data_4BK0 # _entry.id 4BK0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4BK0 PDBE EBI-56592 WWPDB D_1290056592 # _pdbx_database_related.db_name EMDB _pdbx_database_related.db_id EMD-2367 _pdbx_database_related.content_type 'other EM volume' _pdbx_database_related.details 'STRUCTURAL MIMICRY IN TRANSCRIPTION REGULATION OF HUMAN RNA POLYMERASE II BY THE DNA HELICASE RECQL5' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4BK0 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-04-21 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kassube, S.A.' 1 'Jinek, M.' 2 'Fang, J.' 3 'Tsutakawa, S.' 4 'Nogales, E.' 5 # _citation.id primary _citation.title 'Structural Mimicry in Transcription Regulation of Human RNA Polymerase II by the DNA Helicase Recql5' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 20 _citation.page_first 892 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23748380 _citation.pdbx_database_id_DOI 10.1038/NSMB.2596 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kassube, S.A.' 1 ? primary 'Jinek, M.' 2 ? primary 'Fang, J.' 3 ? primary 'Tsutakawa, S.' 4 ? primary 'Nogales, E.' 5 ? # _cell.entry_id 4BK0 _cell.length_a 50.670 _cell.length_b 61.210 _cell.length_c 81.650 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4BK0 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ATP-DEPENDENT DNA HELICASE Q5' 12520.251 2 3.6.4.12 ? 'KIX DOMAIN, RESIDUES 515-620' ? 2 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 2 ? ? ? ? 3 water nat water 18.015 94 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DNA HELICASE, RECQ-LIKE TYPE 5, RECQ5, RECQ PROTEIN-LIKE 5, RECQL5' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSRKGKDPKIEEFVPPDENCPLKEASSRRIPRLTVKAREHCLRLLEEALSSNRQSTRTADEADLRAKAVELEHETFR NAKVANLYKASVLKKVADIHRASKDGQPYDM ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSRKGKDPKIEEFVPPDENCPLKEASSRRIPRLTVKAREHCLRLLEEALSSNRQSTRTADEADLRAKAVELEHETFR NAKVANLYKASVLKKVADIHRASKDGQPYDM ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 ARG n 1 7 LYS n 1 8 GLY n 1 9 LYS n 1 10 ASP n 1 11 PRO n 1 12 LYS n 1 13 ILE n 1 14 GLU n 1 15 GLU n 1 16 PHE n 1 17 VAL n 1 18 PRO n 1 19 PRO n 1 20 ASP n 1 21 GLU n 1 22 ASN n 1 23 CYS n 1 24 PRO n 1 25 LEU n 1 26 LYS n 1 27 GLU n 1 28 ALA n 1 29 SER n 1 30 SER n 1 31 ARG n 1 32 ARG n 1 33 ILE n 1 34 PRO n 1 35 ARG n 1 36 LEU n 1 37 THR n 1 38 VAL n 1 39 LYS n 1 40 ALA n 1 41 ARG n 1 42 GLU n 1 43 HIS n 1 44 CYS n 1 45 LEU n 1 46 ARG n 1 47 LEU n 1 48 LEU n 1 49 GLU n 1 50 GLU n 1 51 ALA n 1 52 LEU n 1 53 SER n 1 54 SER n 1 55 ASN n 1 56 ARG n 1 57 GLN n 1 58 SER n 1 59 THR n 1 60 ARG n 1 61 THR n 1 62 ALA n 1 63 ASP n 1 64 GLU n 1 65 ALA n 1 66 ASP n 1 67 LEU n 1 68 ARG n 1 69 ALA n 1 70 LYS n 1 71 ALA n 1 72 VAL n 1 73 GLU n 1 74 LEU n 1 75 GLU n 1 76 HIS n 1 77 GLU n 1 78 THR n 1 79 PHE n 1 80 ARG n 1 81 ASN n 1 82 ALA n 1 83 LYS n 1 84 VAL n 1 85 ALA n 1 86 ASN n 1 87 LEU n 1 88 TYR n 1 89 LYS n 1 90 ALA n 1 91 SER n 1 92 VAL n 1 93 LEU n 1 94 LYS n 1 95 LYS n 1 96 VAL n 1 97 ALA n 1 98 ASP n 1 99 ILE n 1 100 HIS n 1 101 ARG n 1 102 ALA n 1 103 SER n 1 104 LYS n 1 105 ASP n 1 106 GLY n 1 107 GLN n 1 108 PRO n 1 109 TYR n 1 110 ASP n 1 111 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant RIL _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PGEX6P1 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RECQ5_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession O94762 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4BK0 A 6 ? 111 ? O94762 515 ? 620 ? 515 620 2 1 4BK0 B 6 ? 111 ? O94762 515 ? 620 ? 515 620 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4BK0 GLY A 1 ? UNP O94762 ? ? 'expression tag' 510 1 1 4BK0 PRO A 2 ? UNP O94762 ? ? 'expression tag' 511 2 1 4BK0 LEU A 3 ? UNP O94762 ? ? 'expression tag' 512 3 1 4BK0 GLY A 4 ? UNP O94762 ? ? 'expression tag' 513 4 1 4BK0 SER A 5 ? UNP O94762 ? ? 'expression tag' 514 5 2 4BK0 GLY B 1 ? UNP O94762 ? ? 'expression tag' 510 6 2 4BK0 PRO B 2 ? UNP O94762 ? ? 'expression tag' 511 7 2 4BK0 LEU B 3 ? UNP O94762 ? ? 'expression tag' 512 8 2 4BK0 GLY B 4 ? UNP O94762 ? ? 'expression tag' 513 9 2 4BK0 SER B 5 ? UNP O94762 ? ? 'expression tag' 514 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4BK0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.53 _exptl_crystal.density_percent_sol 51.5 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2 M NACL, 0.1 M SODIUM/POTASSIUM PHOSPHATE PH 6.2, 50% PEG 200' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2010-10-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.11589 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength 1.11589 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4BK0 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 49.00 _reflns.d_resolution_high 1.90 _reflns.number_obs 20613 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.04 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.80 _reflns.B_iso_Wilson_estimate 31.70 _reflns.pdbx_redundancy 7.0 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.95 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.52 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.60 _reflns_shell.pdbx_redundancy 7.1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4BK0 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 20613 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.976 _refine.ls_d_res_high 1.900 _refine.ls_percent_reflns_obs 99.90 _refine.ls_R_factor_obs 0.2030 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2014 _refine.ls_R_factor_R_free 0.2336 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1054 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 48.44 _refine.aniso_B[1][1] -7.9330 _refine.aniso_B[2][2] 11.9549 _refine.aniso_B[3][3] -4.0219 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.371 _refine.solvent_model_param_bsol 48.041 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.86 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.21 _refine.pdbx_overall_phase_error 20.72 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1504 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 94 _refine_hist.number_atoms_total 1612 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 48.976 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 1542 'X-RAY DIFFRACTION' ? f_angle_d 1.043 ? ? 2071 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.781 ? ? 616 'X-RAY DIFFRACTION' ? f_chiral_restr 0.052 ? ? 233 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 274 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.9000 1.9865 2394 0.2333 100.00 0.2273 . . 126 . . 'X-RAY DIFFRACTION' . 1.9865 2.0912 2396 0.1989 100.00 0.2361 . . 127 . . 'X-RAY DIFFRACTION' . 2.0912 2.2222 2406 0.1927 100.00 0.1957 . . 126 . . 'X-RAY DIFFRACTION' . 2.2222 2.3938 2404 0.1847 100.00 0.2655 . . 148 . . 'X-RAY DIFFRACTION' . 2.3938 2.6347 2431 0.1943 100.00 0.2313 . . 138 . . 'X-RAY DIFFRACTION' . 2.6347 3.0159 2441 0.1972 100.00 0.2496 . . 140 . . 'X-RAY DIFFRACTION' . 3.0159 3.7995 2516 0.2112 100.00 0.2431 . . 102 . . 'X-RAY DIFFRACTION' . 3.7995 48.9922 2571 0.2007 100.00 0.2221 . . 147 . . # _struct.entry_id 4BK0 _struct.title 'Crystal structure of the KIX domain of human RECQL5 (domain-swapped dimer)' _struct.pdbx_descriptor 'ATP-DEPENDENT DNA HELICASE Q5 (E.C.3.6.4.12)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4BK0 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'TRANSCRIPTION, DNA HELICASE, TRANSCRIPTIONAL REPRESSION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 37 ? ASN A 81 ? THR A 546 ASN A 590 1 ? 45 HELX_P HELX_P2 2 VAL A 84 ? ASP A 105 ? VAL A 593 ASP A 614 1 ? 22 HELX_P HELX_P3 3 THR B 37 ? ARG B 60 ? THR B 546 ARG B 569 1 ? 24 HELX_P HELX_P4 4 ASP B 66 ? ASN B 81 ? ASP B 575 ASN B 590 1 ? 16 HELX_P HELX_P5 5 VAL B 84 ? ASP B 105 ? VAL B 593 ASP B 614 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE PEG B 1621' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE PEG B 1622' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 PRO A 24 ? PRO A 533 . ? 1_555 ? 2 AC1 7 HOH E . ? HOH A 2012 . ? 1_555 ? 3 AC1 7 ASP B 66 ? ASP B 575 . ? 1_555 ? 4 AC1 7 VAL B 84 ? VAL B 593 . ? 4_565 ? 5 AC1 7 HOH F . ? HOH B 2019 . ? 1_555 ? 6 AC1 7 HOH F . ? HOH B 2038 . ? 1_555 ? 7 AC1 7 HOH F . ? HOH B 2039 . ? 1_555 ? 8 AC2 4 THR A 37 ? THR A 546 . ? 2_575 ? 9 AC2 4 THR B 37 ? THR B 546 . ? 1_555 ? 10 AC2 4 ALA B 40 ? ALA B 549 . ? 1_555 ? 11 AC2 4 HIS B 43 ? HIS B 552 . ? 1_555 ? # _database_PDB_matrix.entry_id 4BK0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4BK0 _atom_sites.fract_transf_matrix[1][1] 0.019736 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016337 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012247 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 510 ? ? ? A . n A 1 2 PRO 2 511 ? ? ? A . n A 1 3 LEU 3 512 ? ? ? A . n A 1 4 GLY 4 513 ? ? ? A . n A 1 5 SER 5 514 ? ? ? A . n A 1 6 ARG 6 515 ? ? ? A . n A 1 7 LYS 7 516 ? ? ? A . n A 1 8 GLY 8 517 ? ? ? A . n A 1 9 LYS 9 518 ? ? ? A . n A 1 10 ASP 10 519 ? ? ? A . n A 1 11 PRO 11 520 ? ? ? A . n A 1 12 LYS 12 521 ? ? ? A . n A 1 13 ILE 13 522 ? ? ? A . n A 1 14 GLU 14 523 523 GLU GLU A . n A 1 15 GLU 15 524 524 GLU GLU A . n A 1 16 PHE 16 525 525 PHE PHE A . n A 1 17 VAL 17 526 526 VAL VAL A . n A 1 18 PRO 18 527 527 PRO PRO A . n A 1 19 PRO 19 528 528 PRO PRO A . n A 1 20 ASP 20 529 529 ASP ASP A . n A 1 21 GLU 21 530 530 GLU GLU A . n A 1 22 ASN 22 531 531 ASN ASN A . n A 1 23 CYS 23 532 532 CYS CYS A . n A 1 24 PRO 24 533 533 PRO PRO A . n A 1 25 LEU 25 534 534 LEU LEU A . n A 1 26 LYS 26 535 535 LYS LYS A . n A 1 27 GLU 27 536 536 GLU GLU A . n A 1 28 ALA 28 537 537 ALA ALA A . n A 1 29 SER 29 538 538 SER SER A . n A 1 30 SER 30 539 539 SER SER A . n A 1 31 ARG 31 540 540 ARG ARG A . n A 1 32 ARG 32 541 541 ARG ARG A . n A 1 33 ILE 33 542 542 ILE ILE A . n A 1 34 PRO 34 543 543 PRO PRO A . n A 1 35 ARG 35 544 544 ARG ARG A . n A 1 36 LEU 36 545 545 LEU LEU A . n A 1 37 THR 37 546 546 THR THR A . n A 1 38 VAL 38 547 547 VAL VAL A . n A 1 39 LYS 39 548 548 LYS LYS A . n A 1 40 ALA 40 549 549 ALA ALA A . n A 1 41 ARG 41 550 550 ARG ARG A . n A 1 42 GLU 42 551 551 GLU GLU A . n A 1 43 HIS 43 552 552 HIS HIS A . n A 1 44 CYS 44 553 553 CYS CYS A . n A 1 45 LEU 45 554 554 LEU LEU A . n A 1 46 ARG 46 555 555 ARG ARG A . n A 1 47 LEU 47 556 556 LEU LEU A . n A 1 48 LEU 48 557 557 LEU LEU A . n A 1 49 GLU 49 558 558 GLU GLU A . n A 1 50 GLU 50 559 559 GLU GLU A . n A 1 51 ALA 51 560 560 ALA ALA A . n A 1 52 LEU 52 561 561 LEU LEU A . n A 1 53 SER 53 562 562 SER SER A . n A 1 54 SER 54 563 563 SER SER A . n A 1 55 ASN 55 564 564 ASN ASN A . n A 1 56 ARG 56 565 565 ARG ARG A . n A 1 57 GLN 57 566 566 GLN GLN A . n A 1 58 SER 58 567 567 SER SER A . n A 1 59 THR 59 568 568 THR THR A . n A 1 60 ARG 60 569 569 ARG ARG A . n A 1 61 THR 61 570 570 THR THR A . n A 1 62 ALA 62 571 571 ALA ALA A . n A 1 63 ASP 63 572 572 ASP ASP A . n A 1 64 GLU 64 573 573 GLU GLU A . n A 1 65 ALA 65 574 574 ALA ALA A . n A 1 66 ASP 66 575 575 ASP ASP A . n A 1 67 LEU 67 576 576 LEU LEU A . n A 1 68 ARG 68 577 577 ARG ARG A . n A 1 69 ALA 69 578 578 ALA ALA A . n A 1 70 LYS 70 579 579 LYS LYS A . n A 1 71 ALA 71 580 580 ALA ALA A . n A 1 72 VAL 72 581 581 VAL VAL A . n A 1 73 GLU 73 582 582 GLU GLU A . n A 1 74 LEU 74 583 583 LEU LEU A . n A 1 75 GLU 75 584 584 GLU GLU A . n A 1 76 HIS 76 585 585 HIS HIS A . n A 1 77 GLU 77 586 586 GLU GLU A . n A 1 78 THR 78 587 587 THR THR A . n A 1 79 PHE 79 588 588 PHE PHE A . n A 1 80 ARG 80 589 589 ARG ARG A . n A 1 81 ASN 81 590 590 ASN ASN A . n A 1 82 ALA 82 591 591 ALA ALA A . n A 1 83 LYS 83 592 592 LYS LYS A . n A 1 84 VAL 84 593 593 VAL VAL A . n A 1 85 ALA 85 594 594 ALA ALA A . n A 1 86 ASN 86 595 595 ASN ASN A . n A 1 87 LEU 87 596 596 LEU LEU A . n A 1 88 TYR 88 597 597 TYR TYR A . n A 1 89 LYS 89 598 598 LYS LYS A . n A 1 90 ALA 90 599 599 ALA ALA A . n A 1 91 SER 91 600 600 SER SER A . n A 1 92 VAL 92 601 601 VAL VAL A . n A 1 93 LEU 93 602 602 LEU LEU A . n A 1 94 LYS 94 603 603 LYS LYS A . n A 1 95 LYS 95 604 604 LYS LYS A . n A 1 96 VAL 96 605 605 VAL VAL A . n A 1 97 ALA 97 606 606 ALA ALA A . n A 1 98 ASP 98 607 607 ASP ASP A . n A 1 99 ILE 99 608 608 ILE ILE A . n A 1 100 HIS 100 609 609 HIS HIS A . n A 1 101 ARG 101 610 610 ARG ARG A . n A 1 102 ALA 102 611 611 ALA ALA A . n A 1 103 SER 103 612 612 SER SER A . n A 1 104 LYS 104 613 613 LYS LYS A . n A 1 105 ASP 105 614 614 ASP ASP A . n A 1 106 GLY 106 615 ? ? ? A . n A 1 107 GLN 107 616 ? ? ? A . n A 1 108 PRO 108 617 ? ? ? A . n A 1 109 TYR 109 618 ? ? ? A . n A 1 110 ASP 110 619 ? ? ? A . n A 1 111 MET 111 620 ? ? ? A . n B 1 1 GLY 1 510 ? ? ? B . n B 1 2 PRO 2 511 ? ? ? B . n B 1 3 LEU 3 512 ? ? ? B . n B 1 4 GLY 4 513 ? ? ? B . n B 1 5 SER 5 514 ? ? ? B . n B 1 6 ARG 6 515 ? ? ? B . n B 1 7 LYS 7 516 ? ? ? B . n B 1 8 GLY 8 517 ? ? ? B . n B 1 9 LYS 9 518 ? ? ? B . n B 1 10 ASP 10 519 ? ? ? B . n B 1 11 PRO 11 520 ? ? ? B . n B 1 12 LYS 12 521 ? ? ? B . n B 1 13 ILE 13 522 ? ? ? B . n B 1 14 GLU 14 523 ? ? ? B . n B 1 15 GLU 15 524 524 GLU GLU B . n B 1 16 PHE 16 525 525 PHE PHE B . n B 1 17 VAL 17 526 526 VAL VAL B . n B 1 18 PRO 18 527 527 PRO PRO B . n B 1 19 PRO 19 528 528 PRO PRO B . n B 1 20 ASP 20 529 529 ASP ASP B . n B 1 21 GLU 21 530 530 GLU GLU B . n B 1 22 ASN 22 531 531 ASN ASN B . n B 1 23 CYS 23 532 532 CYS CYS B . n B 1 24 PRO 24 533 533 PRO PRO B . n B 1 25 LEU 25 534 534 LEU LEU B . n B 1 26 LYS 26 535 535 LYS LYS B . n B 1 27 GLU 27 536 536 GLU GLU B . n B 1 28 ALA 28 537 537 ALA ALA B . n B 1 29 SER 29 538 538 SER SER B . n B 1 30 SER 30 539 539 SER SER B . n B 1 31 ARG 31 540 540 ARG ARG B . n B 1 32 ARG 32 541 541 ARG ARG B . n B 1 33 ILE 33 542 542 ILE ILE B . n B 1 34 PRO 34 543 543 PRO PRO B . n B 1 35 ARG 35 544 544 ARG ARG B . n B 1 36 LEU 36 545 545 LEU LEU B . n B 1 37 THR 37 546 546 THR THR B . n B 1 38 VAL 38 547 547 VAL VAL B . n B 1 39 LYS 39 548 548 LYS LYS B . n B 1 40 ALA 40 549 549 ALA ALA B . n B 1 41 ARG 41 550 550 ARG ARG B . n B 1 42 GLU 42 551 551 GLU GLU B . n B 1 43 HIS 43 552 552 HIS HIS B . n B 1 44 CYS 44 553 553 CYS CYS B . n B 1 45 LEU 45 554 554 LEU LEU B . n B 1 46 ARG 46 555 555 ARG ARG B . n B 1 47 LEU 47 556 556 LEU LEU B . n B 1 48 LEU 48 557 557 LEU LEU B . n B 1 49 GLU 49 558 558 GLU GLU B . n B 1 50 GLU 50 559 559 GLU GLU B . n B 1 51 ALA 51 560 560 ALA ALA B . n B 1 52 LEU 52 561 561 LEU LEU B . n B 1 53 SER 53 562 562 SER SER B . n B 1 54 SER 54 563 563 SER SER B . n B 1 55 ASN 55 564 564 ASN ASN B . n B 1 56 ARG 56 565 565 ARG ARG B . n B 1 57 GLN 57 566 566 GLN GLN B . n B 1 58 SER 58 567 567 SER SER B . n B 1 59 THR 59 568 568 THR THR B . n B 1 60 ARG 60 569 569 ARG ARG B . n B 1 61 THR 61 570 570 THR THR B . n B 1 62 ALA 62 571 571 ALA ALA B . n B 1 63 ASP 63 572 572 ASP ASP B . n B 1 64 GLU 64 573 573 GLU GLU B . n B 1 65 ALA 65 574 574 ALA ALA B . n B 1 66 ASP 66 575 575 ASP ASP B . n B 1 67 LEU 67 576 576 LEU LEU B . n B 1 68 ARG 68 577 577 ARG ARG B . n B 1 69 ALA 69 578 578 ALA ALA B . n B 1 70 LYS 70 579 579 LYS LYS B . n B 1 71 ALA 71 580 580 ALA ALA B . n B 1 72 VAL 72 581 581 VAL VAL B . n B 1 73 GLU 73 582 582 GLU GLU B . n B 1 74 LEU 74 583 583 LEU LEU B . n B 1 75 GLU 75 584 584 GLU GLU B . n B 1 76 HIS 76 585 585 HIS HIS B . n B 1 77 GLU 77 586 586 GLU GLU B . n B 1 78 THR 78 587 587 THR THR B . n B 1 79 PHE 79 588 588 PHE PHE B . n B 1 80 ARG 80 589 589 ARG ARG B . n B 1 81 ASN 81 590 590 ASN ASN B . n B 1 82 ALA 82 591 591 ALA ALA B . n B 1 83 LYS 83 592 592 LYS LYS B . n B 1 84 VAL 84 593 593 VAL VAL B . n B 1 85 ALA 85 594 594 ALA ALA B . n B 1 86 ASN 86 595 595 ASN ASN B . n B 1 87 LEU 87 596 596 LEU LEU B . n B 1 88 TYR 88 597 597 TYR TYR B . n B 1 89 LYS 89 598 598 LYS LYS B . n B 1 90 ALA 90 599 599 ALA ALA B . n B 1 91 SER 91 600 600 SER SER B . n B 1 92 VAL 92 601 601 VAL VAL B . n B 1 93 LEU 93 602 602 LEU LEU B . n B 1 94 LYS 94 603 603 LYS LYS B . n B 1 95 LYS 95 604 604 LYS LYS B . n B 1 96 VAL 96 605 605 VAL VAL B . n B 1 97 ALA 97 606 606 ALA ALA B . n B 1 98 ASP 98 607 607 ASP ASP B . n B 1 99 ILE 99 608 608 ILE ILE B . n B 1 100 HIS 100 609 609 HIS HIS B . n B 1 101 ARG 101 610 610 ARG ARG B . n B 1 102 ALA 102 611 611 ALA ALA B . n B 1 103 SER 103 612 612 SER SER B . n B 1 104 LYS 104 613 613 LYS LYS B . n B 1 105 ASP 105 614 614 ASP ASP B . n B 1 106 GLY 106 615 615 GLY GLY B . n B 1 107 GLN 107 616 616 GLN GLN B . n B 1 108 PRO 108 617 617 PRO PRO B . n B 1 109 TYR 109 618 618 TYR TYR B . n B 1 110 ASP 110 619 619 ASP ASP B . n B 1 111 MET 111 620 620 MET MET B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG 1 1621 1621 PEG PEG B . D 2 PEG 1 1622 1622 PEG PEG B . E 3 HOH 1 2001 2001 HOH HOH A . E 3 HOH 2 2002 2002 HOH HOH A . E 3 HOH 3 2003 2003 HOH HOH A . E 3 HOH 4 2004 2004 HOH HOH A . E 3 HOH 5 2005 2005 HOH HOH A . E 3 HOH 6 2006 2006 HOH HOH A . E 3 HOH 7 2007 2007 HOH HOH A . E 3 HOH 8 2008 2008 HOH HOH A . E 3 HOH 9 2009 2009 HOH HOH A . E 3 HOH 10 2010 2010 HOH HOH A . E 3 HOH 11 2011 2011 HOH HOH A . E 3 HOH 12 2012 2012 HOH HOH A . E 3 HOH 13 2013 2013 HOH HOH A . E 3 HOH 14 2014 2014 HOH HOH A . E 3 HOH 15 2015 2015 HOH HOH A . E 3 HOH 16 2016 2016 HOH HOH A . E 3 HOH 17 2017 2017 HOH HOH A . E 3 HOH 18 2018 2018 HOH HOH A . E 3 HOH 19 2019 2019 HOH HOH A . E 3 HOH 20 2020 2020 HOH HOH A . E 3 HOH 21 2021 2021 HOH HOH A . E 3 HOH 22 2022 2022 HOH HOH A . E 3 HOH 23 2023 2023 HOH HOH A . E 3 HOH 24 2024 2024 HOH HOH A . E 3 HOH 25 2025 2025 HOH HOH A . E 3 HOH 26 2026 2026 HOH HOH A . E 3 HOH 27 2027 2027 HOH HOH A . E 3 HOH 28 2028 2028 HOH HOH A . E 3 HOH 29 2029 2029 HOH HOH A . E 3 HOH 30 2030 2030 HOH HOH A . E 3 HOH 31 2031 2031 HOH HOH A . E 3 HOH 32 2032 2032 HOH HOH A . E 3 HOH 33 2033 2033 HOH HOH A . E 3 HOH 34 2034 2034 HOH HOH A . E 3 HOH 35 2035 2035 HOH HOH A . E 3 HOH 36 2036 2036 HOH HOH A . E 3 HOH 37 2037 2037 HOH HOH A . E 3 HOH 38 2038 2038 HOH HOH A . E 3 HOH 39 2039 2039 HOH HOH A . E 3 HOH 40 2040 2040 HOH HOH A . E 3 HOH 41 2041 2041 HOH HOH A . E 3 HOH 42 2042 2042 HOH HOH A . E 3 HOH 43 2043 2043 HOH HOH A . E 3 HOH 44 2044 2044 HOH HOH A . E 3 HOH 45 2045 2045 HOH HOH A . E 3 HOH 46 2046 2046 HOH HOH A . E 3 HOH 47 2047 2047 HOH HOH A . E 3 HOH 48 2048 2048 HOH HOH A . E 3 HOH 49 2049 2049 HOH HOH A . E 3 HOH 50 2050 2050 HOH HOH A . E 3 HOH 51 2051 2051 HOH HOH A . E 3 HOH 52 2052 2052 HOH HOH A . E 3 HOH 53 2053 2053 HOH HOH A . E 3 HOH 54 2054 2054 HOH HOH A . F 3 HOH 1 2001 2001 HOH HOH B . F 3 HOH 2 2002 2002 HOH HOH B . F 3 HOH 3 2003 2003 HOH HOH B . F 3 HOH 4 2004 2004 HOH HOH B . F 3 HOH 5 2005 2005 HOH HOH B . F 3 HOH 6 2006 2006 HOH HOH B . F 3 HOH 7 2007 2007 HOH HOH B . F 3 HOH 8 2008 2008 HOH HOH B . F 3 HOH 9 2009 2009 HOH HOH B . F 3 HOH 10 2010 2010 HOH HOH B . F 3 HOH 11 2011 2011 HOH HOH B . F 3 HOH 12 2012 2012 HOH HOH B . F 3 HOH 13 2013 2013 HOH HOH B . F 3 HOH 14 2014 2014 HOH HOH B . F 3 HOH 15 2015 2015 HOH HOH B . F 3 HOH 16 2016 2016 HOH HOH B . F 3 HOH 17 2017 2017 HOH HOH B . F 3 HOH 18 2018 2018 HOH HOH B . F 3 HOH 19 2019 2019 HOH HOH B . F 3 HOH 20 2020 2020 HOH HOH B . F 3 HOH 21 2021 2021 HOH HOH B . F 3 HOH 22 2022 2022 HOH HOH B . F 3 HOH 23 2023 2023 HOH HOH B . F 3 HOH 24 2024 2024 HOH HOH B . F 3 HOH 25 2025 2025 HOH HOH B . F 3 HOH 26 2026 2026 HOH HOH B . F 3 HOH 27 2027 2027 HOH HOH B . F 3 HOH 28 2028 2028 HOH HOH B . F 3 HOH 29 2029 2029 HOH HOH B . F 3 HOH 30 2030 2030 HOH HOH B . F 3 HOH 31 2031 2031 HOH HOH B . F 3 HOH 32 2032 2032 HOH HOH B . F 3 HOH 33 2033 2033 HOH HOH B . F 3 HOH 34 2034 2034 HOH HOH B . F 3 HOH 35 2035 2035 HOH HOH B . F 3 HOH 36 2036 2036 HOH HOH B . F 3 HOH 37 2037 2037 HOH HOH B . F 3 HOH 38 2038 2038 HOH HOH B . F 3 HOH 39 2039 2039 HOH HOH B . F 3 HOH 40 2040 2040 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5640 ? 1 MORE -28.0 ? 1 'SSA (A^2)' 12070 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-06-12 2 'Structure model' 1 1 2013-06-19 3 'Structure model' 1 2 2013-07-17 4 'Structure model' 1 3 2019-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_related 2 4 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_database_related.content_type' 2 4 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -1.9873 53.1082 -5.9587 0.2291 0.2779 0.2590 -0.0169 0.0193 0.0295 7.0543 1.8676 4.2246 0.6377 0.6480 1.6005 -0.0565 0.6836 0.6063 -0.2572 0.0607 0.1504 -0.5434 0.1127 0.0002 'X-RAY DIFFRACTION' 2 ? refined 14.8494 51.3527 22.4886 0.4674 0.4707 0.3434 0.0311 -0.0919 0.0066 5.3304 -1.2342 6.8213 -0.1879 7.3337 0.0814 0.1008 -0.5008 -0.4260 0.3820 0.1117 -0.0804 0.1268 -0.3086 -0.2247 'X-RAY DIFFRACTION' 3 ? refined 39.7137 52.1559 34.2388 0.6804 0.3970 0.4396 0.4792 0.1895 -0.0049 5.6239 6.6086 4.6144 0.0492 1.0474 -0.2929 0.2191 0.9017 -0.6689 -2.0851 -0.3090 -1.4458 0.8592 1.5052 0.0838 'X-RAY DIFFRACTION' 4 ? refined 28.6513 55.8024 40.7080 0.3379 0.1690 0.2662 0.0266 -0.0418 0.0252 7.1122 6.9755 4.6445 -0.8792 -1.6313 -1.5378 -0.1719 -0.0136 -0.4935 -0.1803 0.0420 -0.0269 0.8374 -0.0403 -0.0520 'X-RAY DIFFRACTION' 5 ? refined 21.6256 49.8703 13.5796 0.6141 0.7337 0.6585 0.1323 -0.3164 -0.2188 0.0614 8.2040 6.6582 0.7313 -0.6581 -7.3984 -1.4833 0.2202 -0.0001 2.8792 0.6152 -1.6704 -1.8502 2.1479 1.2736 'X-RAY DIFFRACTION' 6 ? refined 2.3070 44.9574 9.6607 0.2572 0.2715 0.2794 0.0353 0.0019 0.0804 5.1335 3.3580 5.4025 1.1428 1.7886 1.2805 0.2349 -0.6349 -0.6970 0.5668 0.1137 -0.1531 0.5356 0.0103 -0.3061 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 523:546)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 547:589)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 590:614)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 524:568)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 569:575)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 576:620)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 autoSHARP phasing . ? 4 # _pdbx_entry_details.entry_id 4BK0 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;GLPGS SEQUENCE AT N TERMINUS IS DERIVED FROM THE EXPRESSION VECTOR ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2004 ? ? O A HOH 2006 ? ? 1.88 2 1 O A PHE 525 ? ? O A HOH 2002 ? ? 1.95 3 1 O B HOH 2024 ? ? O B HOH 2025 ? ? 2.02 4 1 OE2 A GLU 559 ? ? O A HOH 2035 ? ? 2.14 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLU 524 ? CG ? B GLU 15 CG 2 1 Y 1 B GLU 524 ? CD ? B GLU 15 CD 3 1 Y 1 B GLU 524 ? OE1 ? B GLU 15 OE1 4 1 Y 1 B GLU 524 ? OE2 ? B GLU 15 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 510 ? A GLY 1 2 1 Y 1 A PRO 511 ? A PRO 2 3 1 Y 1 A LEU 512 ? A LEU 3 4 1 Y 1 A GLY 513 ? A GLY 4 5 1 Y 1 A SER 514 ? A SER 5 6 1 Y 1 A ARG 515 ? A ARG 6 7 1 Y 1 A LYS 516 ? A LYS 7 8 1 Y 1 A GLY 517 ? A GLY 8 9 1 Y 1 A LYS 518 ? A LYS 9 10 1 Y 1 A ASP 519 ? A ASP 10 11 1 Y 1 A PRO 520 ? A PRO 11 12 1 Y 1 A LYS 521 ? A LYS 12 13 1 Y 1 A ILE 522 ? A ILE 13 14 1 Y 1 A GLY 615 ? A GLY 106 15 1 Y 1 A GLN 616 ? A GLN 107 16 1 Y 1 A PRO 617 ? A PRO 108 17 1 Y 1 A TYR 618 ? A TYR 109 18 1 Y 1 A ASP 619 ? A ASP 110 19 1 Y 1 A MET 620 ? A MET 111 20 1 Y 1 B GLY 510 ? B GLY 1 21 1 Y 1 B PRO 511 ? B PRO 2 22 1 Y 1 B LEU 512 ? B LEU 3 23 1 Y 1 B GLY 513 ? B GLY 4 24 1 Y 1 B SER 514 ? B SER 5 25 1 Y 1 B ARG 515 ? B ARG 6 26 1 Y 1 B LYS 516 ? B LYS 7 27 1 Y 1 B GLY 517 ? B GLY 8 28 1 Y 1 B LYS 518 ? B LYS 9 29 1 Y 1 B ASP 519 ? B ASP 10 30 1 Y 1 B PRO 520 ? B PRO 11 31 1 Y 1 B LYS 521 ? B LYS 12 32 1 Y 1 B ILE 522 ? B ILE 13 33 1 Y 1 B GLU 523 ? B GLU 14 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'DI(HYDROXYETHYL)ETHER' PEG 3 water HOH #