HEADER MEMBRANE PROTEIN 19-JAN-12 4AFK TITLE IN MESO STRUCTURE OF ALGINATE TRANSPORTER, ALGE, FROM PSEUDOMONAS TITLE 2 AERUGINOSA, PAO1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALGINATE PRODUCTION PROTEIN ALGE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 33-490; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 ATCC: 15692; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET200 D TOPO; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: ALGE_PET200/D-TOPO; SOURCE 12 OTHER_DETAILS: HOLLOWAY COLLECTION KEYWDS MEMBRANE PROTEIN, OUTER MEMBRANE, LIPIDIC CUBIC PHASE, BETA BARREL EXPDTA X-RAY DIFFRACTION AUTHOR J.TAN,V.E.PYE,D.ARAGAO,M.CAFFREY REVDAT 8 07-FEB-24 4AFK 1 REMARK REVDAT 7 29-MAR-23 4AFK 1 AUTHOR REMARK HETSYN LINK REVDAT 6 22-MAY-19 4AFK 1 REMARK REVDAT 5 30-SEP-15 4AFK 1 JRNL REVDAT 4 13-AUG-14 4AFK 1 JRNL REVDAT 3 06-AUG-14 4AFK 1 JRNL REVDAT 2 30-JUL-14 4AFK 1 JRNL REVDAT 1 06-FEB-13 4AFK 0 JRNL AUTH J.TAN,S.L.ROUSE,D.LI,V.E.PYE,L.VOGELEY,A.R.BRINTH, JRNL AUTH 2 T.EL ARNAOUT,J.C.WHITNEY,P.L.HOWELL,M.S.P.SANSOM,M.CAFFREY JRNL TITL A CONFORMATIONAL LANDSCAPE FOR ALGINATE SECRETION ACROSS THE JRNL TITL 2 OUTER MEMBRANE OF PSEUDOMONAS AERUGINOSA. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 2054 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 25084326 JRNL DOI 10.1107/S1399004714001850 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 35580 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1788 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.7712 - 4.4456 1.00 2814 150 0.1763 0.1942 REMARK 3 2 4.4456 - 3.5352 1.00 2770 155 0.1543 0.1976 REMARK 3 3 3.5352 - 3.0902 1.00 2736 160 0.1601 0.2039 REMARK 3 4 3.0902 - 2.8085 0.99 2734 141 0.1646 0.1917 REMARK 3 5 2.8085 - 2.6077 0.99 2688 143 0.1633 0.2182 REMARK 3 6 2.6077 - 2.4543 0.98 2719 138 0.1547 0.1984 REMARK 3 7 2.4543 - 2.3315 0.97 2674 161 0.1566 0.2297 REMARK 3 8 2.3315 - 2.2302 0.97 2647 137 0.1582 0.2298 REMARK 3 9 2.2302 - 2.1444 0.95 2615 130 0.1533 0.1961 REMARK 3 10 2.1444 - 2.0705 0.94 2591 122 0.1574 0.2280 REMARK 3 11 2.0705 - 2.0059 0.91 2526 124 0.1611 0.2108 REMARK 3 12 2.0059 - 1.9486 0.86 2306 129 0.1739 0.2219 REMARK 3 13 1.9486 - 1.8973 0.71 1972 98 0.2185 0.3114 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.61 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 59.83 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.03590 REMARK 3 B22 (A**2) : 2.21850 REMARK 3 B33 (A**2) : -3.25440 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.74680 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3898 REMARK 3 ANGLE : 1.344 5199 REMARK 3 CHIRALITY : 0.099 508 REMARK 3 PLANARITY : 0.005 669 REMARK 3 DIHEDRAL : 19.379 1523 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 37:118) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6627 -8.1154 32.6708 REMARK 3 T TENSOR REMARK 3 T11: 0.0106 T22: 0.0250 REMARK 3 T33: 0.0705 T12: -0.0739 REMARK 3 T13: -0.0291 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.2982 L22: 0.3297 REMARK 3 L33: 0.0512 L12: 0.0388 REMARK 3 L13: -0.0508 L23: 0.0809 REMARK 3 S TENSOR REMARK 3 S11: 0.1473 S12: 0.0640 S13: -0.0011 REMARK 3 S21: -0.0113 S22: -0.1318 S23: 0.1254 REMARK 3 S31: -0.1201 S32: 0.0579 S33: -0.0085 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 119:232) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1401 -14.2823 33.0461 REMARK 3 T TENSOR REMARK 3 T11: 0.0580 T22: 0.0504 REMARK 3 T33: 0.0567 T12: -0.0023 REMARK 3 T13: -0.0100 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.3597 L22: 0.2654 REMARK 3 L33: 0.1383 L12: 0.1055 REMARK 3 L13: -0.1073 L23: -0.1465 REMARK 3 S TENSOR REMARK 3 S11: 0.0236 S12: 0.0117 S13: 0.0035 REMARK 3 S21: 0.0486 S22: -0.0222 S23: -0.0050 REMARK 3 S31: -0.0067 S32: -0.0020 S33: -0.0070 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 233:313) REMARK 3 ORIGIN FOR THE GROUP (A): 24.8815 -6.1799 19.1723 REMARK 3 T TENSOR REMARK 3 T11: 0.0736 T22: 0.1458 REMARK 3 T33: 0.0708 T12: -0.0201 REMARK 3 T13: 0.0094 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 0.1973 L22: 0.2544 REMARK 3 L33: 0.1049 L12: 0.0740 REMARK 3 L13: -0.1401 L23: -0.1089 REMARK 3 S TENSOR REMARK 3 S11: 0.0194 S12: 0.1120 S13: -0.0215 REMARK 3 S21: 0.0175 S22: -0.0262 S23: -0.0344 REMARK 3 S31: 0.1142 S32: -0.1331 S33: -0.0194 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 314:490) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5885 7.3036 28.9381 REMARK 3 T TENSOR REMARK 3 T11: 0.0380 T22: 0.0174 REMARK 3 T33: 0.0244 T12: -0.0105 REMARK 3 T13: 0.0045 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 0.5584 L22: 0.3755 REMARK 3 L33: 0.1618 L12: 0.0253 REMARK 3 L13: -0.0431 L23: 0.0740 REMARK 3 S TENSOR REMARK 3 S11: 0.0174 S12: 0.0205 S13: 0.0147 REMARK 3 S21: -0.0290 S22: -0.0070 S23: 0.0145 REMARK 3 S31: -0.0268 S32: -0.0100 S33: -0.0082 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4AFK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1290050989. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37703 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 113.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.35000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3RBH REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL, PH 7.5, 0.1 M SODIUM REMARK 280 CITRATE, 18 %(W/V) PEG 400. PROTEIN WAS MIXED WITH 7.8 MAG AT REMARK 280 RATIO 1:1 (W:W) TO FORM CUBIC PHASE., LIPIDIC CUBIC PHASE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 28.62650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.20800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 28.62650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.20800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 33 REMARK 465 ASN A 34 REMARK 465 SER A 35 REMARK 465 GLY A 36 REMARK 465 ASP A 109 REMARK 465 ASP A 110 REMARK 465 GLY A 111 REMARK 465 ASN A 112 REMARK 465 ASN A 113 REMARK 465 SER A 114 REMARK 465 ARG A 115 REMARK 465 ASN A 116 REMARK 465 LYS A 439 REMARK 465 GLN A 440 REMARK 465 GLY A 441 REMARK 465 LEU A 442 REMARK 465 LEU A 443 REMARK 465 PRO A 444 REMARK 465 ALA A 445 REMARK 465 SER A 446 REMARK 465 MET A 447 REMARK 465 SER A 448 REMARK 465 GLN A 449 REMARK 465 TYR A 450 REMARK 465 VAL A 451 REMARK 465 ASP A 452 REMARK 465 GLU A 453 REMARK 465 PRO A 454 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN A 303 NE2 GLN A 303 2655 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 54 110.38 -170.29 REMARK 500 ASN A 67 84.43 -154.44 REMARK 500 ASP A 162 80.97 -162.91 REMARK 500 ASP A 321 -157.85 -150.75 REMARK 500 ASN A 355 39.81 -85.24 REMARK 500 ARG A 389 -129.31 45.50 REMARK 500 ASN A 416 78.44 -109.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL (PE5): PEG 400 REMARK 600 LAURYL DIMETHYLAMINE-N-OXIDE (LDA): SOME LDA MOLECULES REMARK 600 HAVE NOT HAD HEAD GROUPS FITTED AS NO ELECTRON DENSITY, REMARK 600 ALKANE CHAINS WERE MODELLED WHERE WE WERE UNABLE TO REMARK 600 DISTINGUISH BETWEEN LADO AND 7.8 MAG. REMARK 600 INCLUSION OF THE TAILS FIT INTO DENSITY AND REDUCES REMARK 600 FREE R FACTOR BY 1.2 PERCENT. REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 LDA A 1495 REMARK 610 LDA A 1497 REMARK 610 LDA A 1498 REMARK 610 LDA A 1499 REMARK 610 LDA A 1500 REMARK 610 LDA A 1501 REMARK 610 LDA A 1502 REMARK 610 LDA A 1503 REMARK 610 LDA A 1504 REMARK 610 LDA A 1505 REMARK 610 LDA A 1506 REMARK 610 PE5 A 1516 REMARK 610 PE5 A 1517 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1509 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 55 OD1 REMARK 620 2 ASP A 55 OD2 46.1 REMARK 620 3 ASP A 57 OD2 74.2 112.8 REMARK 620 4 ASP A 57 OD1 67.9 81.4 44.5 REMARK 620 5 ALA A 61 O 151.0 125.6 90.5 83.9 REMARK 620 6 GLY A 63 O 95.3 107.2 105.6 147.7 112.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1507 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 136 O REMARK 620 2 THR A 139 O 78.4 REMARK 620 3 TYR A 141 O 153.3 100.6 REMARK 620 4 GLU A 144 O 101.7 157.3 89.4 REMARK 620 5 GLU A 144 OE1 97.8 79.7 108.4 77.8 REMARK 620 6 HOH A2064 O 74.7 89.9 78.6 112.2 168.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1508 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 273 OD1 REMARK 620 2 ARG A 317 NH2 57.8 REMARK 620 3 ARG A 317 NE 76.5 44.2 REMARK 620 4 ASN A 319 OD1 77.5 116.4 85.8 REMARK 620 5 LYS A 325 NZ 148.5 153.7 124.9 81.2 REMARK 620 N 1 2 3 4 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 18-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 19-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M A 1510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78N A 1511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M A 1512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78N A 1513 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78N A 1514 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M A 1515 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1492 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1493 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1494 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1495 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1496 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1497 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1498 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1499 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1500 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1503 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1505 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 1506 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FLC A 1491 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1507 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1508 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1509 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE5 A 1516 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE5 A 1517 DBREF 4AFK A 33 490 UNP P18895 ALGE_PSEAE 33 490 SEQRES 1 A 458 ALA ASN SER GLY GLU ALA PRO LYS ASN PHE GLY LEU ASP SEQRES 2 A 458 VAL LYS ILE THR GLY GLU SER GLU ASN ASP ARG ASP LEU SEQRES 3 A 458 GLY THR ALA PRO GLY GLY THR LEU ASN ASP ILE GLY ILE SEQRES 4 A 458 ASP LEU ARG PRO TRP ALA PHE GLY GLN TRP GLY ASP TRP SEQRES 5 A 458 SER ALA TYR PHE MET GLY GLN ALA VAL ALA ALA THR ASP SEQRES 6 A 458 THR ILE GLU THR ASP THR LEU GLN SER ASP THR ASP ASP SEQRES 7 A 458 GLY ASN ASN SER ARG ASN ASP GLY ARG GLU PRO ASP LYS SEQRES 8 A 458 SER TYR LEU ALA ALA ARG GLU PHE TRP VAL ASP TYR ALA SEQRES 9 A 458 GLY LEU THR ALA TYR PRO GLY GLU HIS LEU ARG PHE GLY SEQRES 10 A 458 ARG GLN ARG LEU ARG GLU ASP SER GLY GLN TRP GLN ASP SEQRES 11 A 458 THR ASN ILE GLU ALA LEU ASN TRP SER PHE GLU THR THR SEQRES 12 A 458 LEU LEU ASN ALA HIS ALA GLY VAL ALA GLN ARG PHE SER SEQRES 13 A 458 GLU TYR ARG THR ASP LEU ASP GLU LEU ALA PRO GLU ASP SEQRES 14 A 458 LYS ASP ARG THR HIS VAL PHE GLY ASP ILE SER THR GLN SEQRES 15 A 458 TRP ALA PRO HIS HIS ARG ILE GLY VAL ARG ILE HIS HIS SEQRES 16 A 458 ALA ASP ASP SER GLY HIS LEU ARG ARG PRO GLY GLU GLU SEQRES 17 A 458 VAL ASP ASN LEU ASP LYS THR TYR THR GLY GLN LEU THR SEQRES 18 A 458 TRP LEU GLY ILE GLU ALA THR GLY ASP ALA TYR ASN TYR SEQRES 19 A 458 ARG SER SER MET PRO LEU ASN TYR TRP ALA SER ALA THR SEQRES 20 A 458 TRP LEU THR GLY ASP ARG ASP ASN LEU THR THR THR THR SEQRES 21 A 458 VAL ASP ASP ARG ARG ILE ALA THR GLY LYS GLN SER GLY SEQRES 22 A 458 ASP VAL ASN ALA PHE GLY VAL ASP LEU GLY LEU ARG TRP SEQRES 23 A 458 ASN ILE ASP GLU GLN TRP LYS ALA GLY VAL GLY TYR ALA SEQRES 24 A 458 ARG GLY SER GLY GLY GLY LYS ASP GLY GLU GLU GLN PHE SEQRES 25 A 458 GLN GLN THR GLY LEU GLU SER ASN ARG SER ASN PHE THR SEQRES 26 A 458 GLY THR ARG SER ARG VAL HIS ARG PHE GLY GLU ALA PHE SEQRES 27 A 458 ARG GLY GLU LEU SER ASN LEU GLN ALA ALA THR LEU PHE SEQRES 28 A 458 GLY SER TRP GLN LEU ARG GLU ASP TYR ASP ALA SER LEU SEQRES 29 A 458 VAL TYR HIS LYS PHE TRP ARG VAL ASP ASP ASP SER ASP SEQRES 30 A 458 ILE GLY THR SER GLY ILE ASN ALA ALA LEU GLN PRO GLY SEQRES 31 A 458 GLU LYS ASP ILE GLY GLN GLU LEU ASP LEU VAL VAL THR SEQRES 32 A 458 LYS TYR PHE LYS GLN GLY LEU LEU PRO ALA SER MET SER SEQRES 33 A 458 GLN TYR VAL ASP GLU PRO SER ALA LEU ILE ARG PHE ARG SEQRES 34 A 458 GLY GLY LEU PHE LYS PRO GLY ASP ALA TYR GLY PRO GLY SEQRES 35 A 458 THR ASP SER THR MET HIS ARG ALA PHE VAL ASP PHE ILE SEQRES 36 A 458 TRP ARG PHE HET CA A1509 1 HET FLC A1491 13 HET LDA A1492 16 HET LDA A1493 16 HET LDA A1494 16 HET LDA A1495 11 HET LDA A1496 16 HET LDA A1497 13 HET LDA A1498 9 HET LDA A1499 10 HET LDA A1500 12 HET LDA A1501 8 HET LDA A1502 7 HET LDA A1503 9 HET LDA A1504 9 HET LDA A1505 8 HET LDA A1506 11 HET NA A1507 1 HET NA A1508 1 HET 78M A1510 22 HET 78N A1511 22 HET 78M A1512 22 HET 78N A1513 22 HET 78N A1514 22 HET 78M A1515 22 HET PE5 A1516 15 HET PE5 A1517 8 HETNAM CA CALCIUM ION HETNAM FLC CITRATE ANION HETNAM LDA LAURYL DIMETHYLAMINE-N-OXIDE HETNAM NA SODIUM ION HETNAM 78M (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE HETNAM 78N (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE HETNAM PE5 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL HETSYN 78M 7.8 MONOACYLGLYCEROL HETSYN 78N 7.8 MONOACYLGLYCEROL (2R) HETSYN PE5 2-(2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}- HETSYN 2 PE5 ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL; POLYETHYLENE HETSYN 3 PE5 GLYCOL PEG400 FORMUL 2 CA CA 2+ FORMUL 3 FLC C6 H5 O7 3- FORMUL 4 LDA 15(C14 H31 N O) FORMUL 19 NA 2(NA 1+) FORMUL 21 78M 3(C18 H34 O4) FORMUL 22 78N 3(C18 H34 O4) FORMUL 27 PE5 2(C18 H38 O9) FORMUL 29 HOH *242(H2 O) HELIX 1 1 GLY A 337 GLU A 341 5 5 SHEET 1 AA19 PHE A 42 ASN A 54 0 SHEET 2 AA19 LEU A 66 TRP A 81 -1 O LEU A 66 N GLU A 53 SHEET 3 AA19 TRP A 84 ALA A 95 -1 O TRP A 84 N TRP A 81 SHEET 4 AA19 SER A 124 TYR A 135 -1 O TYR A 125 N VAL A 93 SHEET 5 AA19 GLU A 144 ARG A 154 -1 O LEU A 146 N TYR A 135 SHEET 6 AA19 ASP A 162 GLU A 173 -1 O THR A 163 N LEU A 153 SHEET 7 AA19 LEU A 177 GLN A 185 -1 O ALA A 179 N PHE A 172 SHEET 8 AA19 ARG A 204 ALA A 216 -1 O HIS A 206 N ALA A 184 SHEET 9 AA19 HIS A 219 ASP A 230 -1 O HIS A 219 N TRP A 215 SHEET 10 AA19 TYR A 248 GLY A 261 -1 O GLY A 250 N ASP A 230 SHEET 11 AA19 LEU A 272 THR A 292 -1 O TYR A 274 N GLY A 261 SHEET 12 AA19 ARG A 297 ASN A 319 -1 O ILE A 298 N THR A 291 SHEET 13 AA19 TRP A 324 GLY A 333 -1 O ALA A 326 N TRP A 318 SHEET 14 AA19 LEU A 377 LEU A 388 -1 O LEU A 377 N GLY A 333 SHEET 15 AA19 TYR A 392 ARG A 403 -1 O TYR A 392 N LEU A 388 SHEET 16 AA19 ASP A 425 TYR A 437 -1 O GLY A 427 N PHE A 401 SHEET 17 AA19 LEU A 457 PRO A 467 -1 O ILE A 458 N LYS A 436 SHEET 18 AA19 MET A 479 ARG A 489 -1 O MET A 479 N PHE A 465 SHEET 19 AA19 PHE A 42 ASN A 54 -1 O VAL A 46 N TRP A 488 SHEET 1 AB 2 ARG A 353 SER A 354 0 SHEET 2 AB 2 VAL A 363 HIS A 364 -1 O VAL A 363 N SER A 354 LINK OD1 ASP A 55 CA CA A1509 1555 1555 3.02 LINK OD2 ASP A 55 CA CA A1509 1555 1555 2.53 LINK OD2 ASP A 57 CA CA A1509 1555 1555 3.04 LINK OD1 ASP A 57 CA CA A1509 1555 1555 2.75 LINK O ALA A 61 CA CA A1509 1555 1555 2.59 LINK O GLY A 63 CA CA A1509 1555 1555 2.53 LINK O ALA A 136 NA NA A1507 1555 1555 2.45 LINK O THR A 139 NA NA A1507 1555 1555 2.68 LINK O TYR A 141 NA NA A1507 1555 1555 2.56 LINK O GLU A 144 NA NA A1507 1555 1555 2.47 LINK OE1 GLU A 144 NA NA A1507 1555 1555 2.66 LINK OD1 ASN A 273 NA NA A1508 1555 1555 3.07 LINK NH2 ARG A 317 NA NA A1508 1555 1555 3.11 LINK NE ARG A 317 NA NA A1508 1555 1555 2.95 LINK OD1 ASN A 319 NA NA A1508 1555 1555 3.01 LINK NZ LYS A 325 NA NA A1508 1555 1555 2.99 LINK NA NA A1507 O HOH A2064 1555 1555 2.72 CISPEP 1 ASN A 54 ASP A 55 0 -1.64 SITE 1 AC1 11 TRP A 81 TYR A 87 PHE A 88 PHE A 148 SITE 2 AC1 11 HIS A 219 MET A 270 PRO A 271 LEU A 272 SITE 3 AC1 11 TYR A 274 78N A1513 HOH A2003 SITE 1 AC2 6 SER A 188 GLY A 315 VAL A 328 TYR A 330 SITE 2 AC2 6 LDA A1496 78N A1513 SITE 1 AC3 9 TRP A 170 VAL A 207 PHE A 208 HIS A 227 SITE 2 AC3 9 THR A 253 LEU A 432 LEU A 464 THR A 478 SITE 3 AC3 9 78M A1515 SITE 1 AC4 8 TRP A 81 PHE A 148 TRP A 215 HIS A 219 SITE 2 AC4 8 LDA A1497 78M A1510 78N A1511 HOH A2131 SITE 1 AC5 4 THR A 139 ALA A 140 TYR A 392 ILE A 458 SITE 1 AC6 10 ASN A 54 ASP A 229 LEU A 430 GLY A 462 SITE 2 AC6 10 GLY A 463 LEU A 464 THR A 478 HIS A 480 SITE 3 AC6 10 LDA A1494 78M A1512 SITE 1 AC7 2 PRO A 75 TRP A 318 SITE 1 AC8 5 ASN A 67 ASP A 68 THR A 96 LDA A1494 SITE 2 AC8 5 HOH A2240 SITE 1 AC9 7 ASN A 54 GLY A 182 THR A 205 ASP A 229 SITE 2 AC9 7 HIS A 480 LDA A1493 78M A1515 SITE 1 BC1 3 ALA A 94 ALA A 95 HOH A2241 SITE 1 BC2 9 GLN A 91 ALA A 127 ARG A 191 LEU A 194 SITE 2 BC2 9 ASP A 195 GLN A 378 TRP A 402 78N A1511 SITE 3 BC2 9 HOH A2110 SITE 1 BC3 5 TRP A 280 PHE A 310 LDA A1500 78N A1513 SITE 2 BC3 5 HOH A2242 SITE 1 BC4 2 ASP A 210 ILE A 211 SITE 1 BC5 2 TRP A 386 ALA A 394 SITE 1 BC6 3 ALA A 278 VAL A 312 LDA A1497 SITE 1 BC7 2 VAL A 484 PHE A 486 SITE 1 BC8 1 LDA A1505 SITE 1 BC9 1 TRP A 215 SITE 1 CC1 3 TYR A 398 LYS A 400 LDA A1502 SITE 1 CC2 3 PHE A 148 ALA A 167 GLN A 185 SITE 1 CC3 7 LYS A 47 ARG A 74 THR A 101 ASP A 102 SITE 2 CC3 7 THR A 103 ARG A 152 HOH A2041 SITE 1 CC4 5 ALA A 136 THR A 139 TYR A 141 GLU A 144 SITE 2 CC4 5 HOH A2064 SITE 1 CC5 5 ASN A 265 ASN A 273 ARG A 317 ASN A 319 SITE 2 CC5 5 LYS A 325 SITE 1 CC6 5 ASP A 55 ASP A 57 ALA A 61 PRO A 62 SITE 2 CC6 5 GLY A 63 SITE 1 CC7 9 ARG A 285 ASN A 287 GLN A 303 GLY A 305 SITE 2 CC7 9 ASP A 339 GLY A 340 GLN A 343 HOH A2163 SITE 3 CC7 9 HOH A2190 SITE 1 CC8 8 GLN A 159 TRP A 160 TRP A 254 SER A 277 SITE 2 CC8 8 THR A 279 GLY A 311 GLN A 346 THR A 347 CRYST1 57.253 74.416 115.529 90.00 101.56 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017466 0.000000 0.003573 0.00000 SCALE2 0.000000 0.013438 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008835 0.00000