HEADER TRANSFERASE 27-MAR-14 4CVH TITLE CRYSTAL STRUCTURE OF HUMAN ISOPRENOID SYNTHASE DOMAIN-CONTAINING TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOPRENOID SYNTHASE DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 43-451; COMPND 5 SYNONYM: ISPD, 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE COMPND 6 CYTIDYLYLTRANSFERASE-LIKE PROTEIN; COMPND 7 EC: 2.7.7.-; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFB-LIC-BSE KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KOPEC,D.S.FROESE,T.KROJER,J.NEWMAN,W.KIYANI,S.GOUBIN,C.STRAIN- AUTHOR 2 DAMERELL,M.VOLLMAR,F.VON DELFT,N.BURGESS-BROWN,C.ARROWSMITH, AUTHOR 3 A.EDWARDS,C.BOUNTRA,D.J.LEFEBER,W.W.YUE REVDAT 3 24-JAN-18 4CVH 1 JRNL REVDAT 2 13-JAN-16 4CVH 1 JRNL REVDAT 1 04-FEB-15 4CVH 0 JRNL AUTH M.RIEMERSMA,D.S.FROESE,W.VAN TOL,U.F.ENGELKE,J.KOPEC, JRNL AUTH 2 M.VAN SCHERPENZEEL,A.ASHIKOV,T.KROJER,F.VON DELFT,M.TESSARI, JRNL AUTH 3 A.BUCZKOWSKA,E.SWIEZEWSKA,L.T.JAE,T.R.BRUMMELKAMP,H.MANYA, JRNL AUTH 4 T.ENDO,H.VAN BOKHOVEN,W.W.YUE,D.J.LEFEBER JRNL TITL HUMAN ISPD IS A CYTIDYLTRANSFERASE REQUIRED FOR DYSTROGLYCAN JRNL TITL 2 O-MANNOSYLATION. JRNL REF CHEM.BIOL. V. 22 1643 2015 JRNL REFN ISSN 1074-5521 JRNL PMID 26687144 JRNL DOI 10.1016/J.CHEMBIOL.2015.10.014 REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 19687 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1066 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.39 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1455 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.3130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3044 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 58 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.58000 REMARK 3 B22 (A**2) : 0.19000 REMARK 3 B33 (A**2) : -0.77000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.302 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.237 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.161 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.847 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3107 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3050 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4211 ; 1.149 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7019 ; 0.713 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 390 ; 5.410 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 130 ;35.042 ;24.769 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 560 ;13.512 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;18.972 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 501 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3457 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 659 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1563 ; 4.972 ; 4.488 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1562 ; 4.956 ; 4.486 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1949 ; 6.990 ; 6.718 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1543 ; 6.246 ; 5.155 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY. MISSING RESIDUES 55-62 REMARK 3 320-333 REMARK 4 REMARK 4 4CVH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1290060134. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979500 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20791 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.390 REMARK 200 RESOLUTION RANGE LOW (A) : 65.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: ROSETTA REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 6.5, 25%(W/V) PEG REMARK 280 3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.90000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.90000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.68000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.40000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.68000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.40000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.90000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 39.68000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 58.40000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.90000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 39.68000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 58.40000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 79.36000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 55.90000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2058 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 55 REMARK 465 CYS A 56 REMARK 465 GLY A 57 REMARK 465 GLU A 58 REMARK 465 ARG A 59 REMARK 465 MET A 60 REMARK 465 GLY A 61 REMARK 465 VAL A 62 REMARK 465 GLY A 321 REMARK 465 HIS A 322 REMARK 465 ALA A 323 REMARK 465 GLY A 324 REMARK 465 ARG A 325 REMARK 465 HIS A 326 REMARK 465 LEU A 327 REMARK 465 GLN A 328 REMARK 465 GLN A 329 REMARK 465 ILE A 330 REMARK 465 ILE A 331 REMARK 465 LEU A 332 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 100 CG CD OE1 OE2 REMARK 470 LYS A 145 CG CD CE NZ REMARK 470 LYS A 175 CE NZ REMARK 470 GLU A 176 CD OE1 OE2 REMARK 470 ARG A 207 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 267 CE NZ REMARK 470 GLU A 318 CG CD OE1 OE2 REMARK 470 ASP A 333 CG OD1 OD2 REMARK 470 LYS A 380 CD CE NZ REMARK 470 LYS A 387 CG CD CE NZ REMARK 470 LYS A 399 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 161 69.16 -106.05 REMARK 500 LYS A 380 -72.89 -78.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1452 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1453 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1454 DBREF 4CVH A 43 451 UNP A4D126 ISPD_HUMAN 43 451 SEQADV 4CVH SER A 41 UNP A4D126 EXPRESSION TAG SEQADV 4CVH MET A 42 UNP A4D126 EXPRESSION TAG SEQRES 1 A 411 SER MET HIS PRO GLN ALA VAL ALA ALA VAL LEU PRO ALA SEQRES 2 A 411 GLY GLY CYS GLY GLU ARG MET GLY VAL PRO THR PRO LYS SEQRES 3 A 411 GLN PHE CYS PRO ILE LEU GLU ARG PRO LEU ILE SER TYR SEQRES 4 A 411 THR LEU GLN ALA LEU GLU ARG VAL CYS TRP ILE LYS ASP SEQRES 5 A 411 ILE VAL VAL ALA VAL THR GLY GLU ASN MET GLU VAL MET SEQRES 6 A 411 LYS SER ILE ILE GLN LYS TYR GLN HIS LYS ARG ILE SER SEQRES 7 A 411 LEU VAL GLU ALA GLY VAL THR ARG HIS ARG SER ILE PHE SEQRES 8 A 411 ASN GLY LEU LYS ALA LEU ALA GLU ASP GLN ILE ASN SER SEQRES 9 A 411 LYS LEU SER LYS PRO GLU VAL VAL ILE ILE HIS ASP ALA SEQRES 10 A 411 VAL ARG PRO PHE VAL GLU GLU GLY VAL LEU LEU LYS VAL SEQRES 11 A 411 VAL THR ALA ALA LYS GLU HIS GLY ALA ALA GLY ALA ILE SEQRES 12 A 411 ARG PRO LEU VAL SER THR VAL VAL SER PRO SER ALA ASP SEQRES 13 A 411 GLY CYS LEU ASP TYR SER LEU GLU ARG ALA ARG HIS ARG SEQRES 14 A 411 ALA SER GLU MET PRO GLN ALA PHE LEU PHE ASP VAL ILE SEQRES 15 A 411 TYR GLU ALA TYR GLN GLN CYS SER ASP TYR ASP LEU GLU SEQRES 16 A 411 PHE GLY THR GLU CYS LEU GLN LEU ALA LEU LYS TYR CYS SEQRES 17 A 411 CYS THR LYS ALA LYS LEU VAL GLU GLY SER PRO ASP LEU SEQRES 18 A 411 TRP LYS VAL THR TYR LYS ARG ASP LEU TYR ALA ALA GLU SEQRES 19 A 411 SER ILE ILE LYS GLU ARG ILE SER GLN GLU ILE CYS VAL SEQRES 20 A 411 VAL MET ASP THR GLU GLU ASP ASN LYS HIS VAL GLY HIS SEQRES 21 A 411 LEU LEU GLU GLU VAL LEU LYS SER GLU LEU ASN HIS VAL SEQRES 22 A 411 LYS VAL THR SER GLU ALA LEU GLY HIS ALA GLY ARG HIS SEQRES 23 A 411 LEU GLN GLN ILE ILE LEU ASP GLN CYS TYR ASN PHE VAL SEQRES 24 A 411 CYS VAL ASN VAL THR THR SER ASP PHE GLN GLU THR GLN SEQRES 25 A 411 LYS LEU LEU SER MET LEU GLU GLU SER SER LEU CYS ILE SEQRES 26 A 411 LEU TYR PRO VAL VAL VAL VAL SER VAL HIS PHE LEU ASP SEQRES 27 A 411 PHE LYS LEU VAL PRO PRO SER GLN LYS MET GLU ASN LEU SEQRES 28 A 411 MET GLN ILE ARG GLU PHE ALA LYS GLU VAL LYS GLU ARG SEQRES 29 A 411 ASN ILE LEU LEU TYR GLY LEU LEU ILE SER TYR PRO GLN SEQRES 30 A 411 ASP ASP GLN LYS LEU GLN GLU SER LEU ARG GLN GLY ALA SEQRES 31 A 411 ILE ILE ILE ALA SER LEU ILE LYS GLU ARG ASN SER GLY SEQRES 32 A 411 LEU ILE GLY GLN LEU LEU ILE ALA HET MG A1452 1 HET EDO A1453 4 HET CL A1454 1 HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 MG MG 2+ FORMUL 3 EDO C2 H6 O2 FORMUL 4 CL CL 1- FORMUL 5 HOH *58(H2 O) HELIX 1 1 LEU A 76 ARG A 86 1 11 HELIX 2 2 THR A 98 GLU A 100 5 3 HELIX 3 3 ASN A 101 GLN A 113 1 13 HELIX 4 4 THR A 125 ALA A 138 1 14 HELIX 5 5 GLU A 163 GLY A 178 1 16 HELIX 6 6 GLU A 204 ARG A 207 5 4 HELIX 7 7 PHE A 219 CYS A 229 1 11 HELIX 8 8 SER A 230 GLY A 237 1 8 HELIX 9 9 GLU A 239 CYS A 249 1 11 HELIX 10 10 SER A 258 TRP A 262 5 5 HELIX 11 11 TYR A 266 ILE A 281 1 16 HELIX 12 12 GLU A 292 LEU A 310 1 19 HELIX 13 13 PHE A 348 SER A 361 1 14 HELIX 14 14 SER A 362 TYR A 367 1 6 HELIX 15 15 PRO A 384 MET A 392 1 9 HELIX 16 16 GLN A 393 GLU A 403 1 11 HELIX 17 17 ASP A 418 ARG A 440 1 23 HELIX 18 18 ASN A 441 ILE A 445 5 5 SHEET 1 AA 7 ILE A 117 GLU A 121 0 SHEET 2 AA 7 ILE A 90 VAL A 97 1 O ILE A 93 N SER A 118 SHEET 3 AA 7 VAL A 47 PRO A 52 1 O VAL A 47 N LYS A 91 SHEET 4 AA 7 VAL A 151 ILE A 154 1 O VAL A 151 N ALA A 48 SHEET 5 AA 7 ARG A 209 LEU A 218 -1 O GLN A 215 N ILE A 154 SHEET 6 AA 7 ALA A 179 PRO A 185 -1 O ALA A 180 N ALA A 216 SHEET 7 AA 7 LYS A 253 GLU A 256 1 O LYS A 253 N GLY A 181 SHEET 1 AB 2 PRO A 70 ILE A 71 0 SHEET 2 AB 2 ARG A 74 PRO A 75 -1 O ARG A 74 N ILE A 71 SHEET 1 AC 2 VAL A 191 PRO A 193 0 SHEET 2 AC 2 LEU A 199 SER A 202 -1 N ASP A 200 O SER A 192 SHEET 1 AD 6 LYS A 314 ALA A 319 0 SHEET 2 AD 6 GLU A 284 MET A 289 1 O ILE A 285 N THR A 316 SHEET 3 AD 6 ASN A 337 ASN A 342 1 O ASN A 337 N CYS A 286 SHEET 4 AD 6 VAL A 369 LEU A 377 1 O VAL A 370 N PHE A 338 SHEET 5 AD 6 ILE A 406 SER A 414 1 O LEU A 407 N VAL A 371 SHEET 6 AD 6 LEU A 448 ILE A 450 1 O LEU A 449 N LEU A 412 CISPEP 1 MET A 213 PRO A 214 0 4.65 CISPEP 2 TYR A 415 PRO A 416 0 0.59 SITE 1 AC1 6 THR A 125 ARG A 126 HIS A 127 LEU A 234 SITE 2 AC1 6 GLU A 235 GLY A 237 SITE 1 AC2 4 GLU A 85 TYR A 112 GLN A 113 HIS A 114 SITE 1 AC3 3 ARG A 128 ASN A 132 GLU A 293 CRYST1 79.360 116.800 111.800 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012601 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008562 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008945 0.00000