data_4AYA # _entry.id 4AYA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4AYA PDBE EBI-47470 WWPDB D_1290047470 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4AYA _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-06-19 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wong, M.V.' 1 'Jiang, S.' 2 'Palasingam, P.' 3 'Kolatkar, P.R.' 4 # _citation.id primary _citation.title ;A Divalent Ion is Crucial in the Structure and Dominant-Negative Function of Id Proteins, a Class of Helix-Loop-Helix Transcription Regulators. ; _citation.journal_abbrev 'Plos One' _citation.journal_volume 7 _citation.page_first 48591 _citation.page_last ? _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23119064 _citation.pdbx_database_id_DOI 10.1371/JOURNAL.PONE.0048591 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wong, M.V.' 1 primary 'Jiang, S.' 2 primary 'Palasingam, P.' 3 primary 'Kolatkar, P.R.' 4 # _cell.entry_id 4AYA _cell.length_a 51.622 _cell.length_b 51.622 _cell.length_c 111.474 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4AYA _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA-BINDING PROTEIN INHIBITOR ID-2' 10844.563 2 ? ? 'HELIX-LOOP-HELIX DOMAIN, RESIDUES 1-82' ? 2 non-polymer syn 'POTASSIUM ION' 39.098 2 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 4 water nat water 18.015 24 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CLASS D BASIC HELIX-LOOP-HELIX PROTEIN 26, CLASS B BASIC HELIX-LOOP-HELIX PROTEIN 26, BHLHB26, INHIBITOR OF DNA BINDING 2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GMKAFSPVRSVRKNSLSDHSLGISRSKTPVDDPMSLLYNMNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIAL DSHLKPSFLVQSGDIAS ; _entity_poly.pdbx_seq_one_letter_code_can ;GMKAFSPVRSVRKNSLSDHSLGISRSKTPVDDPMSLLYNMNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIAL DSHLKPSFLVQSGDIAS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MET n 1 3 LYS n 1 4 ALA n 1 5 PHE n 1 6 SER n 1 7 PRO n 1 8 VAL n 1 9 ARG n 1 10 SER n 1 11 VAL n 1 12 ARG n 1 13 LYS n 1 14 ASN n 1 15 SER n 1 16 LEU n 1 17 SER n 1 18 ASP n 1 19 HIS n 1 20 SER n 1 21 LEU n 1 22 GLY n 1 23 ILE n 1 24 SER n 1 25 ARG n 1 26 SER n 1 27 LYS n 1 28 THR n 1 29 PRO n 1 30 VAL n 1 31 ASP n 1 32 ASP n 1 33 PRO n 1 34 MET n 1 35 SER n 1 36 LEU n 1 37 LEU n 1 38 TYR n 1 39 ASN n 1 40 MET n 1 41 ASN n 1 42 ASP n 1 43 CYS n 1 44 TYR n 1 45 SER n 1 46 LYS n 1 47 LEU n 1 48 LYS n 1 49 GLU n 1 50 LEU n 1 51 VAL n 1 52 PRO n 1 53 SER n 1 54 ILE n 1 55 PRO n 1 56 GLN n 1 57 ASN n 1 58 LYS n 1 59 LYS n 1 60 VAL n 1 61 SER n 1 62 LYS n 1 63 MET n 1 64 GLU n 1 65 ILE n 1 66 LEU n 1 67 GLN n 1 68 HIS n 1 69 VAL n 1 70 ILE n 1 71 ASP n 1 72 TYR n 1 73 ILE n 1 74 LEU n 1 75 ASP n 1 76 LEU n 1 77 GLN n 1 78 ILE n 1 79 ALA n 1 80 LEU n 1 81 ASP n 1 82 SER n 1 83 HIS n 1 84 LEU n 1 85 LYS n 1 86 PRO n 1 87 SER n 1 88 PHE n 1 89 LEU n 1 90 VAL n 1 91 GLN n 1 92 SER n 1 93 GLY n 1 94 ASP n 1 95 ILE n 1 96 ALA n 1 97 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PDEST-565 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ID2_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q02363 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4AYA A 2 ? 83 ? Q02363 1 ? 82 ? 1 82 2 1 4AYA B 2 ? 83 ? Q02363 1 ? 82 ? 1 82 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4AYA GLY A 1 ? UNP Q02363 ? ? 'cloning artifact' 0 1 1 4AYA LEU A 84 ? UNP Q02363 ? ? 'SEE REMARK 999' 83 2 1 4AYA LYS A 85 ? UNP Q02363 ? ? 'SEE REMARK 999' 84 3 1 4AYA PRO A 86 ? UNP Q02363 ? ? 'SEE REMARK 999' 85 4 1 4AYA SER A 87 ? UNP Q02363 ? ? 'SEE REMARK 999' 86 5 1 4AYA PHE A 88 ? UNP Q02363 ? ? 'SEE REMARK 999' 87 6 1 4AYA LEU A 89 ? UNP Q02363 ? ? 'SEE REMARK 999' 88 7 1 4AYA VAL A 90 ? UNP Q02363 ? ? 'SEE REMARK 999' 89 8 1 4AYA GLN A 91 ? UNP Q02363 ? ? 'SEE REMARK 999' 90 9 1 4AYA SER A 92 ? UNP Q02363 ? ? 'SEE REMARK 999' 91 10 1 4AYA GLY A 93 ? UNP Q02363 ? ? 'SEE REMARK 999' 92 11 1 4AYA ASP A 94 ? UNP Q02363 ? ? 'SEE REMARK 999' 93 12 1 4AYA ILE A 95 ? UNP Q02363 ? ? 'SEE REMARK 999' 94 13 1 4AYA ALA A 96 ? UNP Q02363 ? ? 'SEE REMARK 999' 95 14 1 4AYA SER A 97 ? UNP Q02363 ? ? 'SEE REMARK 999' 96 15 2 4AYA GLY B 1 ? UNP Q02363 ? ? 'cloning artifact' 0 16 2 4AYA LEU B 84 ? UNP Q02363 ? ? 'SEE REMARK 999' 83 17 2 4AYA LYS B 85 ? UNP Q02363 ? ? 'SEE REMARK 999' 84 18 2 4AYA PRO B 86 ? UNP Q02363 ? ? 'SEE REMARK 999' 85 19 2 4AYA SER B 87 ? UNP Q02363 ? ? 'SEE REMARK 999' 86 20 2 4AYA PHE B 88 ? UNP Q02363 ? ? 'SEE REMARK 999' 87 21 2 4AYA LEU B 89 ? UNP Q02363 ? ? 'SEE REMARK 999' 88 22 2 4AYA VAL B 90 ? UNP Q02363 ? ? 'SEE REMARK 999' 89 23 2 4AYA GLN B 91 ? UNP Q02363 ? ? 'SEE REMARK 999' 90 24 2 4AYA SER B 92 ? UNP Q02363 ? ? 'SEE REMARK 999' 91 25 2 4AYA GLY B 93 ? UNP Q02363 ? ? 'SEE REMARK 999' 92 26 2 4AYA ASP B 94 ? UNP Q02363 ? ? 'SEE REMARK 999' 93 27 2 4AYA ILE B 95 ? UNP Q02363 ? ? 'SEE REMARK 999' 94 28 2 4AYA ALA B 96 ? UNP Q02363 ? ? 'SEE REMARK 999' 95 29 2 4AYA SER B 97 ? UNP Q02363 ? ? 'SEE REMARK 999' 96 30 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4AYA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.98 _exptl_crystal.density_percent_sol 37.8 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PROTEIN WAS CRYSTALLIZED FROM 0.1 M MES PH6.5, 2.0 M POTASSIUM ACETATE' # _diffrn.id 1 _diffrn.ambient_temp 103 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2009-06-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.080900 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength 1.080900 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4AYA _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.10 _reflns.number_obs 10569 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 40.60 _reflns.B_iso_Wilson_estimate 41.98 _reflns.pdbx_redundancy 11.9 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.42 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.20 _reflns_shell.pdbx_redundancy 10.2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4AYA _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 10026 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.65 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.706 _refine.ls_d_res_high 2.103 _refine.ls_percent_reflns_obs 95.20 _refine.ls_R_factor_obs 0.2271 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2246 _refine.ls_R_factor_R_free 0.2497 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.8 _refine.ls_number_reflns_R_free 987 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 54.4 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0 _refine.solvent_model_param_bsol 0 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details 'RESIDUES 1-29 ARE MISSING IN CHAIN A. RESIDUES 1-34 ARE MISSING IN CHAIN B.' _refine.pdbx_starting_model 'INTERNAL SELENOMETHIONINE-SUBSTITUTED ID2 STRUCTURE AT 3.0A' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.23 _refine.pdbx_overall_phase_error 27.31 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 870 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 24 _refine_hist.number_atoms_total 900 _refine_hist.d_res_high 2.103 _refine_hist.d_res_low 44.706 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 888 'X-RAY DIFFRACTION' ? f_angle_d 1.071 ? ? 1198 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.029 ? ? 346 'X-RAY DIFFRACTION' ? f_chiral_restr 0.059 ? ? 141 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 149 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.1031 2.2139 1147 0.2513 88.00 0.3049 . . 129 . . 'X-RAY DIFFRACTION' . 2.2139 2.3526 1228 0.2351 91.00 0.3124 . . 136 . . 'X-RAY DIFFRACTION' . 2.3526 2.5343 1229 0.2357 94.00 0.3081 . . 133 . . 'X-RAY DIFFRACTION' . 2.5343 2.7893 1300 0.2585 97.00 0.2775 . . 140 . . 'X-RAY DIFFRACTION' . 2.7893 3.1928 1335 0.2613 98.00 0.3268 . . 148 . . 'X-RAY DIFFRACTION' . 3.1928 4.0222 1356 0.2096 100.00 0.2479 . . 148 . . 'X-RAY DIFFRACTION' . 4.0222 44.7160 1444 0.2091 99.00 0.1968 . . 153 . . # _struct.entry_id 4AYA _struct.title 'Crystal structure of ID2 HLH homodimer at 2.1A resolution' _struct.pdbx_descriptor 'DNA-BINDING PROTEIN INHIBITOR ID-2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4AYA _struct_keywords.pdbx_keywords 'CELL CYCLE' _struct_keywords.text 'CELL CYCLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 32 ? VAL A 51 ? ASP A 31 VAL A 50 1 ? 20 HELX_P HELX_P2 2 SER A 61 ? SER A 82 ? SER A 60 SER A 81 1 ? 22 HELX_P HELX_P3 3 ASN B 39 ? VAL B 51 ? ASN B 38 VAL B 50 1 ? 13 HELX_P HELX_P4 4 SER B 61 ? SER B 82 ? SER B 60 SER B 81 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? C K . K ? ? ? 1_555 A LYS 48 O ? ? A K 1089 A LYS 47 1_555 ? ? ? ? ? ? ? 2.703 ? metalc2 metalc ? ? C K . K ? ? ? 1_555 A VAL 51 O ? ? A K 1089 A VAL 50 1_555 ? ? ? ? ? ? ? 2.680 ? metalc3 metalc ? ? C K . K ? ? ? 1_555 F HOH . O ? ? A K 1089 A HOH 2001 1_555 ? ? ? ? ? ? ? 3.060 ? metalc4 metalc ? ? C K . K ? ? ? 1_555 A ILE 54 O ? ? A K 1089 A ILE 53 1_555 ? ? ? ? ? ? ? 2.631 ? metalc5 metalc ? ? C K . K ? ? ? 1_555 A GLN 56 OE1 ? ? A K 1089 A GLN 55 1_555 ? ? ? ? ? ? ? 3.029 ? metalc6 metalc ? ? E K . K ? ? ? 1_555 B ILE 54 O ? ? B K 1083 B ILE 53 1_555 ? ? ? ? ? ? ? 2.703 ? metalc7 metalc ? ? E K . K ? ? ? 1_555 G HOH . O ? ? B K 1083 B HOH 2007 1_555 ? ? ? ? ? ? ? 2.837 ? metalc8 metalc ? ? E K . K ? ? ? 1_555 B LYS 48 O ? ? B K 1083 B LYS 47 1_555 ? ? ? ? ? ? ? 2.602 ? metalc9 metalc ? ? E K . K ? ? ? 1_555 B VAL 51 O ? ? B K 1083 B VAL 50 1_555 ? ? ? ? ? ? ? 2.604 ? metalc10 metalc ? ? E K . K ? ? ? 1_555 B GLN 56 OE1 ? ? B K 1083 B GLN 55 1_555 ? ? ? ? ? ? ? 2.884 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE K A 1089' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ACT A 1090' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE K B 1083' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 LYS A 48 ? LYS A 47 . ? 1_555 ? 2 AC1 6 VAL A 51 ? VAL A 50 . ? 1_555 ? 3 AC1 6 PRO A 52 ? PRO A 51 . ? 1_555 ? 4 AC1 6 ILE A 54 ? ILE A 53 . ? 1_555 ? 5 AC1 6 GLN A 56 ? GLN A 55 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH A 2001 . ? 1_555 ? 7 AC2 4 MET A 40 ? MET A 39 . ? 1_555 ? 8 AC2 4 LYS A 62 ? LYS A 61 . ? 1_555 ? 9 AC2 4 TYR B 44 ? TYR B 43 . ? 1_555 ? 10 AC2 4 LYS B 62 ? LYS B 61 . ? 1_555 ? 11 AC3 6 LYS B 48 ? LYS B 47 . ? 1_555 ? 12 AC3 6 VAL B 51 ? VAL B 50 . ? 1_555 ? 13 AC3 6 PRO B 52 ? PRO B 51 . ? 1_555 ? 14 AC3 6 ILE B 54 ? ILE B 53 . ? 1_555 ? 15 AC3 6 GLN B 56 ? GLN B 55 . ? 1_555 ? 16 AC3 6 HOH G . ? HOH B 2007 . ? 1_555 ? # _database_PDB_matrix.entry_id 4AYA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4AYA _atom_sites.fract_transf_matrix[1][1] 0.019372 _atom_sites.fract_transf_matrix[1][2] 0.011184 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022368 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008971 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MET 2 1 ? ? ? A . n A 1 3 LYS 3 2 ? ? ? A . n A 1 4 ALA 4 3 ? ? ? A . n A 1 5 PHE 5 4 ? ? ? A . n A 1 6 SER 6 5 ? ? ? A . n A 1 7 PRO 7 6 ? ? ? A . n A 1 8 VAL 8 7 ? ? ? A . n A 1 9 ARG 9 8 ? ? ? A . n A 1 10 SER 10 9 ? ? ? A . n A 1 11 VAL 11 10 ? ? ? A . n A 1 12 ARG 12 11 ? ? ? A . n A 1 13 LYS 13 12 ? ? ? A . n A 1 14 ASN 14 13 ? ? ? A . n A 1 15 SER 15 14 ? ? ? A . n A 1 16 LEU 16 15 ? ? ? A . n A 1 17 SER 17 16 ? ? ? A . n A 1 18 ASP 18 17 ? ? ? A . n A 1 19 HIS 19 18 ? ? ? A . n A 1 20 SER 20 19 ? ? ? A . n A 1 21 LEU 21 20 ? ? ? A . n A 1 22 GLY 22 21 ? ? ? A . n A 1 23 ILE 23 22 ? ? ? A . n A 1 24 SER 24 23 ? ? ? A . n A 1 25 ARG 25 24 ? ? ? A . n A 1 26 SER 26 25 ? ? ? A . n A 1 27 LYS 27 26 ? ? ? A . n A 1 28 THR 28 27 ? ? ? A . n A 1 29 PRO 29 28 ? ? ? A . n A 1 30 VAL 30 29 ? ? ? A . n A 1 31 ASP 31 30 30 ASP ASP A . n A 1 32 ASP 32 31 31 ASP ASP A . n A 1 33 PRO 33 32 32 PRO PRO A . n A 1 34 MET 34 33 33 MET MET A . n A 1 35 SER 35 34 34 SER SER A . n A 1 36 LEU 36 35 35 LEU LEU A . n A 1 37 LEU 37 36 36 LEU LEU A . n A 1 38 TYR 38 37 37 TYR TYR A . n A 1 39 ASN 39 38 38 ASN ASN A . n A 1 40 MET 40 39 39 MET MET A . n A 1 41 ASN 41 40 40 ASN ASN A . n A 1 42 ASP 42 41 41 ASP ASP A . n A 1 43 CYS 43 42 42 CYS CYS A . n A 1 44 TYR 44 43 43 TYR TYR A . n A 1 45 SER 45 44 44 SER SER A . n A 1 46 LYS 46 45 45 LYS LYS A . n A 1 47 LEU 47 46 46 LEU LEU A . n A 1 48 LYS 48 47 47 LYS LYS A . n A 1 49 GLU 49 48 48 GLU GLU A . n A 1 50 LEU 50 49 49 LEU LEU A . n A 1 51 VAL 51 50 50 VAL VAL A . n A 1 52 PRO 52 51 51 PRO PRO A . n A 1 53 SER 53 52 52 SER SER A . n A 1 54 ILE 54 53 53 ILE ILE A . n A 1 55 PRO 55 54 54 PRO PRO A . n A 1 56 GLN 56 55 55 GLN GLN A . n A 1 57 ASN 57 56 56 ASN ASN A . n A 1 58 LYS 58 57 57 LYS LYS A . n A 1 59 LYS 59 58 58 LYS LYS A . n A 1 60 VAL 60 59 59 VAL VAL A . n A 1 61 SER 61 60 60 SER SER A . n A 1 62 LYS 62 61 61 LYS LYS A . n A 1 63 MET 63 62 62 MET MET A . n A 1 64 GLU 64 63 63 GLU GLU A . n A 1 65 ILE 65 64 64 ILE ILE A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 GLN 67 66 66 GLN GLN A . n A 1 68 HIS 68 67 67 HIS HIS A . n A 1 69 VAL 69 68 68 VAL VAL A . n A 1 70 ILE 70 69 69 ILE ILE A . n A 1 71 ASP 71 70 70 ASP ASP A . n A 1 72 TYR 72 71 71 TYR TYR A . n A 1 73 ILE 73 72 72 ILE ILE A . n A 1 74 LEU 74 73 73 LEU LEU A . n A 1 75 ASP 75 74 74 ASP ASP A . n A 1 76 LEU 76 75 75 LEU LEU A . n A 1 77 GLN 77 76 76 GLN GLN A . n A 1 78 ILE 78 77 77 ILE ILE A . n A 1 79 ALA 79 78 78 ALA ALA A . n A 1 80 LEU 80 79 79 LEU LEU A . n A 1 81 ASP 81 80 80 ASP ASP A . n A 1 82 SER 82 81 81 SER SER A . n A 1 83 HIS 83 82 82 HIS HIS A . n A 1 84 LEU 84 83 83 LEU LEU A . n A 1 85 LYS 85 84 84 LYS LYS A . n A 1 86 PRO 86 85 85 PRO PRO A . n A 1 87 SER 87 86 86 SER SER A . n A 1 88 PHE 88 87 87 PHE PHE A . n A 1 89 LEU 89 88 88 LEU LEU A . n A 1 90 VAL 90 89 ? ? ? A . n A 1 91 GLN 91 90 ? ? ? A . n A 1 92 SER 92 91 ? ? ? A . n A 1 93 GLY 93 92 ? ? ? A . n A 1 94 ASP 94 93 ? ? ? A . n A 1 95 ILE 95 94 ? ? ? A . n A 1 96 ALA 96 95 ? ? ? A . n A 1 97 SER 97 96 ? ? ? A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MET 2 1 ? ? ? B . n B 1 3 LYS 3 2 ? ? ? B . n B 1 4 ALA 4 3 ? ? ? B . n B 1 5 PHE 5 4 ? ? ? B . n B 1 6 SER 6 5 ? ? ? B . n B 1 7 PRO 7 6 ? ? ? B . n B 1 8 VAL 8 7 ? ? ? B . n B 1 9 ARG 9 8 ? ? ? B . n B 1 10 SER 10 9 ? ? ? B . n B 1 11 VAL 11 10 ? ? ? B . n B 1 12 ARG 12 11 ? ? ? B . n B 1 13 LYS 13 12 ? ? ? B . n B 1 14 ASN 14 13 ? ? ? B . n B 1 15 SER 15 14 ? ? ? B . n B 1 16 LEU 16 15 ? ? ? B . n B 1 17 SER 17 16 ? ? ? B . n B 1 18 ASP 18 17 ? ? ? B . n B 1 19 HIS 19 18 ? ? ? B . n B 1 20 SER 20 19 ? ? ? B . n B 1 21 LEU 21 20 ? ? ? B . n B 1 22 GLY 22 21 ? ? ? B . n B 1 23 ILE 23 22 ? ? ? B . n B 1 24 SER 24 23 ? ? ? B . n B 1 25 ARG 25 24 ? ? ? B . n B 1 26 SER 26 25 ? ? ? B . n B 1 27 LYS 27 26 ? ? ? B . n B 1 28 THR 28 27 ? ? ? B . n B 1 29 PRO 29 28 ? ? ? B . n B 1 30 VAL 30 29 ? ? ? B . n B 1 31 ASP 31 30 ? ? ? B . n B 1 32 ASP 32 31 ? ? ? B . n B 1 33 PRO 33 32 ? ? ? B . n B 1 34 MET 34 33 ? ? ? B . n B 1 35 SER 35 34 ? ? ? B . n B 1 36 LEU 36 35 35 LEU LEU B . n B 1 37 LEU 37 36 36 LEU LEU B . n B 1 38 TYR 38 37 37 TYR TYR B . n B 1 39 ASN 39 38 38 ASN ASN B . n B 1 40 MET 40 39 39 MET MET B . n B 1 41 ASN 41 40 40 ASN ASN B . n B 1 42 ASP 42 41 41 ASP ASP B . n B 1 43 CYS 43 42 42 CYS CYS B . n B 1 44 TYR 44 43 43 TYR TYR B . n B 1 45 SER 45 44 44 SER SER B . n B 1 46 LYS 46 45 45 LYS LYS B . n B 1 47 LEU 47 46 46 LEU LEU B . n B 1 48 LYS 48 47 47 LYS LYS B . n B 1 49 GLU 49 48 48 GLU GLU B . n B 1 50 LEU 50 49 49 LEU LEU B . n B 1 51 VAL 51 50 50 VAL VAL B . n B 1 52 PRO 52 51 51 PRO PRO B . n B 1 53 SER 53 52 52 SER SER B . n B 1 54 ILE 54 53 53 ILE ILE B . n B 1 55 PRO 55 54 54 PRO PRO B . n B 1 56 GLN 56 55 55 GLN GLN B . n B 1 57 ASN 57 56 56 ASN ASN B . n B 1 58 LYS 58 57 57 LYS LYS B . n B 1 59 LYS 59 58 58 LYS LYS B . n B 1 60 VAL 60 59 59 VAL VAL B . n B 1 61 SER 61 60 60 SER SER B . n B 1 62 LYS 62 61 61 LYS LYS B . n B 1 63 MET 63 62 62 MET MET B . n B 1 64 GLU 64 63 63 GLU GLU B . n B 1 65 ILE 65 64 64 ILE ILE B . n B 1 66 LEU 66 65 65 LEU LEU B . n B 1 67 GLN 67 66 66 GLN GLN B . n B 1 68 HIS 68 67 67 HIS HIS B . n B 1 69 VAL 69 68 68 VAL VAL B . n B 1 70 ILE 70 69 69 ILE ILE B . n B 1 71 ASP 71 70 70 ASP ASP B . n B 1 72 TYR 72 71 71 TYR TYR B . n B 1 73 ILE 73 72 72 ILE ILE B . n B 1 74 LEU 74 73 73 LEU LEU B . n B 1 75 ASP 75 74 74 ASP ASP B . n B 1 76 LEU 76 75 75 LEU LEU B . n B 1 77 GLN 77 76 76 GLN GLN B . n B 1 78 ILE 78 77 77 ILE ILE B . n B 1 79 ALA 79 78 78 ALA ALA B . n B 1 80 LEU 80 79 79 LEU LEU B . n B 1 81 ASP 81 80 80 ASP ASP B . n B 1 82 SER 82 81 81 SER SER B . n B 1 83 HIS 83 82 82 HIS HIS B . n B 1 84 LEU 84 83 ? ? ? B . n B 1 85 LYS 85 84 ? ? ? B . n B 1 86 PRO 86 85 ? ? ? B . n B 1 87 SER 87 86 ? ? ? B . n B 1 88 PHE 88 87 ? ? ? B . n B 1 89 LEU 89 88 ? ? ? B . n B 1 90 VAL 90 89 ? ? ? B . n B 1 91 GLN 91 90 ? ? ? B . n B 1 92 SER 92 91 ? ? ? B . n B 1 93 GLY 93 92 ? ? ? B . n B 1 94 ASP 94 93 ? ? ? B . n B 1 95 ILE 95 94 ? ? ? B . n B 1 96 ALA 96 95 ? ? ? B . n B 1 97 SER 97 96 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 1089 1089 K K A . D 3 ACT 1 1090 1090 ACT ACT A . E 2 K 1 1083 1083 K K B . F 4 HOH 1 2001 2001 HOH HOH A . F 4 HOH 2 2002 2002 HOH HOH A . F 4 HOH 3 2003 2003 HOH HOH A . F 4 HOH 4 2004 2004 HOH HOH A . F 4 HOH 5 2005 2005 HOH HOH A . F 4 HOH 6 2006 2006 HOH HOH A . F 4 HOH 7 2007 2007 HOH HOH A . G 4 HOH 1 2001 2001 HOH HOH B . G 4 HOH 2 2002 2002 HOH HOH B . G 4 HOH 3 2003 2003 HOH HOH B . G 4 HOH 4 2004 2004 HOH HOH B . G 4 HOH 5 2005 2005 HOH HOH B . G 4 HOH 6 2006 2006 HOH HOH B . G 4 HOH 7 2007 2007 HOH HOH B . G 4 HOH 8 2008 2008 HOH HOH B . G 4 HOH 9 2009 2009 HOH HOH B . G 4 HOH 10 2010 2010 HOH HOH B . G 4 HOH 11 2011 2011 HOH HOH B . G 4 HOH 12 2012 2012 HOH HOH B . G 4 HOH 13 2013 2013 HOH HOH B . G 4 HOH 14 2014 2014 HOH HOH B . G 4 HOH 15 2015 2015 HOH HOH B . G 4 HOH 16 2016 2016 HOH HOH B . G 4 HOH 17 2017 2017 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2350 ? 1 MORE -30.1 ? 1 'SSA (A^2)' 7350 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 48 ? A LYS 47 ? 1_555 K ? C K . ? A K 1089 ? 1_555 O ? A VAL 51 ? A VAL 50 ? 1_555 85.1 ? 2 O ? A LYS 48 ? A LYS 47 ? 1_555 K ? C K . ? A K 1089 ? 1_555 O ? F HOH . ? A HOH 2001 ? 1_555 105.7 ? 3 O ? A VAL 51 ? A VAL 50 ? 1_555 K ? C K . ? A K 1089 ? 1_555 O ? F HOH . ? A HOH 2001 ? 1_555 82.4 ? 4 O ? A LYS 48 ? A LYS 47 ? 1_555 K ? C K . ? A K 1089 ? 1_555 O ? A ILE 54 ? A ILE 53 ? 1_555 98.2 ? 5 O ? A VAL 51 ? A VAL 50 ? 1_555 K ? C K . ? A K 1089 ? 1_555 O ? A ILE 54 ? A ILE 53 ? 1_555 88.7 ? 6 O ? F HOH . ? A HOH 2001 ? 1_555 K ? C K . ? A K 1089 ? 1_555 O ? A ILE 54 ? A ILE 53 ? 1_555 153.6 ? 7 O ? A LYS 48 ? A LYS 47 ? 1_555 K ? C K . ? A K 1089 ? 1_555 OE1 ? A GLN 56 ? A GLN 55 ? 1_555 85.7 ? 8 O ? A VAL 51 ? A VAL 50 ? 1_555 K ? C K . ? A K 1089 ? 1_555 OE1 ? A GLN 56 ? A GLN 55 ? 1_555 161.2 ? 9 O ? F HOH . ? A HOH 2001 ? 1_555 K ? C K . ? A K 1089 ? 1_555 OE1 ? A GLN 56 ? A GLN 55 ? 1_555 84.3 ? 10 O ? A ILE 54 ? A ILE 53 ? 1_555 K ? C K . ? A K 1089 ? 1_555 OE1 ? A GLN 56 ? A GLN 55 ? 1_555 108.9 ? 11 O ? B ILE 54 ? B ILE 53 ? 1_555 K ? E K . ? B K 1083 ? 1_555 O ? G HOH . ? B HOH 2007 ? 1_555 61.6 ? 12 O ? B ILE 54 ? B ILE 53 ? 1_555 K ? E K . ? B K 1083 ? 1_555 O ? B LYS 48 ? B LYS 47 ? 1_555 87.6 ? 13 O ? G HOH . ? B HOH 2007 ? 1_555 K ? E K . ? B K 1083 ? 1_555 O ? B LYS 48 ? B LYS 47 ? 1_555 141.4 ? 14 O ? B ILE 54 ? B ILE 53 ? 1_555 K ? E K . ? B K 1083 ? 1_555 O ? B VAL 51 ? B VAL 50 ? 1_555 91.5 ? 15 O ? G HOH . ? B HOH 2007 ? 1_555 K ? E K . ? B K 1083 ? 1_555 O ? B VAL 51 ? B VAL 50 ? 1_555 118.3 ? 16 O ? B LYS 48 ? B LYS 47 ? 1_555 K ? E K . ? B K 1083 ? 1_555 O ? B VAL 51 ? B VAL 50 ? 1_555 82.6 ? 17 O ? B ILE 54 ? B ILE 53 ? 1_555 K ? E K . ? B K 1083 ? 1_555 OE1 ? B GLN 56 ? B GLN 55 ? 1_555 107.9 ? 18 O ? G HOH . ? B HOH 2007 ? 1_555 K ? E K . ? B K 1083 ? 1_555 OE1 ? B GLN 56 ? B GLN 55 ? 1_555 89.0 ? 19 O ? B LYS 48 ? B LYS 47 ? 1_555 K ? E K . ? B K 1083 ? 1_555 OE1 ? B GLN 56 ? B GLN 55 ? 1_555 78.5 ? 20 O ? B VAL 51 ? B VAL 50 ? 1_555 K ? E K . ? B K 1083 ? 1_555 OE1 ? B GLN 56 ? B GLN 55 ? 1_555 152.1 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2012-11-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 PHENIX phasing . ? 4 # _pdbx_entry_details.entry_id 4AYA _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;FIRST RESIDUE IN SEQUENCE AFTER TEV CLEAVAGE IS A GLYCINE. ID2 SEQUENCE NUMBERING STARTS FROM SECOND RESIDUE, METHIONINE. RESIDUE 83 ONWARDS CONTAINS THE C-TERMINAL STABILIZER POLYPEPTIDE. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 56 ? ? -85.06 39.03 2 1 SER A 81 ? ? -116.19 -72.41 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MET 1 ? A MET 2 3 1 Y 1 A LYS 2 ? A LYS 3 4 1 Y 1 A ALA 3 ? A ALA 4 5 1 Y 1 A PHE 4 ? A PHE 5 6 1 Y 1 A SER 5 ? A SER 6 7 1 Y 1 A PRO 6 ? A PRO 7 8 1 Y 1 A VAL 7 ? A VAL 8 9 1 Y 1 A ARG 8 ? A ARG 9 10 1 Y 1 A SER 9 ? A SER 10 11 1 Y 1 A VAL 10 ? A VAL 11 12 1 Y 1 A ARG 11 ? A ARG 12 13 1 Y 1 A LYS 12 ? A LYS 13 14 1 Y 1 A ASN 13 ? A ASN 14 15 1 Y 1 A SER 14 ? A SER 15 16 1 Y 1 A LEU 15 ? A LEU 16 17 1 Y 1 A SER 16 ? A SER 17 18 1 Y 1 A ASP 17 ? A ASP 18 19 1 Y 1 A HIS 18 ? A HIS 19 20 1 Y 1 A SER 19 ? A SER 20 21 1 Y 1 A LEU 20 ? A LEU 21 22 1 Y 1 A GLY 21 ? A GLY 22 23 1 Y 1 A ILE 22 ? A ILE 23 24 1 Y 1 A SER 23 ? A SER 24 25 1 Y 1 A ARG 24 ? A ARG 25 26 1 Y 1 A SER 25 ? A SER 26 27 1 Y 1 A LYS 26 ? A LYS 27 28 1 Y 1 A THR 27 ? A THR 28 29 1 Y 1 A PRO 28 ? A PRO 29 30 1 Y 1 A VAL 29 ? A VAL 30 31 1 Y 1 A VAL 89 ? A VAL 90 32 1 Y 1 A GLN 90 ? A GLN 91 33 1 Y 1 A SER 91 ? A SER 92 34 1 Y 1 A GLY 92 ? A GLY 93 35 1 Y 1 A ASP 93 ? A ASP 94 36 1 Y 1 A ILE 94 ? A ILE 95 37 1 Y 1 A ALA 95 ? A ALA 96 38 1 Y 1 A SER 96 ? A SER 97 39 1 Y 1 B GLY 0 ? B GLY 1 40 1 Y 1 B MET 1 ? B MET 2 41 1 Y 1 B LYS 2 ? B LYS 3 42 1 Y 1 B ALA 3 ? B ALA 4 43 1 Y 1 B PHE 4 ? B PHE 5 44 1 Y 1 B SER 5 ? B SER 6 45 1 Y 1 B PRO 6 ? B PRO 7 46 1 Y 1 B VAL 7 ? B VAL 8 47 1 Y 1 B ARG 8 ? B ARG 9 48 1 Y 1 B SER 9 ? B SER 10 49 1 Y 1 B VAL 10 ? B VAL 11 50 1 Y 1 B ARG 11 ? B ARG 12 51 1 Y 1 B LYS 12 ? B LYS 13 52 1 Y 1 B ASN 13 ? B ASN 14 53 1 Y 1 B SER 14 ? B SER 15 54 1 Y 1 B LEU 15 ? B LEU 16 55 1 Y 1 B SER 16 ? B SER 17 56 1 Y 1 B ASP 17 ? B ASP 18 57 1 Y 1 B HIS 18 ? B HIS 19 58 1 Y 1 B SER 19 ? B SER 20 59 1 Y 1 B LEU 20 ? B LEU 21 60 1 Y 1 B GLY 21 ? B GLY 22 61 1 Y 1 B ILE 22 ? B ILE 23 62 1 Y 1 B SER 23 ? B SER 24 63 1 Y 1 B ARG 24 ? B ARG 25 64 1 Y 1 B SER 25 ? B SER 26 65 1 Y 1 B LYS 26 ? B LYS 27 66 1 Y 1 B THR 27 ? B THR 28 67 1 Y 1 B PRO 28 ? B PRO 29 68 1 Y 1 B VAL 29 ? B VAL 30 69 1 Y 1 B ASP 30 ? B ASP 31 70 1 Y 1 B ASP 31 ? B ASP 32 71 1 Y 1 B PRO 32 ? B PRO 33 72 1 Y 1 B MET 33 ? B MET 34 73 1 Y 1 B SER 34 ? B SER 35 74 1 Y 1 B LEU 83 ? B LEU 84 75 1 Y 1 B LYS 84 ? B LYS 85 76 1 Y 1 B PRO 85 ? B PRO 86 77 1 Y 1 B SER 86 ? B SER 87 78 1 Y 1 B PHE 87 ? B PHE 88 79 1 Y 1 B LEU 88 ? B LEU 89 80 1 Y 1 B VAL 89 ? B VAL 90 81 1 Y 1 B GLN 90 ? B GLN 91 82 1 Y 1 B SER 91 ? B SER 92 83 1 Y 1 B GLY 92 ? B GLY 93 84 1 Y 1 B ASP 93 ? B ASP 94 85 1 Y 1 B ILE 94 ? B ILE 95 86 1 Y 1 B ALA 95 ? B ALA 96 87 1 Y 1 B SER 96 ? B SER 97 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'ACETATE ION' ACT 4 water HOH #