HEADER APOPTOSIS 01-AUG-12 4B4S TITLE CRYSTAL STRUCTURE OF A PRO-SURVIVAL BCL-2:BIM BH3 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: BCL-2-LIKE PROTEIN 10; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 2-167; COMPND 5 SYNONYM: BCL2-L-10, ANTI-APOPTOTIC PROTEIN NRH, APOPTOSIS REGULATOR COMPND 6 BCL-B; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: BCL-2-LIKE PROTEIN 11; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: RESIDUES 51-76; COMPND 13 SYNONYM: BCL2-L-11, BCL2-INTERACTING MEDIATOR OF CELL DEATH; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET31B; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PET31B KEYWDS APOPTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR G.J.P.RAUTUREAU,M.G.HINDS,M.KVANSAKUL REVDAT 1 16-JAN-13 4B4S 0 JRNL AUTH G.J.P.RAUTUREAU,M.YABAL,H.YANG,D.C.S.HUANG,M.KVANSAKUL, JRNL AUTH 2 M.G.HINDS JRNL TITL THE RESTRICTED BINDING REPERTOIRE OF BCL-B LEAVES BIM AS JRNL TITL 2 THE UNIVERSAL BH3-ONLY PROSURVIVAL BCL-2 PROTEIN JRNL TITL 3 ANTAGONIST. JRNL REF CELL DEATH DIS. V. 3 E443 2012 JRNL REFN ISSN 2041-4889 JRNL PMID 23235460 JRNL DOI 10.1038/CDDIS.2012.178 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.614 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.38 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.97 REMARK 3 NUMBER OF REFLECTIONS : 14768 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.1974 REMARK 3 R VALUE (WORKING SET) : 0.1962 REMARK 3 FREE R VALUE : 0.2198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 FREE R VALUE TEST SET COUNT : 747 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.6147 - 3.2451 1.00 2932 150 0.1986 0.2164 REMARK 3 2 3.2451 - 2.5775 1.00 2802 147 0.1822 0.2189 REMARK 3 3 2.5775 - 2.2523 1.00 2792 144 0.1827 0.1931 REMARK 3 4 2.2523 - 2.0466 1.00 2751 152 0.2010 0.2431 REMARK 3 5 2.0466 - 1.9000 1.00 2744 154 0.2417 0.2551 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.47 REMARK 3 K_SOL : 0.400 REMARK 3 B_SOL : 80.000 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.21 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.80 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.4229 REMARK 3 B22 (A**2) : 8.5362 REMARK 3 B33 (A**2) : -6.1133 REMARK 3 B12 (A**2) : 0.0000 REMARK 3 B13 (A**2) : 0.0000 REMARK 3 B23 (A**2) : 0.0000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1404 REMARK 3 ANGLE : 0.877 1903 REMARK 3 CHIRALITY : 0.048 201 REMARK 3 PLANARITY : 0.005 249 REMARK 3 DIHEDRAL : 13.954 517 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 2:32) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4957 16.7314 14.1287 REMARK 3 T TENSOR REMARK 3 T11: 0.1470 T22: 0.2450 REMARK 3 T33: 0.1459 T12: 0.0114 REMARK 3 T13: -0.0392 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 2.9245 L22: 4.3460 REMARK 3 L33: 4.3650 L12: 0.3381 REMARK 3 L13: -1.0543 L23: 0.3260 REMARK 3 S TENSOR REMARK 3 S11: 0.0217 S12: -0.2587 S13: -0.0918 REMARK 3 S21: 0.4581 S22: -0.0848 S23: -0.2441 REMARK 3 S31: 0.1444 S32: 0.3113 S33: 0.0668 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 33:48) REMARK 3 ORIGIN FOR THE GROUP (A): -7.9850 16.0141 2.9681 REMARK 3 T TENSOR REMARK 3 T11: 0.0986 T22: 0.1463 REMARK 3 T33: 0.1520 T12: 0.0108 REMARK 3 T13: -0.0012 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 5.0077 L22: 4.0056 REMARK 3 L33: 5.5624 L12: -2.3795 REMARK 3 L13: 1.4900 L23: -0.9303 REMARK 3 S TENSOR REMARK 3 S11: 0.2555 S12: 0.5360 S13: 0.2342 REMARK 3 S21: -0.3512 S22: -0.3426 S23: 0.0295 REMARK 3 S31: 0.1358 S32: -0.0596 S33: 0.0810 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 49:82) REMARK 3 ORIGIN FOR THE GROUP (A): -19.7929 21.9029 11.9078 REMARK 3 T TENSOR REMARK 3 T11: 0.2108 T22: 0.3498 REMARK 3 T33: 0.2207 T12: 0.0103 REMARK 3 T13: 0.0284 T23: -0.0743 REMARK 3 L TENSOR REMARK 3 L11: 1.9546 L22: 2.1461 REMARK 3 L33: 3.9678 L12: -0.9091 REMARK 3 L13: -0.5095 L23: 0.8289 REMARK 3 S TENSOR REMARK 3 S11: 0.1166 S12: 0.0879 S13: -0.0916 REMARK 3 S21: 0.0838 S22: -0.3555 S23: 0.5203 REMARK 3 S31: -0.0759 S32: -0.5729 S33: 0.1244 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 83:121) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0123 23.6202 9.4458 REMARK 3 T TENSOR REMARK 3 T11: 0.1915 T22: 0.2341 REMARK 3 T33: 0.1923 T12: 0.0209 REMARK 3 T13: 0.0214 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 2.9768 L22: 3.7720 REMARK 3 L33: 3.1902 L12: 1.6292 REMARK 3 L13: -0.6655 L23: 0.2714 REMARK 3 S TENSOR REMARK 3 S11: 0.1488 S12: 0.1959 S13: 0.3758 REMARK 3 S21: -0.1633 S22: -0.1415 S23: 0.0048 REMARK 3 S31: -0.4923 S32: -0.1295 S33: -0.0780 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 122:150) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9849 13.0214 19.4107 REMARK 3 T TENSOR REMARK 3 T11: 0.2799 T22: 0.2660 REMARK 3 T33: 0.1742 T12: -0.0602 REMARK 3 T13: 0.0552 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 2.5644 L22: 5.1394 REMARK 3 L33: 4.5943 L12: 0.2154 REMARK 3 L13: -0.9924 L23: 0.6392 REMARK 3 S TENSOR REMARK 3 S11: -0.0038 S12: -0.2460 S13: -0.0303 REMARK 3 S21: 0.7696 S22: -0.2683 S23: 0.2980 REMARK 3 S31: 0.5409 S32: -0.1343 S33: 0.1913 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 151:164) REMARK 3 ORIGIN FOR THE GROUP (A): -8.8892 4.9068 2.3790 REMARK 3 T TENSOR REMARK 3 T11: 0.3395 T22: 0.1257 REMARK 3 T33: 0.2424 T12: 0.0229 REMARK 3 T13: 0.0168 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 2.7455 L22: 4.0675 REMARK 3 L33: 7.0010 L12: -0.3291 REMARK 3 L13: -2.1267 L23: 2.3344 REMARK 3 S TENSOR REMARK 3 S11: 0.0796 S12: 0.2671 S13: -0.1648 REMARK 3 S21: -0.2993 S22: -0.1193 S23: -0.0116 REMARK 3 S31: 0.5873 S32: 0.0605 S33: 0.2511 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 53:61) REMARK 3 ORIGIN FOR THE GROUP (A): -28.6642 23.1287 12.2986 REMARK 3 T TENSOR REMARK 3 T11: 0.1890 T22: 0.9442 REMARK 3 T33: 0.5671 T12: 0.2630 REMARK 3 T13: -0.1142 T23: -0.0972 REMARK 3 L TENSOR REMARK 3 L11: 5.0419 L22: 7.4021 REMARK 3 L33: 4.3821 L12: -0.5203 REMARK 3 L13: -2.2957 L23: -1.4537 REMARK 3 S TENSOR REMARK 3 S11: -0.5779 S12: -1.1957 S13: 0.8954 REMARK 3 S21: 0.6591 S22: 0.2273 S23: 1.0693 REMARK 3 S31: -0.7668 S32: -1.1288 S33: 0.1175 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 62:71) REMARK 3 ORIGIN FOR THE GROUP (A): -21.9286 13.8291 3.0913 REMARK 3 T TENSOR REMARK 3 T11: 0.1551 T22: 0.3322 REMARK 3 T33: 0.2524 T12: 0.0299 REMARK 3 T13: -0.0215 T23: -0.0982 REMARK 3 L TENSOR REMARK 3 L11: 4.6903 L22: 6.5771 REMARK 3 L33: 6.4838 L12: -1.7853 REMARK 3 L13: -2.7702 L23: 3.1730 REMARK 3 S TENSOR REMARK 3 S11: -0.0602 S12: 0.2217 S13: -0.1032 REMARK 3 S21: -0.1444 S22: -0.2882 S23: 0.7467 REMARK 3 S31: -0.1694 S32: -1.0384 S33: 0.2399 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 72:76) REMARK 3 ORIGIN FOR THE GROUP (A): -16.3679 5.4680 -3.3246 REMARK 3 T TENSOR REMARK 3 T11: 0.4796 T22: 0.3637 REMARK 3 T33: 0.3974 T12: -0.0771 REMARK 3 T13: -0.1425 T23: -0.0608 REMARK 3 L TENSOR REMARK 3 L11: 7.0294 L22: 5.0035 REMARK 3 L33: 3.4362 L12: 4.3526 REMARK 3 L13: -0.3163 L23: 2.0187 REMARK 3 S TENSOR REMARK 3 S11: 0.1900 S12: 0.7141 S13: -0.6782 REMARK 3 S21: -0.5206 S22: 0.4561 S23: 0.1495 REMARK 3 S31: 0.7947 S32: -0.5899 S33: 0.4016 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4B4S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-AUG-12. REMARK 100 THE PDBE ID CODE IS EBI-52451. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.957 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC (QUANTUM 315R) REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14793 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.90 REMARK 200 RESOLUTION RANGE LOW (A) : 19.92 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.2 REMARK 200 R MERGE (I) : 0.08 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.70 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.3 REMARK 200 R MERGE FOR SHELL (I) : 0.88 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.50 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MGCL2, 20 % PEG 400, 20 % REMARK 280 PEG 3350, 0.1 M TRIS PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.18600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.18600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 19.92150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.42250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 19.92150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.42250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.18600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 19.92150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 47.42250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.18600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 19.92150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 47.42250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2024 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2048 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2067 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 ALA A 1 REMARK 465 ARG A 106 REMARK 465 TRP A 107 REMARK 465 LYS A 108 REMARK 465 LYS A 109 REMARK 465 TRP A 110 REMARK 465 GLY A 111 REMARK 465 PHE A 112 REMARK 465 GLN A 113 REMARK 465 PRO A 114 REMARK 465 ARG A 115 REMARK 465 LEU A 116 REMARK 465 LYS A 117 REMARK 465 GLU A 118 REMARK 465 GLN A 119 REMARK 465 GLU A 120 REMARK 465 LEU A 165 REMARK 465 ALA A 166 REMARK 465 GLU A 167 REMARK 465 ASN A 168 REMARK 465 LEU A 169 REMARK 465 TYR A 170 REMARK 465 PHE A 171 REMARK 465 GLN A 172 REMARK 465 GLY B 49 REMARK 465 SER B 50 REMARK 465 ASP B 51 REMARK 465 MET B 52 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 76 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 57 O HOH A 2041 1.71 REMARK 500 O HOH A 2051 O HOH A 2061 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2066 O HOH A 2066 3455 0.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 49 51.70 -115.49 REMARK 500 ARG B 75 -50.15 80.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A1165 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2V6Q RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A BHRF-1 : BIM BH3 COMPLEX REMARK 900 RELATED ID: 2VM6 RELATED DB: PDB REMARK 900 HUMAN BCL-2A1 IN COMPLEX WITH BIM REMARK 900 RELATED ID: 2WH6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ANTI-APOPTOTIC BHRF1 IN COMPLEX REMARK 900 WITH THE BIM BH3 DOMAIN DBREF 4B4S A 1 166 UNP Q9HD36 B2L10_HUMAN 2 167 DBREF 4B4S B 51 76 UNP O43521 B2L11_HUMAN 51 76 SEQADV 4B4S GLY A -2 UNP Q9HD36 EXPRESSION TAG SEQADV 4B4S GLY A -1 UNP Q9HD36 EXPRESSION TAG SEQADV 4B4S SER A 0 UNP Q9HD36 EXPRESSION TAG SEQADV 4B4S GLU A 167 UNP Q9HD36 EXPRESSION TAG SEQADV 4B4S ASN A 168 UNP Q9HD36 EXPRESSION TAG SEQADV 4B4S LEU A 169 UNP Q9HD36 EXPRESSION TAG SEQADV 4B4S TYR A 170 UNP Q9HD36 EXPRESSION TAG SEQADV 4B4S PHE A 171 UNP Q9HD36 EXPRESSION TAG SEQADV 4B4S GLN A 172 UNP Q9HD36 EXPRESSION TAG SEQADV 4B4S SER A 19 UNP Q9HD36 CYS 20 ENGINEERED MUTATION SEQADV 4B4S SER A 127 UNP Q9HD36 CYS 128 ENGINEERED MUTATION SEQADV 4B4S SER A 156 UNP Q9HD36 CYS 157 CONFLICT SEQADV 4B4S GLY B 49 UNP O43521 EXPRESSION TAG SEQADV 4B4S SER B 50 UNP O43521 EXPRESSION TAG SEQRES 1 A 175 GLY GLY SER ALA ASP PRO LEU ARG GLU ARG THR GLU LEU SEQRES 2 A 175 LEU LEU ALA ASP TYR LEU GLY TYR SER ALA ARG GLU PRO SEQRES 3 A 175 GLY THR PRO GLU PRO ALA PRO SER THR PRO GLU ALA ALA SEQRES 4 A 175 VAL LEU ARG SER ALA ALA ALA ARG LEU ARG GLN ILE HIS SEQRES 5 A 175 ARG SER PHE PHE SER ALA TYR LEU GLY TYR PRO GLY ASN SEQRES 6 A 175 ARG PHE GLU LEU VAL ALA LEU MET ALA ASP SER VAL LEU SEQRES 7 A 175 SER ASP SER PRO GLY PRO THR TRP GLY ARG VAL VAL THR SEQRES 8 A 175 LEU VAL THR PHE ALA GLY THR LEU LEU GLU ARG GLY PRO SEQRES 9 A 175 LEU VAL THR ALA ARG TRP LYS LYS TRP GLY PHE GLN PRO SEQRES 10 A 175 ARG LEU LYS GLU GLN GLU GLY ASP VAL ALA ARG ASP SER SEQRES 11 A 175 GLN ARG LEU VAL ALA LEU LEU SER SER ARG LEU MET GLY SEQRES 12 A 175 GLN HIS ARG ALA TRP LEU GLN ALA GLN GLY GLY TRP ASP SEQRES 13 A 175 GLY PHE SER HIS PHE PHE ARG THR PRO PHE PRO LEU ALA SEQRES 14 A 175 GLU ASN LEU TYR PHE GLN SEQRES 1 B 28 GLY SER ASP MET ARG PRO GLU ILE TRP ILE ALA GLN GLU SEQRES 2 B 28 LEU ARG ARG ILE GLY ASP GLU PHE ASN ALA TYR TYR ALA SEQRES 3 B 28 ARG ARG HET PG4 A1165 13 HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 3 PG4 C8 H18 O5 FORMUL 4 HOH *88(H2 O) HELIX 1 1 ASP A 2 ALA A 20 1 19 HELIX 2 2 THR A 32 HIS A 49 1 18 HELIX 3 3 HIS A 49 ALA A 55 1 7 HELIX 4 4 ASN A 62 ASP A 77 1 16 HELIX 5 5 THR A 82 GLU A 98 1 17 HELIX 6 6 GLY A 100 ALA A 105 1 6 HELIX 7 7 GLY A 121 GLN A 141 1 21 HELIX 8 8 HIS A 142 GLN A 149 1 8 HELIX 9 9 GLY A 150 ARG A 160 1 11 HELIX 10 10 ARG B 53 ALA B 74 1 22 CISPEP 1 SER A 78 PRO A 79 0 -2.01 SITE 1 AC1 6 ALA A 36 SER A 40 ALA A 41 PHE A 159 SITE 2 AC1 6 ARG A 160 TYR B 73 CRYST1 39.843 94.845 96.372 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025099 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010544 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010376 0.00000