HEADER TRANSCRIPTION 15-DEC-11 4ACI TITLE STRUCTURE OF THE C. GLUTAMICUM ACNR CRYSTAL FORM II COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REPRESSOR ACNR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 2-188; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM; SOURCE 3 ORGANISM_TAXID: 1718; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSCRIPTION, ACONITASE, CITRATE, TETR SUPERFAMILY EXPDTA X-RAY DIFFRACTION AUTHOR J.GARCIA-NAFRIA,M.BAUMGART,J.P.TURKENBURG,A.J.WILKINSON,M.BOTT, AUTHOR 2 K.S.WILSON REVDAT 4 20-DEC-23 4ACI 1 REMARK LINK REVDAT 3 19-JUN-13 4ACI 1 JRNL REVDAT 2 01-MAY-13 4ACI 1 AUTHOR JRNL REMARK REVDAT 1 26-DEC-12 4ACI 0 JRNL AUTH J.GARCIA-NAFRIA,M.BAUMGART,J.P.TURKENBURG,A.J.WILKINSON, JRNL AUTH 2 M.BOTT,K.S.WILSON JRNL TITL CRYSTAL AND SOLUTION STUDIES REVEAL THAT THE TRANSCRIPTIONAL JRNL TITL 2 REGULATOR ACNR OF CORYNEBACTERIUM GLUTAMICUM IS REGULATED BY JRNL TITL 3 CITRATE:MG2+ BINDING TO A NON-CANONICAL POCKET. JRNL REF J.BIOL.CHEM. V. 288 15800 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23589369 JRNL DOI 10.1074/JBC.M113.462440 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.GARCIA-NAFRIA,M.BAUMGART,M.BOTT,A.J.WILKINSON,K.S.WILSON REMARK 1 TITL THE CORYNEBACTERIUM GLUTAMICUM ACONITASE REPRESSOR: REMARK 1 TITL 2 SCRATCHING AROUND FOR CRYSTALS. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 66 1074 2010 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 20823530 REMARK 1 DOI 10.1107/S1744309110029015 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0116 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 42347 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.142 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2250 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2831 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.1960 REMARK 3 BIN FREE R VALUE SET COUNT : 143 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2801 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 348 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.21000 REMARK 3 B22 (A**2) : -0.51000 REMARK 3 B33 (A**2) : 0.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.122 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.057 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.709 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2991 ; 0.021 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2123 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4046 ; 1.620 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5105 ; 1.089 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 379 ; 4.780 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 157 ;34.374 ;22.420 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 546 ;15.054 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;15.767 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 442 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3377 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 668 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5114 ; 7.029 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 214 ;63.328 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5222 ;23.293 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY. REMARK 4 REMARK 4 4ACI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1290050717. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44662 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 72.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4AC6 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M AMMONIUM PHOSPHATE; 100MM NACITRATE REMARK 280 PH4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.10500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.78500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.39500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.78500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.10500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.39500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 SER A 2 REMARK 465 VAL A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 GLY A 6 REMARK 465 ASP A 7 REMARK 465 LYS A 8 REMARK 465 PRO A 9 REMARK 465 THR A 10 REMARK 465 ARG A 187 REMARK 465 ASP A 188 REMARK 465 GLY B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 VAL B 1 REMARK 465 SER B 2 REMARK 465 VAL B 3 REMARK 465 ALA B 4 REMARK 465 ALA B 5 REMARK 465 GLY B 6 REMARK 465 ASP B 7 REMARK 465 LYS B 8 REMARK 465 PRO B 9 REMARK 465 THR B 10 REMARK 465 ASP B 188 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 171 OE1 OE2 REMARK 470 HIS B 51 CB CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 88 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 175 CG GLU A 175 CD 0.096 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 77 28.98 -151.62 REMARK 500 ASN B 77 33.13 -155.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2193 DISTANCE = 6.10 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1187 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 181 OE2 REMARK 620 2 CIT A1189 O7 104.1 REMARK 620 3 CIT A1189 O5 179.8 76.1 REMARK 620 4 CIT A1189 O3 93.5 84.7 86.4 REMARK 620 5 HOH A2097 O 87.9 93.1 92.2 177.7 REMARK 620 6 HOH A2098 O 91.5 161.6 88.3 84.6 97.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1188 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 126 O REMARK 620 2 HOH B2052 O 125.6 REMARK 620 3 HOH B2141 O 110.2 118.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1189 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 181 OE2 REMARK 620 2 CIT B1190 O5 172.2 REMARK 620 3 CIT B1190 O7 111.2 76.4 REMARK 620 4 CIT B1190 O1 95.0 87.5 83.3 REMARK 620 5 HOH B2055 O 86.6 91.4 92.5 175.8 REMARK 620 6 HOH B2056 O 81.4 91.1 167.0 92.5 91.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1187 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1188 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 1189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1188 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT B 1190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1191 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4AC6 RELATED DB: PDB REMARK 900 CORYNEBACTERIUM GLUTAMICUM ACNR AU DERIVATIVE STRUCTURE REMARK 900 RELATED ID: 4AF5 RELATED DB: PDB REMARK 900 STRUCTURE OF THE C. GLUTAMICUM ACNR CRYSTAL FORM I DBREF 4ACI A 2 188 UNP Q8NQ97 ACNR_CORGL 2 188 DBREF 4ACI B 2 188 UNP Q8NQ97 ACNR_CORGL 2 188 SEQADV 4ACI GLY A -2 UNP Q8NQ97 EXPRESSION TAG SEQADV 4ACI HIS A -1 UNP Q8NQ97 EXPRESSION TAG SEQADV 4ACI MET A 0 UNP Q8NQ97 EXPRESSION TAG SEQADV 4ACI VAL A 1 UNP Q8NQ97 EXPRESSION TAG SEQADV 4ACI GLY B -2 UNP Q8NQ97 EXPRESSION TAG SEQADV 4ACI HIS B -1 UNP Q8NQ97 EXPRESSION TAG SEQADV 4ACI MET B 0 UNP Q8NQ97 EXPRESSION TAG SEQADV 4ACI VAL B 1 UNP Q8NQ97 EXPRESSION TAG SEQRES 1 A 191 GLY HIS MET VAL SER VAL ALA ALA GLY ASP LYS PRO THR SEQRES 2 A 191 ASN SER ARG GLN GLU ILE LEU GLU GLY ALA ARG ARG CYS SEQRES 3 A 191 PHE ALA GLU HIS GLY TYR GLU GLY ALA THR VAL ARG ARG SEQRES 4 A 191 LEU GLU GLU ALA THR GLY LYS SER ARG GLY ALA ILE PHE SEQRES 5 A 191 HIS HIS PHE GLY ASP LYS GLU ASN LEU PHE LEU ALA LEU SEQRES 6 A 191 ALA ARG GLU ASP ALA ALA ARG MET ALA GLU VAL VAL SER SEQRES 7 A 191 GLU ASN GLY LEU VAL GLU VAL MET ARG GLY MET LEU GLU SEQRES 8 A 191 ASP PRO GLU ARG TYR ASP TRP MET SER VAL ARG LEU GLU SEQRES 9 A 191 ILE SER LYS GLN LEU ARG THR ASP PRO VAL PHE ARG ALA SEQRES 10 A 191 LYS TRP ILE ASP HIS GLN SER VAL LEU ASP GLU ALA VAL SEQRES 11 A 191 ARG VAL ARG LEU SER ARG ASN VAL ASP LYS GLY GLN MET SEQRES 12 A 191 ARG THR ASP VAL PRO ILE GLU VAL LEU HIS THR PHE LEU SEQRES 13 A 191 GLU THR VAL LEU ASP GLY PHE ILE SER ARG LEU ALA THR SEQRES 14 A 191 GLY ALA SER THR GLU GLY LEU SER GLU VAL LEU ASP LEU SEQRES 15 A 191 VAL GLU GLY THR VAL ARG LYS ARG ASP SEQRES 1 B 191 GLY HIS MET VAL SER VAL ALA ALA GLY ASP LYS PRO THR SEQRES 2 B 191 ASN SER ARG GLN GLU ILE LEU GLU GLY ALA ARG ARG CYS SEQRES 3 B 191 PHE ALA GLU HIS GLY TYR GLU GLY ALA THR VAL ARG ARG SEQRES 4 B 191 LEU GLU GLU ALA THR GLY LYS SER ARG GLY ALA ILE PHE SEQRES 5 B 191 HIS HIS PHE GLY ASP LYS GLU ASN LEU PHE LEU ALA LEU SEQRES 6 B 191 ALA ARG GLU ASP ALA ALA ARG MET ALA GLU VAL VAL SER SEQRES 7 B 191 GLU ASN GLY LEU VAL GLU VAL MET ARG GLY MET LEU GLU SEQRES 8 B 191 ASP PRO GLU ARG TYR ASP TRP MET SER VAL ARG LEU GLU SEQRES 9 B 191 ILE SER LYS GLN LEU ARG THR ASP PRO VAL PHE ARG ALA SEQRES 10 B 191 LYS TRP ILE ASP HIS GLN SER VAL LEU ASP GLU ALA VAL SEQRES 11 B 191 ARG VAL ARG LEU SER ARG ASN VAL ASP LYS GLY GLN MET SEQRES 12 B 191 ARG THR ASP VAL PRO ILE GLU VAL LEU HIS THR PHE LEU SEQRES 13 B 191 GLU THR VAL LEU ASP GLY PHE ILE SER ARG LEU ALA THR SEQRES 14 B 191 GLY ALA SER THR GLU GLY LEU SER GLU VAL LEU ASP LEU SEQRES 15 B 191 VAL GLU GLY THR VAL ARG LYS ARG ASP HET MG A1187 1 HET GOL A1188 6 HET CIT A1189 13 HET NA B1188 1 HET MG B1189 1 HET CIT B1190 13 HET GOL B1191 6 HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETNAM CIT CITRIC ACID HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 MG 2(MG 2+) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 5 CIT 2(C6 H8 O7) FORMUL 6 NA NA 1+ FORMUL 10 HOH *348(H2 O) HELIX 1 1 ASN A 11 ALA A 32 1 22 HELIX 2 2 THR A 33 GLY A 42 1 10 HELIX 3 3 SER A 44 GLY A 53 1 10 HELIX 4 4 ASP A 54 ASP A 89 1 36 HELIX 5 5 ARG A 92 ILE A 102 1 11 HELIX 6 6 ILE A 102 ASP A 109 1 8 HELIX 7 7 ASP A 109 GLN A 120 1 12 HELIX 8 8 GLN A 120 LYS A 137 1 18 HELIX 9 9 PRO A 145 THR A 166 1 22 HELIX 10 10 GLY A 172 ARG A 185 1 14 HELIX 11 11 ASN B 11 GLY B 28 1 18 HELIX 12 12 THR B 33 GLY B 42 1 10 HELIX 13 13 SER B 44 HIS B 51 1 8 HELIX 14 14 ASP B 54 ASP B 89 1 36 HELIX 15 15 TYR B 93 MET B 96 5 4 HELIX 16 16 SER B 97 ILE B 102 1 6 HELIX 17 17 ILE B 102 ASP B 109 1 8 HELIX 18 18 ASP B 109 GLN B 120 1 12 HELIX 19 19 GLN B 120 LYS B 137 1 18 HELIX 20 20 PRO B 145 THR B 166 1 22 HELIX 21 21 GLY B 172 ARG B 185 1 14 LINK OE2 GLU A 181 MG MG A1187 1555 1555 2.08 LINK MG MG A1187 O7 CIT A1189 1555 1555 2.16 LINK MG MG A1187 O5 CIT A1189 1555 1555 2.15 LINK MG MG A1187 O3 CIT A1189 1555 1555 2.03 LINK MG MG A1187 O HOH A2097 1555 1555 2.05 LINK MG MG A1187 O HOH A2098 1555 1555 2.07 LINK O ALA B 126 NA NA B1188 1555 1555 2.77 LINK OE2 GLU B 181 MG MG B1189 1555 1555 1.92 LINK NA NA B1188 O HOH B2052 1555 1555 2.75 LINK NA NA B1188 O HOH B2141 1555 1555 2.74 LINK MG MG B1189 O5 CIT B1190 1555 1555 2.11 LINK MG MG B1189 O7 CIT B1190 1555 1555 2.18 LINK MG MG B1189 O1 CIT B1190 1555 1555 2.07 LINK MG MG B1189 O HOH B2055 1555 1555 2.08 LINK MG MG B1189 O HOH B2056 1555 1555 2.09 SITE 1 AC1 4 GLU A 181 CIT A1189 HOH A2097 HOH A2098 SITE 1 AC2 4 HIS A 27 ARG A 36 GLU A 39 HIS A 50 SITE 1 AC3 14 ASN A 77 GLY A 78 LEU A 79 VAL A 80 SITE 2 AC3 14 ARG A 130 ASN A 134 MET A 140 LEU A 153 SITE 3 AC3 14 GLU A 181 ARG A 185 MG A1187 HOH A2097 SITE 4 AC3 14 HOH A2098 HOH A2100 SITE 1 AC4 6 SER B 75 ALA B 126 VAL B 129 ARG B 130 SITE 2 AC4 6 HOH B2052 HOH B2141 SITE 1 AC5 4 GLU B 181 CIT B1190 HOH B2055 HOH B2056 SITE 1 AC6 13 ASN B 77 GLY B 78 LEU B 79 VAL B 80 SITE 2 AC6 13 ARG B 130 ASN B 134 LEU B 153 GLU B 181 SITE 3 AC6 13 ARG B 185 MG B1189 HOH B2055 HOH B2056 SITE 4 AC6 13 HOH B2142 SITE 1 AC7 5 ARG A 133 LYS A 137 HOH A3001 ARG B 128 SITE 2 AC7 5 GLU B 147 CRYST1 34.210 72.790 145.570 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029231 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013738 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006870 0.00000