HEADER METAL BINDING PROTEIN 31-JAN-12 4DIR TITLE 2.6 ANGSTROM X-RAY STRUCTURE OF HUMAN CA(2+)-S100A5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN S100-A5; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTEIN S-100D, S100 CALCIUM-BINDING PROTEIN A5; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: S100A5, S100D; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11B KEYWDS ALPHA-HELICAL, EF HAND, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.A.LIRIANO,E.A.TOTH,D.J.WEBER REVDAT 2 28-FEB-24 4DIR 1 REMARK LINK REVDAT 1 13-FEB-13 4DIR 0 JRNL AUTH M.A.LIRIANO,K.M.VARNEY,R.ISHIMA,E.A.TOTH,D.J.WEBER JRNL TITL TARGET-BINDING TO S100A5 CHANGES CA(2+)-BINDING AFFINITY AND JRNL TITL 2 DYNAMICS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 5442 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 259 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 425 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3340 REMARK 3 BIN FREE R VALUE SET COUNT : 11 REMARK 3 BIN FREE R VALUE : 0.4720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1183 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 14 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 114.6 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.05000 REMARK 3 B22 (A**2) : 1.05000 REMARK 3 B33 (A**2) : -2.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.882 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.351 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.272 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 30.068 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1197 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1622 ; 1.723 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 157 ; 5.223 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 47 ;33.751 ;25.319 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 187 ;20.883 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 9.361 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 199 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 879 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 799 ; 4.135 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1252 ; 6.454 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 398 ; 3.974 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 370 ; 6.744 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 41 REMARK 3 RESIDUE RANGE : A 101 A 101 REMARK 3 ORIGIN FOR THE GROUP (A): -11.0054 14.1450 -7.1275 REMARK 3 T TENSOR REMARK 3 T11: 0.2745 T22: 0.2750 REMARK 3 T33: 0.4185 T12: -0.0483 REMARK 3 T13: -0.0807 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 3.3952 L22: -1.4208 REMARK 3 L33: 2.8161 L12: -1.5114 REMARK 3 L13: 1.7004 L23: 0.1113 REMARK 3 S TENSOR REMARK 3 S11: 0.1221 S12: 0.1473 S13: -0.3938 REMARK 3 S21: -0.0243 S22: 0.0920 S23: 0.0784 REMARK 3 S31: 0.2746 S32: -0.0296 S33: -0.2141 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 50 A 87 REMARK 3 RESIDUE RANGE : A 102 A 102 REMARK 3 ORIGIN FOR THE GROUP (A): -11.7609 23.7532 -0.6088 REMARK 3 T TENSOR REMARK 3 T11: 0.2646 T22: 0.3825 REMARK 3 T33: 0.3160 T12: 0.0375 REMARK 3 T13: 0.0300 T23: -0.0550 REMARK 3 L TENSOR REMARK 3 L11: 2.0909 L22: 0.0463 REMARK 3 L33: 2.8818 L12: -0.6837 REMARK 3 L13: 1.6725 L23: -1.9776 REMARK 3 S TENSOR REMARK 3 S11: -0.1190 S12: -0.1884 S13: 0.2924 REMARK 3 S21: -0.0137 S22: -0.0347 S23: -0.0502 REMARK 3 S31: -0.0466 S32: -0.0056 S33: 0.1537 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 42 REMARK 3 RESIDUE RANGE : B 101 B 101 REMARK 3 ORIGIN FOR THE GROUP (A): 6.5667 18.0444 7.5937 REMARK 3 T TENSOR REMARK 3 T11: 0.2370 T22: 0.4061 REMARK 3 T33: 0.2694 T12: 0.0877 REMARK 3 T13: 0.0152 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 2.3107 L22: 0.3904 REMARK 3 L33: 1.2910 L12: 1.3776 REMARK 3 L13: 2.0220 L23: 0.9246 REMARK 3 S TENSOR REMARK 3 S11: -0.0682 S12: -0.1696 S13: 0.1871 REMARK 3 S21: -0.0168 S22: -0.0234 S23: -0.0764 REMARK 3 S31: 0.5149 S32: 0.1132 S33: 0.0916 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 47 B 87 REMARK 3 RESIDUE RANGE : B 102 B 102 REMARK 3 ORIGIN FOR THE GROUP (A): 6.6300 25.3901 -1.4542 REMARK 3 T TENSOR REMARK 3 T11: 0.2458 T22: 0.3576 REMARK 3 T33: 0.2263 T12: 0.0613 REMARK 3 T13: 0.0194 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 2.3030 L22: 0.6854 REMARK 3 L33: 0.7079 L12: 0.6483 REMARK 3 L13: 2.5012 L23: 0.3118 REMARK 3 S TENSOR REMARK 3 S11: -0.1887 S12: 0.3096 S13: 0.0236 REMARK 3 S21: -0.1558 S22: 0.0242 S23: -0.0891 REMARK 3 S31: -0.2215 S32: -0.2959 S33: 0.1646 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4DIR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070380. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 2.0 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5442 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 52.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG 3350, 7.5MM CACL2, 0.2M REMARK 280 POTASSIUM THIOCYANATE, PH 7.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.50600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 16.75300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 50.25900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLU A 1 REMARK 465 CYS A 42 REMARK 465 LEU A 43 REMARK 465 GLY A 44 REMARK 465 GLU A 45 REMARK 465 MET A 46 REMARK 465 LYS A 47 REMARK 465 GLU A 48 REMARK 465 SER A 49 REMARK 465 GLU A 88 REMARK 465 ASP A 89 REMARK 465 ASN A 90 REMARK 465 LYS A 91 REMARK 465 MET B 0 REMARK 465 LEU B 43 REMARK 465 GLY B 44 REMARK 465 GLU B 45 REMARK 465 MET B 46 REMARK 465 GLU B 88 REMARK 465 ASP B 89 REMARK 465 ASN B 90 REMARK 465 LYS B 91 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 2 OG1 CG2 REMARK 470 GLU A 5 OE1 OE2 REMARK 470 LYS A 6 CG CD CE NZ REMARK 470 LYS A 25 CG CD CE NZ REMARK 470 LYS A 31 CG CD CE NZ REMARK 470 LYS A 34 CG CD CE NZ REMARK 470 GLU A 35 CG CD OE1 OE2 REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 LYS A 39 CD CE NZ REMARK 470 LEU A 41 CG CD1 CD2 REMARK 470 SER A 50 OG REMARK 470 ILE A 51 CG1 CG2 CD1 REMARK 470 ASP A 53 CG OD1 OD2 REMARK 470 LYS A 56 CG CD CE NZ REMARK 470 SER A 57 OG REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 LYS A 69 CG CD CE NZ REMARK 470 PHE A 85 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU B 4 CD1 REMARK 470 LYS B 6 CG CD CE NZ REMARK 470 LYS B 17 CG CD CE NZ REMARK 470 ARG B 21 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 31 CG CD CE NZ REMARK 470 LYS B 34 CG CD CE NZ REMARK 470 LYS B 38 CG CD CE NZ REMARK 470 LYS B 39 CG CD CE NZ REMARK 470 GLU B 48 CG CD OE1 OE2 REMARK 470 ILE B 51 CG1 CG2 CD1 REMARK 470 ASP B 52 CG OD1 OD2 REMARK 470 LYS B 56 CG CD CE NZ REMARK 470 SER B 57 OG REMARK 470 LYS B 60 CG CD CE NZ REMARK 470 SER B 62 OG REMARK 470 GLN B 64 CG CD OE1 NE2 REMARK 470 LYS B 69 CG CD CE NZ REMARK 470 SER B 72 OG REMARK 470 LEU B 75 CD1 REMARK 470 MET B 77 CG SD CE REMARK 470 PHE B 85 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 37 -64.26 88.50 REMARK 500 PHE A 85 -7.87 -57.16 REMARK 500 SER B 49 79.27 -64.01 REMARK 500 ASP B 59 86.47 -66.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 19 O REMARK 620 2 GLU A 22 O 101.5 REMARK 620 3 SER A 24 O 73.5 88.0 REMARK 620 4 THR A 27 O 89.1 164.0 83.6 REMARK 620 5 GLU A 32 OE1 98.9 108.0 163.6 81.8 REMARK 620 6 GLU A 32 OE2 70.4 73.7 134.8 121.6 50.7 REMARK 620 7 HOH A 203 O 153.1 90.7 83.2 74.9 99.9 136.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 59 OD1 REMARK 620 2 ASN A 61 OD1 83.5 REMARK 620 3 ASP A 63 OD1 77.1 81.0 REMARK 620 4 GLU A 65 O 80.1 155.1 77.2 REMARK 620 5 GLU A 70 OE1 103.8 122.9 156.1 79.4 REMARK 620 6 GLU A 70 OE2 85.5 74.6 151.5 122.1 50.4 REMARK 620 7 HOH A 202 O 172.6 91.4 107.5 106.5 74.5 88.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 19 O REMARK 620 2 GLU B 22 O 104.9 REMARK 620 3 SER B 24 O 82.2 89.0 REMARK 620 4 THR B 27 O 97.6 157.2 90.9 REMARK 620 5 GLU B 32 OE1 96.1 107.0 163.8 73.3 REMARK 620 6 GLU B 32 OE2 67.3 74.1 139.1 118.8 51.9 REMARK 620 7 HOH B 202 O 161.4 93.3 94.9 64.0 81.5 122.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 59 OD1 REMARK 620 2 ASN B 61 OD1 85.1 REMARK 620 3 ASP B 63 OD1 82.0 79.0 REMARK 620 4 GLU B 65 O 83.8 157.4 80.0 REMARK 620 5 GLU B 70 OE1 103.4 124.1 156.3 77.8 REMARK 620 6 GLU B 70 OE2 85.0 79.5 155.7 118.9 47.5 REMARK 620 7 HOH B 207 O 172.6 93.0 90.6 95.5 83.6 101.7 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 102 DBREF 4DIR A 0 91 UNP P33763 S10A5_HUMAN 1 92 DBREF 4DIR B 0 91 UNP P33763 S10A5_HUMAN 1 92 SEQRES 1 A 92 MET GLU THR PRO LEU GLU LYS ALA LEU THR THR MET VAL SEQRES 2 A 92 THR THR PHE HIS LYS TYR SER GLY ARG GLU GLY SER LYS SEQRES 3 A 92 LEU THR LEU SER ARG LYS GLU LEU LYS GLU LEU ILE LYS SEQRES 4 A 92 LYS GLU LEU CYS LEU GLY GLU MET LYS GLU SER SER ILE SEQRES 5 A 92 ASP ASP LEU MET LYS SER LEU ASP LYS ASN SER ASP GLN SEQRES 6 A 92 GLU ILE ASP PHE LYS GLU TYR SER VAL PHE LEU THR MET SEQRES 7 A 92 LEU CYS MET ALA TYR ASN ASP PHE PHE LEU GLU ASP ASN SEQRES 8 A 92 LYS SEQRES 1 B 92 MET GLU THR PRO LEU GLU LYS ALA LEU THR THR MET VAL SEQRES 2 B 92 THR THR PHE HIS LYS TYR SER GLY ARG GLU GLY SER LYS SEQRES 3 B 92 LEU THR LEU SER ARG LYS GLU LEU LYS GLU LEU ILE LYS SEQRES 4 B 92 LYS GLU LEU CYS LEU GLY GLU MET LYS GLU SER SER ILE SEQRES 5 B 92 ASP ASP LEU MET LYS SER LEU ASP LYS ASN SER ASP GLN SEQRES 6 B 92 GLU ILE ASP PHE LYS GLU TYR SER VAL PHE LEU THR MET SEQRES 7 B 92 LEU CYS MET ALA TYR ASN ASP PHE PHE LEU GLU ASP ASN SEQRES 8 B 92 LYS HET CA A 101 1 HET CA A 102 1 HET CA B 101 1 HET CA B 102 1 HETNAM CA CALCIUM ION FORMUL 3 CA 4(CA 2+) FORMUL 7 HOH *14(H2 O) HELIX 1 1 THR A 2 GLY A 20 1 19 HELIX 2 2 SER A 29 LYS A 39 1 11 HELIX 3 3 ILE A 51 ASP A 59 1 9 HELIX 4 4 PHE A 68 PHE A 85 1 18 HELIX 5 5 THR B 2 GLY B 20 1 19 HELIX 6 6 SER B 29 LEU B 41 1 13 HELIX 7 7 SER B 50 ASP B 59 1 10 HELIX 8 8 ASP B 67 LEU B 87 1 21 SHEET 1 A 2 THR A 27 LEU A 28 0 SHEET 2 A 2 ILE A 66 ASP A 67 -1 O ILE A 66 N LEU A 28 LINK O SER A 19 CA CA A 101 1555 1555 2.22 LINK O GLU A 22 CA CA A 101 1555 1555 2.30 LINK O SER A 24 CA CA A 101 1555 1555 2.48 LINK O THR A 27 CA CA A 101 1555 1555 2.29 LINK OE1 GLU A 32 CA CA A 101 1555 1555 2.16 LINK OE2 GLU A 32 CA CA A 101 1555 1555 2.77 LINK OD1 ASP A 59 CA CA A 102 1555 1555 2.52 LINK OD1 ASN A 61 CA CA A 102 1555 1555 2.09 LINK OD1 ASP A 63 CA CA A 102 1555 1555 2.30 LINK O GLU A 65 CA CA A 102 1555 1555 2.39 LINK OE1 GLU A 70 CA CA A 102 1555 1555 2.33 LINK OE2 GLU A 70 CA CA A 102 1555 1555 2.79 LINK CA CA A 101 O HOH A 203 1555 1555 2.29 LINK CA CA A 102 O HOH A 202 1555 1555 2.49 LINK O SER B 19 CA CA B 101 1555 1555 2.14 LINK O GLU B 22 CA CA B 101 1555 1555 2.25 LINK O SER B 24 CA CA B 101 1555 1555 2.33 LINK O THR B 27 CA CA B 101 1555 1555 2.17 LINK OE1 GLU B 32 CA CA B 101 1555 1555 2.35 LINK OE2 GLU B 32 CA CA B 101 1555 1555 2.66 LINK OD1 ASP B 59 CA CA B 102 1555 1555 2.36 LINK OD1 ASN B 61 CA CA B 102 1555 1555 2.03 LINK OD1 ASP B 63 CA CA B 102 1555 1555 2.23 LINK O GLU B 65 CA CA B 102 1555 1555 2.45 LINK OE1 GLU B 70 CA CA B 102 1555 1555 2.44 LINK OE2 GLU B 70 CA CA B 102 1555 1555 2.90 LINK CA CA B 101 O HOH B 202 1555 1555 2.40 LINK CA CA B 102 O HOH B 207 1555 1555 2.72 SITE 1 AC1 6 SER A 19 GLU A 22 SER A 24 THR A 27 SITE 2 AC1 6 GLU A 32 HOH A 203 SITE 1 AC2 6 ASP A 59 ASN A 61 ASP A 63 GLU A 65 SITE 2 AC2 6 GLU A 70 HOH A 202 SITE 1 AC3 6 SER B 19 GLU B 22 SER B 24 THR B 27 SITE 2 AC3 6 GLU B 32 HOH B 202 SITE 1 AC4 6 ASP B 59 ASN B 61 ASP B 63 GLU B 65 SITE 2 AC4 6 GLU B 70 HOH B 207 CRYST1 52.692 52.692 67.012 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018978 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018978 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014923 0.00000