HEADER SUGAR BINDING PROTEIN 07-FEB-12 4AHY TITLE FLO5A COCRYSTALLIZED WITH 3 MM GDAC3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLOCCULATION PROTEIN FLO5; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LECTIN-LIKE DOMAIN RESIDUES 23-271; COMPND 5 SYNONYM: FLOCCULIN-5 FL05A; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE S288C; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 ATCC: 204508; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: ORIGAMI 2; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_VECTOR: PET28A KEYWDS SUGAR BINDING PROTEIN, GADOLINIUM, CLUSTER, ADHESIN EXPDTA X-RAY DIFFRACTION AUTHOR M.VEELDERS,L.-O.ESSEN REVDAT 4 20-DEC-23 4AHY 1 REMARK LINK REVDAT 3 28-JUN-17 4AHY 1 REMARK REVDAT 2 31-OCT-12 4AHY 1 JRNL REVDAT 1 03-OCT-12 4AHY 0 JRNL AUTH M.VEELDERS,L.-O.ESSEN JRNL TITL COMPLEX GADOLINIUM-OXO CLUSTERS FORMED ALONG CONCAVE PROTEIN JRNL TITL 2 SURFACES. JRNL REF CHEMBIOCHEM V. 13 2187 2012 JRNL REFN ISSN 1439-4227 JRNL PMID 22936626 JRNL DOI 10.1002/CBIC.201200441 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 32216 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.800 REMARK 3 FREE R VALUE TEST SET COUNT : 596 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2368 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.2790 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.2500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1936 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 302 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.24000 REMARK 3 B22 (A**2) : 2.26000 REMARK 3 B33 (A**2) : -1.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.103 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.103 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.308 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2114 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2904 ; 1.458 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 282 ; 5.614 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;33.855 ;25.465 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 298 ;12.488 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ; 8.383 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 312 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1670 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1353 ; 0.576 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2193 ; 1.037 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 761 ; 1.466 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 706 ; 2.264 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4AHY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1290051172. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR591 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : OSMIC MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43091 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 19.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 2XJP REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM BISTRIS PROPANE, 500 MM NACL, 3 REMARK 280 MM GDAC3, 20% PEG4000, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.15000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.04000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.88000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.04000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.15000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.88000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 18 CG CD NE CZ NH1 NH2 REMARK 470 MET A 22 CG SD CE REMARK 470 ASP A 197 CG OD1 OD2 REMARK 470 SER A 199 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 108 O PRO A 268 3755 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 62 -27.43 -151.52 REMARK 500 ILE A 171 -57.50 -124.44 REMARK 500 PHE A 173 -178.49 -172.38 REMARK 500 SER A 199 -154.59 -128.90 REMARK 500 LEU A 200 85.41 81.55 REMARK 500 PRO A 201 172.07 -59.52 REMARK 500 SER A 227 -127.38 43.27 REMARK 500 LEU A 231 84.18 -154.47 REMARK 500 ASP A 245 -60.79 70.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2006 DISTANCE = 6.01 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 GD A1272 GD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 161 OD1 REMARK 620 2 ASP A 161 OD2 42.5 REMARK 620 3 ASN A 224 OD1 83.5 64.9 REMARK 620 4 VAL A 226 O 142.7 101.1 86.3 REMARK 620 5 TRP A 228 O 120.1 146.9 87.8 95.1 REMARK 620 6 HOH A2269 O 103.5 112.7 166.7 81.3 98.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GD A 1272 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1273 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1274 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XJP RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE FLOCCULIN FLO5 FROM REMARK 900 SACCHAROMYCES CEREVISIAE IN COMPLEX WITH CALCIUM AND MANNOSE REMARK 900 RELATED ID: 2XJQ RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE FLOCCULIN FLO5 FROM REMARK 900 SACCHAROMYCES CEREVISIAE REMARK 900 RELATED ID: 2XJR RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE FLOCCULIN FLO5 FROM REMARK 900 SACCHAROMYCES CEREVISIAE IN COMPLEX WITH CALCIUM AND MAN5(D2-D3) REMARK 900 RELATED ID: 2XJS RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE FLOCCULIN FLO5 FROM REMARK 900 SACCHAROMYCES CEREVISIAE IN COMPLEX WITH CALCIUM AND A1,2-MANNOBIOSE REMARK 900 RELATED ID: 2XJT RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE FLOCCULIN FLO5 FROM REMARK 900 SACCHAROMYCES CEREVISIAE IN COMPLEX WITH CALCIUM AND MAN5(D1) REMARK 900 RELATED ID: 2XJU RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE FLOCCULIN FLO5 FROM REMARK 900 SACCHAROMYCES CEREVISIAE WITH MUTATION S227A IN COMPLEX WITH REMARK 900 CALCIUM AND A1,2-MANNOBIOSE REMARK 900 RELATED ID: 2XJV RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF THE FLOCCULIN FLO5 FROM REMARK 900 SACCHAROMYCES CEREVISIAE WITH MUTATION D201T IN COMPLEX WITH REMARK 900 CALCIUM AND GLUCOSE REMARK 900 RELATED ID: 4AHW RELATED DB: PDB REMARK 900 FLO5A SHOWING A HEPTANUCLEAR GADOLINIUM CLUSTER ON ITS SURFACE REMARK 900 RELATED ID: 4AHX RELATED DB: PDB REMARK 900 FLO5A SHOWING A TRINUCLEAR GADOLINIUM CLUSTER ON ITS SURFACE REMARK 900 RELATED ID: 4AHZ RELATED DB: PDB REMARK 900 FLO5A SHOWING A HEPTANUCLEAR GADOLINIUM CLUSTER ON ITS SURFACE REMARK 900 AFTER 60 MIN OF SOAKING REMARK 900 RELATED ID: 4AI0 RELATED DB: PDB REMARK 900 FLO5A SHOWING A HEPTANUCLEAR GADOLINIUM CLUSTER ON ITS SURFACE REMARK 900 AFTER 9 MIN OF SOAKING REMARK 900 RELATED ID: 4AI1 RELATED DB: PDB REMARK 900 FLO5A SHOWING A HEPTANUCLEAR GADOLINIUM CLUSTER ON ITS SURFACE REMARK 900 AFTER 19 MIN OF SOAKING REMARK 900 RELATED ID: 4AI2 RELATED DB: PDB REMARK 900 FLO5A SHOWING A HEPTANUCLEAR GADOLINIUM CLUSTER ON ITS SURFACE REMARK 900 AFTER 41 MIN OF SOAKING REMARK 900 RELATED ID: 4AI3 RELATED DB: PDB REMARK 900 FLO5A SHOWING A HEPTANUCLEAR GADOLINIUM CLUSTER ON ITS SURFACE REMARK 900 AFTER 60 MIN OF SOAKING DBREF 4AHY A 23 271 UNP P38894 FLO5_YEAST 23 271 SEQADV 4AHY MET A 2 UNP P38894 EXPRESSION TAG SEQADV 4AHY GLY A 3 UNP P38894 EXPRESSION TAG SEQADV 4AHY SER A 4 UNP P38894 EXPRESSION TAG SEQADV 4AHY SER A 5 UNP P38894 EXPRESSION TAG SEQADV 4AHY HIS A 6 UNP P38894 EXPRESSION TAG SEQADV 4AHY HIS A 7 UNP P38894 EXPRESSION TAG SEQADV 4AHY HIS A 8 UNP P38894 EXPRESSION TAG SEQADV 4AHY HIS A 9 UNP P38894 EXPRESSION TAG SEQADV 4AHY HIS A 10 UNP P38894 EXPRESSION TAG SEQADV 4AHY HIS A 11 UNP P38894 EXPRESSION TAG SEQADV 4AHY SER A 12 UNP P38894 EXPRESSION TAG SEQADV 4AHY SER A 13 UNP P38894 EXPRESSION TAG SEQADV 4AHY GLY A 14 UNP P38894 EXPRESSION TAG SEQADV 4AHY LEU A 15 UNP P38894 EXPRESSION TAG SEQADV 4AHY VAL A 16 UNP P38894 EXPRESSION TAG SEQADV 4AHY PRO A 17 UNP P38894 EXPRESSION TAG SEQADV 4AHY ARG A 18 UNP P38894 EXPRESSION TAG SEQADV 4AHY GLY A 19 UNP P38894 EXPRESSION TAG SEQADV 4AHY SER A 20 UNP P38894 EXPRESSION TAG SEQADV 4AHY HIS A 21 UNP P38894 EXPRESSION TAG SEQADV 4AHY MET A 22 UNP P38894 EXPRESSION TAG SEQRES 1 A 270 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 270 LEU VAL PRO ARG GLY SER HIS MET SER GLY ALA THR GLU SEQRES 3 A 270 ALA CYS LEU PRO ALA GLY GLN ARG LYS SER GLY MET ASN SEQRES 4 A 270 ILE ASN PHE TYR GLN TYR SER LEU LYS ASP SER SER THR SEQRES 5 A 270 TYR SER ASN ALA ALA TYR MET ALA TYR GLY TYR ALA SER SEQRES 6 A 270 LYS THR LYS LEU GLY SER VAL GLY GLY GLN THR ASP ILE SEQRES 7 A 270 SER ILE ASP TYR ASN ILE PRO CYS VAL SER SER SER GLY SEQRES 8 A 270 THR PHE PRO CYS PRO GLN GLU ASP SER TYR GLY ASN TRP SEQRES 9 A 270 GLY CYS LYS GLY MET GLY ALA CYS SER ASN SER GLN GLY SEQRES 10 A 270 ILE ALA TYR TRP SER THR ASP LEU PHE GLY PHE TYR THR SEQRES 11 A 270 THR PRO THR ASN VAL THR LEU GLU MET THR GLY TYR PHE SEQRES 12 A 270 LEU PRO PRO GLN THR GLY SER TYR THR PHE SER PHE ALA SEQRES 13 A 270 THR VAL ASP ASP SER ALA ILE LEU SER VAL GLY GLY SER SEQRES 14 A 270 ILE ALA PHE GLU CYS CYS ALA GLN GLU GLN PRO PRO ILE SEQRES 15 A 270 THR SER THR ASN PHE THR ILE ASN GLY ILE LYS PRO TRP SEQRES 16 A 270 ASP GLY SER LEU PRO ASP ASN ILE THR GLY THR VAL TYR SEQRES 17 A 270 MET TYR ALA GLY TYR TYR TYR PRO LEU LYS VAL VAL TYR SEQRES 18 A 270 SER ASN ALA VAL SER TRP GLY THR LEU PRO ILE SER VAL SEQRES 19 A 270 GLU LEU PRO ASP GLY THR THR VAL SER ASP ASN PHE GLU SEQRES 20 A 270 GLY TYR VAL TYR SER PHE ASP ASP ASP LEU SER GLN SER SEQRES 21 A 270 ASN CYS THR ILE PRO ASP PRO SER ILE HIS HET GD A1272 1 HET CL A1273 1 HET CL A1274 1 HETNAM GD GADOLINIUM ATOM HETNAM CL CHLORIDE ION FORMUL 2 GD GD FORMUL 3 CL 2(CL 1-) FORMUL 5 HOH *302(H2 O) HELIX 1 1 SER A 20 GLY A 24 5 5 HELIX 2 2 SER A 52 SER A 55 5 4 HELIX 3 3 ASN A 56 TYR A 62 1 7 HELIX 4 4 GLY A 63 LYS A 67 5 5 HELIX 5 5 PRO A 97 GLU A 99 5 3 SHEET 1 AA 2 ALA A 28 CYS A 29 0 SHEET 2 AA 2 THR A 264 ILE A 265 -1 O ILE A 265 N ALA A 28 SHEET 1 AB 6 LYS A 36 SER A 37 0 SHEET 2 AB 6 VAL A 251 SER A 253 -1 O SER A 253 N LYS A 36 SHEET 3 AB 6 VAL A 136 PHE A 144 1 O TYR A 143 N TYR A 252 SHEET 4 AB 6 TYR A 216 ASN A 224 -1 O TYR A 216 N PHE A 144 SHEET 5 AB 6 SER A 162 VAL A 167 -1 O SER A 162 N SER A 223 SHEET 6 AB 6 ILE A 190 GLY A 192 -1 O ILE A 190 N LEU A 165 SHEET 1 AC 5 LYS A 36 SER A 37 0 SHEET 2 AC 5 VAL A 251 SER A 253 -1 O SER A 253 N LYS A 36 SHEET 3 AC 5 VAL A 136 PHE A 144 1 O TYR A 143 N TYR A 252 SHEET 4 AC 5 MET A 39 TYR A 44 -1 O ASN A 40 N THR A 141 SHEET 5 AC 5 LYS A 69 GLN A 76 -1 N LEU A 70 O PHE A 43 SHEET 1 AD 2 ILE A 81 TYR A 83 0 SHEET 2 AD 2 GLY A 229 LEU A 231 -1 O GLY A 229 N TYR A 83 SHEET 1 AE 2 PRO A 86 SER A 89 0 SHEET 2 AE 2 GLY A 92 PRO A 95 -1 O GLY A 92 N SER A 89 SHEET 1 AF 3 SER A 101 TYR A 102 0 SHEET 2 AF 3 GLY A 106 CYS A 107 -1 O GLY A 106 N TYR A 102 SHEET 3 AF 3 GLY A 111 ALA A 112 -1 O GLY A 111 N CYS A 107 SHEET 1 AG 4 ILE A 204 MET A 210 0 SHEET 2 AG 4 GLY A 150 PHE A 156 -1 O GLY A 150 N MET A 210 SHEET 3 AG 4 ILE A 233 GLU A 236 -1 O SER A 234 N SER A 155 SHEET 4 AG 4 THR A 242 SER A 244 -1 O VAL A 243 N VAL A 235 SSBOND 1 CYS A 29 CYS A 175 1555 1555 2.04 SSBOND 2 CYS A 87 CYS A 113 1555 1555 2.02 SSBOND 3 CYS A 96 CYS A 107 1555 1555 2.03 SSBOND 4 CYS A 176 CYS A 263 1555 1555 2.03 LINK OD1 ASP A 161 GD GD A1272 1555 1555 2.36 LINK OD2 ASP A 161 GD GD A1272 1555 1555 3.25 LINK OD1 ASN A 224 GD GD A1272 1555 1555 2.33 LINK O VAL A 226 GD GD A1272 1555 1555 2.33 LINK O TRP A 228 GD GD A1272 1555 1555 2.32 LINK GD GD A1272 O HOH A2269 1555 1555 2.36 CISPEP 1 ASN A 104 TRP A 105 0 -0.21 CISPEP 2 ASP A 160 ASP A 161 0 4.65 SITE 1 AC1 5 ASP A 161 ASN A 224 VAL A 226 TRP A 228 SITE 2 AC1 5 HOH A2269 SITE 1 AC2 4 TYR A 102 CYS A 107 GLY A 109 GLY A 111 SITE 1 AC3 5 PRO A 86 PHE A 94 PRO A 95 HOH A2134 SITE 2 AC3 5 HOH A2145 CRYST1 46.300 61.760 106.080 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021598 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016192 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009427 0.00000