data_4B4S # _entry.id 4B4S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4B4S PDBE EBI-52451 WWPDB D_1290052451 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2V6Q unspecified 'CRYSTAL STRUCTURE OF A BHRF-1 : BIM BH3 COMPLEX' PDB 2VM6 unspecified 'HUMAN BCL-2A1 IN COMPLEX WITH BIM' PDB 2WH6 unspecified 'CRYSTAL STRUCTURE OF ANTI-APOPTOTIC BHRF1 IN COMPLEX WITH THE BIM BH3 DOMAIN' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4B4S _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-08-01 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rautureau, G.J.P.' 1 'Hinds, M.G.' 2 'Kvansakul, M.' 3 # _citation.id primary _citation.title 'The Restricted Binding Repertoire of Bcl-B Leaves Bim as the Universal Bh3-Only Prosurvival Bcl-2 Protein Antagonist.' _citation.journal_abbrev 'Cell Death Dis.' _citation.journal_volume 3 _citation.page_first E443 _citation.page_last ? _citation.year 2012 _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN 2041-4889 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23235460 _citation.pdbx_database_id_DOI 10.1038/CDDIS.2012.178 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Rautureau, G.J.P.' 1 primary 'Yabal, M.' 2 primary 'Yang, H.' 3 primary 'Huang, D.C.S.' 4 primary 'Kvansakul, M.' 5 primary 'Hinds, M.G.' 6 # _cell.entry_id 4B4S _cell.length_a 39.843 _cell.length_b 94.845 _cell.length_c 96.372 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4B4S _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'BCL-2-LIKE PROTEIN 10' 19499.049 1 ? YES 'RESIDUES 2-167' ? 2 polymer man 'BCL-2-LIKE PROTEIN 11' 3418.820 1 ? ? 'RESIDUES 51-76' ? 3 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 1 ? ? ? ? 4 water nat water 18.015 88 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'BCL2-L-10, ANTI-APOPTOTIC PROTEIN NRH, APOPTOSIS REGULATOR BCL-B' 2 'BCL2-L-11, BCL2-INTERACTING MEDIATOR OF CELL DEATH' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GGSADPLRERTELLLADYLGYSAREPGTPEPAPSTPEAAVLRSAAARLRQIHRSFFSAYLGYPGNRFELVALMADSVLSD SPGPTWGRVVTLVTFAGTLLERGPLVTARWKKWGFQPRLKEQEGDVARDSQRLVALLSSRLMGQHRAWLQAQGGWDGFSH FFRTPFPLAENLYFQ ; ;GGSADPLRERTELLLADYLGYSAREPGTPEPAPSTPEAAVLRSAAARLRQIHRSFFSAYLGYPGNRFELVALMADSVLSD SPGPTWGRVVTLVTFAGTLLERGPLVTARWKKWGFQPRLKEQEGDVARDSQRLVALLSSRLMGQHRAWLQAQGGWDGFSH FFRTPFPLAENLYFQ ; A ? 2 'polypeptide(L)' no no GSDMRPEIWIAQELRRIGDEFNAYYARR GSDMRPEIWIAQELRRIGDEFNAYYARR B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLY n 1 3 SER n 1 4 ALA n 1 5 ASP n 1 6 PRO n 1 7 LEU n 1 8 ARG n 1 9 GLU n 1 10 ARG n 1 11 THR n 1 12 GLU n 1 13 LEU n 1 14 LEU n 1 15 LEU n 1 16 ALA n 1 17 ASP n 1 18 TYR n 1 19 LEU n 1 20 GLY n 1 21 TYR n 1 22 SER n 1 23 ALA n 1 24 ARG n 1 25 GLU n 1 26 PRO n 1 27 GLY n 1 28 THR n 1 29 PRO n 1 30 GLU n 1 31 PRO n 1 32 ALA n 1 33 PRO n 1 34 SER n 1 35 THR n 1 36 PRO n 1 37 GLU n 1 38 ALA n 1 39 ALA n 1 40 VAL n 1 41 LEU n 1 42 ARG n 1 43 SER n 1 44 ALA n 1 45 ALA n 1 46 ALA n 1 47 ARG n 1 48 LEU n 1 49 ARG n 1 50 GLN n 1 51 ILE n 1 52 HIS n 1 53 ARG n 1 54 SER n 1 55 PHE n 1 56 PHE n 1 57 SER n 1 58 ALA n 1 59 TYR n 1 60 LEU n 1 61 GLY n 1 62 TYR n 1 63 PRO n 1 64 GLY n 1 65 ASN n 1 66 ARG n 1 67 PHE n 1 68 GLU n 1 69 LEU n 1 70 VAL n 1 71 ALA n 1 72 LEU n 1 73 MET n 1 74 ALA n 1 75 ASP n 1 76 SER n 1 77 VAL n 1 78 LEU n 1 79 SER n 1 80 ASP n 1 81 SER n 1 82 PRO n 1 83 GLY n 1 84 PRO n 1 85 THR n 1 86 TRP n 1 87 GLY n 1 88 ARG n 1 89 VAL n 1 90 VAL n 1 91 THR n 1 92 LEU n 1 93 VAL n 1 94 THR n 1 95 PHE n 1 96 ALA n 1 97 GLY n 1 98 THR n 1 99 LEU n 1 100 LEU n 1 101 GLU n 1 102 ARG n 1 103 GLY n 1 104 PRO n 1 105 LEU n 1 106 VAL n 1 107 THR n 1 108 ALA n 1 109 ARG n 1 110 TRP n 1 111 LYS n 1 112 LYS n 1 113 TRP n 1 114 GLY n 1 115 PHE n 1 116 GLN n 1 117 PRO n 1 118 ARG n 1 119 LEU n 1 120 LYS n 1 121 GLU n 1 122 GLN n 1 123 GLU n 1 124 GLY n 1 125 ASP n 1 126 VAL n 1 127 ALA n 1 128 ARG n 1 129 ASP n 1 130 SER n 1 131 GLN n 1 132 ARG n 1 133 LEU n 1 134 VAL n 1 135 ALA n 1 136 LEU n 1 137 LEU n 1 138 SER n 1 139 SER n 1 140 ARG n 1 141 LEU n 1 142 MET n 1 143 GLY n 1 144 GLN n 1 145 HIS n 1 146 ARG n 1 147 ALA n 1 148 TRP n 1 149 LEU n 1 150 GLN n 1 151 ALA n 1 152 GLN n 1 153 GLY n 1 154 GLY n 1 155 TRP n 1 156 ASP n 1 157 GLY n 1 158 PHE n 1 159 SER n 1 160 HIS n 1 161 PHE n 1 162 PHE n 1 163 ARG n 1 164 THR n 1 165 PRO n 1 166 PHE n 1 167 PRO n 1 168 LEU n 1 169 ALA n 1 170 GLU n 1 171 ASN n 1 172 LEU n 1 173 TYR n 1 174 PHE n 1 175 GLN n 2 1 GLY n 2 2 SER n 2 3 ASP n 2 4 MET n 2 5 ARG n 2 6 PRO n 2 7 GLU n 2 8 ILE n 2 9 TRP n 2 10 ILE n 2 11 ALA n 2 12 GLN n 2 13 GLU n 2 14 LEU n 2 15 ARG n 2 16 ARG n 2 17 ILE n 2 18 GLY n 2 19 ASP n 2 20 GLU n 2 21 PHE n 2 22 ASN n 2 23 ALA n 2 24 TYR n 2 25 TYR n 2 26 ALA n 2 27 ARG n 2 28 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' PLYSS ? ? ? ? ? ? ? ? ? ? PET31B ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' PLYSS ? ? ? ? ? ? PLASMID ? ? ? PET31B ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP B2L10_HUMAN 1 ? ? Q9HD36 ? 2 UNP B2L11_HUMAN 2 ? ? O43521 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4B4S A 4 ? 169 ? Q9HD36 2 ? 167 ? 1 166 2 2 4B4S B 3 ? 28 ? O43521 51 ? 76 ? 51 76 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4B4S GLY A 1 ? UNP Q9HD36 ? ? 'expression tag' -2 1 1 4B4S GLY A 2 ? UNP Q9HD36 ? ? 'expression tag' -1 2 1 4B4S SER A 3 ? UNP Q9HD36 ? ? 'expression tag' 0 3 1 4B4S GLU A 170 ? UNP Q9HD36 ? ? 'expression tag' 167 4 1 4B4S ASN A 171 ? UNP Q9HD36 ? ? 'expression tag' 168 5 1 4B4S LEU A 172 ? UNP Q9HD36 ? ? 'expression tag' 169 6 1 4B4S TYR A 173 ? UNP Q9HD36 ? ? 'expression tag' 170 7 1 4B4S PHE A 174 ? UNP Q9HD36 ? ? 'expression tag' 171 8 1 4B4S GLN A 175 ? UNP Q9HD36 ? ? 'expression tag' 172 9 1 4B4S SER A 22 ? UNP Q9HD36 CYS 20 'engineered mutation' 19 10 1 4B4S SER A 130 ? UNP Q9HD36 CYS 128 'engineered mutation' 127 11 1 4B4S SER A 159 ? UNP Q9HD36 CYS 157 conflict 156 12 2 4B4S GLY B 1 ? UNP O43521 ? ? 'expression tag' 49 13 2 4B4S SER B 2 ? UNP O43521 ? ? 'expression tag' 50 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4B4S _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_percent_sol 38 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M MGCL2, 20 % PEG 400, 20 % PEG 3350, 0.1 M TRIS PH 8.0' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-11-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.957 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_wavelength 0.957 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4B4S _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.92 _reflns.d_resolution_high 1.90 _reflns.number_obs 14793 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.70 _reflns.B_iso_Wilson_estimate 26.72 _reflns.pdbx_redundancy 7.2 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.88 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.50 _reflns_shell.pdbx_redundancy 7.3 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4B4S _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 14768 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.614 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 99.97 _refine.ls_R_factor_obs 0.1974 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1962 _refine.ls_R_factor_R_free 0.2198 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 747 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 37.19 _refine.aniso_B[1][1] -2.4229 _refine.aniso_B[2][2] 8.5362 _refine.aniso_B[3][3] -6.1133 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.400 _refine.solvent_model_param_bsol 80.000 _refine.pdbx_solvent_vdw_probe_radii 0.80 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.47 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.21 _refine.pdbx_overall_phase_error 19.80 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1356 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 88 _refine_hist.number_atoms_total 1457 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 19.614 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 1404 'X-RAY DIFFRACTION' ? f_angle_d 0.877 ? ? 1903 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.954 ? ? 517 'X-RAY DIFFRACTION' ? f_chiral_restr 0.048 ? ? 201 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 249 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.9000 2.0466 2744 0.2417 100.00 0.2551 . . 154 . . 'X-RAY DIFFRACTION' . 2.0466 2.2523 2751 0.2010 100.00 0.2431 . . 152 . . 'X-RAY DIFFRACTION' . 2.2523 2.5775 2792 0.1827 100.00 0.1931 . . 144 . . 'X-RAY DIFFRACTION' . 2.5775 3.2451 2802 0.1822 100.00 0.2189 . . 147 . . 'X-RAY DIFFRACTION' . 3.2451 19.6147 2932 0.1986 100.00 0.2164 . . 150 . . # _struct.entry_id 4B4S _struct.title 'Crystal Structure of a pro-survival Bcl-2:Bim BH3 complex' _struct.pdbx_descriptor 'BCL-2-LIKE PROTEIN 10, BCL-2-LIKE PROTEIN 11' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4B4S _struct_keywords.pdbx_keywords APOPTOSIS _struct_keywords.text APOPTOSIS # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 5 ? ALA A 23 ? ASP A 2 ALA A 20 1 ? 19 HELX_P HELX_P2 2 THR A 35 ? HIS A 52 ? THR A 32 HIS A 49 1 ? 18 HELX_P HELX_P3 3 HIS A 52 ? ALA A 58 ? HIS A 49 ALA A 55 1 ? 7 HELX_P HELX_P4 4 ASN A 65 ? ASP A 80 ? ASN A 62 ASP A 77 1 ? 16 HELX_P HELX_P5 5 THR A 85 ? GLU A 101 ? THR A 82 GLU A 98 1 ? 17 HELX_P HELX_P6 6 GLY A 103 ? ALA A 108 ? GLY A 100 ALA A 105 1 ? 6 HELX_P HELX_P7 7 GLY A 124 ? GLN A 144 ? GLY A 121 GLN A 141 1 ? 21 HELX_P HELX_P8 8 HIS A 145 ? GLN A 152 ? HIS A 142 GLN A 149 1 ? 8 HELX_P HELX_P9 9 GLY A 153 ? ARG A 163 ? GLY A 150 ARG A 160 1 ? 11 HELX_P HELX_P10 10 ARG B 5 ? ALA B 26 ? ARG B 53 ALA B 74 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 81 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 78 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 82 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 79 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.01 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE PG4 A 1165' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ALA A 39 ? ALA A 36 . ? 1_555 ? 2 AC1 6 SER A 43 ? SER A 40 . ? 1_555 ? 3 AC1 6 ALA A 44 ? ALA A 41 . ? 1_555 ? 4 AC1 6 PHE A 162 ? PHE A 159 . ? 1_555 ? 5 AC1 6 ARG A 163 ? ARG A 160 . ? 1_555 ? 6 AC1 6 TYR B 25 ? TYR B 73 . ? 1_555 ? # _database_PDB_matrix.entry_id 4B4S _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4B4S _atom_sites.fract_transf_matrix[1][1] 0.025099 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010544 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010376 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 GLY 2 -1 ? ? ? A . n A 1 3 SER 3 0 ? ? ? A . n A 1 4 ALA 4 1 ? ? ? A . n A 1 5 ASP 5 2 2 ASP ASP A . n A 1 6 PRO 6 3 3 PRO PRO A . n A 1 7 LEU 7 4 4 LEU LEU A . n A 1 8 ARG 8 5 5 ARG ARG A . n A 1 9 GLU 9 6 6 GLU GLU A . n A 1 10 ARG 10 7 7 ARG ARG A . n A 1 11 THR 11 8 8 THR THR A . n A 1 12 GLU 12 9 9 GLU GLU A . n A 1 13 LEU 13 10 10 LEU LEU A . n A 1 14 LEU 14 11 11 LEU LEU A . n A 1 15 LEU 15 12 12 LEU LEU A . n A 1 16 ALA 16 13 13 ALA ALA A . n A 1 17 ASP 17 14 14 ASP ASP A . n A 1 18 TYR 18 15 15 TYR TYR A . n A 1 19 LEU 19 16 16 LEU LEU A . n A 1 20 GLY 20 17 17 GLY GLY A . n A 1 21 TYR 21 18 18 TYR TYR A . n A 1 22 SER 22 19 19 SER SER A . n A 1 23 ALA 23 20 20 ALA ALA A . n A 1 24 ARG 24 21 21 ARG ARG A . n A 1 25 GLU 25 22 22 GLU GLU A . n A 1 26 PRO 26 23 23 PRO PRO A . n A 1 27 GLY 27 24 24 GLY GLY A . n A 1 28 THR 28 25 25 THR THR A . n A 1 29 PRO 29 26 26 PRO PRO A . n A 1 30 GLU 30 27 27 GLU GLU A . n A 1 31 PRO 31 28 28 PRO PRO A . n A 1 32 ALA 32 29 29 ALA ALA A . n A 1 33 PRO 33 30 30 PRO PRO A . n A 1 34 SER 34 31 31 SER SER A . n A 1 35 THR 35 32 32 THR THR A . n A 1 36 PRO 36 33 33 PRO PRO A . n A 1 37 GLU 37 34 34 GLU GLU A . n A 1 38 ALA 38 35 35 ALA ALA A . n A 1 39 ALA 39 36 36 ALA ALA A . n A 1 40 VAL 40 37 37 VAL VAL A . n A 1 41 LEU 41 38 38 LEU LEU A . n A 1 42 ARG 42 39 39 ARG ARG A . n A 1 43 SER 43 40 40 SER SER A . n A 1 44 ALA 44 41 41 ALA ALA A . n A 1 45 ALA 45 42 42 ALA ALA A . n A 1 46 ALA 46 43 43 ALA ALA A . n A 1 47 ARG 47 44 44 ARG ARG A . n A 1 48 LEU 48 45 45 LEU LEU A . n A 1 49 ARG 49 46 46 ARG ARG A . n A 1 50 GLN 50 47 47 GLN GLN A . n A 1 51 ILE 51 48 48 ILE ILE A . n A 1 52 HIS 52 49 49 HIS HIS A . n A 1 53 ARG 53 50 50 ARG ARG A . n A 1 54 SER 54 51 51 SER SER A . n A 1 55 PHE 55 52 52 PHE PHE A . n A 1 56 PHE 56 53 53 PHE PHE A . n A 1 57 SER 57 54 54 SER SER A . n A 1 58 ALA 58 55 55 ALA ALA A . n A 1 59 TYR 59 56 56 TYR TYR A . n A 1 60 LEU 60 57 57 LEU LEU A . n A 1 61 GLY 61 58 58 GLY GLY A . n A 1 62 TYR 62 59 59 TYR TYR A . n A 1 63 PRO 63 60 60 PRO PRO A . n A 1 64 GLY 64 61 61 GLY GLY A . n A 1 65 ASN 65 62 62 ASN ASN A . n A 1 66 ARG 66 63 63 ARG ARG A . n A 1 67 PHE 67 64 64 PHE PHE A . n A 1 68 GLU 68 65 65 GLU GLU A . n A 1 69 LEU 69 66 66 LEU LEU A . n A 1 70 VAL 70 67 67 VAL VAL A . n A 1 71 ALA 71 68 68 ALA ALA A . n A 1 72 LEU 72 69 69 LEU LEU A . n A 1 73 MET 73 70 70 MET MET A . n A 1 74 ALA 74 71 71 ALA ALA A . n A 1 75 ASP 75 72 72 ASP ASP A . n A 1 76 SER 76 73 73 SER SER A . n A 1 77 VAL 77 74 74 VAL VAL A . n A 1 78 LEU 78 75 75 LEU LEU A . n A 1 79 SER 79 76 76 SER SER A . n A 1 80 ASP 80 77 77 ASP ASP A . n A 1 81 SER 81 78 78 SER SER A . n A 1 82 PRO 82 79 79 PRO PRO A . n A 1 83 GLY 83 80 80 GLY GLY A . n A 1 84 PRO 84 81 81 PRO PRO A . n A 1 85 THR 85 82 82 THR THR A . n A 1 86 TRP 86 83 83 TRP TRP A . n A 1 87 GLY 87 84 84 GLY GLY A . n A 1 88 ARG 88 85 85 ARG ARG A . n A 1 89 VAL 89 86 86 VAL VAL A . n A 1 90 VAL 90 87 87 VAL VAL A . n A 1 91 THR 91 88 88 THR THR A . n A 1 92 LEU 92 89 89 LEU LEU A . n A 1 93 VAL 93 90 90 VAL VAL A . n A 1 94 THR 94 91 91 THR THR A . n A 1 95 PHE 95 92 92 PHE PHE A . n A 1 96 ALA 96 93 93 ALA ALA A . n A 1 97 GLY 97 94 94 GLY GLY A . n A 1 98 THR 98 95 95 THR THR A . n A 1 99 LEU 99 96 96 LEU LEU A . n A 1 100 LEU 100 97 97 LEU LEU A . n A 1 101 GLU 101 98 98 GLU GLU A . n A 1 102 ARG 102 99 99 ARG ARG A . n A 1 103 GLY 103 100 100 GLY GLY A . n A 1 104 PRO 104 101 101 PRO PRO A . n A 1 105 LEU 105 102 102 LEU LEU A . n A 1 106 VAL 106 103 103 VAL VAL A . n A 1 107 THR 107 104 104 THR THR A . n A 1 108 ALA 108 105 105 ALA ALA A . n A 1 109 ARG 109 106 ? ? ? A . n A 1 110 TRP 110 107 ? ? ? A . n A 1 111 LYS 111 108 ? ? ? A . n A 1 112 LYS 112 109 ? ? ? A . n A 1 113 TRP 113 110 ? ? ? A . n A 1 114 GLY 114 111 ? ? ? A . n A 1 115 PHE 115 112 ? ? ? A . n A 1 116 GLN 116 113 ? ? ? A . n A 1 117 PRO 117 114 ? ? ? A . n A 1 118 ARG 118 115 ? ? ? A . n A 1 119 LEU 119 116 ? ? ? A . n A 1 120 LYS 120 117 ? ? ? A . n A 1 121 GLU 121 118 ? ? ? A . n A 1 122 GLN 122 119 ? ? ? A . n A 1 123 GLU 123 120 ? ? ? A . n A 1 124 GLY 124 121 121 GLY GLY A . n A 1 125 ASP 125 122 122 ASP ASP A . n A 1 126 VAL 126 123 123 VAL VAL A . n A 1 127 ALA 127 124 124 ALA ALA A . n A 1 128 ARG 128 125 125 ARG ARG A . n A 1 129 ASP 129 126 126 ASP ASP A . n A 1 130 SER 130 127 127 SER SER A . n A 1 131 GLN 131 128 128 GLN GLN A . n A 1 132 ARG 132 129 129 ARG ARG A . n A 1 133 LEU 133 130 130 LEU LEU A . n A 1 134 VAL 134 131 131 VAL VAL A . n A 1 135 ALA 135 132 132 ALA ALA A . n A 1 136 LEU 136 133 133 LEU LEU A . n A 1 137 LEU 137 134 134 LEU LEU A . n A 1 138 SER 138 135 135 SER SER A . n A 1 139 SER 139 136 136 SER SER A . n A 1 140 ARG 140 137 137 ARG ARG A . n A 1 141 LEU 141 138 138 LEU LEU A . n A 1 142 MET 142 139 139 MET MET A . n A 1 143 GLY 143 140 140 GLY GLY A . n A 1 144 GLN 144 141 141 GLN GLN A . n A 1 145 HIS 145 142 142 HIS HIS A . n A 1 146 ARG 146 143 143 ARG ARG A . n A 1 147 ALA 147 144 144 ALA ALA A . n A 1 148 TRP 148 145 145 TRP TRP A . n A 1 149 LEU 149 146 146 LEU LEU A . n A 1 150 GLN 150 147 147 GLN GLN A . n A 1 151 ALA 151 148 148 ALA ALA A . n A 1 152 GLN 152 149 149 GLN GLN A . n A 1 153 GLY 153 150 150 GLY GLY A . n A 1 154 GLY 154 151 151 GLY GLY A . n A 1 155 TRP 155 152 152 TRP TRP A . n A 1 156 ASP 156 153 153 ASP ASP A . n A 1 157 GLY 157 154 154 GLY GLY A . n A 1 158 PHE 158 155 155 PHE PHE A . n A 1 159 SER 159 156 156 SER SER A . n A 1 160 HIS 160 157 157 HIS HIS A . n A 1 161 PHE 161 158 158 PHE PHE A . n A 1 162 PHE 162 159 159 PHE PHE A . n A 1 163 ARG 163 160 160 ARG ARG A . n A 1 164 THR 164 161 161 THR THR A . n A 1 165 PRO 165 162 162 PRO PRO A . n A 1 166 PHE 166 163 163 PHE PHE A . n A 1 167 PRO 167 164 164 PRO PRO A . n A 1 168 LEU 168 165 ? ? ? A . n A 1 169 ALA 169 166 ? ? ? A . n A 1 170 GLU 170 167 ? ? ? A . n A 1 171 ASN 171 168 ? ? ? A . n A 1 172 LEU 172 169 ? ? ? A . n A 1 173 TYR 173 170 ? ? ? A . n A 1 174 PHE 174 171 ? ? ? A . n A 1 175 GLN 175 172 ? ? ? A . n B 2 1 GLY 1 49 ? ? ? B . n B 2 2 SER 2 50 ? ? ? B . n B 2 3 ASP 3 51 ? ? ? B . n B 2 4 MET 4 52 ? ? ? B . n B 2 5 ARG 5 53 53 ARG ARG B . n B 2 6 PRO 6 54 54 PRO PRO B . n B 2 7 GLU 7 55 55 GLU GLU B . n B 2 8 ILE 8 56 56 ILE ILE B . n B 2 9 TRP 9 57 57 TRP TRP B . n B 2 10 ILE 10 58 58 ILE ILE B . n B 2 11 ALA 11 59 59 ALA ALA B . n B 2 12 GLN 12 60 60 GLN GLN B . n B 2 13 GLU 13 61 61 GLU GLU B . n B 2 14 LEU 14 62 62 LEU LEU B . n B 2 15 ARG 15 63 63 ARG ARG B . n B 2 16 ARG 16 64 64 ARG ARG B . n B 2 17 ILE 17 65 65 ILE ILE B . n B 2 18 GLY 18 66 66 GLY GLY B . n B 2 19 ASP 19 67 67 ASP ASP B . n B 2 20 GLU 20 68 68 GLU GLU B . n B 2 21 PHE 21 69 69 PHE PHE B . n B 2 22 ASN 22 70 70 ASN ASN B . n B 2 23 ALA 23 71 71 ALA ALA B . n B 2 24 TYR 24 72 72 TYR TYR B . n B 2 25 TYR 25 73 73 TYR TYR B . n B 2 26 ALA 26 74 74 ALA ALA B . n B 2 27 ARG 27 75 75 ARG ARG B . n B 2 28 ARG 28 76 76 ARG ARG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PG4 1 1165 1165 PG4 PG4 A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . D 4 HOH 65 2065 2065 HOH HOH A . D 4 HOH 66 2066 2066 HOH HOH A . D 4 HOH 67 2067 2067 HOH HOH A . D 4 HOH 68 2068 2068 HOH HOH A . D 4 HOH 69 2069 2069 HOH HOH A . D 4 HOH 70 2070 2070 HOH HOH A . D 4 HOH 71 2071 2071 HOH HOH A . D 4 HOH 72 2072 2072 HOH HOH A . D 4 HOH 73 2073 2073 HOH HOH A . D 4 HOH 74 2074 2074 HOH HOH A . D 4 HOH 75 2075 2075 HOH HOH A . D 4 HOH 76 2076 2076 HOH HOH A . E 4 HOH 1 2001 2001 HOH HOH B . E 4 HOH 2 2002 2002 HOH HOH B . E 4 HOH 3 2003 2003 HOH HOH B . E 4 HOH 4 2004 2004 HOH HOH B . E 4 HOH 5 2005 2005 HOH HOH B . E 4 HOH 6 2006 2006 HOH HOH B . E 4 HOH 7 2007 2007 HOH HOH B . E 4 HOH 8 2008 2008 HOH HOH B . E 4 HOH 9 2009 2009 HOH HOH B . E 4 HOH 10 2010 2010 HOH HOH B . E 4 HOH 11 2011 2011 HOH HOH B . E 4 HOH 12 2012 2012 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2410 ? 1 MORE -14.8 ? 1 'SSA (A^2)' 8700 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 2024 ? D HOH . 2 1 A HOH 2048 ? D HOH . 3 1 A HOH 2067 ? D HOH . # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2013-01-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -2.4957 16.7314 14.1287 0.1470 0.2450 0.1459 0.0114 -0.0392 -0.0125 2.9245 4.3460 4.3650 0.3381 -1.0543 0.3260 0.0217 -0.2587 -0.0918 0.4581 -0.0848 -0.2441 0.1444 0.3113 0.0668 'X-RAY DIFFRACTION' 2 ? refined -7.9850 16.0141 2.9681 0.0986 0.1463 0.1520 0.0108 -0.0012 0.0004 5.0077 4.0056 5.5624 -2.3795 1.4900 -0.9303 0.2555 0.5360 0.2342 -0.3512 -0.3426 0.0295 0.1358 -0.0596 0.0810 'X-RAY DIFFRACTION' 3 ? refined -19.7929 21.9029 11.9078 0.2108 0.3498 0.2207 0.0103 0.0284 -0.0743 1.9546 2.1461 3.9678 -0.9091 -0.5095 0.8289 0.1166 0.0879 -0.0916 0.0838 -0.3555 0.5203 -0.0759 -0.5729 0.1244 'X-RAY DIFFRACTION' 4 ? refined -12.0123 23.6202 9.4458 0.1915 0.2341 0.1923 0.0209 0.0214 -0.0045 2.9768 3.7720 3.1902 1.6292 -0.6655 0.2714 0.1488 0.1959 0.3758 -0.1633 -0.1415 0.0048 -0.4923 -0.1295 -0.0780 'X-RAY DIFFRACTION' 5 ? refined -12.9849 13.0214 19.4107 0.2799 0.2660 0.1742 -0.0602 0.0552 0.0167 2.5644 5.1394 4.5943 0.2154 -0.9924 0.6392 -0.0038 -0.2460 -0.0303 0.7696 -0.2683 0.2980 0.5409 -0.1343 0.1913 'X-RAY DIFFRACTION' 6 ? refined -8.8892 4.9068 2.3790 0.3395 0.1257 0.2424 0.0229 0.0168 -0.0265 2.7455 4.0675 7.0010 -0.3291 -2.1267 2.3344 0.0796 0.2671 -0.1648 -0.2993 -0.1193 -0.0116 0.5873 0.0605 0.2511 'X-RAY DIFFRACTION' 7 ? refined -28.6642 23.1287 12.2986 0.1890 0.9442 0.5671 0.2630 -0.1142 -0.0972 5.0419 7.4021 4.3821 -0.5203 -2.2957 -1.4537 -0.5779 -1.1957 0.8954 0.6591 0.2273 1.0693 -0.7668 -1.1288 0.1175 'X-RAY DIFFRACTION' 8 ? refined -21.9286 13.8291 3.0913 0.1551 0.3322 0.2524 0.0299 -0.0215 -0.0982 4.6903 6.5771 6.4838 -1.7853 -2.7702 3.1730 -0.0602 0.2217 -0.1032 -0.1444 -0.2882 0.7467 -0.1694 -1.0384 0.2399 'X-RAY DIFFRACTION' 9 ? refined -16.3679 5.4680 -3.3246 0.4796 0.3637 0.3974 -0.0771 -0.1425 -0.0608 7.0294 5.0035 3.4362 4.3526 -0.3163 2.0187 0.1900 0.7141 -0.6782 -0.5206 0.4561 0.1495 0.7947 -0.5899 0.4016 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 2:32)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 33:48)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 49:82)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 83:121)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 122:150)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 151:164)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 53:61)' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 62:71)' 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 72:76)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHENIX phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A LEU 57 ? ? O A HOH 2041 ? ? 1.71 2 1 O A HOH 2051 ? ? O A HOH 2061 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 49 ? ? -115.49 51.70 2 1 ARG B 75 ? ? 80.35 -50.15 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2024 ? 5.87 . 2 1 O ? A HOH 2025 ? 6.04 . 3 1 O ? B HOH 2008 ? 6.40 . 4 1 O ? B HOH 2009 ? 7.49 . 5 1 O ? B HOH 2011 ? 8.24 . 6 1 O ? B HOH 2012 ? 8.78 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B ARG 76 ? CG ? B ARG 28 CG 2 1 Y 1 B ARG 76 ? CD ? B ARG 28 CD 3 1 Y 1 B ARG 76 ? NE ? B ARG 28 NE 4 1 Y 1 B ARG 76 ? CZ ? B ARG 28 CZ 5 1 Y 1 B ARG 76 ? NH1 ? B ARG 28 NH1 6 1 Y 1 B ARG 76 ? NH2 ? B ARG 28 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A GLY -1 ? A GLY 2 3 1 Y 1 A SER 0 ? A SER 3 4 1 Y 1 A ALA 1 ? A ALA 4 5 1 Y 1 A ARG 106 ? A ARG 109 6 1 Y 1 A TRP 107 ? A TRP 110 7 1 Y 1 A LYS 108 ? A LYS 111 8 1 Y 1 A LYS 109 ? A LYS 112 9 1 Y 1 A TRP 110 ? A TRP 113 10 1 Y 1 A GLY 111 ? A GLY 114 11 1 Y 1 A PHE 112 ? A PHE 115 12 1 Y 1 A GLN 113 ? A GLN 116 13 1 Y 1 A PRO 114 ? A PRO 117 14 1 Y 1 A ARG 115 ? A ARG 118 15 1 Y 1 A LEU 116 ? A LEU 119 16 1 Y 1 A LYS 117 ? A LYS 120 17 1 Y 1 A GLU 118 ? A GLU 121 18 1 Y 1 A GLN 119 ? A GLN 122 19 1 Y 1 A GLU 120 ? A GLU 123 20 1 Y 1 A LEU 165 ? A LEU 168 21 1 Y 1 A ALA 166 ? A ALA 169 22 1 Y 1 A GLU 167 ? A GLU 170 23 1 Y 1 A ASN 168 ? A ASN 171 24 1 Y 1 A LEU 169 ? A LEU 172 25 1 Y 1 A TYR 170 ? A TYR 173 26 1 Y 1 A PHE 171 ? A PHE 174 27 1 Y 1 A GLN 172 ? A GLN 175 28 1 Y 1 B GLY 49 ? B GLY 1 29 1 Y 1 B SER 50 ? B SER 2 30 1 Y 1 B ASP 51 ? B ASP 3 31 1 Y 1 B MET 52 ? B MET 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'TETRAETHYLENE GLYCOL' PG4 4 water HOH #