HEADER HYDROLASE 16-FEB-12 4AJF TITLE IDENTIFICATION AND STRUCTURAL CHARACTERIZATION OF PDE10 FRAGMENT TITLE 2 INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP AND CAMP-INHIBITED CGMP 3', 5'-CYCLIC COMPND 3 PHOSPHODIESTERASE 10A; COMPND 4 CHAIN: A, D; COMPND 5 FRAGMENT: CATALYTIC DOMAIN, RESIDUES 439-764; COMPND 6 SYNONYM: PDE10, PHOSPHODIESTERASE 10A; COMPND 7 EC: 3.1.4.17, 3.1.4.35; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.JOHANSSON,J.S.ALBERT,L.SPADOLA,T.AKERUD,E.BACK,P.HILLERTZ, AUTHOR 2 R.HORSEFELD,C.SCOTT,N.SPEAR,G.TIAN,A.TIGERSTROM,D.AHARONY, AUTHOR 3 S.GESCHWINDNER REVDAT 2 04-APR-18 4AJF 1 REMARK REVDAT 1 06-MAR-13 4AJF 0 JRNL AUTH P.JOHANSSON,J.S.ALBERT,L.SPADOLA,T.AKERUD,E.BACK,P.HILLERTZ, JRNL AUTH 2 R.HORSEFELD,C.SCOTT,N.SPEAR,G.TIAN,A.TIGERSTROM,D.AHARONY, JRNL AUTH 3 S.GESCHWINDNER JRNL TITL IDENTIFICATION AND STRUCTURAL CHARACTERIZATION OF PDE10 JRNL TITL 2 FRAGMENT INHIBITORS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.9.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 50627 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2563 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.95 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3548 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.5535 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3351 REMARK 3 BIN R VALUE (WORKING SET) : 0.5538 REMARK 3 BIN FREE R VALUE : 0.5491 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.55 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 197 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5278 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 369 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.11 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -11.82080 REMARK 3 B22 (A**2) : 8.02080 REMARK 3 B33 (A**2) : 3.80010 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.389 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5423 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7345 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1889 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 141 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 773 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5423 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 703 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6741 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.68 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.65 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 RESIDUE TYPES WITHOUT CCP4 ATOM TYPE IN LIBRARY=ZN MG F03. REMARK 3 NUMBER OF ATOMS WITH PROPER CCP4 ATOM TYPE=5647. NUMBER WITH REMARK 3 APPROX DEFAULT CCP4 ATOM TYPE=15. NUMBER TREATED BY BAD NON- REMARK 3 BONDED CONTACTS=4. REMARK 4 REMARK 4 4AJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1290051316. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN A200 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50691 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 29.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 1.38000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13-18% PEG3350, 4-10 MM TCEP, 100 MM REMARK 280 HEPES PH 7.5 AND 200 MM MGCL2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.68550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.29800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.89900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.29800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.68550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.89900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -112.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR D 771 REMARK 465 ALA D 772 REMARK 465 THR D 773 REMARK 465 TRP D 774 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 760 CA CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 524 -53.49 -123.59 REMARK 500 ASN A 544 26.49 -140.54 REMARK 500 ASP A 579 63.29 34.43 REMARK 500 VAL A 733 -68.67 -122.56 REMARK 500 ASN D 518 15.62 -68.11 REMARK 500 TYR D 524 -56.22 -125.10 REMARK 500 GLN D 576 63.17 -103.20 REMARK 500 LYS D 577 -56.33 -162.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2134 DISTANCE = 6.63 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1775 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 564 OD2 REMARK 620 2 HOH A2062 O 99.2 REMARK 620 3 HIS A 529 NE2 85.7 87.4 REMARK 620 4 ASP A 674 OD1 172.3 86.5 89.5 REMARK 620 5 HOH A2079 O 92.1 74.4 161.2 94.3 REMARK 620 6 HIS A 563 NE2 88.4 172.3 93.6 85.9 105.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1776 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 564 OD1 REMARK 620 2 HOH A2093 O 169.5 REMARK 620 3 HOH A2079 O 94.9 87.7 REMARK 620 4 HOH A2078 O 83.4 86.1 99.1 REMARK 620 5 HOH A2063 O 103.5 86.9 82.3 172.8 REMARK 620 6 HOH A2080 O 91.0 88.6 167.1 92.9 85.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D1771 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 674 OD1 REMARK 620 2 HOH D2049 O 92.9 REMARK 620 3 HIS D 563 NE2 85.2 178.1 REMARK 620 4 HIS D 529 NE2 91.6 86.4 93.2 REMARK 620 5 HOH D2059 O 86.1 84.4 95.9 170.4 REMARK 620 6 ASP D 564 OD2 176.4 85.6 96.2 85.0 97.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D1772 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 564 OD1 REMARK 620 2 HOH D2048 O 97.9 REMARK 620 3 HOH D2059 O 87.4 85.7 REMARK 620 4 HOH D2060 O 94.9 79.0 164.7 REMARK 620 5 HOH D2074 O 173.0 89.0 92.1 87.4 REMARK 620 6 HOH D2058 O 77.1 174.6 96.1 99.2 96.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1775 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1776 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F03 A 1777 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 1771 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 1772 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LRB RELATED DB: PDB REMARK 900 CATALYTIC DOMAIN OF HUMAN PHOSPHODIESTERASE 10A REMARK 900 RELATED ID: 2WEY RELATED DB: PDB REMARK 900 HUMAN PDE-PAPAVERINE COMPLEX OBTAINED BY LIGAND SOAKING OF CROSS- REMARK 900 LINKED PROTEIN CRYSTALS REMARK 900 RELATED ID: 2Y0J RELATED DB: PDB REMARK 900 TRIAZOLOQUINAZOLINES AS A NOVEL CLASS OF PHOSPHODIESTERASE 10A REMARK 900 (PDE10A) INHIBITORS, PART 2, LEAD-OPTIMISATION. REMARK 900 RELATED ID: 4AEL RELATED DB: PDB REMARK 900 PDE10A IN COMPLEX WITH THE INHIBITOR AZ5 REMARK 900 RELATED ID: 4AJD RELATED DB: PDB REMARK 900 IDENTIFICATION AND STRUCTURAL CHARACTERIZATION OF PDE10 FRAGMENT REMARK 900 INHIBITORS REMARK 900 RELATED ID: 4AJG RELATED DB: PDB REMARK 900 IDENTIFICATION AND STRUCTURAL CHARACTERIZATION OF PDE10 FRAGMENT REMARK 900 INHIBITORS REMARK 900 RELATED ID: 4AJM RELATED DB: PDB REMARK 900 DEVELOPMENT OF A PLATE-BASED OPTICAL BIOSENSOR METHODOLOGY TO REMARK 900 IDENTIFY PDE10 FRAGMENT INHIBITORS DBREF 4AJF A 449 774 UNP Q9Y233 PDE10_HUMAN 439 764 DBREF 4AJF D 449 774 UNP Q9Y233 PDE10_HUMAN 439 764 SEQADV 4AJF ASN A 447 UNP Q9Y233 EXPRESSION TAG SEQADV 4AJF ALA A 448 UNP Q9Y233 EXPRESSION TAG SEQADV 4AJF ASN D 447 UNP Q9Y233 EXPRESSION TAG SEQADV 4AJF ALA D 448 UNP Q9Y233 EXPRESSION TAG SEQRES 1 A 328 ASN ALA SER ILE CYS THR SER GLU GLU TRP GLN GLY LEU SEQRES 2 A 328 MET GLN PHE THR LEU PRO VAL ARG LEU CYS LYS GLU ILE SEQRES 3 A 328 GLU LEU PHE HIS PHE ASP ILE GLY PRO PHE GLU ASN MET SEQRES 4 A 328 TRP PRO GLY ILE PHE VAL TYR MET VAL HIS ARG SER CYS SEQRES 5 A 328 GLY THR SER CYS PHE GLU LEU GLU LYS LEU CYS ARG PHE SEQRES 6 A 328 ILE MET SER VAL LYS LYS ASN TYR ARG ARG VAL PRO TYR SEQRES 7 A 328 HIS ASN TRP LYS HIS ALA VAL THR VAL ALA HIS CYS MET SEQRES 8 A 328 TYR ALA ILE LEU GLN ASN ASN HIS THR LEU PHE THR ASP SEQRES 9 A 328 LEU GLU ARG LYS GLY LEU LEU ILE ALA CYS LEU CYS HIS SEQRES 10 A 328 ASP LEU ASP HIS ARG GLY PHE SER ASN SER TYR LEU GLN SEQRES 11 A 328 LYS PHE ASP HIS PRO LEU ALA ALA LEU TYR SER THR SER SEQRES 12 A 328 THR MET GLU GLN HIS HIS PHE SER GLN THR VAL SER ILE SEQRES 13 A 328 LEU GLN LEU GLU GLY HIS ASN ILE PHE SER THR LEU SER SEQRES 14 A 328 SER SER GLU TYR GLU GLN VAL LEU GLU ILE ILE ARG LYS SEQRES 15 A 328 ALA ILE ILE ALA THR ASP LEU ALA LEU TYR PHE GLY ASN SEQRES 16 A 328 ARG LYS GLN LEU GLU GLU MET TYR GLN THR GLY SER LEU SEQRES 17 A 328 ASN LEU ASN ASN GLN SER HIS ARG ASP ARG VAL ILE GLY SEQRES 18 A 328 LEU MET MET THR ALA CYS ASP LEU CYS SER VAL THR LYS SEQRES 19 A 328 LEU TRP PRO VAL THR LYS LEU THR ALA ASN ASP ILE TYR SEQRES 20 A 328 ALA GLU PHE TRP ALA GLU GLY ASP GLU MET LYS LYS LEU SEQRES 21 A 328 GLY ILE GLN PRO ILE PRO MET MET ASP ARG ASP LYS LYS SEQRES 22 A 328 ASP GLU VAL PRO GLN GLY GLN LEU GLY PHE TYR ASN ALA SEQRES 23 A 328 VAL ALA ILE PRO CYS TYR THR THR LEU THR GLN ILE LEU SEQRES 24 A 328 PRO PRO THR GLU PRO LEU LEU LYS ALA CYS ARG ASP ASN SEQRES 25 A 328 LEU SER GLN TRP GLU LYS VAL ILE ARG GLY GLU GLU THR SEQRES 26 A 328 ALA THR TRP SEQRES 1 D 328 ASN ALA SER ILE CYS THR SER GLU GLU TRP GLN GLY LEU SEQRES 2 D 328 MET GLN PHE THR LEU PRO VAL ARG LEU CYS LYS GLU ILE SEQRES 3 D 328 GLU LEU PHE HIS PHE ASP ILE GLY PRO PHE GLU ASN MET SEQRES 4 D 328 TRP PRO GLY ILE PHE VAL TYR MET VAL HIS ARG SER CYS SEQRES 5 D 328 GLY THR SER CYS PHE GLU LEU GLU LYS LEU CYS ARG PHE SEQRES 6 D 328 ILE MET SER VAL LYS LYS ASN TYR ARG ARG VAL PRO TYR SEQRES 7 D 328 HIS ASN TRP LYS HIS ALA VAL THR VAL ALA HIS CYS MET SEQRES 8 D 328 TYR ALA ILE LEU GLN ASN ASN HIS THR LEU PHE THR ASP SEQRES 9 D 328 LEU GLU ARG LYS GLY LEU LEU ILE ALA CYS LEU CYS HIS SEQRES 10 D 328 ASP LEU ASP HIS ARG GLY PHE SER ASN SER TYR LEU GLN SEQRES 11 D 328 LYS PHE ASP HIS PRO LEU ALA ALA LEU TYR SER THR SER SEQRES 12 D 328 THR MET GLU GLN HIS HIS PHE SER GLN THR VAL SER ILE SEQRES 13 D 328 LEU GLN LEU GLU GLY HIS ASN ILE PHE SER THR LEU SER SEQRES 14 D 328 SER SER GLU TYR GLU GLN VAL LEU GLU ILE ILE ARG LYS SEQRES 15 D 328 ALA ILE ILE ALA THR ASP LEU ALA LEU TYR PHE GLY ASN SEQRES 16 D 328 ARG LYS GLN LEU GLU GLU MET TYR GLN THR GLY SER LEU SEQRES 17 D 328 ASN LEU ASN ASN GLN SER HIS ARG ASP ARG VAL ILE GLY SEQRES 18 D 328 LEU MET MET THR ALA CYS ASP LEU CYS SER VAL THR LYS SEQRES 19 D 328 LEU TRP PRO VAL THR LYS LEU THR ALA ASN ASP ILE TYR SEQRES 20 D 328 ALA GLU PHE TRP ALA GLU GLY ASP GLU MET LYS LYS LEU SEQRES 21 D 328 GLY ILE GLN PRO ILE PRO MET MET ASP ARG ASP LYS LYS SEQRES 22 D 328 ASP GLU VAL PRO GLN GLY GLN LEU GLY PHE TYR ASN ALA SEQRES 23 D 328 VAL ALA ILE PRO CYS TYR THR THR LEU THR GLN ILE LEU SEQRES 24 D 328 PRO PRO THR GLU PRO LEU LEU LYS ALA CYS ARG ASP ASN SEQRES 25 D 328 LEU SER GLN TRP GLU LYS VAL ILE ARG GLY GLU GLU THR SEQRES 26 D 328 ALA THR TRP HET ZN A1775 1 HET MG A1776 1 HET F03 A1777 15 HET ZN D1771 1 HET MG D1772 1 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM F03 N-(4-OXO-3H-QUINAZOLIN-2-YL)ACETAMIDE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 MG 2(MG 2+) FORMUL 5 F03 C10 H9 N3 O2 FORMUL 8 HOH *369(H2 O) HELIX 1 1 THR A 452 PHE A 462 1 11 HELIX 2 2 PRO A 465 ILE A 472 1 8 HELIX 3 3 ILE A 479 ASN A 484 5 6 HELIX 4 4 MET A 485 GLY A 499 1 15 HELIX 5 5 GLU A 504 ASN A 518 1 15 HELIX 6 6 ASN A 526 ASN A 544 1 19 HELIX 7 7 HIS A 545 PHE A 548 5 4 HELIX 8 8 THR A 549 HIS A 563 1 15 HELIX 9 9 SER A 571 PHE A 578 1 8 HELIX 10 10 HIS A 580 TYR A 586 1 7 HELIX 11 11 SER A 589 GLN A 604 1 16 HELIX 12 12 SER A 615 THR A 633 1 19 HELIX 13 13 ASP A 634 THR A 651 1 18 HELIX 14 14 ASN A 658 LEU A 675 1 18 HELIX 15 15 CYS A 676 LYS A 680 5 5 HELIX 16 16 LEU A 681 LEU A 706 1 26 HELIX 17 17 ILE A 711 ASP A 715 5 5 HELIX 18 18 ASP A 715 ASP A 720 5 6 HELIX 19 19 GLU A 721 VAL A 733 1 13 HELIX 20 20 VAL A 733 LEU A 745 1 13 HELIX 21 21 THR A 748 LEU A 759 1 12 HELIX 22 22 GLN A 761 ARG A 767 1 7 HELIX 23 23 THR D 452 GLN D 461 1 10 HELIX 24 24 PRO D 465 CYS D 469 5 5 HELIX 25 25 LYS D 470 LEU D 474 5 5 HELIX 26 26 ILE D 479 ASN D 484 5 6 HELIX 27 27 MET D 485 GLY D 499 1 15 HELIX 28 28 GLU D 504 ASN D 518 1 15 HELIX 29 29 ASN D 526 ASN D 544 1 19 HELIX 30 30 THR D 549 HIS D 563 1 15 HELIX 31 31 SER D 571 GLN D 576 1 6 HELIX 32 32 HIS D 580 TYR D 586 1 7 HELIX 33 33 SER D 589 GLN D 604 1 16 HELIX 34 34 SER D 615 ALA D 632 1 18 HELIX 35 35 ASP D 634 THR D 651 1 18 HELIX 36 36 ASN D 658 LEU D 675 1 18 HELIX 37 37 CYS D 676 LYS D 680 5 5 HELIX 38 38 LEU D 681 LEU D 687 1 7 HELIX 39 39 ASN D 690 ILE D 692 5 3 HELIX 40 40 TYR D 693 LYS D 705 1 13 HELIX 41 41 ILE D 711 ASP D 715 5 5 HELIX 42 42 GLU D 721 VAL D 733 1 13 HELIX 43 43 VAL D 733 LEU D 745 1 13 HELIX 44 44 THR D 748 ARG D 767 1 20 LINK ZN ZN A1775 OD2 ASP A 564 1555 1555 2.18 LINK ZN ZN A1775 O HOH A2062 1555 1555 2.59 LINK ZN ZN A1775 NE2 HIS A 529 1555 1555 2.18 LINK ZN ZN A1775 OD1 ASP A 674 1555 1555 2.14 LINK ZN ZN A1775 O HOH A2079 1555 1555 2.17 LINK ZN ZN A1775 NE2 HIS A 563 1555 1555 2.18 LINK MG MG A1776 OD1 ASP A 564 1555 1555 2.11 LINK MG MG A1776 O HOH A2093 1555 1555 2.18 LINK MG MG A1776 O HOH A2079 1555 1555 2.01 LINK MG MG A1776 O HOH A2078 1555 1555 1.97 LINK MG MG A1776 O HOH A2063 1555 1555 2.09 LINK MG MG A1776 O HOH A2080 1555 1555 2.06 LINK ZN ZN D1771 OD1 ASP D 674 1555 1555 2.21 LINK ZN ZN D1771 O HOH D2049 1555 1555 2.20 LINK ZN ZN D1771 NE2 HIS D 563 1555 1555 1.98 LINK ZN ZN D1771 NE2 HIS D 529 1555 1555 2.14 LINK ZN ZN D1771 O HOH D2059 1555 1555 2.13 LINK ZN ZN D1771 OD2 ASP D 564 1555 1555 2.25 LINK MG MG D1772 OD1 ASP D 564 1555 1555 2.08 LINK MG MG D1772 O HOH D2048 1555 1555 2.04 LINK MG MG D1772 O HOH D2059 1555 1555 2.07 LINK MG MG D1772 O HOH D2060 1555 1555 2.38 LINK MG MG D1772 O HOH D2074 1555 1555 2.05 LINK MG MG D1772 O HOH D2058 1555 1555 2.07 SITE 1 AC1 6 HIS A 529 HIS A 563 ASP A 564 ASP A 674 SITE 2 AC1 6 HOH A2062 HOH A2079 SITE 1 AC2 6 ASP A 564 HOH A2063 HOH A2078 HOH A2079 SITE 2 AC2 6 HOH A2080 HOH A2093 SITE 1 AC3 9 VAL A 678 ILE A 692 TYR A 693 MET A 713 SITE 2 AC3 9 GLY A 725 GLN A 726 PHE A 729 HOH A2217 SITE 3 AC3 9 LEU D 706 SITE 1 AC4 6 HIS D 529 HIS D 563 ASP D 564 ASP D 674 SITE 2 AC4 6 HOH D2049 HOH D2059 SITE 1 AC5 6 ASP D 564 HOH D2048 HOH D2058 HOH D2059 SITE 2 AC5 6 HOH D2060 HOH D2074 CRYST1 49.371 81.798 156.596 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020255 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012225 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006386 0.00000 MTRIX1 1 -0.174000 -0.943000 -0.284000 -0.04220 1 MTRIX2 1 0.981000 -0.140000 -0.135000 -0.77611 1 MTRIX3 1 0.088000 -0.302000 0.949000 0.05220 1