 312 312 LYS LYS A . n A 1 72 ILE 72 313 313 ILE ILE A . n A 1 73 ILE 73 314 314 ILE ILE A . n A 1 74 GLU 74 315 315 GLU GLU A . n A 1 75 ILE 75 316 316 ILE ILE A . n A 1 76 LEU 76 317 317 LEU LEU A . n A 1 77 GLU 77 318 318 GLU GLU A . n A 1 78 SER 78 319 319 SER SER A . n A 1 79 GLY 79 320 320 GLY GLY A . n A 1 80 HIS 80 321 321 HIS HIS A . n A 1 81 LEU 81 322 322 LEU LEU A . n A 1 82 ARG 82 323 323 ARG ARG A . n A 1 83 LYS 83 324 324 LYS LYS A . n A 1 84 LEU 84 325 325 LEU LEU A . n A 1 85 ASP 85 326 326 ASP ASP A . n A 1 86 HIS 86 327 327 HIS HIS A . n A 1 87 ILE 87 328 328 ILE ILE A . n A 1 88 SER 88 329 329 SER SER A . n A 1 89 GLU 89 330 330 GLU GLU A . n A 1 90 SER 90 331 331 SER SER A . n A 1 91 VAL 91 332 332 VAL VAL A . n A 1 92 PRO 92 333 333 PRO PRO A . n A 1 93 VAL 93 334 334 VAL VAL A . n A 1 94 LEU 94 335 335 LEU LEU A . n A 1 95 GLU 95 336 336 GLU GLU A . n A 1 96 LEU 96 337 337 LEU LEU A . n A 1 97 PHE 97 338 338 PHE PHE A . n A 1 98 SER 98 339 339 SER SER A . n A 1 99 ASN 99 340 340 ASN ASN A . n A 1 100 ILE 100 341 341 ILE ILE A . n A 1 101 TRP 101 342 342 TRP TRP A . n A 1 102 GLY 102 343 343 GLY GLY A . n A 1 103 ALA 103 344 344 ALA ALA A . n A 1 104 GLY 104 345 345 GLY GLY A . n A 1 105 THR 105 346 346 THR THR A . n A 1 106 LYS 106 347 347 LYS LYS A . n A 1 107 THR 107 348 348 THR THR A . n A 1 108 ALA 108 349 349 ALA ALA A . n A 1 109 GLN 109 350 350 GLN GLN A . n A 1 110 MET 110 351 351 MET MET A . n A 1 111 TRP 111 352 352 TRP TRP A . n A 1 112 TYR 112 353 353 TYR TYR A . n A 1 113 GLN 113 354 354 GLN GLN A . n A 1 114 GLN 114 355 355 GLN GLN A . n A 1 115 GLY 115 356 356 GLY GLY A . n A 1 116 PHE 116 357 357 PHE PHE A . n A 1 117 ARG 117 358 358 ARG ARG A . n A 1 118 SER 118 359 359 SER SER A . n A 1 119 LEU 119 360 360 LEU LEU A . n A 1 120 GLU 120 361 361 GLU GLU A . n A 1 121 ASP 121 362 362 ASP ASP A . n A 1 122 ILE 122 363 363 ILE ILE A . n A 1 123 ARG 123 364 364 ARG ARG A . n A 1 124 SER 124 365 365 SER SER A . n A 1 125 GLN 125 366 366 GLN GLN A . n A 1 126 ALA 126 367 367 ALA ALA A . n A 1 127 SER 127 368 368 SER SER A . n A 1 128 LEU 128 369 369 LEU LEU A . n A 1 129 THR 129 370 370 THR THR A . n A 1 130 THR 130 371 371 THR THR A . n A 1 131 GLN 131 372 372 GLN GLN A . n A 1 132 GLN 132 373 373 GLN GLN A . n A 1 133 ALA 133 374 374 ALA ALA A . n A 1 134 ILE 134 375 375 ILE ILE A . n A 1 135 GLY 135 376 376 GLY GLY A . n A 1 136 LEU 136 377 377 LEU LEU A . n A 1 137 LYS 137 378 378 LYS LYS A . n A 1 138 HIS 138 379 379 HIS HIS A . n A 1 139 TYR 139 380 380 TYR TYR A . n A 1 140 SER 140 381 381 SER SER A . n A 1 141 ASP 141 382 382 ASP ASP A . n A 1 142 PHE 142 383 383 PHE PHE A . n A 1 143 LEU 143 384 384 LEU LEU A . n A 1 144 GLU 144 385 385 GLU GLU A . n A 1 145 ARG 145 386 386 ARG ARG A . n A 1 146 MET 146 387 387 MET MET A . n A 1 147 PRO 147 388 388 PRO PRO A . n A 1 148 ARG 148 389 389 ARG ARG A . n A 1 149 GLU 149 390 390 GLU GLU A . n A 1 150 GLU 150 391 391 GLU GLU A . n A 1 151 ALA 151 392 392 ALA ALA A . n A 1 152 THR 152 393 393 THR THR A . n A 1 153 GLU 153 394 394 GLU GLU A . n A 1 154 ILE 154 395 395 ILE ILE A . n A 1 155 GLU 155 396 396 GLU GLU A . n A 1 156 GLN 156 397 397 GLN GLN A . n A 1 157 THR 157 398 398 THR THR A . n A 1 158 VAL 158 399 399 VAL VAL A . n A 1 159 GLN 159 400 400 GLN GLN A . n A 1 160 LYS 160 401 401 LYS LYS A . n A 1 161 ALA 161 402 402 ALA ALA A . n A 1 162 ALA 162 403 403 ALA ALA A . n A 1 163 GLN 163 404 404 GLN GLN A . n A 1 164 ALA 164 405 405 ALA ALA A . n A 1 165 PHE 165 406 406 PHE PHE A . n A 1 166 ASN 166 407 407 ASN ASN A . n A 1 167 SER 167 408 408 SER SER A . n A 1 168 GLY 168 409 409 GLY GLY A . n A 1 169 LEU 169 410 410 LEU LEU A . n A 1 170 LEU 170 411 411 LEU LEU A . n A 1 171 CYS 171 412 412 CYS CYS A . n A 1 172 VAL 172 413 413 VAL VAL A . n A 1 173 ALA 173 414 414 ALA ALA A . n A 1 174 CYS 174 415 415 CYS CYS A . n A 1 175 GLY 175 416 416 GLY GLY A . n A 1 176 SER 176 417 417 SER SER A . n A 1 177 TYR 177 418 418 TYR TYR A . n A 1 178 ARG 178 419 419 ARG ARG A . n A 1 179 ARG 179 420 420 ARG ARG A . n A 1 180 GLY 180 421 421 GLY GLY A . n A 1 181 LYS 181 422 422 LYS LYS A . n A 1 182 ALA 182 423 423 ALA ALA A . n A 1 183 THR 183 424 424 THR THR A . n A 1 184 CYS 184 425 425 CYS CYS A . n A 1 185 GLY 185 426 426 GLY GLY A . n A 1 186 ASP 186 427 427 ASP ASP A . n A 1 187 VAL 187 428 428 VAL VAL A . n A 1 188 ASP 188 429 429 ASP ASP A . n A 1 189 VAL 189 430 430 VAL VAL A . n A 1 190 LEU 190 431 431 LEU LEU A . n A 1 191 ILE 191 432 432 ILE ILE A . n A 1 192 THR 192 433 433 THR THR A . n A 1 193 HIS 193 434 434 HIS HIS A . n A 1 194 PRO 194 435 435 PRO PRO A . n A 1 195 ASP 195 436 436 ASP ASP A . n A 1 196 GLY 196 437 437 GLY GLY A . n A 1 197 ARG 197 438 438 ARG ARG A . n A 1 198 SER 198 439 439 SER SER A . n A 1 199 HIS 199 440 440 HIS HIS A . n A 1 200 ARG 200 441 441 ARG ARG A . n A 1 201 GLY 201 442 442 GLY GLY A . n A 1 202 ILE 202 443 443 ILE ILE A . n A 1 203 PHE 203 444 444 PHE PHE A . n A 1 204 SER 204 445 445 SER SER A . n A 1 205 ARG 205 446 446 ARG ARG A . n A 1 206 LEU 206 447 447 LEU LEU A . n A 1 207 LEU 207 448 448 LEU LEU A . n A 1 208 ASP 208 449 449 ASP ASP A . n A 1 209 SER 209 450 450 SER SER A . n A 1 210 LEU 210 451 451 LEU LEU A . n A 1 211 ARG 211 452 452 ARG ARG A . n A 1 212 GLN 212 453 453 GLN GLN A . n A 1 213 GLU 213 454 454 GLU GLU A . n A 1 214 GLY 214 455 455 GLY GLY A . n A 1 215 PHE 215 456 456 PHE PHE A . n A 1 216 LEU 216 457 457 LEU LEU A . n A 1 217 THR 217 458 458 THR THR A . n A 1 218 ASP 218 459 459 ASP ASP A . n A 1 219 ASP 219 460 460 ASP ASP A . n A 1 220 LEU 220 461 461 LEU LEU A . n A 1 221 VAL 221 462 462 VAL VAL A . n A 1 222 LYS 222 463 463 LYS LYS A . n A 1 223 GLY 223 464 464 GLY GLY A . n A 1 224 GLU 224 470 470 GLU GLU A . n A 1 225 THR 225 471 471 THR THR A . n A 1 226 LYS 226 472 472 LYS LYS A . n A 1 227 TYR 227 473 473 TYR TYR A . n A 1 228 LEU 228 474 474 LEU LEU A . n A 1 229 GLY 229 475 475 GLY GLY A . n A 1 230 VAL 230 476 476 VAL VAL A . n A 1 231 CYS 231 477 477 CYS CYS A . n A 1 232 ARG 232 478 478 ARG ARG A . n A 1 233 LEU 233 479 479 LEU LEU A . n A 1 234 PRO 234 480 480 PRO PRO A . n A 1 235 GLY 235 481 481 GLY GLY A . n A 1 236 PRO 236 482 482 PRO PRO A . n A 1 237 GLY 237 483 483 GLY GLY A . n A 1 238 ARG 238 484 484 ARG ARG A . n A 1 239 ARG 239 485 485 ARG ARG A . n A 1 240 HIS 240 486 486 HIS HIS A . n A 1 241 ARG 241 487 487 ARG ARG A . n A 1 242 ARG 242 488 488 ARG ARG A . n A 1 243 LEU 243 489 489 LEU LEU A . n A 1 244 ASP 244 490 490 ASP ASP A . n A 1 245 ILE 245 491 491 ILE ILE A . n A 1 246 ILE 246 492 492 ILE ILE A . n A 1 247 VAL 247 493 493 VAL VAL A . n A 1 248 VAL 248 494 494 VAL VAL A . n A 1 249 PRO 249 495 495 PRO PRO A . n A 1 250 TYR 250 496 496 TYR TYR A . n A 1 251 SER 251 497 497 SER SER A . n A 1 252 GLU 252 498 498 GLU GLU A . n A 1 253 PHE 253 499 499 PHE PHE A . n A 1 254 ALA 254 500 500 ALA ALA A . n A 1 255 CYS 255 501 501 CYS CYS A . n A 1 256 ALA 256 502 502 ALA ALA A . n A 1 257 LEU 257 503 503 LEU LEU A . n A 1 258 LEU 258 504 504 LEU LEU A . n A 1 259 TYR 259 505 505 TYR TYR A . n A 1 260 PHE 260 506 506 PHE PHE A . n A 1 261 THR 261 507 507 THR THR A . n A 1 262 GLY 262 508 508 GLY GLY A . n A 1 263 SER 263 509 509 SER SER A . n A 1 264 ALA 264 510 510 ALA ALA A . n A 1 265 HIS 265 511 511 HIS HIS A . n A 1 266 PHE 266 512 512 PHE PHE A . n A 1 267 ASN 267 513 513 ASN ASN A . n A 1 268 ARG 268 514 514 ARG ARG A . n A 1 269 SER 269 515 515 SER SER A . n A 1 270 MET 270 516 516 MET MET A . n A 1 271 ARG 271 517 517 ARG ARG A . n A 1 272 ALA 272 518 518 ALA ALA A . n A 1 273 LEU 273 519 519 LEU LEU A . n A 1 274 ALA 274 520 520 ALA ALA A . n A 1 275 LYS 275 521 521 LYS LYS A . n A 1 276 THR 276 522 522 THR THR A . n A 1 277 LYS 277 523 523 LYS LYS A . n A 1 278 GLY 278 524 524 GLY GLY A . n A 1 279 MET 279 525 525 MET MET A . n A 1 280 SER 280 526 526 SER SER A . n A 1 281 LEU 281 527 527 LEU LEU A . n A 1 282 SER 282 528 528 SER SER A . n A 1 283 GLU 283 529 529 GLU GLU A . n A 1 284 HIS 284 530 530 HIS HIS A . n A 1 285 ALA 285 531 531 ALA ALA A . n A 1 286 LEU 286 532 532 LEU LEU A . n A 1 287 SER 287 533 533 SER SER A . n A 1 288 THR 288 534 534 THR THR A . n A 1 289 ALA 289 535 535 ALA ALA A . n A 1 290 VAL 290 536 536 VAL VAL A . n A 1 291 VAL 291 537 ? ? ? A . n A 1 292 ARG 292 538 ? ? ? A . n A 1 293 ASN 293 539 ? ? ? A . n A 1 294 THR 294 540 ? ? ? A . n A 1 295 HIS 295 541 ? ? ? A . n A 1 296 GLY 296 542 ? ? ? A . n A 1 297 CYS 297 543 ? ? ? A . n A 1 298 LYS 298 544 ? ? ? A . n A 1 299 VAL 299 545 ? ? ? A . n A 1 300 GLY 300 546 ? ? ? A . n A 1 301 PRO 301 547 ? ? ? A . n A 1 302 GLY 302 548 548 GLY GLY A . n A 1 303 ARG 303 549 549 ARG ARG A . n A 1 304 VAL 304 550 550 VAL VAL A . n A 1 305 LEU 305 551 551 LEU LEU A . n A 1 306 PRO 306 552 552 PRO PRO A . n A 1 307 THR 307 553 553 THR THR A . n A 1 308 PRO 308 554 554 PRO PRO A . n A 1 309 THR 309 555 555 THR THR A . n A 1 310 GLU 310 556 556 GLU GLU A . n A 1 311 LYS 311 557 557 LYS LYS A . n A 1 312 ASP 312 558 558 ASP ASP A . n A 1 313 VAL 313 559 559 VAL VAL A . n A 1 314 PHE 314 560 560 PHE PHE A . n A 1 315 ARG 315 561 561 ARG ARG A . n A 1 316 LEU 316 562 562 LEU LEU A . n A 1 317 LEU 317 563 563 LEU LEU A . n A 1 318 GLY 318 564 564 GLY GLY A . n A 1 319 LEU 319 565 565 LEU LEU A . n A 1 320 PRO 320 566 566 PRO PRO A . n A 1 321 TYR 321 567 567 TYR TYR A . n A 1 322 ARG 322 568 568 ARG ARG A . n A 1 323 GLU 323 569 569 GLU GLU A . n A 1 324 PRO 324 570 570 PRO PRO A . n A 1 325 ALA 325 571 571 ALA ALA A . n A 1 326 GLU 326 572 572 GLU GLU A . n A 1 327 ARG 327 573 573 ARG ARG A . n A 1 328 ASP 328 574 574 ASP ASP A . n A 1 329 TRP 329 575 575 TRP TRP A . n B 2 1 DC 1 1 1 DC DC T . n B 2 2 DG 2 2 2 DG DG T . n B 2 3 DG 3 3 3 DG DG T . n B 2 4 DC 4 4 4 DC DC T . n B 2 5 DT 5 5 5 DT DT T . n B 2 6 DG 6 6 6 DG DG T . n B 2 7 DT 7 7 7 DT DT T . n B 2 8 DA 8 8 8 DA DA T . n B 2 9 DC 9 9 9 DC DC T . n B 2 10 DT 10 10 10 DT DT T . n B 2 11 DG 11 11 11 DG DG T . n C 3 1 DC 1 1 1 DC DC P . n C 3 2 DA 2 2 2 DA DA P . n C 3 3 DG 3 3 3 DG DG P . n C 3 4 DT 4 4 4 DT DT P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DC 6 6 6 DC DC P . n D 4 1 DG 1 1 1 DG DG D . n D 4 2 DC 2 2 2 DC DC D . n D 4 3 DC 3 3 3 DC DC D . n D 4 4 DG 4 4 4 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 ZAN 1 0 0 ZAN ZAN A . F 6 MN 1 1 1 MN MN A . G 6 MN 1 2 2 MN MN A . H 6 MN 1 3 3 MN MN A . I 7 NA 1 4 4 NA NA A . J 8 SO4 1 5 5 SO4 SO4 A . K 8 SO4 1 6 6 SO4 SO4 A . L 8 SO4 1 7 7 SO4 SO4 A . M 8 SO4 1 8 8 SO4 SO4 A . N 9 HOH 1 9 9 HOH HOH A . N 9 HOH 2 10 10 HOH HOH A . N 9 HOH 3 11 11 HOH HOH A . N 9 HOH 4 12 12 HOH HOH A . N 9 HOH 5 14 14 HOH HOH A . N 9 HOH 6 15 15 HOH HOH A . N 9 HOH 7 19 19 HOH HOH A . N 9 HOH 8 22 22 HOH HOH A . N 9 HOH 9 24 24 HOH HOH A . N 9 HOH 10 26 26 HOH HOH A . N 9 HOH 11 27 27 HOH HOH A . N 9 HOH 12 28 28 HOH HOH A . N 9 HOH 13 29 29 HOH HOH A . N 9 HOH 14 30 30 HOH HOH A . N 9 HOH 15 31 31 HOH HOH A . N 9 HOH 16 33 33 HOH HOH A . N 9 HOH 17 35 35 HOH HOH A . N 9 HOH 18 36 36 HOH HOH A . N 9 HOH 19 37 37 HOH HOH A . N 9 HOH 20 38 38 HOH HOH A . N 9 HOH 21 39 39 HOH HOH A . N 9 HOH 22 40 40 HOH HOH A . N 9 HOH 23 41 41 HOH HOH A . N 9 HOH 24 43 43 HOH HOH A . N 9 HOH 25 45 45 HOH HOH A . N 9 HOH 26 52 52 HOH HOH A . N 9 HOH 27 54 54 HOH HOH A . N 9 HOH 28 57 57 HOH HOH A . N 9 HOH 29 60 60 HOH HOH A . N 9 HOH 30 61 61 HOH HOH A . N 9 HOH 31 62 62 HOH HOH A . N 9 HOH 32 63 63 HOH HOH A . N 9 HOH 33 65 65 HOH HOH A . N 9 HOH 34 67 67 HOH HOH A . N 9 HOH 35 68 68 HOH HOH A . N 9 HOH 36 71 71 HOH HOH A . N 9 HOH 37 72 72 HOH HOH A . N 9 HOH 38 73 73 HOH HOH A . N 9 HOH 39 75 75 HOH HOH A . N 9 HOH 40 76 76 HOH HOH A . N 9 HOH 41 77 77 HOH HOH A . N 9 HOH 42 79 79 HOH HOH A . N 9 HOH 43 80 80 HOH HOH A . N 9 HOH 44 81 81 HOH HOH A . N 9 HOH 45 82 82 HOH HOH A . N 9 HOH 46 83 83 HOH HOH A . N 9 HOH 47 84 84 HOH HOH A . N 9 HOH 48 85 85 HOH HOH A . N 9 HOH 49 86 86 HOH HOH A . N 9 HOH 50 88 88 HOH HOH A . N 9 HOH 51 91 91 HOH HOH A . N 9 HOH 52 92 92 HOH HOH A . N 9 HOH 53 93 93 HOH HOH A . N 9 HOH 54 95 95 HOH HOH A . N 9 HOH 55 96 96 HOH HOH A . N 9 HOH 56 99 99 HOH HOH A . N 9 HOH 57 101 101 HOH HOH A . N 9 HOH 58 102 102 HOH HOH A . N 9 HOH 59 103 103 HOH HOH A . N 9 HOH 60 104 104 HOH HOH A . N 9 HOH 61 105 105 HOH HOH A . N 9 HOH 62 107 107 HOH HOH A . N 9 HOH 63 108 108 HOH HOH A . N 9 HOH 64 109 109 HOH HOH A . N 9 HOH 65 113 113 HOH HOH A . N 9 HOH 66 115 115 HOH HOH A . N 9 HOH 67 116 116 HOH HOH A . N 9 HOH 68 118 118 HOH HOH A . N 9 HOH 69 121 121 HOH HOH A . N 9 HOH 70 122 122 HOH HOH A . N 9 HOH 71 123 123 HOH HOH A . N 9 HOH 72 124 124 HOH HOH A . N 9 HOH 73 126 126 HOH HOH A . N 9 HOH 74 127 127 HOH HOH A . N 9 HOH 75 129 129 HOH HOH A . N 9 HOH 76 130 130 HOH HOH A . N 9 HOH 77 131 131 HOH HOH A . N 9 HOH 78 133 133 HOH HOH A . N 9 HOH 79 134 134 HOH HOH A . N 9 HOH 80 135 135 HOH HOH A . N 9 HOH 81 136 136 HOH HOH A . N 9 HOH 82 137 137 HOH HOH A . N 9 HOH 83 139 139 HOH HOH A . N 9 HOH 84 140 140 HOH HOH A . N 9 HOH 85 141 141 HOH HOH A . N 9 HOH 86 142 142 HOH HOH A . N 9 HOH 87 143 143 HOH HOH A . N 9 HOH 88 144 144 HOH HOH A . N 9 HOH 89 145 145 HOH HOH A . N 9 HOH 90 147 147 HOH HOH A . N 9 HOH 91 148 148 HOH HOH A . N 9 HOH 92 149 149 HOH HOH A . N 9 HOH 93 151 151 HOH HOH A . N 9 HOH 94 152 152 HOH HOH A . N 9 HOH 95 153 153 HOH HOH A . N 9 HOH 96 154 154 HOH HOH A . N 9 HOH 97 155 155 HOH HOH A . N 9 HOH 98 157 157 HOH HOH A . N 9 HOH 99 159 159 HOH HOH A . N 9 HOH 100 161 161 HOH HOH A . N 9 HOH 101 163 163 HOH HOH A . N 9 HOH 102 164 164 HOH HOH A . N 9 HOH 103 165 165 HOH HOH A . N 9 HOH 104 166 166 HOH HOH A . N 9 HOH 105 167 167 HOH HOH A . N 9 HOH 106 168 168 HOH HOH A . N 9 HOH 107 169 169 HOH HOH A . N 9 HOH 108 170 170 HOH HOH A . N 9 HOH 109 171 171 HOH HOH A . N 9 HOH 110 172 172 HOH HOH A . N 9 HOH 111 173 173 HOH HOH A . N 9 HOH 112 174 174 HOH HOH A . N 9 HOH 113 175 175 HOH HOH A . N 9 HOH 114 176 176 HOH HOH A . N 9 HOH 115 177 177 HOH HOH A . N 9 HOH 116 178 178 HOH HOH A . N 9 HOH 117 179 179 HOH HOH A . N 9 HOH 118 180 180 HOH HOH A . N 9 HOH 119 181 181 HOH HOH A . N 9 HOH 120 183 183 HOH HOH A . N 9 HOH 121 185 185 HOH HOH A . N 9 HOH 122 186 186 HOH HOH A . N 9 HOH 123 187 187 HOH HOH A . N 9 HOH 124 188 188 HOH HOH A . N 9 HOH 125 189 189 HOH HOH A . N 9 HOH 126 190 190 HOH HOH A . N 9 HOH 127 191 191 HOH HOH A . N 9 HOH 128 192 192 HOH HOH A . N 9 HOH 129 193 193 HOH HOH A . N 9 HOH 130 194 194 HOH HOH A . N 9 HOH 131 195 195 HOH HOH A . N 9 HOH 132 196 196 HOH HOH A . N 9 HOH 133 197 197 HOH HOH A . N 9 HOH 134 198 198 HOH HOH A . N 9 HOH 135 199 199 HOH HOH A . N 9 HOH 136 200 200 HOH HOH A . N 9 HOH 137 201 201 HOH HOH A . N 9 HOH 138 202 202 HOH HOH A . N 9 HOH 139 203 203 HOH HOH A . N 9 HOH 140 204 204 HOH HOH A . N 9 HOH 141 205 205 HOH HOH A . N 9 HOH 142 206 206 HOH HOH A . N 9 HOH 143 207 207 HOH HOH A . N 9 HOH 144 208 208 HOH HOH A . N 9 HOH 145 209 209 HOH HOH A . N 9 HOH 146 210 210 HOH HOH A . N 9 HOH 147 211 211 HOH HOH A . N 9 HOH 148 213 213 HOH HOH A . N 9 HOH 149 214 214 HOH HOH A . N 9 HOH 150 215 215 HOH HOH A . N 9 HOH 151 216 216 HOH HOH A . N 9 HOH 152 217 217 HOH HOH A . N 9 HOH 153 219 219 HOH HOH A . N 9 HOH 154 220 220 HOH HOH A . N 9 HOH 155 222 222 HOH HOH A . N 9 HOH 156 223 223 HOH HOH A . N 9 HOH 157 225 225 HOH HOH A . N 9 HOH 158 227 227 HOH HOH A . N 9 HOH 159 230 230 HOH HOH A . N 9 HOH 160 231 231 HOH HOH A . N 9 HOH 161 232 232 HOH HOH A . N 9 HOH 162 233 233 HOH HOH A . N 9 HOH 163 234 234 HOH HOH A . N 9 HOH 164 235 235 HOH HOH A . N 9 HOH 165 236 236 HOH HOH A . N 9 HOH 166 237 237 HOH HOH A . N 9 HOH 167 239 239 HOH HOH A . N 9 HOH 168 240 240 HOH HOH A . N 9 HOH 169 241 241 HOH HOH A . N 9 HOH 170 576 1 HOH HOH A . N 9 HOH 171 577 2 HOH HOH A . N 9 HOH 172 578 5 HOH HOH A . N 9 HOH 173 579 242 HOH HOH A . N 9 HOH 174 580 243 HOH HOH A . N 9 HOH 175 581 244 HOH HOH A . N 9 HOH 176 582 253 HOH HOH A . N 9 HOH 177 583 254 HOH HOH A . N 9 HOH 178 584 255 HOH HOH A . N 9 HOH 179 585 256 HOH HOH A . O 9 HOH 1 12 4 HOH HOH T . O 9 HOH 2 13 7 HOH HOH T . O 9 HOH 3 14 3 HOH HOH T . O 9 HOH 4 16 16 HOH HOH T . O 9 HOH 5 20 20 HOH HOH T . O 9 HOH 6 21 21 HOH HOH T . O 9 HOH 7 34 34 HOH HOH T . O 9 HOH 8 44 44 HOH HOH T . O 9 HOH 9 46 46 HOH HOH T . O 9 HOH 10 49 49 HOH HOH T . O 9 HOH 11 51 51 HOH HOH T . O 9 HOH 12 55 55 HOH HOH T . O 9 HOH 13 56 56 HOH HOH T . O 9 HOH 14 64 64 HOH HOH T . O 9 HOH 15 70 70 HOH HOH T . O 9 HOH 16 87 87 HOH HOH T . O 9 HOH 17 90 90 HOH HOH T . O 9 HOH 18 97 97 HOH HOH T . O 9 HOH 19 110 110 HOH HOH T . O 9 HOH 20 112 112 HOH HOH T . O 9 HOH 21 114 114 HOH HOH T . O 9 HOH 22 117 117 HOH HOH T . O 9 HOH 23 119 119 HOH HOH T . O 9 HOH 24 125 125 HOH HOH T . O 9 HOH 25 128 128 HOH HOH T . O 9 HOH 26 132 132 HOH HOH T . O 9 HOH 27 138 138 HOH HOH T . O 9 HOH 28 156 156 HOH HOH T . O 9 HOH 29 158 158 HOH HOH T . O 9 HOH 30 160 160 HOH HOH T . O 9 HOH 31 218 218 HOH HOH T . O 9 HOH 32 221 221 HOH HOH T . O 9 HOH 33 224 224 HOH HOH T . O 9 HOH 34 228 228 HOH HOH T . O 9 HOH 35 229 229 HOH HOH T . O 9 HOH 36 238 238 HOH HOH T . O 9 HOH 37 245 245 HOH HOH T . O 9 HOH 38 246 246 HOH HOH T . O 9 HOH 39 247 247 HOH HOH T . O 9 HOH 40 248 248 HOH HOH T . O 9 HOH 41 249 249 HOH HOH T . O 9 HOH 42 251 251 HOH HOH T . O 9 HOH 43 252 252 HOH HOH T . P 9 HOH 1 8 6 HOH HOH P . P 9 HOH 2 13 13 HOH HOH P . P 9 HOH 3 17 17 HOH HOH P . P 9 HOH 4 18 18 HOH HOH P . P 9 HOH 5 23 23 HOH HOH P . P 9 HOH 6 25 25 HOH HOH P . P 9 HOH 7 32 32 HOH HOH P . P 9 HOH 8 42 42 HOH HOH P . P 9 HOH 9 47 47 HOH HOH P . P 9 HOH 10 48 48 HOH HOH P . P 9 HOH 11 50 50 HOH HOH P . P 9 HOH 12 53 53 HOH HOH P . P 9 HOH 13 58 58 HOH HOH P . P 9 HOH 14 59 59 HOH HOH P . P 9 HOH 15 66 66 HOH HOH P . P 9 HOH 16 69 69 HOH HOH P . P 9 HOH 17 78 78 HOH HOH P . P 9 HOH 18 89 89 HOH HOH P . P 9 HOH 19 94 94 HOH HOH P . P 9 HOH 20 98 98 HOH HOH P . P 9 HOH 21 100 100 HOH HOH P . P 9 HOH 22 106 106 HOH HOH P . P 9 HOH 23 111 111 HOH HOH P . P 9 HOH 24 120 120 HOH HOH P . P 9 HOH 25 162 162 HOH HOH P . P 9 HOH 26 182 182 HOH HOH P . P 9 HOH 27 212 212 HOH HOH P . Q 9 HOH 1 14 8 HOH HOH D . Q 9 HOH 2 74 74 HOH HOH D . Q 9 HOH 3 146 146 HOH HOH D . Q 9 HOH 4 150 150 HOH HOH D . Q 9 HOH 5 226 226 HOH HOH D . Q 9 HOH 6 250 250 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5280 ? 1 MORE -100 ? 1 'SSA (A^2)' 16900 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O1B ? E ZAN . ? A ZAN 0 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 O2G ? E ZAN . ? A ZAN 0 ? 1_555 88.5 ? 2 O1B ? E ZAN . ? A ZAN 0 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 O1A ? E ZAN . ? A ZAN 0 ? 1_555 87.1 ? 3 O2G ? E ZAN . ? A ZAN 0 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 O1A ? E ZAN . ? A ZAN 0 ? 1_555 94.3 ? 4 O1B ? E ZAN . ? A ZAN 0 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 O ? N HOH . ? A HOH 215 ? 1_555 91.7 ? 5 O2G ? E ZAN . ? A ZAN 0 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 O ? N HOH . ? A HOH 215 ? 1_555 90.0 ? 6 O1A ? E ZAN . ? A ZAN 0 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 O ? N HOH . ? A HOH 215 ? 1_555 175.4 ? 7 O1B ? E ZAN . ? A ZAN 0 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 OD1 ? A ASP 186 ? A ASP 427 ? 1_555 168.5 ? 8 O2G ? E ZAN . ? A ZAN 0 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 OD1 ? A ASP 186 ? A ASP 427 ? 1_555 83.3 ? 9 O1A ? E ZAN . ? A ZAN 0 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 OD1 ? A ASP 186 ? A ASP 427 ? 1_555 101.6 ? 10 O ? N HOH . ? A HOH 215 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 OD1 ? A ASP 186 ? A ASP 427 ? 1_555 80.2 ? 11 O1B ? E ZAN . ? A ZAN 0 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 OD2 ? A ASP 188 ? A ASP 429 ? 1_555 93.0 ? 12 O2G ? E ZAN . ? A ZAN 0 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 OD2 ? A ASP 188 ? A ASP 429 ? 1_555 174.7 ? 13 O1A ? E ZAN . ? A ZAN 0 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 OD2 ? A ASP 188 ? A ASP 429 ? 1_555 90.8 ? 14 O ? N HOH . ? A HOH 215 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 OD2 ? A ASP 188 ? A ASP 429 ? 1_555 84.8 ? 15 OD1 ? A ASP 186 ? A ASP 427 ? 1_555 MN ? F MN . ? A MN 1 ? 1_555 OD2 ? A ASP 188 ? A ASP 429 ? 1_555 94.5 ? 16 O1A ? E ZAN . ? A ZAN 0 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 O ? N HOH . ? A HOH 213 ? 1_555 78.9 ? 17 O1A ? E ZAN . ? A ZAN 0 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 95.9 ? 18 O ? N HOH . ? A HOH 213 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 86.3 ? 19 O1A ? E ZAN . ? A ZAN 0 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 OD1 ? A ASP 188 ? A ASP 429 ? 1_555 88.5 ? 20 O ? N HOH . ? A HOH 213 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 OD1 ? A ASP 188 ? A ASP 429 ? 1_555 167.1 ? 21 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 OD1 ? A ASP 188 ? A ASP 429 ? 1_555 97.7 ? 22 O1A ? E ZAN . ? A ZAN 0 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 OD2 ? A ASP 244 ? A ASP 490 ? 1_555 168.8 ? 23 O ? N HOH . ? A HOH 213 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 OD2 ? A ASP 244 ? A ASP 490 ? 1_555 92.5 ? 24 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 OD2 ? A ASP 244 ? A ASP 490 ? 1_555 90.5 ? 25 OD1 ? A ASP 188 ? A ASP 429 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 OD2 ? A ASP 244 ? A ASP 490 ? 1_555 99.7 ? 26 O1A ? E ZAN . ? A ZAN 0 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 "O3'" ? C DC 6 ? P DC 6 ? 1_555 95.6 ? 27 O ? N HOH . ? A HOH 213 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 "O3'" ? C DC 6 ? P DC 6 ? 1_555 86.2 ? 28 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 "O3'" ? C DC 6 ? P DC 6 ? 1_555 164.8 ? 29 OD1 ? A ASP 188 ? A ASP 429 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 "O3'" ? C DC 6 ? P DC 6 ? 1_555 92.5 ? 30 OD2 ? A ASP 244 ? A ASP 490 ? 1_555 MN ? G MN . ? A MN 2 ? 1_555 "O3'" ? C DC 6 ? P DC 6 ? 1_555 76.6 ? 31 O ? N HOH . ? A HOH 195 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 O ? N HOH . ? A HOH 196 ? 1_555 88.7 ? 32 O ? N HOH . ? A HOH 195 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 O ? N HOH . ? A HOH 197 ? 1_555 86.3 ? 33 O ? N HOH . ? A HOH 196 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 O ? N HOH . ? A HOH 197 ? 1_555 84.0 ? 34 O ? N HOH . ? A HOH 195 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 O ? N HOH . ? A HOH 198 ? 1_555 86.1 ? 35 O ? N HOH . ? A HOH 196 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 O ? N HOH . ? A HOH 198 ? 1_555 169.8 ? 36 O ? N HOH . ? A HOH 197 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 O ? N HOH . ? A HOH 198 ? 1_555 87.0 ? 37 O ? N HOH . ? A HOH 195 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 OD2 ? A ASP 141 ? A ASP 382 ? 1_555 82.7 ? 38 O ? N HOH . ? A HOH 196 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 OD2 ? A ASP 141 ? A ASP 382 ? 1_555 105.7 ? 39 O ? N HOH . ? A HOH 197 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 OD2 ? A ASP 141 ? A ASP 382 ? 1_555 165.2 ? 40 O ? N HOH . ? A HOH 198 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 OD2 ? A ASP 141 ? A ASP 382 ? 1_555 82.3 ? 41 O ? N HOH . ? A HOH 195 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 ND1 ? A HIS 240 ? A HIS 486 ? 1_555 178.4 ? 42 O ? N HOH . ? A HOH 196 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 ND1 ? A HIS 240 ? A HIS 486 ? 1_555 92.5 ? 43 O ? N HOH . ? A HOH 197 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 ND1 ? A HIS 240 ? A HIS 486 ? 1_555 94.8 ? 44 O ? N HOH . ? A HOH 198 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 ND1 ? A HIS 240 ? A HIS 486 ? 1_555 92.8 ? 45 OD2 ? A ASP 141 ? A ASP 382 ? 1_555 MN ? H MN . ? A MN 3 ? 1_555 ND1 ? A HIS 240 ? A HIS 486 ? 1_555 96.0 ? 46 O ? A SER 98 ? A SER 339 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 O ? A ILE 100 ? A ILE 341 ? 1_555 91.6 ? 47 O ? A SER 98 ? A SER 339 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 O ? A ALA 103 ? A ALA 344 ? 1_555 80.5 ? 48 O ? A ILE 100 ? A ILE 341 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 O ? A ALA 103 ? A ALA 344 ? 1_555 80.8 ? 49 O ? A SER 98 ? A SER 339 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 O ? N HOH . ? A HOH 578 ? 1_555 88.6 ? 50 O ? A ILE 100 ? A ILE 341 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 O ? N HOH . ? A HOH 578 ? 1_555 102.9 ? 51 O ? A ALA 103 ? A ALA 344 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 O ? N HOH . ? A HOH 578 ? 1_555 168.6 ? 52 O ? A SER 98 ? A SER 339 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 OP1 ? C DA 5 ? P DA 5 ? 1_555 164.6 ? 53 O ? A ILE 100 ? A ILE 341 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 OP1 ? C DA 5 ? P DA 5 ? 1_555 100.3 ? 54 O ? A ALA 103 ? A ALA 344 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 OP1 ? C DA 5 ? P DA 5 ? 1_555 91.7 ? 55 O ? N HOH . ? A HOH 578 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 OP1 ? C DA 5 ? P DA 5 ? 1_555 98.2 ? 56 O ? A SER 98 ? A SER 339 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 O ? P HOH . ? P HOH 50 ? 1_555 76.5 ? 57 O ? A ILE 100 ? A ILE 341 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 O ? P HOH . ? P HOH 50 ? 1_555 157.4 ? 58 O ? A ALA 103 ? A ALA 344 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 O ? P HOH . ? P HOH 50 ? 1_555 78.3 ? 59 O ? N HOH . ? A HOH 578 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 O ? P HOH . ? P HOH 50 ? 1_555 96.1 ? 60 OP1 ? C DA 5 ? P DA 5 ? 1_555 NA ? I NA . ? A NA 4 ? 1_555 O ? P HOH . ? P HOH 50 ? 1_555 89.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-23 2 'Structure model' 1 1 2012-07-18 3 'Structure model' 1 2 2012-09-26 4 'Structure model' 1 3 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.value' 18 4 'Structure model' '_struct_conn.pdbx_dist_value' 19 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 33 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 34 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 35 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7_650)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3UPQ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;AUTHORS STATE THAT THIS IS A DELETION-SUBSTITUTION MUTANT, WITH RESIDUES SQEENGQQQ IN THE WILDTYPE SUBSTITUTED BY RESIDUES KGET. HOWEVER, THE RESIDUE NUMBERING WAS KEPT CONSISTENT WITH THE WT PROTEIN. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.480 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.127 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" T DG 2 ? ? "C2'" T DG 2 ? ? "C1'" T DG 2 ? ? 96.30 102.40 -6.10 0.80 N 2 1 "O4'" T DG 2 ? ? "C1'" T DG 2 ? ? N9 T DG 2 ? ? 111.23 108.30 2.93 0.30 N 3 1 "C3'" T DA 8 ? ? "C2'" T DA 8 ? ? "C1'" T DA 8 ? ? 97.05 102.40 -5.35 0.80 N 4 1 "O4'" T DA 8 ? ? "C1'" T DA 8 ? ? N9 T DA 8 ? ? 110.85 108.30 2.55 0.30 N 5 1 "O4'" T DT 10 ? ? "C1'" T DT 10 ? ? N1 T DT 10 ? ? 103.00 108.00 -5.00 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 288 ? ? -141.77 -16.35 2 1 HIS A 290 ? ? -44.19 -72.40 3 1 GLU A 318 ? ? -58.59 -72.19 4 1 ASN A 407 ? ? -168.88 114.37 5 1 CYS A 415 ? ? -103.79 -136.64 6 1 ARG A 438 ? ? -134.78 -33.98 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 252 ? CG ? A HIS 11 CG 2 1 Y 1 A HIS 252 ? ND1 ? A HIS 11 ND1 3 1 Y 1 A HIS 252 ? CD2 ? A HIS 11 CD2 4 1 Y 1 A HIS 252 ? CE1 ? A HIS 11 CE1 5 1 Y 1 A HIS 252 ? NE2 ? A HIS 11 NE2 6 1 Y 1 A ASN 253 ? CB ? A ASN 12 CB 7 1 Y 1 A ASN 253 ? CG ? A ASN 12 CG 8 1 Y 1 A ASN 253 ? OD1 ? A ASN 12 OD1 9 1 Y 1 A ASN 253 ? ND2 ? A ASN 12 ND2 10 1 Y 1 A LEU 254 ? CG ? A LEU 13 CG 11 1 Y 1 A LEU 254 ? CD1 ? A LEU 13 CD1 12 1 Y 1 A LEU 254 ? CD2 ? A LEU 13 CD2 13 1 Y 1 A HIS 255 ? CG ? A HIS 14 CG 14 1 Y 1 A HIS 255 ? ND1 ? A HIS 14 ND1 15 1 Y 1 A HIS 255 ? CD2 ? A HIS 14 CD2 16 1 Y 1 A HIS 255 ? CE1 ? A HIS 14 CE1 17 1 Y 1 A HIS 255 ? NE2 ? A HIS 14 NE2 18 1 Y 1 A ILE 256 ? CD1 ? A ILE 15 CD1 19 1 Y 1 A GLU 258 ? CG ? A GLU 17 CG 20 1 Y 1 A GLU 258 ? CD ? A GLU 17 CD 21 1 Y 1 A GLU 258 ? OE1 ? A GLU 17 OE1 22 1 Y 1 A GLU 258 ? OE2 ? A GLU 17 OE2 23 1 Y 1 A LYS 259 ? CG ? A LYS 18 CG 24 1 Y 1 A LYS 259 ? CD ? A LYS 18 CD 25 1 Y 1 A LYS 259 ? CE ? A LYS 18 CE 26 1 Y 1 A LYS 259 ? NZ ? A LYS 18 NZ 27 1 Y 1 A LYS 265 ? CG ? A LYS 24 CG 28 1 Y 1 A LYS 265 ? CD ? A LYS 24 CD 29 1 Y 1 A LYS 265 ? CE ? A LYS 24 CE 30 1 Y 1 A LYS 265 ? NZ ? A LYS 24 NZ 31 1 Y 1 A LYS 287 ? CB ? A LYS 46 CB 32 1 Y 1 A LYS 287 ? CG ? A LYS 46 CG 33 1 Y 1 A LYS 287 ? CD ? A LYS 46 CD 34 1 Y 1 A LYS 287 ? CE ? A LYS 46 CE 35 1 Y 1 A LYS 287 ? NZ ? A LYS 46 NZ 36 1 Y 1 A SER 288 ? OG ? A SER 47 OG 37 1 Y 1 A PHE 289 ? CG ? A PHE 48 CG 38 1 Y 1 A PHE 289 ? CD1 ? A PHE 48 CD1 39 1 Y 1 A PHE 289 ? CD2 ? A PHE 48 CD2 40 1 Y 1 A PHE 289 ? CE1 ? A PHE 48 CE1 41 1 Y 1 A PHE 289 ? CE2 ? A PHE 48 CE2 42 1 Y 1 A PHE 289 ? CZ ? A PHE 48 CZ 43 1 Y 1 A HIS 290 ? CB ? A HIS 49 CB 44 1 Y 1 A HIS 290 ? CG ? A HIS 49 CG 45 1 Y 1 A HIS 290 ? ND1 ? A HIS 49 ND1 46 1 Y 1 A HIS 290 ? CD2 ? A HIS 49 CD2 47 1 Y 1 A HIS 290 ? CE1 ? A HIS 49 CE1 48 1 Y 1 A HIS 290 ? NE2 ? A HIS 49 NE2 49 1 Y 1 A LYS 291 ? CB ? A LYS 50 CB 50 1 Y 1 A LYS 291 ? CG ? A LYS 50 CG 51 1 Y 1 A LYS 291 ? CD ? A LYS 50 CD 52 1 Y 1 A LYS 291 ? CE ? A LYS 50 CE 53 1 Y 1 A LYS 291 ? NZ ? A LYS 50 NZ 54 1 Y 1 A VAL 293 ? CB ? A VAL 52 CB 55 1 Y 1 A VAL 293 ? CG1 ? A VAL 52 CG1 56 1 Y 1 A VAL 293 ? CG2 ? A VAL 52 CG2 57 1 Y 1 A SER 295 ? OG ? A SER 54 OG 58 1 Y 1 A TYR 296 ? CG ? A TYR 55 CG 59 1 Y 1 A TYR 296 ? CD1 ? A TYR 55 CD1 60 1 Y 1 A TYR 296 ? CD2 ? A TYR 55 CD2 61 1 Y 1 A TYR 296 ? CE1 ? A TYR 55 CE1 62 1 Y 1 A TYR 296 ? CE2 ? A TYR 55 CE2 63 1 Y 1 A TYR 296 ? CZ ? A TYR 55 CZ 64 1 Y 1 A TYR 296 ? OH ? A TYR 55 OH 65 1 Y 1 A GLN 297 ? CG ? A GLN 56 CG 66 1 Y 1 A GLN 297 ? CD ? A GLN 56 CD 67 1 Y 1 A GLN 297 ? OE1 ? A GLN 56 OE1 68 1 Y 1 A GLN 297 ? NE2 ? A GLN 56 NE2 69 1 Y 1 A GLU 298 ? CG ? A GLU 57 CG 70 1 Y 1 A GLU 298 ? CD ? A GLU 57 CD 71 1 Y 1 A GLU 298 ? OE1 ? A GLU 57 OE1 72 1 Y 1 A GLU 298 ? OE2 ? A GLU 57 OE2 73 1 Y 1 A SER 301 ? OG ? A SER 60 OG 74 1 Y 1 A ILE 302 ? CD1 ? A ILE 61 CD1 75 1 Y 1 A ILE 305 ? CD1 ? A ILE 64 CD1 76 1 Y 1 A LYS 307 ? CG ? A LYS 66 CG 77 1 Y 1 A LYS 307 ? CD ? A LYS 66 CD 78 1 Y 1 A LYS 307 ? CE ? A LYS 66 CE 79 1 Y 1 A LYS 307 ? NZ ? A LYS 66 NZ 80 1 Y 1 A ARG 308 ? CZ ? A ARG 67 CZ 81 1 Y 1 A ARG 308 ? NH1 ? A ARG 67 NH1 82 1 Y 1 A ARG 308 ? NH2 ? A ARG 67 NH2 83 1 Y 1 A ILE 313 ? CD1 ? A ILE 72 CD1 84 1 Y 1 A ILE 314 ? CG1 ? A ILE 73 CG1 85 1 Y 1 A ILE 314 ? CG2 ? A ILE 73 CG2 86 1 Y 1 A ILE 314 ? CD1 ? A ILE 73 CD1 87 1 Y 1 A ILE 316 ? CD1 ? A ILE 75 CD1 88 1 Y 1 A GLU 318 ? CG ? A GLU 77 CG 89 1 Y 1 A GLU 318 ? CD ? A GLU 77 CD 90 1 Y 1 A GLU 318 ? OE1 ? A GLU 77 OE1 91 1 Y 1 A GLU 318 ? OE2 ? A GLU 77 OE2 92 1 Y 1 A SER 319 ? OG ? A SER 78 OG 93 1 Y 1 A HIS 321 ? CG ? A HIS 80 CG 94 1 Y 1 A HIS 321 ? ND1 ? A HIS 80 ND1 95 1 Y 1 A HIS 321 ? CD2 ? A HIS 80 CD2 96 1 Y 1 A HIS 321 ? CE1 ? A HIS 80 CE1 97 1 Y 1 A HIS 321 ? NE2 ? A HIS 80 NE2 98 1 Y 1 A LEU 322 ? CG ? A LEU 81 CG 99 1 Y 1 A LEU 322 ? CD1 ? A LEU 81 CD1 100 1 Y 1 A LEU 322 ? CD2 ? A LEU 81 CD2 101 1 Y 1 A ARG 323 ? CG ? A ARG 82 CG 102 1 Y 1 A ARG 323 ? CD ? A ARG 82 CD 103 1 Y 1 A ARG 323 ? NE ? A ARG 82 NE 104 1 Y 1 A ARG 323 ? CZ ? A ARG 82 CZ 105 1 Y 1 A ARG 323 ? NH1 ? A ARG 82 NH1 106 1 Y 1 A ARG 323 ? NH2 ? A ARG 82 NH2 107 1 Y 1 A LYS 324 ? NZ ? A LYS 83 NZ 108 1 Y 1 A ILE 328 ? CD1 ? A ILE 87 CD1 109 1 Y 1 A GLN 397 ? CD ? A GLN 156 CD 110 1 Y 1 A GLN 397 ? OE1 ? A GLN 156 OE1 111 1 Y 1 A GLN 397 ? NE2 ? A GLN 156 NE2 112 1 Y 1 A LYS 401 ? CG ? A LYS 160 CG 113 1 Y 1 A LYS 401 ? CD ? A LYS 160 CD 114 1 Y 1 A LYS 401 ? CE ? A LYS 160 CE 115 1 Y 1 A LYS 401 ? NZ ? A LYS 160 NZ 116 1 Y 1 A ARG 438 ? CG ? A ARG 197 CG 117 1 Y 1 A ARG 438 ? CD ? A ARG 197 CD 118 1 Y 1 A ARG 438 ? NE ? A ARG 197 NE 119 1 Y 1 A ARG 438 ? CZ ? A ARG 197 CZ 120 1 Y 1 A ARG 438 ? NH1 ? A ARG 197 NH1 121 1 Y 1 A ARG 438 ? NH2 ? A ARG 197 NH2 122 1 Y 1 A ILE 443 ? CG1 ? A ILE 202 CG1 123 1 Y 1 A ILE 443 ? CG2 ? A ILE 202 CG2 124 1 Y 1 A ILE 443 ? CD1 ? A ILE 202 CD1 125 1 Y 1 A ARG 446 ? CG ? A ARG 205 CG 126 1 Y 1 A ARG 446 ? CD ? A ARG 205 CD 127 1 Y 1 A ARG 446 ? NE ? A ARG 205 NE 128 1 Y 1 A ARG 446 ? CZ ? A ARG 205 CZ 129 1 Y 1 A ARG 446 ? NH1 ? A ARG 205 NH1 130 1 Y 1 A ARG 446 ? NH2 ? A ARG 205 NH2 131 1 Y 1 A ASP 449 ? OD1 ? A ASP 208 OD1 132 1 Y 1 A ASP 449 ? OD2 ? A ASP 208 OD2 133 1 Y 1 A VAL 536 ? CG1 ? A VAL 290 CG1 134 1 Y 1 A VAL 536 ? CG2 ? A VAL 290 CG2 135 1 Y 1 A LYS 557 ? CD ? A LYS 311 CD 136 1 Y 1 A LYS 557 ? CE ? A LYS 311 CE 137 1 Y 1 A LYS 557 ? NZ ? A LYS 311 NZ 138 1 Y 1 A GLU 572 ? CG ? A GLU 326 CG 139 1 Y 1 A GLU 572 ? CD ? A GLU 326 CD 140 1 Y 1 A GLU 572 ? OE1 ? A GLU 326 OE1 141 1 Y 1 A GLU 572 ? OE2 ? A GLU 326 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 242 ? A ALA 1 2 1 Y 1 A GLN 243 ? A GLN 2 3 1 Y 1 A PRO 244 ? A PRO 3 4 1 Y 1 A SER 245 ? A SER 4 5 1 Y 1 A SER 246 ? A SER 5 6 1 Y 1 A GLN 247 ? A GLN 6 7 1 Y 1 A LYS 248 ? A LYS 7 8 1 Y 1 A ALA 249 ? A ALA 8 9 1 Y 1 A THR 250 ? A THR 9 10 1 Y 1 A ASN 251 ? A ASN 10 11 1 Y 1 A VAL 537 ? A VAL 291 12 1 Y 1 A ARG 538 ? A ARG 292 13 1 Y 1 A ASN 539 ? A ASN 293 14 1 Y 1 A THR 540 ? A THR 294 15 1 Y 1 A HIS 541 ? A HIS 295 16 1 Y 1 A GLY 542 ? A GLY 296 17 1 Y 1 A CYS 543 ? A CYS 297 18 1 Y 1 A LYS 544 ? A LYS 298 19 1 Y 1 A VAL 545 ? A VAL 299 20 1 Y 1 A GLY 546 ? A GLY 300 21 1 Y 1 A PRO 547 ? A PRO 301 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 MN MN MN N N 393 NA NA NA N N 394 PHE N N N N 395 PHE CA C N S 396 PHE C C N N 397 PHE O O N N 398 PHE CB C N N 399 PHE CG C Y N 400 PHE CD1 C Y N 401 PHE CD2 C Y N 402 PHE CE1 C Y N 403 PHE CE2 C Y N 404 PHE CZ C Y N 405 PHE OXT O N N 406 PHE H H N N 407 PHE H2 H N N 408 PHE HA H N N 409 PHE HB2 H N N 410 PHE HB3 H N N 411 PHE HD1 H N N 412 PHE HD2 H N N 413 PHE HE1 H N N 414 PHE HE2 H N N 415 PHE HZ H N N 416 PHE HXT H N N 417 PRO N N N N 418 PRO CA C N S 419 PRO C C N N 420 PRO O O N N 421 PRO CB C N N 422 PRO CG C N N 423 PRO CD C N N 424 PRO OXT O N N 425 PRO H H N N 426 PRO HA H N N 427 PRO HB2 H N N 428 PRO HB3 H N N 429 PRO HG2 H N N 430 PRO HG3 H N N 431 PRO HD2 H N N 432 PRO HD3 H N N 433 PRO HXT H N N 434 SER N N N N 435 SER CA C N S 436 SER C C N N 437 SER O O N N 438 SER CB C N N 439 SER OG O N N 440 SER OXT O N N 441 SER H H N N 442 SER H2 H N N 443 SER HA H N N 444 SER HB2 H N N 445 SER HB3 H N N 446 SER HG H N N 447 SER HXT H N N 448 SO4 S S N N 449 SO4 O1 O N N 450 SO4 O2 O N N 451 SO4 O3 O N N 452 SO4 O4 O N N 453 THR N N N N 454 THR CA C N S 455 THR C C N N 456 THR O O N N 457 THR CB C N R 458 THR OG1 O N N 459 THR CG2 C N N 460 THR OXT O N N 461 THR H H N N 462 THR H2 H N N 463 THR HA H N N 464 THR HB H N N 465 THR HG1 H N N 466 THR HG21 H N N 467 THR HG22 H N N 468 THR HG23 H N N 469 THR HXT H N N 470 TRP N N N N 471 TRP CA C N S 472 TRP C C N N 473 TRP O O N N 474 TRP CB C N N 475 TRP CG C Y N 476 TRP CD1 C Y N 477 TRP CD2 C Y N 478 TRP NE1 N Y N 479 TRP CE2 C Y N 480 TRP CE3 C Y N 481 TRP CZ2 C Y N 482 TRP CZ3 C Y N 483 TRP CH2 C Y N 484 TRP OXT O N N 485 TRP H H N N 486 TRP H2 H N N 487 TRP HA H N N 488 TRP HB2 H N N 489 TRP HB3 H N N 490 TRP HD1 H N N 491 TRP HE1 H N N 492 TRP HE3 H N N 493 TRP HZ2 H N N 494 TRP HZ3 H N N 495 TRP HH2 H N N 496 TRP HXT H N N 497 TYR N N N N 498 TYR CA C N S 499 TYR C C N N 500 TYR O O N N 501 TYR CB C N N 502 TYR CG C Y N 503 TYR CD1 C Y N 504 TYR CD2 C Y N 505 TYR CE1 C Y N 506 TYR CE2 C Y N 507 TYR CZ C Y N 508 TYR OH O N N 509 TYR OXT O N N 510 TYR H H N N 511 TYR H2 H N N 512 TYR HA H N N 513 TYR HB2 H N N 514 TYR HB3 H N N 515 TYR HD1 H N N 516 TYR HD2 H N N 517 TYR HE1 H N N 518 TYR HE2 H N N 519 TYR HH H N N 520 TYR HXT H N N 521 VAL N N N N 522 VAL CA C N S 523 VAL C C N N 524 VAL O O N N 525 VAL CB C N N 526 VAL CG1 C N N 527 VAL CG2 C N N 528 VAL OXT O N N 529 VAL H H N N 530 VAL H2 H N N 531 VAL HA H N N 532 VAL HB H N N 533 VAL HG11 H N N 534 VAL HG12 H N N 535 VAL HG13 H N N 536 VAL HG21 H N N 537 VAL HG22 H N N 538 VAL HG23 H N N 539 VAL HXT H N N 540 ZAN PA P N N 541 ZAN PB P N N 542 ZAN PG P N N 543 ZAN O1A O N N 544 ZAN O1B O N N 545 ZAN O1G O N N 546 ZAN O2A O N N 547 ZAN O2B O N N 548 ZAN O2G O N N 549 ZAN N3A N N N 550 ZAN O3B O N N 551 ZAN O3G O N N 552 ZAN "O5'" O N N 553 ZAN "C5'" C N N 554 ZAN "C4'" C N R 555 ZAN "O4'" O N N 556 ZAN "C3'" C N S 557 ZAN "O3'" O N N 558 ZAN "C2'" C N R 559 ZAN "O2'" O N N 560 ZAN "C1'" C N R 561 ZAN N9 N Y N 562 ZAN C8 C Y N 563 ZAN N7 N Y N 564 ZAN C5 C Y N 565 ZAN C6 C Y N 566 ZAN N6 N N N 567 ZAN N1 N Y N 568 ZAN C2 C Y N 569 ZAN N3 N Y N 570 ZAN C4 C Y N 571 ZAN H1 H N N 572 ZAN H2 H N N 573 ZAN H3 H N N 574 ZAN H4 H N N 575 ZAN H5 H N N 576 ZAN H6 H N N 577 ZAN H7 H N N 578 ZAN H8 H N N 579 ZAN H9 H N N 580 ZAN H10 H N N 581 ZAN H11 H N N 582 ZAN H12 H N N 583 ZAN H13 H N N 584 ZAN H14 H N N 585 ZAN H15 H N N 586 ZAN H16 H N N 587 ZAN H17 H N N 588 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 SO4 S O1 doub N N 439 SO4 S O2 doub N N 440 SO4 S O3 sing N N 441 SO4 S O4 sing N N 442 THR N CA sing N N 443 THR N H sing N N 444 THR N H2 sing N N 445 THR CA C sing N N 446 THR CA CB sing N N 447 THR CA HA sing N N 448 THR C O doub N N 449 THR C OXT sing N N 450 THR CB OG1 sing N N 451 THR CB CG2 sing N N 452 THR CB HB sing N N 453 THR OG1 HG1 sing N N 454 THR CG2 HG21 sing N N 455 THR CG2 HG22 sing N N 456 THR CG2 HG23 sing N N 457 THR OXT HXT sing N N 458 TRP N CA sing N N 459 TRP N H sing N N 460 TRP N H2 sing N N 461 TRP CA C sing N N 462 TRP CA CB sing N N 463 TRP CA HA sing N N 464 TRP C O doub N N 465 TRP C OXT sing N N 466 TRP CB CG sing N N 467 TRP CB HB2 sing N N 468 TRP CB HB3 sing N N 469 TRP CG CD1 doub Y N 470 TRP CG CD2 sing Y N 471 TRP CD1 NE1 sing Y N 472 TRP CD1 HD1 sing N N 473 TRP CD2 CE2 doub Y N 474 TRP CD2 CE3 sing Y N 475 TRP NE1 CE2 sing Y N 476 TRP NE1 HE1 sing N N 477 TRP CE2 CZ2 sing Y N 478 TRP CE3 CZ3 doub Y N 479 TRP CE3 HE3 sing N N 480 TRP CZ2 CH2 doub Y N 481 TRP CZ2 HZ2 sing N N 482 TRP CZ3 CH2 sing Y N 483 TRP CZ3 HZ3 sing N N 484 TRP CH2 HH2 sing N N 485 TRP OXT HXT sing N N 486 TYR N CA sing N N 487 TYR N H sing N N 488 TYR N H2 sing N N 489 TYR CA C sing N N 490 TYR CA CB sing N N 491 TYR CA HA sing N N 492 TYR C O doub N N 493 TYR C OXT sing N N 494 TYR CB CG sing N N 495 TYR CB HB2 sing N N 496 TYR CB HB3 sing N N 497 TYR CG CD1 doub Y N 498 TYR CG CD2 sing Y N 499 TYR CD1 CE1 sing Y N 500 TYR CD1 HD1 sing N N 501 TYR CD2 CE2 doub Y N 502 TYR CD2 HD2 sing N N 503 TYR CE1 CZ doub Y N 504 TYR CE1 HE1 sing N N 505 TYR CE2 CZ sing Y N 506 TYR CE2 HE2 sing N N 507 TYR CZ OH sing N N 508 TYR OH HH sing N N 509 TYR OXT HXT sing N N 510 VAL N CA sing N N 511 VAL N H sing N N 512 VAL N H2 sing N N 513 VAL CA C sing N N 514 VAL CA CB sing N N 515 VAL CA HA sing N N 516 VAL C O doub N N 517 VAL C OXT sing N N 518 VAL CB CG1 sing N N 519 VAL CB CG2 sing N N 520 VAL CB HB sing N N 521 VAL CG1 HG11 sing N N 522 VAL CG1 HG12 sing N N 523 VAL CG1 HG13 sing N N 524 VAL CG2 HG21 sing N N 525 VAL CG2 HG22 sing N N 526 VAL CG2 HG23 sing N N 527 VAL OXT HXT sing N N 528 ZAN C2 N1 doub Y N 529 ZAN C2 N3 sing Y N 530 ZAN "O2'" "C2'" sing N N 531 ZAN N1 C6 sing Y N 532 ZAN N3 C4 doub Y N 533 ZAN "C2'" "C1'" sing N N 534 ZAN "C2'" "C3'" sing N N 535 ZAN C6 N6 sing N N 536 ZAN C6 C5 doub Y N 537 ZAN C4 C5 sing Y N 538 ZAN C4 N9 sing Y N 539 ZAN "O3'" "C3'" sing N N 540 ZAN "C1'" N9 sing N N 541 ZAN "C1'" "O4'" sing N N 542 ZAN C5 N7 sing Y N 543 ZAN "C3'" "C4'" sing N N 544 ZAN N9 C8 sing Y N 545 ZAN O2B PB doub N N 546 ZAN N7 C8 doub Y N 547 ZAN "C4'" "O4'" sing N N 548 ZAN "C4'" "C5'" sing N N 549 ZAN PB O1B sing N N 550 ZAN PB N3A sing N N 551 ZAN PB O3B sing N N 552 ZAN N3A PA sing N N 553 ZAN O3B PG sing N N 554 ZAN "C5'" "O5'" sing N N 555 ZAN "O5'" PA sing N N 556 ZAN PA O2A doub N N 557 ZAN PA O1A sing N N 558 ZAN O3G PG doub N N 559 ZAN PG O1G sing N N 560 ZAN PG O2G sing N N 561 ZAN O1A H1 sing N N 562 ZAN O1B H2 sing N N 563 ZAN O1G H3 sing N N 564 ZAN O2G H4 sing N N 565 ZAN N3A H5 sing N N 566 ZAN "C5'" H6 sing N N 567 ZAN "C5'" H7 sing N N 568 ZAN "C4'" H8 sing N N 569 ZAN "C3'" H9 sing N N 570 ZAN "O3'" H10 sing N N 571 ZAN "C2'" H11 sing N N 572 ZAN "O2'" H12 sing N N 573 ZAN "C1'" H13 sing N N 574 ZAN C8 H14 sing N N 575 ZAN N6 H15 sing N N 576 ZAN N6 H16 sing N N 577 ZAN C2 H17 sing N N 578 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3UPQ 'double helix' 3UPQ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 D DG 4 1_555 0.314 0.016 0.092 -16.121 10.823 0.757 1 T_DC1:DG4_D T 1 ? D 4 ? 19 1 1 B DG 2 1_555 D DC 3 1_555 -0.070 -0.152 -0.015 6.925 1.440 -0.382 2 T_DG2:DC3_D T 2 ? D 3 ? 19 1 1 B DG 3 1_555 D DC 2 1_555 -0.250 -0.078 0.396 15.629 -7.883 1.168 3 T_DG3:DC2_D T 3 ? D 2 ? 19 1 1 B DC 4 1_555 D DG 1 1_555 0.333 -0.182 0.019 12.235 -14.346 1.295 4 T_DC4:DG1_D T 4 ? D 1 ? 19 1 1 B DG 6 1_555 C DC 6 1_555 -0.042 -0.085 0.331 5.324 -10.737 1.583 5 T_DG6:DC6_P T 6 ? P 6 ? 19 1 1 B DT 7 1_555 C DA 5 1_555 -0.154 -0.174 0.025 2.671 -11.495 3.354 6 T_DT7:DA5_P T 7 ? P 5 ? 20 1 1 B DA 8 1_555 C DT 4 1_555 0.093 -0.209 -0.182 0.321 -2.903 -1.103 7 T_DA8:DT4_P T 8 ? P 4 ? 20 1 1 B DC 9 1_555 C DG 3 1_555 0.156 -0.133 0.052 5.607 -14.661 -0.203 8 T_DC9:DG3_P T 9 ? P 3 ? 19 1 1 B DT 10 1_555 C DA 2 1_555 -0.189 -0.158 0.106 4.979 -10.125 0.445 9 T_DT10:DA2_P T 10 ? P 2 ? 20 1 1 B DG 11 1_555 C DC 1 1_555 -0.191 -0.152 0.626 24.377 -14.282 -1.077 10 T_DG11:DC1_P T 11 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 D DG 4 1_555 B DG 2 1_555 D DC 3 1_555 0.329 0.041 2.956 1.536 -1.463 26.106 0.449 -0.350 2.963 -3.232 -3.394 26.190 1 TT_DC1DG2:DC3DG4_DD T 1 ? D 4 ? T 2 ? D 3 ? 1 B DG 2 1_555 D DC 3 1_555 B DG 3 1_555 D DC 2 1_555 -0.733 -0.169 3.123 -6.376 2.678 35.995 -0.626 0.315 3.182 4.285 10.202 36.632 2 TT_DG2DG3:DC2DC3_DD T 2 ? D 3 ? T 3 ? D 2 ? 1 B DG 3 1_555 D DC 2 1_555 B DC 4 1_555 D DG 1 1_555 0.600 -1.000 3.369 0.579 2.538 36.156 -1.971 -0.881 3.303 4.082 -0.931 36.246 3 TT_DG3DC4:DG1DC2_DD T 3 ? D 2 ? T 4 ? D 1 ? 1 B DG 6 1_555 C DC 6 1_555 B DT 7 1_555 C DA 5 1_555 0.783 -0.732 3.456 2.387 6.604 33.159 -2.366 -0.943 3.301 11.412 -4.125 33.874 4 TT_DG6DT7:DA5DC6_PP T 6 ? P 6 ? T 7 ? P 5 ? 1 B DT 7 1_555 C DA 5 1_555 B DA 8 1_555 C DT 4 1_555 -0.457 -0.674 3.380 1.191 8.311 30.891 -2.735 1.046 3.080 15.252 -2.185 31.985 5 TT_DT7DA8:DT4DA5_PP T 7 ? P 5 ? T 8 ? P 4 ? 1 B DA 8 1_555 C DT 4 1_555 B DC 9 1_555 C DG 3 1_555 -0.789 -0.355 3.173 -2.429 2.400 34.598 -0.952 0.958 3.188 4.023 4.073 34.761 6 TT_DA8DC9:DG3DT4_PP T 8 ? P 4 ? T 9 ? P 3 ? 1 B DC 9 1_555 C DG 3 1_555 B DT 10 1_555 C DA 2 1_555 -0.404 -0.520 3.360 -0.054 5.087 30.601 -1.967 0.745 3.234 9.556 0.102 31.011 7 TT_DC9DT10:DA2DG3_PP T 9 ? P 3 ? T 10 ? P 2 ? 1 B DT 10 1_555 C DA 2 1_555 B DG 11 1_555 C DC 1 1_555 0.401 0.571 2.890 -3.928 12.082 31.139 -0.816 -1.281 2.841 21.422 6.964 33.572 8 TT_DT10DG11:DC1DA2_PP T 10 ? P 2 ? T 11 ? P 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 "5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine" ZAN 6 'MANGANESE (II) ION' MN 7 'SODIUM ION' NA 8 'SULFATE ION' SO4 9 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3MGI _pdbx_initial_refinement_model.details 'PDB ENTRY 3MGI' #