data_4B23 # _entry.id 4B23 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4B23 PDBE EBI-53325 WWPDB D_1290053325 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4B21 unspecified 'UNPRECEDENTED SCULPTING OF DNA AT ABASIC SITES BY DNA GLYCOSYLASE HOMOLOG MAG2' PDB 4B22 unspecified 'UNPRECEDENTED SCULPTING OF DNA AT ABASIC SITES BY DNA GLYCOSYLASE HOMOLOG MAG2' PDB 4B24 unspecified 'UNPRECEDENTED SCULPTING OF DNA AT ABASIC SITES BY DNA GLYCOSYLASE HOMOLOG MAG2' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4B23 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-07-12 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dalhus, B.' 1 'Nilsen, L.' 2 'Korvald, H.' 3 'Huffman, J.' 4 'Forstrom, R.J.' 5 'McMurray, C.T.' 6 'Alseth, I.' 7 'Tainer, J.A.' 8 'Bjoras, M.' 9 # _citation.id primary _citation.title 'Sculpting of DNA at Abasic Sites by DNA Glycosylase Homolog Mag2.' _citation.journal_abbrev Structure _citation.journal_volume 21 _citation.page_first 154 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23245849 _citation.pdbx_database_id_DOI 10.1016/J.STR.2012.11.004 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Dalhus, B.' 1 primary 'Nilsen, L.' 2 primary 'Korvald, H.' 3 primary 'Huffman, J.' 4 primary 'Forstrom, R.J.' 5 primary 'Mcmurray, C.T.' 6 primary 'Alseth, I.' 7 primary 'Tainer, J.A.' 8 primary 'Bjoras, M.' 9 # _cell.entry_id 4B23 _cell.length_a 68.480 _cell.length_b 84.520 _cell.length_c 125.750 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4B23 _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'MAG2, DNA-3-METHYLADENINE GLYCOSYLASE 2' 26362.113 1 3.2.2.21 ? ? ? 2 polymer syn "5'-D(*GP*CP*TP*AP*CP*(3DR)P*AP*AP*TP*CP*GP)-3'" 3209.101 1 ? ? ? ? 3 polymer syn "5'-D(*CP*GP*AP*TP*TP*GP*GP*TP*AP*GP*CP)-3'" 3389.221 1 ? ? ? ? 4 water nat water 18.015 208 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 '3-METHYLADENINE DNA GLYCOSIDASE 2,3MEA DNA GLYCOSYLASE 2' 2 'ABASIC DNA' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHHHHHSSGLVPRGSHMSKDSDYKRAEKHLSSIDNKWSSLVKKVGPCTLTPHPEHAPYEGIIRAITSQKLSDAATNS IINKFCTQCSDNDEFPTPKQIMETDVETLHECGFSKLKSQEIHIVAEAALNKQIPSKSEIEKMSEEELMESLSKIKGVKR WTIEMYSIFTLGRLDIMPADDSTLKNEAKEFFGLSSKPQTEEVEKLTKPCKPYRTIAAWYLWQIPKLHRKGQ ; ;MGSSHHHHHSSGLVPRGSHMSKDSDYKRAEKHLSSIDNKWSSLVKKVGPCTLTPHPEHAPYEGIIRAITSQKLSDAATNS IINKFCTQCSDNDEFPTPKQIMETDVETLHECGFSKLKSQEIHIVAEAALNKQIPSKSEIEKMSEEELMESLSKIKGVKR WTIEMYSIFTLGRLDIMPADDSTLKNEAKEFFGLSSKPQTEEVEKLTKPCKPYRTIAAWYLWQIPKLHRKGQ ; A ? 2 polydeoxyribonucleotide no yes '(DG)(DC)(DT)(DA)(DC)(3DR)(DA)(DA)(DT)(DC)(DG)' GCTACNAATCG X ? 3 polydeoxyribonucleotide no no '(DC)(DG)(DA)(DT)(DT)(DG)(DG)(DT)(DA)(DG)(DC)' CGATTGGTAGC Y ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 SER n 1 11 SER n 1 12 GLY n 1 13 LEU n 1 14 VAL n 1 15 PRO n 1 16 ARG n 1 17 GLY n 1 18 SER n 1 19 HIS n 1 20 MET n 1 21 SER n 1 22 LYS n 1 23 ASP n 1 24 SER n 1 25 ASP n 1 26 TYR n 1 27 LYS n 1 28 ARG n 1 29 ALA n 1 30 GLU n 1 31 LYS n 1 32 HIS n 1 33 LEU n 1 34 SER n 1 35 SER n 1 36 ILE n 1 37 ASP n 1 38 ASN n 1 39 LYS n 1 40 TRP n 1 41 SER n 1 42 SER n 1 43 LEU n 1 44 VAL n 1 45 LYS n 1 46 LYS n 1 47 VAL n 1 48 GLY n 1 49 PRO n 1 50 CYS n 1 51 THR n 1 52 LEU n 1 53 THR n 1 54 PRO n 1 55 HIS n 1 56 PRO n 1 57 GLU n 1 58 HIS n 1 59 ALA n 1 60 PRO n 1 61 TYR n 1 62 GLU n 1 63 GLY n 1 64 ILE n 1 65 ILE n 1 66 ARG n 1 67 ALA n 1 68 ILE n 1 69 THR n 1 70 SER n 1 71 GLN n 1 72 LYS n 1 73 LEU n 1 74 SER n 1 75 ASP n 1 76 ALA n 1 77 ALA n 1 78 THR n 1 79 ASN n 1 80 SER n 1 81 ILE n 1 82 ILE n 1 83 ASN n 1 84 LYS n 1 85 PHE n 1 86 CYS n 1 87 THR n 1 88 GLN n 1 89 CYS n 1 90 SER n 1 91 ASP n 1 92 ASN n 1 93 ASP n 1 94 GLU n 1 95 PHE n 1 96 PRO n 1 97 THR n 1 98 PRO n 1 99 LYS n 1 100 GLN n 1 101 ILE n 1 102 MET n 1 103 GLU n 1 104 THR n 1 105 ASP n 1 106 VAL n 1 107 GLU n 1 108 THR n 1 109 LEU n 1 110 HIS n 1 111 GLU n 1 112 CYS n 1 113 GLY n 1 114 PHE n 1 115 SER n 1 116 LYS n 1 117 LEU n 1 118 LYS n 1 119 SER n 1 120 GLN n 1 121 GLU n 1 122 ILE n 1 123 HIS n 1 124 ILE n 1 125 VAL n 1 126 ALA n 1 127 GLU n 1 128 ALA n 1 129 ALA n 1 130 LEU n 1 131 ASN n 1 132 LYS n 1 133 GLN n 1 134 ILE n 1 135 PRO n 1 136 SER n 1 137 LYS n 1 138 SER n 1 139 GLU n 1 140 ILE n 1 141 GLU n 1 142 LYS n 1 143 MET n 1 144 SER n 1 145 GLU n 1 146 GLU n 1 147 GLU n 1 148 LEU n 1 149 MET n 1 150 GLU n 1 151 SER n 1 152 LEU n 1 153 SER n 1 154 LYS n 1 155 ILE n 1 156 LYS n 1 157 GLY n 1 158 VAL n 1 159 LYS n 1 160 ARG n 1 161 TRP n 1 162 THR n 1 163 ILE n 1 164 GLU n 1 165 MET n 1 166 TYR n 1 167 SER n 1 168 ILE n 1 169 PHE n 1 170 THR n 1 171 LEU n 1 172 GLY n 1 173 ARG n 1 174 LEU n 1 175 ASP n 1 176 ILE n 1 177 MET n 1 178 PRO n 1 179 ALA n 1 180 ASP n 1 181 ASP n 1 182 SER n 1 183 THR n 1 184 LEU n 1 185 LYS n 1 186 ASN n 1 187 GLU n 1 188 ALA n 1 189 LYS n 1 190 GLU n 1 191 PHE n 1 192 PHE n 1 193 GLY n 1 194 LEU n 1 195 SER n 1 196 SER n 1 197 LYS n 1 198 PRO n 1 199 GLN n 1 200 THR n 1 201 GLU n 1 202 GLU n 1 203 VAL n 1 204 GLU n 1 205 LYS n 1 206 LEU n 1 207 THR n 1 208 LYS n 1 209 PRO n 1 210 CYS n 1 211 LYS n 1 212 PRO n 1 213 TYR n 1 214 ARG n 1 215 THR n 1 216 ILE n 1 217 ALA n 1 218 ALA n 1 219 TRP n 1 220 TYR n 1 221 LEU n 1 222 TRP n 1 223 GLN n 1 224 ILE n 1 225 PRO n 1 226 LYS n 1 227 LEU n 1 228 HIS n 1 229 ARG n 1 230 LYS n 1 231 GLY n 1 232 GLN n 2 1 DG n 2 2 DC n 2 3 DT n 2 4 DA n 2 5 DC n 2 6 3DR n 2 7 DA n 2 8 DA n 2 9 DT n 2 10 DC n 2 11 DG n 3 1 DC n 3 2 DG n 3 3 DA n 3 4 DT n 3 5 DT n 3 6 DG n 3 7 DG n 3 8 DT n 3 9 DA n 3 10 DG n 3 11 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'SCHIZOSACCHAROMYCES POMBE' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4896 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'SYNTHETIC CONSTRUCT' ? 32630 ? 3 1 sample ? ? 'SYNTHETIC CONSTRUCT' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP MAG2_SCHPO 1 ? ? O94468 ? 2 PDB 4B23 2 ? ? 4B23 ? 3 PDB 4B23 3 ? ? 4B23 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4B23 A 20 ? 232 ? O94468 1 ? 213 ? 1 213 2 2 4B23 X 1 ? 11 ? 4B23 1 ? 11 ? 1 11 3 3 4B23 Y 1 ? 11 ? 4B23 12 ? 22 ? 12 22 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4B23 MET A 1 ? UNP O94468 ? ? 'expression tag' -18 1 1 4B23 GLY A 2 ? UNP O94468 ? ? 'expression tag' -17 2 1 4B23 SER A 3 ? UNP O94468 ? ? 'expression tag' -16 3 1 4B23 SER A 4 ? UNP O94468 ? ? 'expression tag' -15 4 1 4B23 HIS A 5 ? UNP O94468 ? ? 'expression tag' -14 5 1 4B23 HIS A 6 ? UNP O94468 ? ? 'expression tag' -13 6 1 4B23 HIS A 7 ? UNP O94468 ? ? 'expression tag' -12 7 1 4B23 HIS A 8 ? UNP O94468 ? ? 'expression tag' -11 8 1 4B23 HIS A 9 ? UNP O94468 ? ? 'expression tag' -10 9 1 4B23 SER A 10 ? UNP O94468 ? ? 'expression tag' -9 10 1 4B23 SER A 11 ? UNP O94468 ? ? 'expression tag' -8 11 1 4B23 GLY A 12 ? UNP O94468 ? ? 'expression tag' -7 12 1 4B23 LEU A 13 ? UNP O94468 ? ? 'expression tag' -6 13 1 4B23 VAL A 14 ? UNP O94468 ? ? 'expression tag' -5 14 1 4B23 PRO A 15 ? UNP O94468 ? ? 'expression tag' -4 15 1 4B23 ARG A 16 ? UNP O94468 ? ? 'expression tag' -3 16 1 4B23 GLY A 17 ? UNP O94468 ? ? 'expression tag' -2 17 1 4B23 SER A 18 ? UNP O94468 ? ? 'expression tag' -1 18 1 4B23 HIS A 19 ? UNP O94468 ? ? 'expression tag' 0 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3DR 'DNA linking' . "1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE" 'ABASIC DIDEOXYRIBOSE' 'C5 H11 O6 P' 198.111 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4B23 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.8 _exptl_crystal.density_percent_sol 56 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.40 M (NH4) H2PO4 (NOT PH ADJUSTED), 6% 1,6-HEXANEDIOL' # _diffrn.id 1 _diffrn.ambient_temp 120 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAXIS IV' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4B23 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.00 _reflns.number_obs 22272 _reflns.number_all ? _reflns.percent_possible_obs 94.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.09 _reflns.pdbx_netI_over_sigmaI 8.40 _reflns.B_iso_Wilson_estimate 29.8 _reflns.pdbx_redundancy 3.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 93.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.21 _reflns_shell.meanI_over_sigI_obs 2.70 _reflns_shell.pdbx_redundancy 3.7 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4B23 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 21185 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF 0 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs 88.4 _refine.ls_R_factor_obs 0.2481 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2481 _refine.ls_R_factor_R_free 0.2898 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.3 _refine.ls_number_reflns_R_free 1087 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 29.8 _refine.aniso_B[1][1] -6.875 _refine.aniso_B[2][2] 3.577 _refine.aniso_B[3][3] 3.299 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol 0.3845 _refine.solvent_model_param_bsol 51.11 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 4B23 _refine_analyze.Luzzati_coordinate_error_obs 0.29 _refine_analyze.Luzzati_sigma_a_obs 0.24 _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free 0.34 _refine_analyze.Luzzati_sigma_a_free 0.24 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1646 _refine_hist.pdbx_number_atoms_nucleic_acid 437 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 208 _refine_hist.number_atoms_total 2291 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.0063 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.185 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 19.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 2.95 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.36 1.5 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.14 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.07 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.10 2.5 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.07 _refine_ls_shell.number_reflns_R_work 2187 _refine_ls_shell.R_factor_R_work 0.298 _refine_ls_shell.percent_reflns_obs 91.9 _refine_ls_shell.R_factor_R_free 0.393 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 4.8 _refine_ls_shell.number_reflns_R_free 111 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 CNS_TOPPAR:PROTEIN_REP.PARAM CNS_TOPPAR:PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP-CUSTOM.PARAM DNA-RNA-CUSTOM.TOP 'X-RAY DIFFRACTION' 3 CNS_TOPPAR:WATER_REP.PARAM CNS_TOPPAR:WATER.TOP 'X-RAY DIFFRACTION' 4 CNS_TOPPAR:ION.PARAM CNS_TOPPAR:ION.TOP # _struct.entry_id 4B23 _struct.title 'Unprecedented sculpting of DNA at abasic sites by DNA glycosylase homolog Mag2' _struct.pdbx_descriptor 'MAG2, DNA-3-METHYLADENINE GLYCOSYLASE 2 (E.C.3.2.2.21)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4B23 _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'HYDROLASE-DNA COMPLEX, HYDROLASE, HELIX-HAIRPIN-HELIX DNA GLYCOSYLASE HOMOLOGUE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 22 ? SER A 34 ? LYS A 3 SER A 15 1 ? 13 HELX_P HELX_P2 2 ASP A 37 ? GLY A 48 ? ASP A 18 GLY A 29 1 ? 12 HELX_P HELX_P3 3 ALA A 59 ? GLN A 71 ? ALA A 40 GLN A 52 1 ? 13 HELX_P HELX_P4 4 SER A 74 ? SER A 90 ? SER A 55 SER A 71 1 ? 17 HELX_P HELX_P5 5 THR A 97 ? GLU A 103 ? THR A 78 GLU A 84 1 ? 7 HELX_P HELX_P6 6 ASP A 105 ? CYS A 112 ? ASP A 86 CYS A 93 1 ? 8 HELX_P HELX_P7 7 SER A 115 ? ASN A 131 ? SER A 96 ASN A 112 1 ? 17 HELX_P HELX_P8 8 SER A 136 ? MET A 143 ? SER A 117 MET A 124 1 ? 8 HELX_P HELX_P9 9 SER A 144 ? SER A 153 ? SER A 125 SER A 134 1 ? 10 HELX_P HELX_P10 10 LYS A 159 ? THR A 170 ? LYS A 140 THR A 151 1 ? 12 HELX_P HELX_P11 11 ASP A 181 ? PHE A 192 ? ASP A 162 PHE A 173 1 ? 12 HELX_P HELX_P12 12 GLN A 199 ? THR A 207 ? GLN A 180 THR A 188 1 ? 9 HELX_P HELX_P13 13 LYS A 208 ? LYS A 211 ? LYS A 189 LYS A 192 5 ? 4 HELX_P HELX_P14 14 TYR A 213 ? ILE A 224 ? TYR A 194 ILE A 205 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? B 3DR 6 P ? ? ? 1_555 B DC 5 "O3'" ? ? X 3DR 6 X DC 5 1_555 ? ? ? ? ? ? ? 1.598 ? covale2 covale ? ? B 3DR 6 "O3'" ? ? ? 1_555 B DA 7 P ? ? X 3DR 6 X DA 7 1_555 ? ? ? ? ? ? ? 1.561 ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 11 N3 ? ? X DG 1 Y DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 11 O2 ? ? X DG 1 Y DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 11 N4 ? ? X DG 1 Y DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 10 N1 ? ? X DC 2 Y DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 10 O6 ? ? X DC 2 Y DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 10 N2 ? ? X DC 2 Y DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? B DT 3 N3 ? ? ? 1_555 C DA 9 N1 ? ? X DT 3 Y DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 9 N6 ? ? X DT 3 Y DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 8 N3 ? ? X DA 4 Y DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 8 O4 ? ? X DA 4 Y DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 7 N1 ? ? X DC 5 Y DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 7 O6 ? ? X DC 5 Y DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 7 N2 ? ? X DC 5 Y DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? B DA 8 N1 ? ? ? 1_555 C DT 4 N3 ? ? X DA 8 Y DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? B DA 8 N6 ? ? ? 1_555 C DT 4 O4 ? ? X DA 8 Y DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 3 N1 ? ? X DT 9 Y DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 3 N6 ? ? X DT 9 Y DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 2 N1 ? ? X DC 10 Y DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 2 O6 ? ? X DC 10 Y DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 2 N2 ? ? X DC 10 Y DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 1 N3 ? ? X DG 11 Y DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 1 O2 ? ? X DG 11 Y DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 1 N4 ? ? X DG 11 Y DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 211 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 192 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 212 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 193 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.68 # _database_PDB_matrix.entry_id 4B23 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4B23 _atom_sites.fract_transf_matrix[1][1] 0.014603 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011832 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007952 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -18 ? ? ? A . n A 1 2 GLY 2 -17 ? ? ? A . n A 1 3 SER 3 -16 ? ? ? A . n A 1 4 SER 4 -15 ? ? ? A . n A 1 5 HIS 5 -14 ? ? ? A . n A 1 6 HIS 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 SER 10 -9 ? ? ? A . n A 1 11 SER 11 -8 ? ? ? A . n A 1 12 GLY 12 -7 ? ? ? A . n A 1 13 LEU 13 -6 ? ? ? A . n A 1 14 VAL 14 -5 ? ? ? A . n A 1 15 PRO 15 -4 ? ? ? A . n A 1 16 ARG 16 -3 ? ? ? A . n A 1 17 GLY 17 -2 ? ? ? A . n A 1 18 SER 18 -1 ? ? ? A . n A 1 19 HIS 19 0 ? ? ? A . n A 1 20 MET 20 1 ? ? ? A . n A 1 21 SER 21 2 ? ? ? A . n A 1 22 LYS 22 3 3 LYS LYS A . n A 1 23 ASP 23 4 4 ASP ASP A . n A 1 24 SER 24 5 5 SER SER A . n A 1 25 ASP 25 6 6 ASP ASP A . n A 1 26 TYR 26 7 7 TYR TYR A . n A 1 27 LYS 27 8 8 LYS LYS A . n A 1 28 ARG 28 9 9 ARG ARG A . n A 1 29 ALA 29 10 10 ALA ALA A . n A 1 30 GLU 30 11 11 GLU GLU A . n A 1 31 LYS 31 12 12 LYS LYS A . n A 1 32 HIS 32 13 13 HIS HIS A . n A 1 33 LEU 33 14 14 LEU LEU A . n A 1 34 SER 34 15 15 SER SER A . n A 1 35 SER 35 16 16 SER SER A . n A 1 36 ILE 36 17 17 ILE ILE A . n A 1 37 ASP 37 18 18 ASP ASP A . n A 1 38 ASN 38 19 19 ASN ASN A . n A 1 39 LYS 39 20 20 LYS LYS A . n A 1 40 TRP 40 21 21 TRP TRP A . n A 1 41 SER 41 22 22 SER SER A . n A 1 42 SER 42 23 23 SER SER A . n A 1 43 LEU 43 24 24 LEU LEU A . n A 1 44 VAL 44 25 25 VAL VAL A . n A 1 45 LYS 45 26 26 LYS LYS A . n A 1 46 LYS 46 27 27 LYS LYS A . n A 1 47 VAL 47 28 28 VAL VAL A . n A 1 48 GLY 48 29 29 GLY GLY A . n A 1 49 PRO 49 30 30 PRO PRO A . n A 1 50 CYS 50 31 31 CYS CYS A . n A 1 51 THR 51 32 32 THR THR A . n A 1 52 LEU 52 33 33 LEU LEU A . n A 1 53 THR 53 34 34 THR THR A . n A 1 54 PRO 54 35 35 PRO PRO A . n A 1 55 HIS 55 36 36 HIS HIS A . n A 1 56 PRO 56 37 37 PRO PRO A . n A 1 57 GLU 57 38 38 GLU GLU A . n A 1 58 HIS 58 39 39 HIS HIS A . n A 1 59 ALA 59 40 40 ALA ALA A . n A 1 60 PRO 60 41 41 PRO PRO A . n A 1 61 TYR 61 42 42 TYR TYR A . n A 1 62 GLU 62 43 43 GLU GLU A . n A 1 63 GLY 63 44 44 GLY GLY A . n A 1 64 ILE 64 45 45 ILE ILE A . n A 1 65 ILE 65 46 46 ILE ILE A . n A 1 66 ARG 66 47 47 ARG ARG A . n A 1 67 ALA 67 48 48 ALA ALA A . n A 1 68 ILE 68 49 49 ILE ILE A . n A 1 69 THR 69 50 50 THR THR A . n A 1 70 SER 70 51 51 SER SER A . n A 1 71 GLN 71 52 52 GLN GLN A . n A 1 72 LYS 72 53 53 LYS LYS A . n A 1 73 LEU 73 54 54 LEU LEU A . n A 1 74 SER 74 55 55 SER SER A . n A 1 75 ASP 75 56 56 ASP ASP A . n A 1 76 ALA 76 57 57 ALA ALA A . n A 1 77 ALA 77 58 58 ALA ALA A . n A 1 78 THR 78 59 59 THR THR A . n A 1 79 ASN 79 60 60 ASN ASN A . n A 1 80 SER 80 61 61 SER SER A . n A 1 81 ILE 81 62 62 ILE ILE A . n A 1 82 ILE 82 63 63 ILE ILE A . n A 1 83 ASN 83 64 64 ASN ASN A . n A 1 84 LYS 84 65 65 LYS LYS A . n A 1 85 PHE 85 66 66 PHE PHE A . n A 1 86 CYS 86 67 67 CYS CYS A . n A 1 87 THR 87 68 68 THR THR A . n A 1 88 GLN 88 69 69 GLN GLN A . n A 1 89 CYS 89 70 70 CYS CYS A . n A 1 90 SER 90 71 71 SER SER A . n A 1 91 ASP 91 72 72 ASP ASP A . n A 1 92 ASN 92 73 73 ASN ASN A . n A 1 93 ASP 93 74 74 ASP ASP A . n A 1 94 GLU 94 75 75 GLU GLU A . n A 1 95 PHE 95 76 76 PHE PHE A . n A 1 96 PRO 96 77 77 PRO PRO A . n A 1 97 THR 97 78 78 THR THR A . n A 1 98 PRO 98 79 79 PRO PRO A . n A 1 99 LYS 99 80 80 LYS LYS A . n A 1 100 GLN 100 81 81 GLN GLN A . n A 1 101 ILE 101 82 82 ILE ILE A . n A 1 102 MET 102 83 83 MET MET A . n A 1 103 GLU 103 84 84 GLU GLU A . n A 1 104 THR 104 85 85 THR THR A . n A 1 105 ASP 105 86 86 ASP ASP A . n A 1 106 VAL 106 87 87 VAL VAL A . n A 1 107 GLU 107 88 88 GLU GLU A . n A 1 108 THR 108 89 89 THR THR A . n A 1 109 LEU 109 90 90 LEU LEU A . n A 1 110 HIS 110 91 91 HIS HIS A . n A 1 111 GLU 111 92 92 GLU GLU A . n A 1 112 CYS 112 93 93 CYS CYS A . n A 1 113 GLY 113 94 94 GLY GLY A . n A 1 114 PHE 114 95 95 PHE PHE A . n A 1 115 SER 115 96 96 SER SER A . n A 1 116 LYS 116 97 97 LYS LYS A . n A 1 117 LEU 117 98 98 LEU LEU A . n A 1 118 LYS 118 99 99 LYS LYS A . n A 1 119 SER 119 100 100 SER SER A . n A 1 120 GLN 120 101 101 GLN GLN A . n A 1 121 GLU 121 102 102 GLU GLU A . n A 1 122 ILE 122 103 103 ILE ILE A . n A 1 123 HIS 123 104 104 HIS HIS A . n A 1 124 ILE 124 105 105 ILE ILE A . n A 1 125 VAL 125 106 106 VAL VAL A . n A 1 126 ALA 126 107 107 ALA ALA A . n A 1 127 GLU 127 108 108 GLU GLU A . n A 1 128 ALA 128 109 109 ALA ALA A . n A 1 129 ALA 129 110 110 ALA ALA A . n A 1 130 LEU 130 111 111 LEU LEU A . n A 1 131 ASN 131 112 112 ASN ASN A . n A 1 132 LYS 132 113 113 LYS LYS A . n A 1 133 GLN 133 114 114 GLN GLN A . n A 1 134 ILE 134 115 115 ILE ILE A . n A 1 135 PRO 135 116 116 PRO PRO A . n A 1 136 SER 136 117 117 SER SER A . n A 1 137 LYS 137 118 118 LYS LYS A . n A 1 138 SER 138 119 119 SER SER A . n A 1 139 GLU 139 120 120 GLU GLU A . n A 1 140 ILE 140 121 121 ILE ILE A . n A 1 141 GLU 141 122 122 GLU GLU A . n A 1 142 LYS 142 123 123 LYS LYS A . n A 1 143 MET 143 124 124 MET MET A . n A 1 144 SER 144 125 125 SER SER A . n A 1 145 GLU 145 126 126 GLU GLU A . n A 1 146 GLU 146 127 127 GLU GLU A . n A 1 147 GLU 147 128 128 GLU GLU A . n A 1 148 LEU 148 129 129 LEU LEU A . n A 1 149 MET 149 130 130 MET MET A . n A 1 150 GLU 150 131 131 GLU GLU A . n A 1 151 SER 151 132 132 SER SER A . n A 1 152 LEU 152 133 133 LEU LEU A . n A 1 153 SER 153 134 134 SER SER A . n A 1 154 LYS 154 135 135 LYS LYS A . n A 1 155 ILE 155 136 136 ILE ILE A . n A 1 156 LYS 156 137 137 LYS LYS A . n A 1 157 GLY 157 138 138 GLY GLY A . n A 1 158 VAL 158 139 139 VAL VAL A . n A 1 159 LYS 159 140 140 LYS LYS A . n A 1 160 ARG 160 141 141 ARG ARG A . n A 1 161 TRP 161 142 142 TRP TRP A . n A 1 162 THR 162 143 143 THR THR A . n A 1 163 ILE 163 144 144 ILE ILE A . n A 1 164 GLU 164 145 145 GLU GLU A . n A 1 165 MET 165 146 146 MET MET A . n A 1 166 TYR 166 147 147 TYR TYR A . n A 1 167 SER 167 148 148 SER SER A . n A 1 168 ILE 168 149 149 ILE ILE A . n A 1 169 PHE 169 150 150 PHE PHE A . n A 1 170 THR 170 151 151 THR THR A . n A 1 171 LEU 171 152 152 LEU LEU A . n A 1 172 GLY 172 153 153 GLY GLY A . n A 1 173 ARG 173 154 154 ARG ARG A . n A 1 174 LEU 174 155 155 LEU LEU A . n A 1 175 ASP 175 156 156 ASP ASP A . n A 1 176 ILE 176 157 157 ILE ILE A . n A 1 177 MET 177 158 158 MET MET A . n A 1 178 PRO 178 159 159 PRO PRO A . n A 1 179 ALA 179 160 160 ALA ALA A . n A 1 180 ASP 180 161 161 ASP ASP A . n A 1 181 ASP 181 162 162 ASP ASP A . n A 1 182 SER 182 163 163 SER SER A . n A 1 183 THR 183 164 164 THR THR A . n A 1 184 LEU 184 165 165 LEU LEU A . n A 1 185 LYS 185 166 166 LYS LYS A . n A 1 186 ASN 186 167 167 ASN ASN A . n A 1 187 GLU 187 168 168 GLU GLU A . n A 1 188 ALA 188 169 169 ALA ALA A . n A 1 189 LYS 189 170 170 LYS LYS A . n A 1 190 GLU 190 171 171 GLU GLU A . n A 1 191 PHE 191 172 172 PHE PHE A . n A 1 192 PHE 192 173 173 PHE PHE A . n A 1 193 GLY 193 174 174 GLY GLY A . n A 1 194 LEU 194 175 175 LEU LEU A . n A 1 195 SER 195 176 176 SER SER A . n A 1 196 SER 196 177 177 SER SER A . n A 1 197 LYS 197 178 178 LYS LYS A . n A 1 198 PRO 198 179 179 PRO PRO A . n A 1 199 GLN 199 180 180 GLN GLN A . n A 1 200 THR 200 181 181 THR THR A . n A 1 201 GLU 201 182 182 GLU GLU A . n A 1 202 GLU 202 183 183 GLU GLU A . n A 1 203 VAL 203 184 184 VAL VAL A . n A 1 204 GLU 204 185 185 GLU GLU A . n A 1 205 LYS 205 186 186 LYS LYS A . n A 1 206 LEU 206 187 187 LEU LEU A . n A 1 207 THR 207 188 188 THR THR A . n A 1 208 LYS 208 189 189 LYS LYS A . n A 1 209 PRO 209 190 190 PRO PRO A . n A 1 210 CYS 210 191 191 CYS CYS A . n A 1 211 LYS 211 192 192 LYS LYS A . n A 1 212 PRO 212 193 193 PRO PRO A . n A 1 213 TYR 213 194 194 TYR TYR A . n A 1 214 ARG 214 195 195 ARG ARG A . n A 1 215 THR 215 196 196 THR THR A . n A 1 216 ILE 216 197 197 ILE ILE A . n A 1 217 ALA 217 198 198 ALA ALA A . n A 1 218 ALA 218 199 199 ALA ALA A . n A 1 219 TRP 219 200 200 TRP TRP A . n A 1 220 TYR 220 201 201 TYR TYR A . n A 1 221 LEU 221 202 202 LEU LEU A . n A 1 222 TRP 222 203 203 TRP TRP A . n A 1 223 GLN 223 204 204 GLN GLN A . n A 1 224 ILE 224 205 205 ILE ILE A . n A 1 225 PRO 225 206 206 PRO PRO A . n A 1 226 LYS 226 207 207 LYS LYS A . n A 1 227 LEU 227 208 208 LEU LEU A . n A 1 228 HIS 228 209 209 HIS HIS A . n A 1 229 ARG 229 210 ? ? ? A . n A 1 230 LYS 230 211 ? ? ? A . n A 1 231 GLY 231 212 ? ? ? A . n A 1 232 GLN 232 213 ? ? ? A . n B 2 1 DG 1 1 1 DG DG X . n B 2 2 DC 2 2 2 DC DC X . n B 2 3 DT 3 3 3 DT DT X . n B 2 4 DA 4 4 4 DA DA X . n B 2 5 DC 5 5 5 DC DC X . n B 2 6 3DR 6 6 6 3DR 3DR X . n B 2 7 DA 7 7 7 DA DA X . n B 2 8 DA 8 8 8 DA DA X . n B 2 9 DT 9 9 9 DT DT X . n B 2 10 DC 10 10 10 DC DC X . n B 2 11 DG 11 11 11 DG DG X . n C 3 1 DC 1 12 12 DC DC Y . n C 3 2 DG 2 13 13 DG DG Y . n C 3 3 DA 3 14 14 DA DA Y . n C 3 4 DT 4 15 15 DT DT Y . n C 3 5 DT 5 16 16 DT DT Y . n C 3 6 DG 6 17 17 DG DG Y . n C 3 7 DG 7 18 18 DG DG Y . n C 3 8 DT 8 19 19 DT DT Y . n C 3 9 DA 9 20 20 DA DA Y . n C 3 10 DG 10 21 21 DG DG Y . n C 3 11 DC 11 22 22 DC DC Y . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . D 4 HOH 65 2065 2065 HOH HOH A . D 4 HOH 66 2066 2066 HOH HOH A . D 4 HOH 67 2067 2067 HOH HOH A . D 4 HOH 68 2068 2068 HOH HOH A . D 4 HOH 69 2069 2069 HOH HOH A . D 4 HOH 70 2070 2070 HOH HOH A . D 4 HOH 71 2071 2071 HOH HOH A . D 4 HOH 72 2072 2072 HOH HOH A . D 4 HOH 73 2073 2073 HOH HOH A . D 4 HOH 74 2074 2074 HOH HOH A . D 4 HOH 75 2075 2075 HOH HOH A . D 4 HOH 76 2076 2076 HOH HOH A . D 4 HOH 77 2077 2077 HOH HOH A . D 4 HOH 78 2078 2078 HOH HOH A . D 4 HOH 79 2079 2079 HOH HOH A . D 4 HOH 80 2080 2080 HOH HOH A . D 4 HOH 81 2081 2081 HOH HOH A . D 4 HOH 82 2082 2082 HOH HOH A . D 4 HOH 83 2083 2083 HOH HOH A . D 4 HOH 84 2084 2084 HOH HOH A . D 4 HOH 85 2085 2085 HOH HOH A . D 4 HOH 86 2086 2086 HOH HOH A . D 4 HOH 87 2087 2087 HOH HOH A . D 4 HOH 88 2088 2088 HOH HOH A . D 4 HOH 89 2089 2089 HOH HOH A . D 4 HOH 90 2090 2090 HOH HOH A . D 4 HOH 91 2091 2091 HOH HOH A . D 4 HOH 92 2092 2092 HOH HOH A . D 4 HOH 93 2093 2093 HOH HOH A . D 4 HOH 94 2094 2094 HOH HOH A . D 4 HOH 95 2095 2095 HOH HOH A . D 4 HOH 96 2096 2096 HOH HOH A . D 4 HOH 97 2097 2097 HOH HOH A . D 4 HOH 98 2098 2098 HOH HOH A . D 4 HOH 99 2099 2099 HOH HOH A . D 4 HOH 100 2100 2100 HOH HOH A . D 4 HOH 101 2101 2101 HOH HOH A . D 4 HOH 102 2102 2102 HOH HOH A . D 4 HOH 103 2103 2103 HOH HOH A . D 4 HOH 104 2104 2104 HOH HOH A . D 4 HOH 105 2105 2105 HOH HOH A . D 4 HOH 106 2106 2106 HOH HOH A . D 4 HOH 107 2107 2107 HOH HOH A . D 4 HOH 108 2108 2108 HOH HOH A . D 4 HOH 109 2109 2109 HOH HOH A . D 4 HOH 110 2110 2110 HOH HOH A . D 4 HOH 111 2111 2111 HOH HOH A . D 4 HOH 112 2112 2112 HOH HOH A . D 4 HOH 113 2113 2113 HOH HOH A . D 4 HOH 114 2114 2114 HOH HOH A . D 4 HOH 115 2115 2115 HOH HOH A . D 4 HOH 116 2116 2116 HOH HOH A . D 4 HOH 117 2117 2117 HOH HOH A . D 4 HOH 118 2118 2118 HOH HOH A . D 4 HOH 119 2119 2119 HOH HOH A . D 4 HOH 120 2120 2120 HOH HOH A . D 4 HOH 121 2121 2121 HOH HOH A . D 4 HOH 122 2122 2122 HOH HOH A . D 4 HOH 123 2123 2123 HOH HOH A . D 4 HOH 124 2124 2124 HOH HOH A . D 4 HOH 125 2125 2125 HOH HOH A . D 4 HOH 126 2126 2126 HOH HOH A . D 4 HOH 127 2127 2127 HOH HOH A . D 4 HOH 128 2128 2128 HOH HOH A . D 4 HOH 129 2129 2129 HOH HOH A . D 4 HOH 130 2130 2130 HOH HOH A . D 4 HOH 131 2131 2131 HOH HOH A . D 4 HOH 132 2132 2132 HOH HOH A . D 4 HOH 133 2133 2133 HOH HOH A . D 4 HOH 134 2134 2134 HOH HOH A . D 4 HOH 135 2135 2135 HOH HOH A . D 4 HOH 136 2136 2136 HOH HOH A . D 4 HOH 137 2137 2137 HOH HOH A . D 4 HOH 138 2138 2138 HOH HOH A . D 4 HOH 139 2139 2139 HOH HOH A . D 4 HOH 140 2140 2140 HOH HOH A . D 4 HOH 141 2141 2141 HOH HOH A . D 4 HOH 142 2142 2142 HOH HOH A . D 4 HOH 143 2143 2143 HOH HOH A . D 4 HOH 144 2144 2144 HOH HOH A . D 4 HOH 145 2145 2145 HOH HOH A . D 4 HOH 146 2146 2146 HOH HOH A . D 4 HOH 147 2147 2147 HOH HOH A . D 4 HOH 148 2148 2148 HOH HOH A . D 4 HOH 149 2149 2149 HOH HOH A . D 4 HOH 150 2150 2150 HOH HOH A . D 4 HOH 151 2151 2151 HOH HOH A . D 4 HOH 152 2152 2152 HOH HOH A . D 4 HOH 153 2153 2153 HOH HOH A . D 4 HOH 154 2154 2154 HOH HOH A . D 4 HOH 155 2155 2155 HOH HOH A . D 4 HOH 156 2156 2156 HOH HOH A . D 4 HOH 157 2157 2157 HOH HOH A . D 4 HOH 158 2158 2158 HOH HOH A . D 4 HOH 159 2159 2159 HOH HOH A . D 4 HOH 160 2160 2160 HOH HOH A . D 4 HOH 161 2161 2161 HOH HOH A . D 4 HOH 162 2162 2162 HOH HOH A . D 4 HOH 163 2163 2163 HOH HOH A . D 4 HOH 164 2164 2164 HOH HOH A . D 4 HOH 165 2165 2165 HOH HOH A . D 4 HOH 166 2166 2166 HOH HOH A . D 4 HOH 167 2167 2167 HOH HOH A . D 4 HOH 168 2168 2168 HOH HOH A . E 4 HOH 1 2001 2001 HOH HOH X . E 4 HOH 2 2002 2002 HOH HOH X . E 4 HOH 3 2003 2003 HOH HOH X . E 4 HOH 4 2004 2004 HOH HOH X . E 4 HOH 5 2005 2005 HOH HOH X . E 4 HOH 6 2006 2006 HOH HOH X . E 4 HOH 7 2007 2007 HOH HOH X . E 4 HOH 8 2008 2008 HOH HOH X . E 4 HOH 9 2009 2009 HOH HOH X . E 4 HOH 10 2010 2010 HOH HOH X . E 4 HOH 11 2011 2011 HOH HOH X . E 4 HOH 12 2012 2012 HOH HOH X . E 4 HOH 13 2013 2013 HOH HOH X . E 4 HOH 14 2014 2014 HOH HOH X . E 4 HOH 15 2015 2015 HOH HOH X . E 4 HOH 16 2016 2016 HOH HOH X . E 4 HOH 17 2017 2017 HOH HOH X . E 4 HOH 18 2018 2018 HOH HOH X . E 4 HOH 19 2019 2019 HOH HOH X . F 4 HOH 1 2001 2001 HOH HOH Y . F 4 HOH 2 2002 2002 HOH HOH Y . F 4 HOH 3 2003 2003 HOH HOH Y . F 4 HOH 4 2004 2004 HOH HOH Y . F 4 HOH 5 2005 2005 HOH HOH Y . F 4 HOH 6 2006 2006 HOH HOH Y . F 4 HOH 7 2007 2007 HOH HOH Y . F 4 HOH 8 2008 2008 HOH HOH Y . F 4 HOH 9 2009 2009 HOH HOH Y . F 4 HOH 10 2010 2010 HOH HOH Y . F 4 HOH 11 2011 2011 HOH HOH Y . F 4 HOH 12 2012 2012 HOH HOH Y . F 4 HOH 13 2013 2013 HOH HOH Y . F 4 HOH 14 2014 2014 HOH HOH Y . F 4 HOH 15 2015 2015 HOH HOH Y . F 4 HOH 16 2016 2016 HOH HOH Y . F 4 HOH 17 2017 2017 HOH HOH Y . F 4 HOH 18 2018 2018 HOH HOH Y . F 4 HOH 19 2019 2019 HOH HOH Y . F 4 HOH 20 2020 2020 HOH HOH Y . F 4 HOH 21 2021 2021 HOH HOH Y . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3200 ? 1 MORE -21.6 ? 1 'SSA (A^2)' 13320 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2098 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-01-09 2 'Structure model' 1 1 2013-01-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 CrystalClear 'data reduction' . ? 2 CrystalClear 'data scaling' . ? 3 CNS phasing . ? 4 # _pdbx_entry_details.entry_id 4B23 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;CRYSTALLIZED PROTEIN CONTAIN N-TERMINAL UNCLEAVED HEXSAHISTIDINE TAG (MGSSHHHHHSSGLVPRGSH) ; # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 18 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2016 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.08 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 2152 ? ? 1_555 O A HOH 2152 ? ? 2_555 1.66 2 1 O A HOH 2093 ? ? 1_555 O A HOH 2093 ? ? 3_555 1.89 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 17 ? ? -99.21 -152.61 2 1 ASN A 73 ? ? -140.48 33.25 3 1 ASP A 74 ? ? 56.75 5.19 4 1 LYS A 140 ? ? -131.80 -157.92 5 1 THR A 151 ? ? -105.56 -60.86 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 209 ? CA ? A HIS 228 CA 2 1 Y 1 A HIS 209 ? C ? A HIS 228 C 3 1 Y 1 A HIS 209 ? O ? A HIS 228 O 4 1 Y 1 A HIS 209 ? CB ? A HIS 228 CB 5 1 Y 1 A HIS 209 ? CG ? A HIS 228 CG 6 1 Y 1 A HIS 209 ? ND1 ? A HIS 228 ND1 7 1 Y 1 A HIS 209 ? CD2 ? A HIS 228 CD2 8 1 Y 1 A HIS 209 ? CE1 ? A HIS 228 CE1 9 1 Y 1 A HIS 209 ? NE2 ? A HIS 228 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -18 ? A MET 1 2 1 Y 1 A GLY -17 ? A GLY 2 3 1 Y 1 A SER -16 ? A SER 3 4 1 Y 1 A SER -15 ? A SER 4 5 1 Y 1 A HIS -14 ? A HIS 5 6 1 Y 1 A HIS -13 ? A HIS 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 10 1 Y 1 A SER -9 ? A SER 10 11 1 Y 1 A SER -8 ? A SER 11 12 1 Y 1 A GLY -7 ? A GLY 12 13 1 Y 1 A LEU -6 ? A LEU 13 14 1 Y 1 A VAL -5 ? A VAL 14 15 1 Y 1 A PRO -4 ? A PRO 15 16 1 Y 1 A ARG -3 ? A ARG 16 17 1 Y 1 A GLY -2 ? A GLY 17 18 1 Y 1 A SER -1 ? A SER 18 19 1 Y 1 A HIS 0 ? A HIS 19 20 1 Y 1 A MET 1 ? A MET 20 21 1 Y 1 A SER 2 ? A SER 21 22 1 Y 1 A ARG 210 ? A ARG 229 23 1 Y 1 A LYS 211 ? A LYS 230 24 1 Y 1 A GLY 212 ? A GLY 231 25 1 Y 1 A GLN 213 ? A GLN 232 # _ndb_struct_conf_na.entry_id 4B23 _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 11 1_555 -0.684 -0.498 0.172 -9.042 -2.581 -1.343 1 X_DG1:DC22_Y X 1 ? Y 22 ? 19 1 1 B DC 2 1_555 C DG 10 1_555 0.132 -0.183 0.054 -4.414 -13.807 0.971 2 X_DC2:DG21_Y X 2 ? Y 21 ? 19 1 1 B DT 3 1_555 C DA 9 1_555 0.344 -0.329 0.153 0.812 -15.133 0.225 3 X_DT3:DA20_Y X 3 ? Y 20 ? 20 1 1 B DA 4 1_555 C DT 8 1_555 -0.124 0.012 0.275 0.787 -5.900 -1.317 4 X_DA4:DT19_Y X 4 ? Y 19 ? 20 1 1 B DC 5 1_555 C DG 7 1_555 0.320 0.036 0.035 15.545 -7.279 -1.103 5 X_DC5:DG18_Y X 5 ? Y 18 ? 19 1 1 B DA 8 1_555 C DT 4 1_555 -0.223 0.072 -0.187 -21.187 2.092 6.367 6 X_DA8:DT15_Y X 8 ? Y 15 ? 20 1 1 B DT 9 1_555 C DA 3 1_555 -0.210 -0.167 -0.120 -1.099 -3.177 3.408 7 X_DT9:DA14_Y X 9 ? Y 14 ? 20 1 1 B DC 10 1_555 C DG 2 1_555 0.238 -0.169 -0.042 -0.945 -5.397 1.709 8 X_DC10:DG13_Y X 10 ? Y 13 ? 19 1 1 B DG 11 1_555 C DC 1 1_555 0.031 -0.204 0.208 6.554 -19.280 0.443 9 X_DG11:DC12_Y X 11 ? Y 12 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 11 1_555 B DC 2 1_555 C DG 10 1_555 -0.617 -0.559 3.250 0.867 1.613 38.940 -1.030 1.029 3.212 2.418 -1.300 38.981 1 XX_DG1DC2:DG21DC22_YY X 1 ? Y 22 ? X 2 ? Y 21 ? 1 B DC 2 1_555 C DG 10 1_555 B DT 3 1_555 C DA 9 1_555 0.051 0.301 3.210 -0.311 6.619 29.118 -0.781 -0.162 3.198 12.953 0.608 29.847 2 XX_DC2DT3:DA20DG21_YY X 2 ? Y 21 ? X 3 ? Y 20 ? 1 B DT 3 1_555 C DA 9 1_555 B DA 4 1_555 C DT 8 1_555 0.142 2.091 3.236 -3.083 -9.199 47.131 3.241 -0.400 2.791 -11.363 3.808 48.063 3 XX_DT3DA4:DT19DA20_YY X 3 ? Y 20 ? X 4 ? Y 19 ? 1 B DA 4 1_555 C DT 8 1_555 B DC 5 1_555 C DG 7 1_555 -0.069 -0.081 2.998 2.338 5.038 26.617 -1.330 0.684 2.916 10.794 -5.009 27.180 4 XX_DA4DC5:DG18DT19_YY X 4 ? Y 19 ? X 5 ? Y 18 ? 1 B DA 8 1_555 C DT 4 1_555 B DT 9 1_555 C DA 3 1_555 -0.338 -0.197 2.946 -1.571 8.830 24.768 -2.552 0.365 2.730 19.776 3.519 26.318 5 XX_DA8DT9:DA14DT15_YY X 8 ? Y 15 ? X 9 ? Y 14 ? 1 B DT 9 1_555 C DA 3 1_555 B DC 10 1_555 C DG 2 1_555 0.101 0.115 3.329 2.589 9.869 33.895 -1.305 0.225 3.234 16.470 -4.320 35.354 6 XX_DT9DC10:DG13DA14_YY X 9 ? Y 14 ? X 10 ? Y 13 ? 1 B DC 10 1_555 C DG 2 1_555 B DG 11 1_555 C DC 1 1_555 -0.927 1.632 3.322 -1.286 7.353 34.397 1.524 1.328 3.615 12.255 2.143 35.174 7 XX_DC10DG11:DC12DG13_YY X 10 ? Y 13 ? X 11 ? Y 12 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #