data_4DPV # _entry.id 4DPV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.368 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DPV pdb_00004dpv 10.2210/pdb4dpv/pdb RCSB PDV006 ? ? WWPDB D_1000179303 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 1997-04-01 _pdbx_database_PDB_obs_spr.pdb_id 4DPV _pdbx_database_PDB_obs_spr.replace_pdb_id 3DPV _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2CAS 'EMPTY CANINE PARVOVIRUS (NO DNA)' unspecified PDB 1FPV 'FELINE PANLEUKOPENIA VIRUS' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DPV _pdbx_database_status.recvd_initial_deposition_date 1996-02-01 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chapman, M.S.' 1 'Rossmann, M.G.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Canine parvovirus capsid structure, analyzed at 2.9 A resolution.' J.Mol.Biol. 264 497 520 1996 JMOBAK UK 0022-2836 0070 ? 8969301 10.1006/jmbi.1996.0657 1 'Structural Refinement of the DNA-Containing Capsid of Canine Parvovirus Using a New Restrained Real Space Method' 'Acta Crystallogr.,Sect.D' 52 129 ? 1996 ABCRE6 DK 0907-4449 0766 ? ? ? 2 'Single-Stranded DNA-Protein Interactions in Canine Parvovirus' Structure 3 151 162 1995 STRUE6 UK 0969-2126 2005 ? ? ? 3 'Restrained Real-Space Macromolecular Atomic Refinement Using a New Resolution- Dependent Electron Density Function' 'Acta Crystallogr.,Sect.A' 51 69 ? 1995 ACACEQ DK 0108-7673 0621 ? ? ? 4 'Structure, Sequence, and Function Correlations Among Parvoviruses' Virology 194 491 ? 1993 VIRLAX US 0042-6822 0922 ? ? ? 5 'Ab Initio Phase Determination for Spherical Viruses: Parameter Determination for Spherical-Shell Models' 'Acta Crystallogr.,Sect.A' 48 301 ? 1992 ACACEQ DK 0108-7673 0621 ? ? ? 6 'Structure Determination of Monoclinic Canine Parvovirus' 'Acta Crystallogr.,Sect.B' 48 75 ? 1992 ASBSDK DK 0108-7681 0622 ? ? ? 7 'The Three-Dimensional Structure of Canine Parvovirus and its Functional Implications' Science 251 1456 ? 1991 SCIEAS US 0036-8075 0038 ? ? ? 8 'Preliminary X-Ray Crystallographic Analysis of Canine Parvovirus Crystals' J.Mol.Biol. 200 209 ? 1988 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xie, Q.' 1 ? primary 'Chapman, M.S.' 2 ? 1 'Chapman, M.S.' 3 ? 1 'Rossmann, M.G.' 4 ? 2 'Chapman, M.S.' 5 ? 2 'Rossmann, M.G.' 6 ? 3 'Chapman, M.S.' 7 ? 4 'Chapman, M.S.' 8 ? 4 'Rossmann, M.G.' 9 ? 5 'Chapman, M.S.' 10 ? 5 'Tsao, J.' 11 ? 5 'Rossmann, M.G.' 12 ? 6 'Tsao, J.' 13 ? 6 'Chapman, M.S.' 14 ? 6 'Wu, H.' 15 ? 6 'Agbandje, M.' 16 ? 6 'Keller, W.' 17 ? 6 'Rossmann, M.G.' 18 ? 7 'Tsao, J.' 19 ? 7 'Chapman, M.S.' 20 ? 7 'Agbandje, M.' 21 ? 7 'Keller, W.' 22 ? 7 'Smith, K.' 23 ? 7 'Wu, H.' 24 ? 7 'Luo, M.' 25 ? 7 'Smith, T.J.' 26 ? 7 'Rossmann, M.G.' 27 ? 7 'Compans, R.W.' 28 ? 7 'al., et' 29 ? 8 'Luo, M.' 30 ? 8 'Tsao, J.' 31 ? 8 'Rossmann, M.G.' 32 ? 8 'Basak, S.' 33 ? 8 'Compans, R.W.' 34 ? # _cell.entry_id 4DPV _cell.length_a 263.210 _cell.length_b 349.010 _cell.length_c 267.320 _cell.angle_alpha 90.00 _cell.angle_beta 90.82 _cell.angle_gamma 90.00 _cell.Z_PDB 120 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DPV _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*AP*TP*AP*CP*CP*TP*CP*TP*TP*GP*C)-3') ; 3284.160 1 ? ? ? ? 2 polymer nat 'PROTEIN (PARVOVIRUS COAT PROTEIN)' 64705.559 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 4 ? ? ? ? # _entity_keywords.entity_id 1 _entity_keywords.text 'PART OF SS-DNA GENOME' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DT)(DA)(DC)(DC)(DT)(DC)(DT)(DT)(DG)(DC)' ATACCTCTTGC N ? 2 'polypeptide(L)' no no ;MSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTFNNQTEFKFLENGWVEITANSSRLVHLNMPESENYR RVVVNNMDKTAVNGNMALDDIHAQIVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQP PTKVYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSHTGTSGTPTNIYHGTDPDD VQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQTNRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMG NTNYITEATIMRPAEVGYSAPYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGNPRYAFGRQHGQKTTTTGETPERFTY IAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALNNVPPVYPNGQIWDKEFDTDLKP RLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASANMSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFN YVPSNIGGMKIVYEKSQLAPRKLY ; ;MSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTFNNQTEFKFLENGWVEITANSSRLVHLNMPESENYR RVVVNNMDKTAVNGNMALDDIHAQIVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQP PTKVYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSHTGTSGTPTNIYHGTDPDD VQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQTNRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMG NTNYITEATIMRPAEVGYSAPYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGNPRYAFGRQHGQKTTTTGETPERFTY IAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALNNVPPVYPNGQIWDKEFDTDLKP RLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASANMSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFN YVPSNIGGMKIVYEKSQLAPRKLY ; Z ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DT n 1 3 DA n 1 4 DC n 1 5 DC n 1 6 DT n 1 7 DC n 1 8 DT n 1 9 DT n 1 10 DG n 1 11 DC n 2 1 MET n 2 2 SER n 2 3 ASP n 2 4 GLY n 2 5 ALA n 2 6 VAL n 2 7 GLN n 2 8 PRO n 2 9 ASP n 2 10 GLY n 2 11 GLY n 2 12 GLN n 2 13 PRO n 2 14 ALA n 2 15 VAL n 2 16 ARG n 2 17 ASN n 2 18 GLU n 2 19 ARG n 2 20 ALA n 2 21 THR n 2 22 GLY n 2 23 SER n 2 24 GLY n 2 25 ASN n 2 26 GLY n 2 27 SER n 2 28 GLY n 2 29 GLY n 2 30 GLY n 2 31 GLY n 2 32 GLY n 2 33 GLY n 2 34 GLY n 2 35 SER n 2 36 GLY n 2 37 GLY n 2 38 VAL n 2 39 GLY n 2 40 ILE n 2 41 SER n 2 42 THR n 2 43 GLY n 2 44 THR n 2 45 PHE n 2 46 ASN n 2 47 ASN n 2 48 GLN n 2 49 THR n 2 50 GLU n 2 51 PHE n 2 52 LYS n 2 53 PHE n 2 54 LEU n 2 55 GLU n 2 56 ASN n 2 57 GLY n 2 58 TRP n 2 59 VAL n 2 60 GLU n 2 61 ILE n 2 62 THR n 2 63 ALA n 2 64 ASN n 2 65 SER n 2 66 SER n 2 67 ARG n 2 68 LEU n 2 69 VAL n 2 70 HIS n 2 71 LEU n 2 72 ASN n 2 73 MET n 2 74 PRO n 2 75 GLU n 2 76 SER n 2 77 GLU n 2 78 ASN n 2 79 TYR n 2 80 ARG n 2 81 ARG n 2 82 VAL n 2 83 VAL n 2 84 VAL n 2 85 ASN n 2 86 ASN n 2 87 MET n 2 88 ASP n 2 89 LYS n 2 90 THR n 2 91 ALA n 2 92 VAL n 2 93 ASN n 2 94 GLY n 2 95 ASN n 2 96 MET n 2 97 ALA n 2 98 LEU n 2 99 ASP n 2 100 ASP n 2 101 ILE n 2 102 HIS n 2 103 ALA n 2 104 GLN n 2 105 ILE n 2 106 VAL n 2 107 THR n 2 108 PRO n 2 109 TRP n 2 110 SER n 2 111 LEU n 2 112 VAL n 2 113 ASP n 2 114 ALA n 2 115 ASN n 2 116 ALA n 2 117 TRP n 2 118 GLY n 2 119 VAL n 2 120 TRP n 2 121 PHE n 2 122 ASN n 2 123 PRO n 2 124 GLY n 2 125 ASP n 2 126 TRP n 2 127 GLN n 2 128 LEU n 2 129 ILE n 2 130 VAL n 2 131 ASN n 2 132 THR n 2 133 MET n 2 134 SER n 2 135 GLU n 2 136 LEU n 2 137 HIS n 2 138 LEU n 2 139 VAL n 2 140 SER n 2 141 PHE n 2 142 GLU n 2 143 GLN n 2 144 GLU n 2 145 ILE n 2 146 PHE n 2 147 ASN n 2 148 VAL n 2 149 VAL n 2 150 LEU n 2 151 LYS n 2 152 THR n 2 153 VAL n 2 154 SER n 2 155 GLU n 2 156 SER n 2 157 ALA n 2 158 THR n 2 159 GLN n 2 160 PRO n 2 161 PRO n 2 162 THR n 2 163 LYS n 2 164 VAL n 2 165 TYR n 2 166 ASN n 2 167 ASN n 2 168 ASP n 2 169 LEU n 2 170 THR n 2 171 ALA n 2 172 SER n 2 173 LEU n 2 174 MET n 2 175 VAL n 2 176 ALA n 2 177 LEU n 2 178 ASP n 2 179 SER n 2 180 ASN n 2 181 ASN n 2 182 THR n 2 183 MET n 2 184 PRO n 2 185 PHE n 2 186 THR n 2 187 PRO n 2 188 ALA n 2 189 ALA n 2 190 MET n 2 191 ARG n 2 192 SER n 2 193 GLU n 2 194 THR n 2 195 LEU n 2 196 GLY n 2 197 PHE n 2 198 TYR n 2 199 PRO n 2 200 TRP n 2 201 LYS n 2 202 PRO n 2 203 THR n 2 204 ILE n 2 205 PRO n 2 206 THR n 2 207 PRO n 2 208 TRP n 2 209 ARG n 2 210 TYR n 2 211 TYR n 2 212 PHE n 2 213 GLN n 2 214 TRP n 2 215 ASP n 2 216 ARG n 2 217 THR n 2 218 LEU n 2 219 ILE n 2 220 PRO n 2 221 SER n 2 222 HIS n 2 223 THR n 2 224 GLY n 2 225 THR n 2 226 SER n 2 227 GLY n 2 228 THR n 2 229 PRO n 2 230 THR n 2 231 ASN n 2 232 ILE n 2 233 TYR n 2 234 HIS n 2 235 GLY n 2 236 THR n 2 237 ASP n 2 238 PRO n 2 239 ASP n 2 240 ASP n 2 241 VAL n 2 242 GLN n 2 243 PHE n 2 244 TYR n 2 245 THR n 2 246 ILE n 2 247 GLU n 2 248 ASN n 2 249 SER n 2 250 VAL n 2 251 PRO n 2 252 VAL n 2 253 HIS n 2 254 LEU n 2 255 LEU n 2 256 ARG n 2 257 THR n 2 258 GLY n 2 259 ASP n 2 260 GLU n 2 261 PHE n 2 262 ALA n 2 263 THR n 2 264 GLY n 2 265 THR n 2 266 PHE n 2 267 PHE n 2 268 PHE n 2 269 ASP n 2 270 CYS n 2 271 LYS n 2 272 PRO n 2 273 CYS n 2 274 ARG n 2 275 LEU n 2 276 THR n 2 277 HIS n 2 278 THR n 2 279 TRP n 2 280 GLN n 2 281 THR n 2 282 ASN n 2 283 ARG n 2 284 ALA n 2 285 LEU n 2 286 GLY n 2 287 LEU n 2 288 PRO n 2 289 PRO n 2 290 PHE n 2 291 LEU n 2 292 ASN n 2 293 SER n 2 294 LEU n 2 295 PRO n 2 296 GLN n 2 297 SER n 2 298 GLU n 2 299 GLY n 2 300 ALA n 2 301 THR n 2 302 ASN n 2 303 PHE n 2 304 GLY n 2 305 ASP n 2 306 ILE n 2 307 GLY n 2 308 VAL n 2 309 GLN n 2 310 GLN n 2 311 ASP n 2 312 LYS n 2 313 ARG n 2 314 ARG n 2 315 GLY n 2 316 VAL n 2 317 THR n 2 318 GLN n 2 319 MET n 2 320 GLY n 2 321 ASN n 2 322 THR n 2 323 ASN n 2 324 TYR n 2 325 ILE n 2 326 THR n 2 327 GLU n 2 328 ALA n 2 329 THR n 2 330 ILE n 2 331 MET n 2 332 ARG n 2 333 PRO n 2 334 ALA n 2 335 GLU n 2 336 VAL n 2 337 GLY n 2 338 TYR n 2 339 SER n 2 340 ALA n 2 341 PRO n 2 342 TYR n 2 343 TYR n 2 344 SER n 2 345 PHE n 2 346 GLU n 2 347 ALA n 2 348 SER n 2 349 THR n 2 350 GLN n 2 351 GLY n 2 352 PRO n 2 353 PHE n 2 354 LYS n 2 355 THR n 2 356 PRO n 2 357 ILE n 2 358 ALA n 2 359 ALA n 2 360 GLY n 2 361 ARG n 2 362 GLY n 2 363 GLY n 2 364 ALA n 2 365 GLN n 2 366 THR n 2 367 ASP n 2 368 GLU n 2 369 ASN n 2 370 GLN n 2 371 ALA n 2 372 ALA n 2 373 ASP n 2 374 GLY n 2 375 ASN n 2 376 PRO n 2 377 ARG n 2 378 TYR n 2 379 ALA n 2 380 PHE n 2 381 GLY n 2 382 ARG n 2 383 GLN n 2 384 HIS n 2 385 GLY n 2 386 GLN n 2 387 LYS n 2 388 THR n 2 389 THR n 2 390 THR n 2 391 THR n 2 392 GLY n 2 393 GLU n 2 394 THR n 2 395 PRO n 2 396 GLU n 2 397 ARG n 2 398 PHE n 2 399 THR n 2 400 TYR n 2 401 ILE n 2 402 ALA n 2 403 HIS n 2 404 GLN n 2 405 ASP n 2 406 THR n 2 407 GLY n 2 408 ARG n 2 409 TYR n 2 410 PRO n 2 411 GLU n 2 412 GLY n 2 413 ASP n 2 414 TRP n 2 415 ILE n 2 416 GLN n 2 417 ASN n 2 418 ILE n 2 419 ASN n 2 420 PHE n 2 421 ASN n 2 422 LEU n 2 423 PRO n 2 424 VAL n 2 425 THR n 2 426 ASN n 2 427 ASP n 2 428 ASN n 2 429 VAL n 2 430 LEU n 2 431 LEU n 2 432 PRO n 2 433 THR n 2 434 ASP n 2 435 PRO n 2 436 ILE n 2 437 GLY n 2 438 GLY n 2 439 LYS n 2 440 THR n 2 441 GLY n 2 442 ILE n 2 443 ASN n 2 444 TYR n 2 445 THR n 2 446 ASN n 2 447 ILE n 2 448 PHE n 2 449 ASN n 2 450 THR n 2 451 TYR n 2 452 GLY n 2 453 PRO n 2 454 LEU n 2 455 THR n 2 456 ALA n 2 457 LEU n 2 458 ASN n 2 459 ASN n 2 460 VAL n 2 461 PRO n 2 462 PRO n 2 463 VAL n 2 464 TYR n 2 465 PRO n 2 466 ASN n 2 467 GLY n 2 468 GLN n 2 469 ILE n 2 470 TRP n 2 471 ASP n 2 472 LYS n 2 473 GLU n 2 474 PHE n 2 475 ASP n 2 476 THR n 2 477 ASP n 2 478 LEU n 2 479 LYS n 2 480 PRO n 2 481 ARG n 2 482 LEU n 2 483 HIS n 2 484 VAL n 2 485 ASN n 2 486 ALA n 2 487 PRO n 2 488 PHE n 2 489 VAL n 2 490 CYS n 2 491 GLN n 2 492 ASN n 2 493 ASN n 2 494 CYS n 2 495 PRO n 2 496 GLY n 2 497 GLN n 2 498 LEU n 2 499 PHE n 2 500 VAL n 2 501 LYS n 2 502 VAL n 2 503 ALA n 2 504 PRO n 2 505 ASN n 2 506 LEU n 2 507 THR n 2 508 ASN n 2 509 GLU n 2 510 TYR n 2 511 ASP n 2 512 PRO n 2 513 ASP n 2 514 ALA n 2 515 SER n 2 516 ALA n 2 517 ASN n 2 518 MET n 2 519 SER n 2 520 ARG n 2 521 ILE n 2 522 VAL n 2 523 THR n 2 524 TYR n 2 525 SER n 2 526 ASP n 2 527 PHE n 2 528 TRP n 2 529 TRP n 2 530 LYS n 2 531 GLY n 2 532 LYS n 2 533 LEU n 2 534 VAL n 2 535 PHE n 2 536 LYS n 2 537 ALA n 2 538 LYS n 2 539 LEU n 2 540 ARG n 2 541 ALA n 2 542 SER n 2 543 HIS n 2 544 THR n 2 545 TRP n 2 546 ASN n 2 547 PRO n 2 548 ILE n 2 549 GLN n 2 550 GLN n 2 551 MET n 2 552 SER n 2 553 ILE n 2 554 ASN n 2 555 VAL n 2 556 ASP n 2 557 ASN n 2 558 GLN n 2 559 PHE n 2 560 ASN n 2 561 TYR n 2 562 VAL n 2 563 PRO n 2 564 SER n 2 565 ASN n 2 566 ILE n 2 567 GLY n 2 568 GLY n 2 569 MET n 2 570 LYS n 2 571 ILE n 2 572 VAL n 2 573 TYR n 2 574 GLU n 2 575 LYS n 2 576 SER n 2 577 GLN n 2 578 LEU n 2 579 ALA n 2 580 PRO n 2 581 ARG n 2 582 LYS n 2 583 LEU n 2 584 TYR n # _entity_src_nat.entity_id 2 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Canine parvovirus' _entity_src_nat.pdbx_ncbi_taxonomy_id 10788 _entity_src_nat.genus Parvovirus _entity_src_nat.species 'Feline panleukopenia virus' _entity_src_nat.strain D _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line 'CULTURED IN CANINE A72 CELL LINE' _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP COAT_PAVCD P17455 2 154 ? ? 2 PDB 4DPV 4DPV 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4DPV Z 1 ? 584 ? P17455 154 ? 737 ? 1 584 2 2 4DPV N 1 ? 11 ? 4DPV 1 ? 11 ? 1 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4DPV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector FILM _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 1987-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 4DPV _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F 2.000 _reflns.d_resolution_low ? _reflns.d_resolution_high 2.900 _reflns.number_obs 565088 _reflns.number_all ? _reflns.percent_possible_obs 43.000 _reflns.pdbx_Rmerge_I_obs 0.122 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 1.660 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 4DPV _refine.ls_number_reflns_obs 557776 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 2.900 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.283 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;ELEVEN NUCLEOTIDES OF THE GENOMIC SINGLE-STRANDED DNA ARE BOUND TO EACH OF THE 60 PROTOMERS OF THE CAPSID, TOGETHER CONSTITUTING 13 PERCENT OF THE GENOME. THE ELECTRON DENSITY IS THE AVERAGE OF UP TO 60 DIFFERENT REGIONS OF THE DNA SEQUENCE. THUS, THE ELECTRON DENSITY FOR EACH BASE IS EXPECTED TO BE BLURRED AS IT IS THE AVERAGE OF MANY BASES. HOWEVER, FOR MANY OF THE NUCLEOTIDES, THE ELECTRON DENSITY IS DISTINCTIVE FOR PURINE OR PYRIMIDINE, AND IN SOME CASES FOR INDIVIDUAL BASE-TYPE. THIS SHOWS THAT THERE IS SOME SEQUENCE PREFERENCE. THERE ARE 30+ REGIONS OF THE ENCAPSIDATED GENOMIC SEQUENCE THAT SATISFY THIS PREFERENCE (SEE *JRNL* REFERENCE), BUT THE HOMOLOGY BETWEEN THEM IS WEAK. THE BASE-TYPES OF THE DNA MODEL WERE CHOSEN TO FIT THE ELECTRON DENSITY AND STERIC CONSTRAINTS BEST, AND IS THEREFORE SIMILAR TO THE CONSENSUS OF THE VIRAL SEQUENCES THAT BIND. NOTE THAT THE SEQUENCE OF THE DNA IN THE GENBANK ENTRY PVCPVC IS THE NEGATIVE OF THE SEQUENCE THAT IS ENCAPSIDATED IN THE VIRION. STRONG ELECTRON DENSITY BEGINS AT THE 37TH RESIDUE OF VP2. DIFFUSE DENSITY CONNECTS GLY 37 ON THE INSIDE SURFACE TO GLY 22 ON THE OUTER SURFACE, PASSING ALONG THE FIVE-FOLD AXIS, SO THAT AT MOST ONE IN FIVE OF THE N-TERMINI ARE EXTERNAL. AN OCCUPANCY FOR RESIDUES 24 TO 34 WAS OPTIMIZED AGAINST THE ELECTRON DENSITY AND FREE R-FACTOR. 13% OF N-TERMINI ARE EXTERNAL, MEANING THAT 65% OF FIVE-FOLD PORES ARE OCCUPIED BY POLYPEPTIDES FROM ONE OF THE FIVE SURROUNDING PROTEINS. N-TERMINI FROM THE INSIDE OF THE CAPSID LIKELY JOIN AT RESIDUE 35, BUT THERE IS INADEQUATE ELECTRON DENSITY FOR MODELING OF THE ALTERNATIVE N-TERMINAL CONFORMATIONS. SEE CITATION IN *JRNL* RECORDS FOR ADDITIONAL DETAILS. REAL-SPACE R-FACTORS (CHAPMAN, MS (1995) ACTA CRYST A51:69) - A MEASURE OF LOCAL RELATIVE RELIABILITY (LOW IS GOOD). (5 BLOCKS, EACH WITH 3 COLUMNS: RESIDUE #; MAIN CHAIN R; SIDE CHAIN R). FOR DETAILS SEE *JRNL* CITATION. RESIDUE RESIDUE RESIDUE RESIDUE RESIDUE MAIN CHAIN MAIN CHAIN MAIN CHAIN MAIN CHAIN MAIN SIDE CHAIN SIDE CHAIN SIDE CHAIN SIDE CHAIN SIDE NUCLEIC ACID: PROTEIN: 1 28% 24% 125 20% 26% 240 29% 28% 355 25% 39% 470 28% 26% 2 28% 35% 126 19% 23% 241 24% 34% 356 19% 21% 471 32% 34% 3 35% 37% 127 20% 35% 242 19% 31% 357 19% 27% 472 28% 32% 4 24% 26% 128 21% 37% 243 17% 25% 358 18% 473 23% 29% 5 20% 25% 129 18% 23% 244 19% 28% 359 18% 474 23% 36% 6 23% 29% 130 21% 34% 245 22% 25% 360 16% 475 19% 23% 7 34% 33% 131 24% 37% 246 23% 38% 361 19% 26% 476 23% 31% 8 24% 38% 132 22% 27% 247 20% 21% 362 24% 477 21% 23% 9 31% 32% 133 22% 33% 248 24% 32% 363 25% 478 22% 35% 10 28% 36% 134 21% 24% 249 25% 34% 364 25% 479 23% 42% 11 28% 35% 135 22% 24% 250 23% 31% 365 26% 32% 480 25% 31% PROTEIN: 136 21% 35% 251 18% 23% 366 24% 31% 481 19% 32% 22 35% 137 20% 28% 252 15% 28% 367 20% 25% 482 21% 29% 23 33% 48% 138 24% 46% 253 20% 17% 368 24% 29% 483 21% 35% 24 42% 139 25% 33% 254 24% 39% 369 21% 27% 484 18% 24% 25 49% 82% 140 27% 26% 255 29% 48% 370 25% 27% 485 26% 29% 26 28% 141 26% 32% 256 30% 39% 371 28% 486 30% 27 22% 50% 142 24% 29% 257 23% 25% 372 26% 487 25% 29% 28 23% 143 20% 23% 258 30% 373 20% 32% 488 28% 33% 29 25% 144 22% 36% 259 30% 36% 374 23% 489 29% 43% 30 34% 145 18% 27% 260 25% 32% 375 27% 31% 490 32% 45% 31 47% 146 22% 35% 261 24% 28% 376 29% 32% 491 26% 38% 32 69% 147 25% 40% 262 30% 377 26% 35% 492 24% 33% 33 73% 148 25% 44% 263 23% 36% 378 26% 33% 493 31% 50% 34 53% 149 20% 27% 264 27% 379 26% 494 30% 38% 35 51% 58% 150 22% 35% 265 23% 34% 380 31% 40% 495 27% 34% 36 54% 151 25% 36% 266 27% 43% 381 31% 496 28% 37 35% 152 25% 34% 267 27% 34% 382 26% 36% 497 25% 40% 38 24% 31% 153 24% 41% 268 25% 44% 383 26% 33% 498 20% 19% 39 27% 154 23% 32% 269 26% 38% 384 32% 40% 499 19% 34% 40 29% 49% 155 24% 24% 270 22% 39% 385 28% 500 18% 19% 41 27% 45% 156 271 19% 38% 386 29% 53% 501 21% 31% 42 28% 39% 157 272 20% 22% 387 27% 38% 502 20% 34% 43 25% 158 273 20% 34% 388 23% 32% 503 20% 44 19% 18% 159 274 26% 34% 389 23% 39% 504 17% 21% 45 23% 34% 160 25% 27% 275 27% 37% 390 27% 35% 505 20% 35% 46 27% 29% 161 29% 28% 276 33% 38% 391 23% 27% 506 23% 35% 47 30% 41% 162 27% 32% 277 37% 38% 392 22% 507 20% 26% 48 26% 34% 163 24% 28% 278 30% 45% 393 22% 34% 508 22% 22% 49 21% 34% 164 25% 35% 279 27% 30% 394 24% 33% 509 21% 25% 50 20% 30% 165 24% 30% 280 25% 41% 395 31% 30% 510 23% 34% 51 21% 28% 166 22% 25% 281 22% 32% 396 32% 23% 511 23% 25% 52 22% 36% 167 23% 28% 282 24% 30% 397 25% 32% 512 25% 30% 53 23% 30% 168 19% 30% 283 28% 38% 398 27% 38% 513 22% 27% 54 24% 40% 169 20% 32% 284 28% 399 28% 42% 514 28% 55 25% 32% 170 25% 28% 285 28% 44% 400 29% 31% 515 24% 36% 56 27% 29% 171 29% 286 23% 401 24% 38% 516 21% 57 27% 172 25% 33% 287 23% 41% 402 32% 517 21% 24% 58 28% 33% 173 26% 30% 288 23% 25% 403 28% 29% 518 22% 38% 59 23% 33% 174 22% 37% 289 23% 31% 404 31% 39% 519 19% 29% 60 22% 26% 175 18% 24% 290 17% 21% 405 24% 28% 520 18% 27% 61 17% 33% 176 18% 291 18% 31% 406 18% 30% 521 20% 42% 62 20% 31% 177 22% 40% 292 14% 24% 407 19% 522 21% 28% 63 28% 178 25% 30% 293 18% 24% 408 21% 32% 523 19% 28% 64 32% 43% 179 34% 49% 294 21% 39% 409 24% 28% 524 21% 30% 65 35% 43% 180 32% 35% 295 22% 29% 410 26% 27% 525 19% 22% 66 30% 41% 181 28% 35% 296 15% 24% 411 23% 26% 526 20% 25% 67 22% 34% 182 25% 39% 297 20% 31% 412 24% 527 21% 26% 68 20% 27% 183 23% 39% 298 24% 30% 413 25% 37% 528 22% 21% 69 21% 30% 184 20% 23% 299 25% 414 21% 19% 529 22% 24% 70 24% 30% 185 27% 41% 300 24% 415 25% 34% 530 27% 34% 71 24% 41% 186 27% 35% 301 23% 24% 416 26% 33% 531 33% 72 22% 27% 187 27% 34% 302 27% 35% 417 20% 26% 532 29% 43% 73 20% 27% 188 29% 303 23% 32% 418 19% 30% 533 23% 36% 74 22% 27% 189 29% 304 21% 419 16% 22% 534 21% 27% 75 19% 30% 190 21% 41% 305 20% 23% 420 18% 30% 535 18% 27% 76 20% 27% 191 20% 28% 306 24% 41% 421 20% 25% 536 23% 46% 77 19% 32% 192 23% 34% 307 21% 422 20% 30% 537 28% 78 22% 20% 193 23% 22% 308 21% 28% 423 21% 20% 538 27% 41% 79 22% 27% 194 22% 33% 309 22% 30% 424 30% 43% 539 21% 37% 80 28% 40% 195 24% 38% 310 22% 32% 425 31% 40% 540 19% 29% 81 22% 22% 196 27% 311 20% 25% 426 30% 30% 541 21% 82 25% 37% 197 25% 39% 312 24% 38% 427 28% 30% 542 23% 29% 83 21% 28% 198 21% 30% 313 22% 35% 428 34% 33% 543 21% 26% 84 26% 39% 199 22% 23% 314 20% 27% 429 38% 51% 544 20% 28% 85 22% 29% 200 18% 23% 315 22% 430 34% 44% 545 20% 23% 86 22% 36% 201 20% 38% 316 22% 32% 431 28% 39% 546 23% 28% 87 26% 35% 202 17% 19% 317 23% 31% 432 25% 27% 547 25% 26% 88 23% 20% 203 19% 23% 318 20% 29% 433 19% 21% 548 27% 43% 89 27% 35% 204 21% 30% 319 25% 38% 434 25% 32% 549 26% 31% 90 28% 42% 205 20% 23% 320 21% 435 22% 20% 550 24% 35% 91 31% 206 22% 27% 321 22% 29% 436 19% 26% 551 25% 41% 92 28% 36% 207 21% 20% 322 21% 32% 437 19% 552 24% 22% 93 29% 46% 208 30% 33% 323 20% 24% 438 19% 553 24% 35% 94 29% 209 25% 22% 324 25% 28% 439 27% 38% 554 20% 23% 95 21% 28% 210 20% 25% 325 22% 33% 440 27% 27% 555 21% 27% 96 16% 33% 211 19% 29% 326 19% 28% 441 29% 556 21% 20% 97 13% 212 25% 31% 327 27% 37% 442 32% 41% 557 22% 28% 98 20% 34% 213 28% 39% 328 25% 443 23% 28% 558 25% 39% 99 26% 33% 214 29% 31% 329 24% 39% 444 16% 31% 559 18% 24% 100 27% 29% 215 34% 50% 330 24% 30% 445 23% 32% 560 21% 28% 101 25% 40% 216 34% 37% 331 22% 27% 446 24% 37% 561 22% 33% 102 25% 34% 217 25% 27% 332 21% 35% 447 19% 23% 562 24% 35% 103 32% 218 23% 39% 333 19% 23% 448 20% 39% 563 24% 26% 104 24% 28% 219 25% 27% 334 23% 449 21% 22% 564 25% 31% 105 24% 36% 220 22% 24% 335 24% 37% 450 24% 37% 565 27% 36% 106 26% 36% 221 34% 46% 336 24% 32% 451 26% 30% 566 28% 41% 107 29% 37% 222 31% 30% 337 25% 452 20% 567 29% 108 25% 29% 223 27% 36% 338 25% 20% 453 19% 18% 568 30% 109 28% 24% 224 27% 339 27% 38% 454 20% 29% 569 24% 27% 110 27% 36% 225 28% 39% 340 27% 455 22% 34% 570 22% 25% 111 29% 38% 226 21% 29% 341 26% 25% 456 21% 571 23% 39% 112 19% 22% 227 23% 342 24% 35% 457 20% 25% 572 18% 28% 113 18% 26% 228 20% 32% 343 21% 30% 458 20% 35% 573 22% 27% 114 18% 229 24% 33% 344 27% 36% 459 17% 25% 574 20% 28% 115 24% 29% 230 21% 22% 345 27% 30% 460 22% 36% 575 25% 31% 116 25% 231 26% 40% 346 31% 32% 461 22% 28% 576 28% 28% 117 24% 24% 232 25% 32% 347 31% 462 18% 24% 577 28% 49% 118 29% 233 16% 23% 348 23% 23% 463 21% 35% 578 24% 43% 119 27% 39% 234 19% 33% 349 30% 49% 464 22% 30% 579 31% 120 23% 29% 235 20% 350 32% 51% 465 28% 30% 580 29% 29% 121 27% 33% 236 24% 34% 351 29% 466 20% 33% 581 24% 41% 122 25% 25% 237 31% 26% 352 25% 24% 467 25% 582 21% 33% 123 25% 30% 238 28% 29% 353 27% 36% 468 28% 40% 583 24% 39% 124 22% 239 26% 22% 354 25% 35% 469 25% 29% 584 23% 28% ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4390 _refine_hist.pdbx_number_atoms_nucleic_acid 212 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 4606 _refine_hist.d_res_high 2.900 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.018 ? ? ? 'X-RAY DIFFRACTION' ? t_angle_deg 2.700 ? ? ? 'X-RAY DIFFRACTION' ? t_dihedral_angle_d 15.40 ? ? ? 'X-RAY DIFFRACTION' ? t_incorr_chiral_ct 0 ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes 0.016 ? ? ? 'X-RAY DIFFRACTION' ? t_gen_planes 0.024 ? ? ? 'X-RAY DIFFRACTION' ? t_it ? ? ? ? 'X-RAY DIFFRACTION' ? t_nbd 0.110 ? ? 166 'X-RAY DIFFRACTION' ? # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000 0.00000 0.00000 2 generate ? 0.42068488 0.85725203 -0.29687292 -0.88228120 0.31042008 -0.35387133 -0.21120183 0.41079762 0.88692902 -57.82013 -81.56334 -21.39948 3 generate ? -0.51666147 0.50478652 -0.69155208 -0.57030188 -0.80534622 -0.16178213 -0.63860948 0.31081497 0.70397370 -145.71159 -48.29596 -61.67362 4 generate ? -0.51665825 -0.57030117 -0.63860429 0.50479313 -0.80534780 0.31080687 -0.69156009 -0.16177534 0.70397206 -142.21138 53.82775 -65.16492 5 generate ? 0.42069009 -0.88227640 -0.21120160 0.85725908 0.31041752 0.41079372 -0.29687772 -0.35386955 0.88692637 -52.15666 83.67629 -27.04852 6 generate ? 0.35568263 -0.05656871 -0.93289172 -0.05656156 -0.99763985 0.03892195 -0.93289526 0.03892701 -0.35804277 -104.14861 -1.15642 -151.27912 7 generate ? 0.39656825 -0.09588011 -0.91298324 0.84818390 -0.34218591 0.40434874 -0.35118021 -0.93472574 -0.05438234 -100.13689 82.65191 -92.85208 8 generate ? 0.44424723 -0.06485553 -0.89355249 0.57332314 0.78699149 0.22791560 0.68844039 -0.61354772 0.38679526 -95.70884 52.86678 4.85631 9 generate ? 0.43282882 -0.00636986 -0.90145210 -0.50129561 0.82940757 -0.24655290 0.74924621 0.55860396 0.35579759 -96.98388 -49.34977 6.81638 10 generate ? 0.37809289 -0.00124833 -0.92576508 -0.89058577 -0.27355525 -0.36335739 -0.25279433 0.96185553 -0.10453763 -102.19994 -82.73794 -89.68062 11 generate ? -0.35593434 0.03415219 0.93388505 0.03415087 -0.99818912 0.04951822 0.93388841 0.04952032 0.35412345 -27.66827 5.52497 18.87972 12 generate ? -0.37710627 0.08911386 0.92187154 0.88459191 -0.26024008 0.38701119 0.27439036 0.96142291 0.01931236 -29.85832 83.90633 -46.73493 13 generate ? -0.43196735 0.08309026 0.89805243 0.52000189 0.83651773 0.17273158 -0.73689228 0.54160014 -0.40455038 -35.04999 45.70333 -141.43035 14 generate ? -0.44470143 0.02440580 0.89534492 -0.55576816 0.77640230 -0.29719348 -0.70240128 -0.62976718 -0.33170088 -36.06856 -56.28880 -134.34069 15 generate ? -0.39771044 -0.00583958 0.91749069 -0.85604061 -0.35750889 -0.37334352 0.33019798 -0.93388923 0.13718534 -31.50640 -81.12039 -35.26362 16 generate ? -0.99974830 0.02241651 -0.00099333 0.02241069 0.99582897 -0.08844017 -0.00099315 -0.08844734 -0.99608068 -131.91501 -4.36855 -132.01220 17 generate ? -0.44014687 -0.85048577 0.28798462 -0.85049461 0.29200591 -0.43748860 0.28799168 -0.43749479 -0.85185904 -75.91654 -84.99490 -103.42511 18 generate ? 0.50438159 -0.52302125 0.68705214 -0.52302314 -0.81816301 -0.23886505 0.68706137 -0.23886739 -0.68621858 12.73855 -50.27414 -66.16394 19 generate ? 0.52853085 0.55226523 0.64471148 0.55227065 -0.80046207 0.23293951 0.64471516 0.23293855 -0.72806878 11.53194 51.81082 -71.72237 20 generate ? -0.40107254 0.88936431 0.21947599 0.88936730 0.32064662 0.32590719 0.21947407 0.32590325 -0.91957408 -77.86887 80.18204 -112.41884 21 generate ? -0.47008306 0.54249723 -0.69621191 -0.80262572 0.06541085 0.59289270 0.36718292 0.83750606 0.40467221 -142.94857 -13.72757 -15.14343 22 generate ? -0.52935070 -0.52057982 -0.66990983 -0.52058329 -0.42418877 0.74098456 -0.66991505 0.74098538 -0.04646052 -145.11762 14.65763 -113.34356 23 generate ? 0.37809413 -0.89058276 -0.25279432 -0.00124505 -0.27355309 0.96185605 -0.92576805 -0.36335516 -0.10454104 -57.71454 63.49938 -134.05200 24 generate ? 0.99819353 -0.05618011 -0.02130482 0.03768121 0.30914449 0.95027027 -0.04679593 -0.94935449 0.31069597 -1.52742 65.30005 -48.65039 25 generate ? 0.47399120 0.82951202 -0.29535196 -0.45759928 0.51863573 0.72223837 0.75229172 -0.20718145 0.62540706 -54.20494 17.57117 24.83915 26 generate ? 0.45160793 -0.54172632 0.70892528 -0.84228655 0.00322657 0.53902786 -0.29428685 -0.84054780 -0.45483450 10.70490 -19.90315 -115.57199 27 generate ? 0.51821325 0.51020390 0.68639765 -0.47102763 -0.49961889 0.72698972 0.71385937 -0.70004584 -0.01859435 13.60724 16.99988 -20.26517 28 generate ? -0.37710728 0.88458742 0.27439599 0.08910858 -0.26023547 0.96142445 0.92187428 0.38701059 0.01930877 -72.65840 69.42814 -4.04463 29 generate ? -0.99705111 0.06403894 0.04229258 0.06403289 0.39055707 0.91835120 0.04228836 0.91834646 -0.39350596 -128.87585 64.92756 -89.32659 30 generate ? -0.48487695 -0.81747142 0.31084645 -0.51160096 0.55338558 0.65729574 -0.70934056 0.15967365 -0.68654261 -77.35450 9.71778 -158.25429 31 generate ? -0.46433879 -0.59204584 -0.65868500 0.84161151 -0.06334359 -0.53636392 0.27582724 -0.80340983 0.52768237 -140.08919 20.03474 -13.03546 32 generate ? 0.46612608 -0.85242451 -0.23684919 0.52322114 0.48147303 -0.70315291 0.71342225 0.20382958 0.67043488 -50.85631 -11.98292 25.25284 33 generate ? 0.99819330 0.03768075 -0.04680003 -0.05617618 0.30913772 -0.94935642 -0.02130613 0.95026852 0.31070297 -3.21274 -66.45908 -46.96931 34 generate ? 0.39656405 0.84817475 -0.35117901 -0.09587305 -0.34218795 -0.93472956 -0.91298824 0.40435375 -0.05437610 -63.00028 -68.10953 -129.89334 35 generate ? -0.50733049 0.45898232 -0.72934472 0.45899025 -0.57239407 -0.67948615 -0.72934973 -0.67947907 0.07972455 -147.59458 -14.65341 -108.92107 36 generate ? 0.48281392 0.59127492 0.64597163 0.80330076 -0.00529383 -0.59555664 -0.34872331 0.80645157 -0.47752008 8.60098 13.59598 -120.66073 37 generate ? -0.45498862 0.86280043 0.22036137 0.46838979 0.44233464 -0.76482137 -0.75736657 -0.24476912 -0.60538000 -81.36520 -19.67458 -156.05570 38 generate ? -0.99918015 -0.03168541 0.02519836 -0.03168735 0.22465084 -0.97392407 0.02519990 -0.97392394 -0.22547070 -130.14620 -66.46845 -79.34566 39 generate ? -0.39770647 -0.85603358 0.33019125 -0.00584105 -0.35751361 -0.93389190 0.91749581 -0.37334571 0.13718610 -70.32834 -62.11808 3.45872 40 generate ? 0.51821623 -0.47102292 0.71385023 0.51020998 -0.49962724 -0.70004796 0.68639856 0.72698686 -0.01858899 15.42214 -12.63554 -22.07539 41 generate ? -0.47008127 -0.80261524 0.36718245 0.54250040 0.06540758 0.83750639 -0.69622165 0.59289312 0.40467370 -72.65500 91.13026 -85.25676 42 generate ? 0.43282664 -0.50128833 0.74924170 -0.00636905 0.82940903 0.55860918 -0.90145620 -0.24655249 0.35579832 12.13163 36.50576 -102.01928 43 generate ? 0.46611967 0.52321826 0.71342128 -0.85243064 0.48148066 0.20383342 -0.23684563 -0.70314889 0.67043365 11.95890 -42.72930 -37.40123 44 generate ? -0.41621202 0.85507125 0.30922378 -0.82645600 -0.49755234 0.26346715 0.37914085 -0.14589538 0.91376436 -72.93448 -37.07476 19.29746 45 generate ? -0.99481603 0.03566109 0.09523642 0.03565879 -0.75469965 0.65509858 0.09523086 0.65510264 0.74951567 -125.22874 45.65501 -10.27889 46 generate ? -0.46434534 0.84160616 0.27582855 -0.59204734 -0.06334013 -0.80341145 -0.65868707 -0.53635671 0.52768547 -78.31557 -92.14327 -74.65055 47 generate ? -0.99613185 -0.02349982 0.08467162 -0.02349959 -0.85723534 -0.51439185 0.08466961 -0.51438478 0.85336717 -126.01386 -35.55219 -4.11034 48 generate ? -0.41620696 -0.82644796 0.37913820 0.85507720 -0.49755908 -0.14590166 0.30921853 0.26346904 0.91376604 -68.31260 46.73326 14.68738 49 generate ? 0.47399284 -0.45759123 0.75228550 0.82951977 0.51862828 -0.20718179 -0.29535928 0.72223721 0.62541287 15.04704 40.99738 -44.23521 50 generate ? 0.44424168 0.57332291 0.68843662 -0.06485238 0.78699035 -0.61354518 -0.89355784 0.22791772 0.38680196 8.86486 -44.83303 -99.44909 51 generate ? 0.48281550 0.80329049 -0.34871803 0.59127673 -0.00528797 0.80645253 0.64597708 -0.59555739 -0.47752753 -57.15078 92.29348 -55.07767 52 generate ? -0.43196502 0.51999952 -0.73688446 0.08308240 0.83652046 0.54160336 0.89805656 0.17272501 -0.40455544 -143.12391 41.27942 -33.63365 53 generate ? -0.48487560 -0.51159499 -0.70933843 -0.81748239 0.55338468 0.15967822 0.31084964 0.65728770 -0.68654306 -144.79159 -43.34385 -90.99015 54 generate ? 0.39720438 -0.86586449 -0.30414760 -0.86586771 -0.46341129 0.18848466 -0.30414368 0.18848153 -0.93379310 -59.84914 -44.62985 -147.88243 55 generate ? 0.99527037 -0.05322058 -0.08127194 0.00479331 -0.80868997 0.58821316 -0.09702354 -0.58581932 -0.80461438 -5.68415 39.19863 -125.68729 56 generate ? 0.45161112 -0.84228140 -0.29429298 -0.54172979 0.00322052 -0.84054748 0.70893164 0.53902097 -0.45483164 -55.61053 -91.28048 -49.42662 57 generate ? 0.99527023 0.00478863 -0.09702885 -0.05321377 -0.80869415 -0.58582070 -0.08126997 0.58821226 -0.80461005 -6.72574 -42.23299 -124.64833 58 generate ? 0.43496289 0.81482468 -0.38322104 0.81483582 -0.53730626 -0.21760998 -0.38322254 -0.21760785 -0.89765662 -62.58660 39.33989 -150.70761 59 generate ? -0.45498520 0.46838447 -0.75736167 0.86280395 0.44233535 -0.24477002 0.22036211 -0.76482335 -0.60538413 -145.99530 40.70722 -91.59142 60 generate ? -0.44469603 -0.55576341 -0.70240110 0.02440029 0.77639927 -0.62976656 0.89535052 -0.29720103 -0.33170324 -141.68385 -40.02061 -28.99633 # _struct.entry_id 4DPV _struct.title 'PARVOVIRUS/DNA COMPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DPV _struct_keywords.pdbx_keywords Virus/DNA _struct_keywords.text 'COMPLEX (VIRUS-DNA), FULL CAPSID, SINGLE-STRANDED DNA, VIRUS, Icosahedral virus, Virus-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 BC2 ASN B 86 ? THR B 90 ? ASN Z 86 THR Z 90 1 ? 5 HELX_P HELX_P2 CD1 ALA B 116 ? PHE B 121 ? ALA Z 116 PHE Z 121 1 ? 6 HELX_P HELX_P3 CD2 ASN B 122 ? MET B 133 ? ASN Z 122 MET Z 133 1 ? 12 HELX_P HELX_P4 EF1 PRO B 187 ? SER B 192 ? PRO Z 187 SER Z 192 5 ? 6 HELX_P HELX_P5 EF6 THR B 245 ? VAL B 250 ? THR Z 245 VAL Z 250 1 ? 6 HELX_P HELX_P6 GH5 GLY B 381 ? GLY B 385 ? GLY Z 381 GLY Z 385 5 ? 5 HELX_P HELX_P7 GH7 TYR B 409 ? ASP B 413 ? TYR Z 409 ASP Z 413 5 ? 5 HELX_P HELX_P8 G10 ASN B 443 ? ILE B 447 ? ASN Z 443 ILE Z 447 5 ? 5 HELX_P HELX_P9 I2 ASN B 557 ? VAL B 562 ? ASN Z 557 VAL Z 562 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? B CYS 490 SG ? ? ? 1_555 B CYS 494 SG ? ? Z CYS 490 Z CYS 494 1_555 ? ? ? ? ? ? ? 2.092 ? ? metalc1 metalc ? ? A DA 3 OP1 ? ? ? 1_555 D MG . MG ? ? N DA 3 N MG 13 1_555 ? ? ? ? ? ? ? 2.598 ? ? metalc2 metalc ? ? A DC 4 OP1 ? ? ? 1_555 C MG . MG ? ? N DC 4 N MG 12 1_555 ? ? ? ? ? ? ? 2.011 ? ? metalc3 metalc ? ? A DT 6 OP1 ? ? ? 1_555 C MG . MG ? ? N DT 6 N MG 12 1_555 ? ? ? ? ? ? ? 2.262 ? ? metalc4 metalc ? ? A DC 7 OP2 ? ? ? 1_555 C MG . MG ? ? N DC 7 N MG 12 1_555 ? ? ? ? ? ? ? 2.417 ? ? metalc5 metalc ? ? A DT 9 OP2 ? ? ? 1_555 C MG . MG ? ? N DT 9 N MG 12 1_555 ? ? ? ? ? ? ? 2.194 ? ? metalc6 metalc ? ? A DT 9 OP1 ? ? ? 1_555 D MG . MG ? ? N DT 9 N MG 13 1_555 ? ? ? ? ? ? ? 2.199 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 B ASN 180 OD1 ? ? N MG 12 Z ASN 180 1_555 ? ? ? ? ? ? ? 2.098 ? ? metalc8 metalc ? ? B ASP 237 OD2 ? ? ? 1_555 E MG . MG ? ? Z ASP 237 Z MG 585 1_555 ? ? ? ? ? ? ? 2.120 ? ? metalc9 metalc ? ? B ASP 237 OD2 ? ? ? 1_555 F MG . MG ? ? Z ASP 237 Z MG 586 1_555 ? ? ? ? ? ? ? 3.021 ? ? metalc10 metalc ? ? B ASP 237 OD1 ? ? ? 1_555 F MG . MG ? ? Z ASP 237 Z MG 586 1_555 ? ? ? ? ? ? ? 2.410 ? ? metalc11 metalc ? ? B ASP 239 OD2 ? ? ? 1_555 F MG . MG ? ? Z ASP 239 Z MG 586 1_555 ? ? ? ? ? ? ? 1.771 ? ? metalc12 metalc ? ? B ASP 240 OD2 ? ? ? 1_555 E MG . MG ? ? Z ASP 240 Z MG 585 1_555 ? ? ? ? ? ? ? 1.550 ? ? metalc13 metalc ? ? B ASP 240 OD1 ? ? ? 1_555 E MG . MG ? ? Z ASP 240 Z MG 585 1_555 ? ? ? ? ? ? ? 3.125 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 342 B . ? TYR 342 Z TYR 343 B ? TYR 343 Z 1 -5.85 2 LEU 422 B . ? LEU 422 Z PRO 423 B ? PRO 423 Z 1 -0.51 3 TYR 464 B . ? TYR 464 Z PRO 465 B ? PRO 465 Z 1 0.96 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details BDG ? 5 ? BID ? 5 ? BIG ? 5 ? CHF ? 5 ? BCE ? 3 ? EF ? 2 ? GH1 ? 2 ? GH2 ? 2 ? GH3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense BDG 1 2 ? anti-parallel BDG 2 3 ? anti-parallel BDG 3 4 ? anti-parallel BDG 4 5 ? anti-parallel BID 1 2 ? anti-parallel BID 2 3 ? anti-parallel BID 3 4 ? anti-parallel BID 4 5 ? anti-parallel BIG 1 2 ? anti-parallel BIG 2 3 ? anti-parallel BIG 3 4 ? anti-parallel BIG 4 5 ? anti-parallel CHF 1 2 ? anti-parallel CHF 2 3 ? anti-parallel CHF 3 4 ? anti-parallel CHF 4 5 ? anti-parallel BCE 1 2 ? anti-parallel BCE 2 3 ? anti-parallel EF 1 2 ? anti-parallel GH1 1 2 ? anti-parallel GH2 1 2 ? anti-parallel GH3 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id BDG 1 GLN B 48 ? LEU B 54 ? GLN Z 48 LEU Z 54 BDG 2 GLY B 57 ? MET B 73 ? GLY Z 57 MET Z 73 BDG 3 VAL B 522 ? ARG B 540 ? VAL Z 522 ARG Z 540 BDG 4 THR B 132 ? LEU B 150 ? THR Z 132 LEU Z 150 BDG 5 PHE B 261 ? PHE B 268 ? PHE Z 261 PHE Z 268 BID 1 GLN B 48 ? LEU B 54 ? GLN Z 48 LEU Z 54 BID 2 GLY B 57 ? MET B 73 ? GLY Z 57 MET Z 73 BID 3 VAL B 522 ? ARG B 540 ? VAL Z 522 ARG Z 540 BID 4 THR B 132 ? LEU B 150 ? THR Z 132 LEU Z 150 BID 5 CYS B 273 ? LEU B 275 ? CYS Z 273 LEU Z 275 BIG 1 GLN B 48 ? LEU B 54 ? GLN Z 48 LEU Z 54 BIG 2 GLY B 57 ? MET B 73 ? GLY Z 57 MET Z 73 BIG 3 VAL B 522 ? ARG B 540 ? VAL Z 522 ARG Z 540 BIG 4 THR B 132 ? SER B 154 ? THR Z 132 SER Z 154 BIG 5 VAL B 164 ? ASP B 168 ? VAL Z 164 ASP Z 168 CHF 1 THR B 206 ? TRP B 208 ? THR Z 206 TRP Z 208 CHF 2 TRP B 109 ? VAL B 112 ? TRP Z 109 VAL Z 112 CHF 3 GLN B 497 ? ALA B 503 ? GLN Z 497 ALA Z 503 CHF 4 SER B 172 ? ASP B 178 ? SER Z 172 ASP Z 178 CHF 5 PRO B 251 ? LEU B 255 ? PRO Z 251 LEU Z 255 BCE 1 ARG B 80 ? VAL B 84 ? ARG Z 80 VAL Z 84 BCE 2 HIS B 102 ? THR B 107 ? HIS Z 102 THR Z 107 BCE 3 TRP B 208 ? PHE B 212 ? TRP Z 208 PHE Z 212 EF 1 ASP B 215 ? ILE B 219 ? ASP Z 215 ILE Z 219 EF 2 THR B 230 ? HIS B 234 ? THR Z 230 HIS Z 234 GH1 1 GLY B 351 ? THR B 355 ? GLY Z 351 THR Z 355 GH1 2 TYR B 343 ? SER B 348 ? TYR Z 343 SER Z 348 GH2 1 GLU B 396 ? TYR B 400 ? GLU Z 396 TYR Z 400 GH2 2 PRO B 376 ? PHE B 380 ? PRO Z 376 PHE Z 380 GH3 1 ILE B 469 ? ASP B 471 ? ILE Z 469 ASP Z 471 GH3 2 PHE B 488 ? CYS B 490 ? PHE Z 488 CYS Z 490 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id BDG 1 2 O LYS B 52 ? O LYS Z 52 N GLU B 60 ? N GLU Z 60 BDG 2 3 O LEU B 71 ? O LEU Z 71 N SER B 525 ? N SER Z 525 BDG 3 4 N LYS B 530 ? N LYS Z 530 O GLU B 144 ? O GLU Z 144 BDG 4 5 O ILE B 145 ? O ILE Z 145 N PHE B 261 ? N PHE Z 261 BID 1 2 O LYS B 52 ? O LYS Z 52 N GLU B 60 ? N GLU Z 60 BID 2 3 O LEU B 71 ? O LEU Z 71 N SER B 525 ? N SER Z 525 BID 3 4 N LYS B 530 ? N LYS Z 530 O GLU B 144 ? O GLU Z 144 BID 4 5 O LEU B 136 ? O LEU Z 136 N CYS B 273 ? N CYS Z 273 BIG 1 2 O LYS B 52 ? O LYS Z 52 N GLU B 60 ? N GLU Z 60 BIG 2 3 O LEU B 71 ? O LEU Z 71 N SER B 525 ? N SER Z 525 BIG 3 4 N LYS B 530 ? N LYS Z 530 O GLU B 144 ? O GLU Z 144 BIG 4 5 O SER B 154 ? O SER Z 154 N VAL B 164 ? N VAL Z 164 CHF 1 2 O THR B 206 ? O THR Z 206 N LEU B 111 ? N LEU Z 111 CHF 2 3 O VAL B 112 ? O VAL Z 112 N LEU B 498 ? N LEU Z 498 CHF 3 4 O LYS B 501 ? O LYS Z 501 N MET B 174 ? N MET Z 174 CHF 4 5 O VAL B 175 ? O VAL Z 175 N HIS B 253 ? N HIS Z 253 BCE 1 2 O VAL B 82 ? O VAL Z 82 N GLN B 104 ? N GLN Z 104 BCE 2 3 O ILE B 105 ? O ILE Z 105 N TYR B 210 ? N TYR Z 210 EF 1 2 O ASP B 215 ? O ASP Z 215 N HIS B 234 ? N HIS Z 234 GH1 1 2 O GLY B 351 ? O GLY Z 351 N SER B 348 ? N SER Z 348 GH2 1 2 O GLU B 396 ? O GLU Z 396 N PHE B 380 ? N PHE Z 380 GH3 1 2 O ASP B 471 ? O ASP Z 471 N CYS B 490 ? N CYS Z 490 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software N MG 12 ? 5 'BINDING SITE FOR RESIDUE MG N 12' AC2 Software N MG 13 ? 2 'BINDING SITE FOR RESIDUE MG N 13' AC3 Software Z MG 585 ? 2 'BINDING SITE FOR RESIDUE MG Z 585' AC4 Software Z MG 586 ? 2 'BINDING SITE FOR RESIDUE MG Z 586' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 DC A 4 ? DC N 4 . ? 1_555 ? 2 AC1 5 DT A 6 ? DT N 6 . ? 1_555 ? 3 AC1 5 DC A 7 ? DC N 7 . ? 1_555 ? 4 AC1 5 DT A 9 ? DT N 9 . ? 1_555 ? 5 AC1 5 ASN B 180 ? ASN Z 180 . ? 1_555 ? 6 AC2 2 DA A 3 ? DA N 3 . ? 1_555 ? 7 AC2 2 DT A 9 ? DT N 9 . ? 1_555 ? 8 AC3 2 ASP B 237 ? ASP Z 237 . ? 1_555 ? 9 AC3 2 ASP B 240 ? ASP Z 240 . ? 1_555 ? 10 AC4 2 ASP B 237 ? ASP Z 237 . ? 1_555 ? 11 AC4 2 ASP B 239 ? ASP Z 239 . ? 1_555 ? # _database_PDB_matrix.entry_id 4DPV _database_PDB_matrix.origx[1][1] -0.567479 _database_PDB_matrix.origx[1][2] -0.030091 _database_PDB_matrix.origx[1][3] -0.822835 _database_PDB_matrix.origx_vector[1] -91.807352 _database_PDB_matrix.origx[2][1] 0.011217 _database_PDB_matrix.origx[2][2] 0.998953 _database_PDB_matrix.origx[2][3] -0.044266 _database_PDB_matrix.origx_vector[2] -2.186548 _database_PDB_matrix.origx[3][1] 0.823312 _database_PDB_matrix.origx[3][2] -0.034354 _database_PDB_matrix.origx[3][3] -0.566549 _database_PDB_matrix.origx_vector[3] 16.832866 # _atom_sites.entry_id 4DPV _atom_sites.fract_transf_matrix[1][1] 0.003799 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000054 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.002865 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003741 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA UNK N . n A 1 2 DT 2 2 2 DT T N . n A 1 3 DA 3 3 3 DA A N . n A 1 4 DC 4 4 4 DC C N . n A 1 5 DC 5 5 5 DC C N . n A 1 6 DT 6 6 6 DT T N . n A 1 7 DC 7 7 7 DC C N . n A 1 8 DT 8 8 8 DT T N . n A 1 9 DT 9 9 9 DT T N . n A 1 10 DG 10 10 10 DG G N . n A 1 11 DC 11 11 11 DC C N . n B 2 1 MET 1 1 ? ? ? Z . n B 2 2 SER 2 2 ? ? ? Z . n B 2 3 ASP 3 3 ? ? ? Z . n B 2 4 GLY 4 4 ? ? ? Z . n B 2 5 ALA 5 5 ? ? ? Z . n B 2 6 VAL 6 6 ? ? ? Z . n B 2 7 GLN 7 7 ? ? ? Z . n B 2 8 PRO 8 8 ? ? ? Z . n B 2 9 ASP 9 9 ? ? ? Z . n B 2 10 GLY 10 10 ? ? ? Z . n B 2 11 GLY 11 11 ? ? ? Z . n B 2 12 GLN 12 12 ? ? ? Z . n B 2 13 PRO 13 13 ? ? ? Z . n B 2 14 ALA 14 14 ? ? ? Z . n B 2 15 VAL 15 15 ? ? ? Z . n B 2 16 ARG 16 16 ? ? ? Z . n B 2 17 ASN 17 17 ? ? ? Z . n B 2 18 GLU 18 18 ? ? ? Z . n B 2 19 ARG 19 19 ? ? ? Z . n B 2 20 ALA 20 20 ? ? ? Z . n B 2 21 THR 21 21 ? ? ? Z . n B 2 22 GLY 22 22 22 GLY GLY Z . n B 2 23 SER 23 23 23 SER SER Z . n B 2 24 GLY 24 24 24 GLY GLY Z . n B 2 25 ASN 25 25 25 ASN ASN Z . n B 2 26 GLY 26 26 26 GLY GLY Z . n B 2 27 SER 27 27 27 SER SER Z . n B 2 28 GLY 28 28 28 GLY GLY Z . n B 2 29 GLY 29 29 29 GLY GLY Z . n B 2 30 GLY 30 30 30 GLY GLY Z . n B 2 31 GLY 31 31 31 GLY GLY Z . n B 2 32 GLY 32 32 32 GLY GLY Z . n B 2 33 GLY 33 33 33 GLY GLY Z . n B 2 34 GLY 34 34 34 GLY GLY Z . n B 2 35 SER 35 35 35 SER SER Z . n B 2 36 GLY 36 36 36 GLY GLY Z . n B 2 37 GLY 37 37 37 GLY GLY Z . n B 2 38 VAL 38 38 38 VAL VAL Z . n B 2 39 GLY 39 39 39 GLY GLY Z . n B 2 40 ILE 40 40 40 ILE ILE Z . n B 2 41 SER 41 41 41 SER SER Z . n B 2 42 THR 42 42 42 THR THR Z . n B 2 43 GLY 43 43 43 GLY GLY Z . n B 2 44 THR 44 44 44 THR THR Z . n B 2 45 PHE 45 45 45 PHE PHE Z . n B 2 46 ASN 46 46 46 ASN ASN Z . n B 2 47 ASN 47 47 47 ASN ASN Z . n B 2 48 GLN 48 48 48 GLN GLN Z . n B 2 49 THR 49 49 49 THR THR Z . n B 2 50 GLU 50 50 50 GLU GLU Z . n B 2 51 PHE 51 51 51 PHE PHE Z . n B 2 52 LYS 52 52 52 LYS LYS Z . n B 2 53 PHE 53 53 53 PHE PHE Z . n B 2 54 LEU 54 54 54 LEU LEU Z . n B 2 55 GLU 55 55 55 GLU GLU Z . n B 2 56 ASN 56 56 56 ASN ASN Z . n B 2 57 GLY 57 57 57 GLY GLY Z . n B 2 58 TRP 58 58 58 TRP TRP Z . n B 2 59 VAL 59 59 59 VAL VAL Z . n B 2 60 GLU 60 60 60 GLU GLU Z . n B 2 61 ILE 61 61 61 ILE ILE Z . n B 2 62 THR 62 62 62 THR THR Z . n B 2 63 ALA 63 63 63 ALA ALA Z . n B 2 64 ASN 64 64 64 ASN ASN Z . n B 2 65 SER 65 65 65 SER SER Z . n B 2 66 SER 66 66 66 SER SER Z . n B 2 67 ARG 67 67 67 ARG ARG Z . n B 2 68 LEU 68 68 68 LEU LEU Z . n B 2 69 VAL 69 69 69 VAL VAL Z . n B 2 70 HIS 70 70 70 HIS HIS Z . n B 2 71 LEU 71 71 71 LEU LEU Z . n B 2 72 ASN 72 72 72 ASN ASN Z . n B 2 73 MET 73 73 73 MET MET Z . n B 2 74 PRO 74 74 74 PRO PRO Z . n B 2 75 GLU 75 75 75 GLU GLU Z . n B 2 76 SER 76 76 76 SER SER Z . n B 2 77 GLU 77 77 77 GLU GLU Z . n B 2 78 ASN 78 78 78 ASN ASN Z . n B 2 79 TYR 79 79 79 TYR TYR Z . n B 2 80 ARG 80 80 80 ARG ARG Z . n B 2 81 ARG 81 81 81 ARG ARG Z . n B 2 82 VAL 82 82 82 VAL VAL Z . n B 2 83 VAL 83 83 83 VAL VAL Z . n B 2 84 VAL 84 84 84 VAL VAL Z . n B 2 85 ASN 85 85 85 ASN ASN Z . n B 2 86 ASN 86 86 86 ASN ASN Z . n B 2 87 MET 87 87 87 MET MET Z . n B 2 88 ASP 88 88 88 ASP ASP Z . n B 2 89 LYS 89 89 89 LYS LYS Z . n B 2 90 THR 90 90 90 THR THR Z . n B 2 91 ALA 91 91 91 ALA ALA Z . n B 2 92 VAL 92 92 92 VAL VAL Z . n B 2 93 ASN 93 93 93 ASN ASN Z . n B 2 94 GLY 94 94 94 GLY GLY Z . n B 2 95 ASN 95 95 95 ASN ASN Z . n B 2 96 MET 96 96 96 MET MET Z . n B 2 97 ALA 97 97 97 ALA ALA Z . n B 2 98 LEU 98 98 98 LEU LEU Z . n B 2 99 ASP 99 99 99 ASP ASP Z . n B 2 100 ASP 100 100 100 ASP ASP Z . n B 2 101 ILE 101 101 101 ILE ILE Z . n B 2 102 HIS 102 102 102 HIS HIS Z . n B 2 103 ALA 103 103 103 ALA ALA Z . n B 2 104 GLN 104 104 104 GLN GLN Z . n B 2 105 ILE 105 105 105 ILE ILE Z . n B 2 106 VAL 106 106 106 VAL VAL Z . n B 2 107 THR 107 107 107 THR THR Z . n B 2 108 PRO 108 108 108 PRO PRO Z . n B 2 109 TRP 109 109 109 TRP TRP Z . n B 2 110 SER 110 110 110 SER SER Z . n B 2 111 LEU 111 111 111 LEU LEU Z . n B 2 112 VAL 112 112 112 VAL VAL Z . n B 2 113 ASP 113 113 113 ASP ASP Z . n B 2 114 ALA 114 114 114 ALA ALA Z . n B 2 115 ASN 115 115 115 ASN ASN Z . n B 2 116 ALA 116 116 116 ALA ALA Z . n B 2 117 TRP 117 117 117 TRP TRP Z . n B 2 118 GLY 118 118 118 GLY GLY Z . n B 2 119 VAL 119 119 119 VAL VAL Z . n B 2 120 TRP 120 120 120 TRP TRP Z . n B 2 121 PHE 121 121 121 PHE PHE Z . n B 2 122 ASN 122 122 122 ASN ASN Z . n B 2 123 PRO 123 123 123 PRO PRO Z . n B 2 124 GLY 124 124 124 GLY GLY Z . n B 2 125 ASP 125 125 125 ASP ASP Z . n B 2 126 TRP 126 126 126 TRP TRP Z . n B 2 127 GLN 127 127 127 GLN GLN Z . n B 2 128 LEU 128 128 128 LEU LEU Z . n B 2 129 ILE 129 129 129 ILE ILE Z . n B 2 130 VAL 130 130 130 VAL VAL Z . n B 2 131 ASN 131 131 131 ASN ASN Z . n B 2 132 THR 132 132 132 THR THR Z . n B 2 133 MET 133 133 133 MET MET Z . n B 2 134 SER 134 134 134 SER SER Z . n B 2 135 GLU 135 135 135 GLU GLU Z . n B 2 136 LEU 136 136 136 LEU LEU Z . n B 2 137 HIS 137 137 137 HIS HIS Z . n B 2 138 LEU 138 138 138 LEU LEU Z . n B 2 139 VAL 139 139 139 VAL VAL Z . n B 2 140 SER 140 140 140 SER SER Z . n B 2 141 PHE 141 141 141 PHE PHE Z . n B 2 142 GLU 142 142 142 GLU GLU Z . n B 2 143 GLN 143 143 143 GLN GLN Z . n B 2 144 GLU 144 144 144 GLU GLU Z . n B 2 145 ILE 145 145 145 ILE ILE Z . n B 2 146 PHE 146 146 146 PHE PHE Z . n B 2 147 ASN 147 147 147 ASN ASN Z . n B 2 148 VAL 148 148 148 VAL VAL Z . n B 2 149 VAL 149 149 149 VAL VAL Z . n B 2 150 LEU 150 150 150 LEU LEU Z . n B 2 151 LYS 151 151 151 LYS LYS Z . n B 2 152 THR 152 152 152 THR THR Z . n B 2 153 VAL 153 153 153 VAL VAL Z . n B 2 154 SER 154 154 154 SER SER Z . n B 2 155 GLU 155 155 155 GLU GLU Z . n B 2 156 SER 156 156 ? ? ? Z . n B 2 157 ALA 157 157 ? ? ? Z . n B 2 158 THR 158 158 ? ? ? Z . n B 2 159 GLN 159 159 ? ? ? Z . n B 2 160 PRO 160 160 160 PRO PRO Z . n B 2 161 PRO 161 161 161 PRO PRO Z . n B 2 162 THR 162 162 162 THR THR Z . n B 2 163 LYS 163 163 163 LYS LYS Z . n B 2 164 VAL 164 164 164 VAL VAL Z . n B 2 165 TYR 165 165 165 TYR TYR Z . n B 2 166 ASN 166 166 166 ASN ASN Z . n B 2 167 ASN 167 167 167 ASN ASN Z . n B 2 168 ASP 168 168 168 ASP ASP Z . n B 2 169 LEU 169 169 169 LEU LEU Z . n B 2 170 THR 170 170 170 THR THR Z . n B 2 171 ALA 171 171 171 ALA ALA Z . n B 2 172 SER 172 172 172 SER SER Z . n B 2 173 LEU 173 173 173 LEU LEU Z . n B 2 174 MET 174 174 174 MET MET Z . n B 2 175 VAL 175 175 175 VAL VAL Z . n B 2 176 ALA 176 176 176 ALA ALA Z . n B 2 177 LEU 177 177 177 LEU LEU Z . n B 2 178 ASP 178 178 178 ASP ASP Z . n B 2 179 SER 179 179 179 SER SER Z . n B 2 180 ASN 180 180 180 ASN ASN Z . n B 2 181 ASN 181 181 181 ASN ASN Z . n B 2 182 THR 182 182 182 THR THR Z . n B 2 183 MET 183 183 183 MET MET Z . n B 2 184 PRO 184 184 184 PRO PRO Z . n B 2 185 PHE 185 185 185 PHE PHE Z . n B 2 186 THR 186 186 186 THR THR Z . n B 2 187 PRO 187 187 187 PRO PRO Z . n B 2 188 ALA 188 188 188 ALA ALA Z . n B 2 189 ALA 189 189 189 ALA ALA Z . n B 2 190 MET 190 190 190 MET MET Z . n B 2 191 ARG 191 191 191 ARG ARG Z . n B 2 192 SER 192 192 192 SER SER Z . n B 2 193 GLU 193 193 193 GLU GLU Z . n B 2 194 THR 194 194 194 THR THR Z . n B 2 195 LEU 195 195 195 LEU LEU Z . n B 2 196 GLY 196 196 196 GLY GLY Z . n B 2 197 PHE 197 197 197 PHE PHE Z . n B 2 198 TYR 198 198 198 TYR TYR Z . n B 2 199 PRO 199 199 199 PRO PRO Z . n B 2 200 TRP 200 200 200 TRP TRP Z . n B 2 201 LYS 201 201 201 LYS LYS Z . n B 2 202 PRO 202 202 202 PRO PRO Z . n B 2 203 THR 203 203 203 THR THR Z . n B 2 204 ILE 204 204 204 ILE ILE Z . n B 2 205 PRO 205 205 205 PRO PRO Z . n B 2 206 THR 206 206 206 THR THR Z . n B 2 207 PRO 207 207 207 PRO PRO Z . n B 2 208 TRP 208 208 208 TRP TRP Z . n B 2 209 ARG 209 209 209 ARG ARG Z . n B 2 210 TYR 210 210 210 TYR TYR Z . n B 2 211 TYR 211 211 211 TYR TYR Z . n B 2 212 PHE 212 212 212 PHE PHE Z . n B 2 213 GLN 213 213 213 GLN GLN Z . n B 2 214 TRP 214 214 214 TRP TRP Z . n B 2 215 ASP 215 215 215 ASP ASP Z . n B 2 216 ARG 216 216 216 ARG ARG Z . n B 2 217 THR 217 217 217 THR THR Z . n B 2 218 LEU 218 218 218 LEU LEU Z . n B 2 219 ILE 219 219 219 ILE ILE Z . n B 2 220 PRO 220 220 220 PRO PRO Z . n B 2 221 SER 221 221 221 SER SER Z . n B 2 222 HIS 222 222 222 HIS HIS Z . n B 2 223 THR 223 223 223 THR THR Z . n B 2 224 GLY 224 224 224 GLY GLY Z . n B 2 225 THR 225 225 225 THR THR Z . n B 2 226 SER 226 226 226 SER SER Z . n B 2 227 GLY 227 227 227 GLY GLY Z . n B 2 228 THR 228 228 228 THR THR Z . n B 2 229 PRO 229 229 229 PRO PRO Z . n B 2 230 THR 230 230 230 THR THR Z . n B 2 231 ASN 231 231 231 ASN ASN Z . n B 2 232 ILE 232 232 232 ILE ILE Z . n B 2 233 TYR 233 233 233 TYR TYR Z . n B 2 234 HIS 234 234 234 HIS HIS Z . n B 2 235 GLY 235 235 235 GLY GLY Z . n B 2 236 THR 236 236 236 THR THR Z . n B 2 237 ASP 237 237 237 ASP ASP Z . n B 2 238 PRO 238 238 238 PRO PRO Z . n B 2 239 ASP 239 239 239 ASP ASP Z . n B 2 240 ASP 240 240 240 ASP ASP Z . n B 2 241 VAL 241 241 241 VAL VAL Z . n B 2 242 GLN 242 242 242 GLN GLN Z . n B 2 243 PHE 243 243 243 PHE PHE Z . n B 2 244 TYR 244 244 244 TYR TYR Z . n B 2 245 THR 245 245 245 THR THR Z . n B 2 246 ILE 246 246 246 ILE ILE Z . n B 2 247 GLU 247 247 247 GLU GLU Z . n B 2 248 ASN 248 248 248 ASN ASN Z . n B 2 249 SER 249 249 249 SER SER Z . n B 2 250 VAL 250 250 250 VAL VAL Z . n B 2 251 PRO 251 251 251 PRO PRO Z . n B 2 252 VAL 252 252 252 VAL VAL Z . n B 2 253 HIS 253 253 253 HIS HIS Z . n B 2 254 LEU 254 254 254 LEU LEU Z . n B 2 255 LEU 255 255 255 LEU LEU Z . n B 2 256 ARG 256 256 256 ARG ARG Z . n B 2 257 THR 257 257 257 THR THR Z . n B 2 258 GLY 258 258 258 GLY GLY Z . n B 2 259 ASP 259 259 259 ASP ASP Z . n B 2 260 GLU 260 260 260 GLU GLU Z . n B 2 261 PHE 261 261 261 PHE PHE Z . n B 2 262 ALA 262 262 262 ALA ALA Z . n B 2 263 THR 263 263 263 THR THR Z . n B 2 264 GLY 264 264 264 GLY GLY Z . n B 2 265 THR 265 265 265 THR THR Z . n B 2 266 PHE 266 266 266 PHE PHE Z . n B 2 267 PHE 267 267 267 PHE PHE Z . n B 2 268 PHE 268 268 268 PHE PHE Z . n B 2 269 ASP 269 269 269 ASP ASP Z . n B 2 270 CYS 270 270 270 CYS CYS Z . n B 2 271 LYS 271 271 271 LYS LYS Z . n B 2 272 PRO 272 272 272 PRO PRO Z . n B 2 273 CYS 273 273 273 CYS CYS Z . n B 2 274 ARG 274 274 274 ARG ARG Z . n B 2 275 LEU 275 275 275 LEU LEU Z . n B 2 276 THR 276 276 276 THR THR Z . n B 2 277 HIS 277 277 277 HIS HIS Z . n B 2 278 THR 278 278 278 THR THR Z . n B 2 279 TRP 279 279 279 TRP TRP Z . n B 2 280 GLN 280 280 280 GLN GLN Z . n B 2 281 THR 281 281 281 THR THR Z . n B 2 282 ASN 282 282 282 ASN ASN Z . n B 2 283 ARG 283 283 283 ARG ARG Z . n B 2 284 ALA 284 284 284 ALA ALA Z . n B 2 285 LEU 285 285 285 LEU LEU Z . n B 2 286 GLY 286 286 286 GLY GLY Z . n B 2 287 LEU 287 287 287 LEU LEU Z . n B 2 288 PRO 288 288 288 PRO PRO Z . n B 2 289 PRO 289 289 289 PRO PRO Z . n B 2 290 PHE 290 290 290 PHE PHE Z . n B 2 291 LEU 291 291 291 LEU LEU Z . n B 2 292 ASN 292 292 292 ASN ASN Z . n B 2 293 SER 293 293 293 SER SER Z . n B 2 294 LEU 294 294 294 LEU LEU Z . n B 2 295 PRO 295 295 295 PRO PRO Z . n B 2 296 GLN 296 296 296 GLN GLN Z . n B 2 297 SER 297 297 297 SER SER Z . n B 2 298 GLU 298 298 298 GLU GLU Z . n B 2 299 GLY 299 299 299 GLY GLY Z . n B 2 300 ALA 300 300 300 ALA ALA Z . n B 2 301 THR 301 301 301 THR THR Z . n B 2 302 ASN 302 302 302 ASN ASN Z . n B 2 303 PHE 303 303 303 PHE PHE Z . n B 2 304 GLY 304 304 304 GLY GLY Z . n B 2 305 ASP 305 305 305 ASP ASP Z . n B 2 306 ILE 306 306 306 ILE ILE Z . n B 2 307 GLY 307 307 307 GLY GLY Z . n B 2 308 VAL 308 308 308 VAL VAL Z . n B 2 309 GLN 309 309 309 GLN GLN Z . n B 2 310 GLN 310 310 310 GLN GLN Z . n B 2 311 ASP 311 311 311 ASP ASP Z . n B 2 312 LYS 312 312 312 LYS LYS Z . n B 2 313 ARG 313 313 313 ARG ARG Z . n B 2 314 ARG 314 314 314 ARG ARG Z . n B 2 315 GLY 315 315 315 GLY GLY Z . n B 2 316 VAL 316 316 316 VAL VAL Z . n B 2 317 THR 317 317 317 THR THR Z . n B 2 318 GLN 318 318 318 GLN GLN Z . n B 2 319 MET 319 319 319 MET MET Z . n B 2 320 GLY 320 320 320 GLY GLY Z . n B 2 321 ASN 321 321 321 ASN ASN Z . n B 2 322 THR 322 322 322 THR THR Z . n B 2 323 ASN 323 323 323 ASN ASN Z . n B 2 324 TYR 324 324 324 TYR TYR Z . n B 2 325 ILE 325 325 325 ILE ILE Z . n B 2 326 THR 326 326 326 THR THR Z . n B 2 327 GLU 327 327 327 GLU GLU Z . n B 2 328 ALA 328 328 328 ALA ALA Z . n B 2 329 THR 329 329 329 THR THR Z . n B 2 330 ILE 330 330 330 ILE ILE Z . n B 2 331 MET 331 331 331 MET MET Z . n B 2 332 ARG 332 332 332 ARG ARG Z . n B 2 333 PRO 333 333 333 PRO PRO Z . n B 2 334 ALA 334 334 334 ALA ALA Z . n B 2 335 GLU 335 335 335 GLU GLU Z . n B 2 336 VAL 336 336 336 VAL VAL Z . n B 2 337 GLY 337 337 337 GLY GLY Z . n B 2 338 TYR 338 338 338 TYR TYR Z . n B 2 339 SER 339 339 339 SER SER Z . n B 2 340 ALA 340 340 340 ALA ALA Z . n B 2 341 PRO 341 341 341 PRO PRO Z . n B 2 342 TYR 342 342 342 TYR TYR Z . n B 2 343 TYR 343 343 343 TYR TYR Z . n B 2 344 SER 344 344 344 SER SER Z . n B 2 345 PHE 345 345 345 PHE PHE Z . n B 2 346 GLU 346 346 346 GLU GLU Z . n B 2 347 ALA 347 347 347 ALA ALA Z . n B 2 348 SER 348 348 348 SER SER Z . n B 2 349 THR 349 349 349 THR THR Z . n B 2 350 GLN 350 350 350 GLN GLN Z . n B 2 351 GLY 351 351 351 GLY GLY Z . n B 2 352 PRO 352 352 352 PRO PRO Z . n B 2 353 PHE 353 353 353 PHE PHE Z . n B 2 354 LYS 354 354 354 LYS LYS Z . n B 2 355 THR 355 355 355 THR THR Z . n B 2 356 PRO 356 356 356 PRO PRO Z . n B 2 357 ILE 357 357 357 ILE ILE Z . n B 2 358 ALA 358 358 358 ALA ALA Z . n B 2 359 ALA 359 359 359 ALA ALA Z . n B 2 360 GLY 360 360 360 GLY GLY Z . n B 2 361 ARG 361 361 361 ARG ARG Z . n B 2 362 GLY 362 362 362 GLY GLY Z . n B 2 363 GLY 363 363 363 GLY GLY Z . n B 2 364 ALA 364 364 364 ALA ALA Z . n B 2 365 GLN 365 365 365 GLN GLN Z . n B 2 366 THR 366 366 366 THR THR Z . n B 2 367 ASP 367 367 367 ASP ASP Z . n B 2 368 GLU 368 368 368 GLU GLU Z . n B 2 369 ASN 369 369 369 ASN ASN Z . n B 2 370 GLN 370 370 370 GLN GLN Z . n B 2 371 ALA 371 371 371 ALA ALA Z . n B 2 372 ALA 372 372 372 ALA ALA Z . n B 2 373 ASP 373 373 373 ASP ASP Z . n B 2 374 GLY 374 374 374 GLY GLY Z . n B 2 375 ASN 375 375 375 ASN ASN Z . n B 2 376 PRO 376 376 376 PRO PRO Z . n B 2 377 ARG 377 377 377 ARG ARG Z . n B 2 378 TYR 378 378 378 TYR TYR Z . n B 2 379 ALA 379 379 379 ALA ALA Z . n B 2 380 PHE 380 380 380 PHE PHE Z . n B 2 381 GLY 381 381 381 GLY GLY Z . n B 2 382 ARG 382 382 382 ARG ARG Z . n B 2 383 GLN 383 383 383 GLN GLN Z . n B 2 384 HIS 384 384 384 HIS HIS Z . n B 2 385 GLY 385 385 385 GLY GLY Z . n B 2 386 GLN 386 386 386 GLN GLN Z . n B 2 387 LYS 387 387 387 LYS LYS Z . n B 2 388 THR 388 388 388 THR THR Z . n B 2 389 THR 389 389 389 THR THR Z . n B 2 390 THR 390 390 390 THR THR Z . n B 2 391 THR 391 391 391 THR THR Z . n B 2 392 GLY 392 392 392 GLY GLY Z . n B 2 393 GLU 393 393 393 GLU GLU Z . n B 2 394 THR 394 394 394 THR THR Z . n B 2 395 PRO 395 395 395 PRO PRO Z . n B 2 396 GLU 396 396 396 GLU GLU Z . n B 2 397 ARG 397 397 397 ARG ARG Z . n B 2 398 PHE 398 398 398 PHE PHE Z . n B 2 399 THR 399 399 399 THR THR Z . n B 2 400 TYR 400 400 400 TYR TYR Z . n B 2 401 ILE 401 401 401 ILE ILE Z . n B 2 402 ALA 402 402 402 ALA ALA Z . n B 2 403 HIS 403 403 403 HIS HIS Z . n B 2 404 GLN 404 404 404 GLN GLN Z . n B 2 405 ASP 405 405 405 ASP ASP Z . n B 2 406 THR 406 406 406 THR THR Z . n B 2 407 GLY 407 407 407 GLY GLY Z . n B 2 408 ARG 408 408 408 ARG ARG Z . n B 2 409 TYR 409 409 409 TYR TYR Z . n B 2 410 PRO 410 410 410 PRO PRO Z . n B 2 411 GLU 411 411 411 GLU GLU Z . n B 2 412 GLY 412 412 412 GLY GLY Z . n B 2 413 ASP 413 413 413 ASP ASP Z . n B 2 414 TRP 414 414 414 TRP TRP Z . n B 2 415 ILE 415 415 415 ILE ILE Z . n B 2 416 GLN 416 416 416 GLN GLN Z . n B 2 417 ASN 417 417 417 ASN ASN Z . n B 2 418 ILE 418 418 418 ILE ILE Z . n B 2 419 ASN 419 419 419 ASN ASN Z . n B 2 420 PHE 420 420 420 PHE PHE Z . n B 2 421 ASN 421 421 421 ASN ASN Z . n B 2 422 LEU 422 422 422 LEU LEU Z . n B 2 423 PRO 423 423 423 PRO PRO Z . n B 2 424 VAL 424 424 424 VAL VAL Z . n B 2 425 THR 425 425 425 THR THR Z . n B 2 426 ASN 426 426 426 ASN ASN Z . n B 2 427 ASP 427 427 427 ASP ASP Z . n B 2 428 ASN 428 428 428 ASN ASN Z . n B 2 429 VAL 429 429 429 VAL VAL Z . n B 2 430 LEU 430 430 430 LEU LEU Z . n B 2 431 LEU 431 431 431 LEU LEU Z . n B 2 432 PRO 432 432 432 PRO PRO Z . n B 2 433 THR 433 433 433 THR THR Z . n B 2 434 ASP 434 434 434 ASP ASP Z . n B 2 435 PRO 435 435 435 PRO PRO Z . n B 2 436 ILE 436 436 436 ILE ILE Z . n B 2 437 GLY 437 437 437 GLY GLY Z . n B 2 438 GLY 438 438 438 GLY GLY Z . n B 2 439 LYS 439 439 439 LYS LYS Z . n B 2 440 THR 440 440 440 THR THR Z . n B 2 441 GLY 441 441 441 GLY GLY Z . n B 2 442 ILE 442 442 442 ILE ILE Z . n B 2 443 ASN 443 443 443 ASN ASN Z . n B 2 444 TYR 444 444 444 TYR TYR Z . n B 2 445 THR 445 445 445 THR THR Z . n B 2 446 ASN 446 446 446 ASN ASN Z . n B 2 447 ILE 447 447 447 ILE ILE Z . n B 2 448 PHE 448 448 448 PHE PHE Z . n B 2 449 ASN 449 449 449 ASN ASN Z . n B 2 450 THR 450 450 450 THR THR Z . n B 2 451 TYR 451 451 451 TYR TYR Z . n B 2 452 GLY 452 452 452 GLY GLY Z . n B 2 453 PRO 453 453 453 PRO PRO Z . n B 2 454 LEU 454 454 454 LEU LEU Z . n B 2 455 THR 455 455 455 THR THR Z . n B 2 456 ALA 456 456 456 ALA ALA Z . n B 2 457 LEU 457 457 457 LEU LEU Z . n B 2 458 ASN 458 458 458 ASN ASN Z . n B 2 459 ASN 459 459 459 ASN ASN Z . n B 2 460 VAL 460 460 460 VAL VAL Z . n B 2 461 PRO 461 461 461 PRO PRO Z . n B 2 462 PRO 462 462 462 PRO PRO Z . n B 2 463 VAL 463 463 463 VAL VAL Z . n B 2 464 TYR 464 464 464 TYR TYR Z . n B 2 465 PRO 465 465 465 PRO PRO Z . n B 2 466 ASN 466 466 466 ASN ASN Z . n B 2 467 GLY 467 467 467 GLY GLY Z . n B 2 468 GLN 468 468 468 GLN GLN Z . n B 2 469 ILE 469 469 469 ILE ILE Z . n B 2 470 TRP 470 470 470 TRP TRP Z . n B 2 471 ASP 471 471 471 ASP ASP Z . n B 2 472 LYS 472 472 472 LYS LYS Z . n B 2 473 GLU 473 473 473 GLU GLU Z . n B 2 474 PHE 474 474 474 PHE PHE Z . n B 2 475 ASP 475 475 475 ASP ASP Z . n B 2 476 THR 476 476 476 THR THR Z . n B 2 477 ASP 477 477 477 ASP ASP Z . n B 2 478 LEU 478 478 478 LEU LEU Z . n B 2 479 LYS 479 479 479 LYS LYS Z . n B 2 480 PRO 480 480 480 PRO PRO Z . n B 2 481 ARG 481 481 481 ARG ARG Z . n B 2 482 LEU 482 482 482 LEU LEU Z . n B 2 483 HIS 483 483 483 HIS HIS Z . n B 2 484 VAL 484 484 484 VAL VAL Z . n B 2 485 ASN 485 485 485 ASN ASN Z . n B 2 486 ALA 486 486 486 ALA ALA Z . n B 2 487 PRO 487 487 487 PRO PRO Z . n B 2 488 PHE 488 488 488 PHE PHE Z . n B 2 489 VAL 489 489 489 VAL VAL Z . n B 2 490 CYS 490 490 490 CYS CYS Z . n B 2 491 GLN 491 491 491 GLN GLN Z . n B 2 492 ASN 492 492 492 ASN ASN Z . n B 2 493 ASN 493 493 493 ASN ASN Z . n B 2 494 CYS 494 494 494 CYS CYS Z . n B 2 495 PRO 495 495 495 PRO PRO Z . n B 2 496 GLY 496 496 496 GLY GLY Z . n B 2 497 GLN 497 497 497 GLN GLN Z . n B 2 498 LEU 498 498 498 LEU LEU Z . n B 2 499 PHE 499 499 499 PHE PHE Z . n B 2 500 VAL 500 500 500 VAL VAL Z . n B 2 501 LYS 501 501 501 LYS LYS Z . n B 2 502 VAL 502 502 502 VAL VAL Z . n B 2 503 ALA 503 503 503 ALA ALA Z . n B 2 504 PRO 504 504 504 PRO PRO Z . n B 2 505 ASN 505 505 505 ASN ASN Z . n B 2 506 LEU 506 506 506 LEU LEU Z . n B 2 507 THR 507 507 507 THR THR Z . n B 2 508 ASN 508 508 508 ASN ASN Z . n B 2 509 GLU 509 509 509 GLU GLU Z . n B 2 510 TYR 510 510 510 TYR TYR Z . n B 2 511 ASP 511 511 511 ASP ASP Z . n B 2 512 PRO 512 512 512 PRO PRO Z . n B 2 513 ASP 513 513 513 ASP ASP Z . n B 2 514 ALA 514 514 514 ALA ALA Z . n B 2 515 SER 515 515 515 SER SER Z . n B 2 516 ALA 516 516 516 ALA ALA Z . n B 2 517 ASN 517 517 517 ASN ASN Z . n B 2 518 MET 518 518 518 MET MET Z . n B 2 519 SER 519 519 519 SER SER Z . n B 2 520 ARG 520 520 520 ARG ARG Z . n B 2 521 ILE 521 521 521 ILE ILE Z . n B 2 522 VAL 522 522 522 VAL VAL Z . n B 2 523 THR 523 523 523 THR THR Z . n B 2 524 TYR 524 524 524 TYR TYR Z . n B 2 525 SER 525 525 525 SER SER Z . n B 2 526 ASP 526 526 526 ASP ASP Z . n B 2 527 PHE 527 527 527 PHE PHE Z . n B 2 528 TRP 528 528 528 TRP TRP Z . n B 2 529 TRP 529 529 529 TRP TRP Z . n B 2 530 LYS 530 530 530 LYS LYS Z . n B 2 531 GLY 531 531 531 GLY GLY Z . n B 2 532 LYS 532 532 532 LYS LYS Z . n B 2 533 LEU 533 533 533 LEU LEU Z . n B 2 534 VAL 534 534 534 VAL VAL Z . n B 2 535 PHE 535 535 535 PHE PHE Z . n B 2 536 LYS 536 536 536 LYS LYS Z . n B 2 537 ALA 537 537 537 ALA ALA Z . n B 2 538 LYS 538 538 538 LYS LYS Z . n B 2 539 LEU 539 539 539 LEU LEU Z . n B 2 540 ARG 540 540 540 ARG ARG Z . n B 2 541 ALA 541 541 541 ALA ALA Z . n B 2 542 SER 542 542 542 SER SER Z . n B 2 543 HIS 543 543 543 HIS HIS Z . n B 2 544 THR 544 544 544 THR THR Z . n B 2 545 TRP 545 545 545 TRP TRP Z . n B 2 546 ASN 546 546 546 ASN ASN Z . n B 2 547 PRO 547 547 547 PRO PRO Z . n B 2 548 ILE 548 548 548 ILE ILE Z . n B 2 549 GLN 549 549 549 GLN GLN Z . n B 2 550 GLN 550 550 550 GLN GLN Z . n B 2 551 MET 551 551 551 MET MET Z . n B 2 552 SER 552 552 552 SER SER Z . n B 2 553 ILE 553 553 553 ILE ILE Z . n B 2 554 ASN 554 554 554 ASN ASN Z . n B 2 555 VAL 555 555 555 VAL VAL Z . n B 2 556 ASP 556 556 556 ASP ASP Z . n B 2 557 ASN 557 557 557 ASN ASN Z . n B 2 558 GLN 558 558 558 GLN GLN Z . n B 2 559 PHE 559 559 559 PHE PHE Z . n B 2 560 ASN 560 560 560 ASN ASN Z . n B 2 561 TYR 561 561 561 TYR TYR Z . n B 2 562 VAL 562 562 562 VAL VAL Z . n B 2 563 PRO 563 563 563 PRO PRO Z . n B 2 564 SER 564 564 564 SER SER Z . n B 2 565 ASN 565 565 565 ASN ASN Z . n B 2 566 ILE 566 566 566 ILE ILE Z . n B 2 567 GLY 567 567 567 GLY GLY Z . n B 2 568 GLY 568 568 568 GLY GLY Z . n B 2 569 MET 569 569 569 MET MET Z . n B 2 570 LYS 570 570 570 LYS LYS Z . n B 2 571 ILE 571 571 571 ILE ILE Z . n B 2 572 VAL 572 572 572 VAL VAL Z . n B 2 573 TYR 573 573 573 TYR TYR Z . n B 2 574 GLU 574 574 574 GLU GLU Z . n B 2 575 LYS 575 575 575 LYS LYS Z . n B 2 576 SER 576 576 576 SER SER Z . n B 2 577 GLN 577 577 577 GLN GLN Z . n B 2 578 LEU 578 578 578 LEU LEU Z . n B 2 579 ALA 579 579 579 ALA ALA Z . n B 2 580 PRO 580 580 580 PRO PRO Z . n B 2 581 ARG 581 581 581 ARG ARG Z . n B 2 582 LYS 582 582 582 LYS LYS Z . n B 2 583 LEU 583 583 583 LEU LEU Z . n B 2 584 TYR 584 584 584 TYR TYR Z . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 12 1 MG MG N . D 3 MG 1 13 2 MG MG N . E 3 MG 1 585 3 MG MG Z . F 3 MG 1 586 4 MG MG Z . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete icosahedral assembly' ? 120-MERIC 120 2 'icosahedral asymmetric unit' ? dimeric 2 3 'icosahedral pentamer' ? decameric 10 4 'icosahedral 23 hexamer' ? dodecameric 12 5 'icosahedral asymmetric unit, std point frame' ? dimeric 2 6 'crystal asymmetric unit, crystal frame' ? 120-meric 120 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A,B,C,D,E,F 2 1 A,B,C,D,E,F 3 '(1-5)' A,B,C,D,E,F 4 '(1,2,6,10,23,24)' A,B,C,D,E,F 5 P A,B,C,D,E,F 6 '(X0)(1-60)' A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] X0 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 P 'transform to point frame' ? ? -0.01121701 -0.99895340 0.04426612 2.18655 -0.56747874 -0.03009110 -0.82283521 -91.80735 0.82331238 -0.03435444 -0.56654949 16.83287 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.42068488 0.85725203 -0.29687292 -57.82013 -0.88228120 0.31042008 -0.35387133 -81.56334 -0.21120183 0.41079762 0.88692902 -21.39948 3 'point symmetry operation' ? ? -0.51666147 0.50478652 -0.69155208 -145.71159 -0.57030188 -0.80534622 -0.16178213 -48.29596 -0.63860948 0.31081497 0.70397370 -61.67362 4 'point symmetry operation' ? ? -0.51665825 -0.57030117 -0.63860429 -142.21138 0.50479313 -0.80534780 0.31080687 53.82775 -0.69156009 -0.16177534 0.70397206 -65.16492 5 'point symmetry operation' ? ? 0.42069009 -0.88227640 -0.21120160 -52.15666 0.85725908 0.31041752 0.41079372 83.67629 -0.29687772 -0.35386955 0.88692637 -27.04852 6 'point symmetry operation' ? ? 0.35568263 -0.05656871 -0.93289172 -104.14861 -0.05656156 -0.99763985 0.03892195 -1.15642 -0.93289526 0.03892701 -0.35804277 -151.27912 7 'point symmetry operation' ? ? 0.39656825 -0.09588011 -0.91298324 -100.13689 0.84818390 -0.34218591 0.40434874 82.65191 -0.35118021 -0.93472574 -0.05438234 -92.85208 8 'point symmetry operation' ? ? 0.44424723 -0.06485553 -0.89355249 -95.70884 0.57332314 0.78699149 0.22791560 52.86678 0.68844039 -0.61354772 0.38679526 4.85631 9 'point symmetry operation' ? ? 0.43282882 -0.00636986 -0.90145210 -96.98388 -0.50129561 0.82940757 -0.24655290 -49.34977 0.74924621 0.55860396 0.35579759 6.81638 10 'point symmetry operation' ? ? 0.37809289 -0.00124833 -0.92576508 -102.19994 -0.89058577 -0.27355525 -0.36335739 -82.73794 -0.25279433 0.96185553 -0.10453763 -89.68062 11 'point symmetry operation' ? ? -0.35593434 0.03415219 0.93388505 -27.66827 0.03415087 -0.99818912 0.04951822 5.52497 0.93388841 0.04952032 0.35412345 18.87972 12 'point symmetry operation' ? ? -0.37710627 0.08911386 0.92187154 -29.85832 0.88459191 -0.26024008 0.38701119 83.90633 0.27439036 0.96142291 0.01931236 -46.73493 13 'point symmetry operation' ? ? -0.43196735 0.08309026 0.89805243 -35.04999 0.52000189 0.83651773 0.17273158 45.70333 -0.73689228 0.54160014 -0.40455038 -141.43035 14 'point symmetry operation' ? ? -0.44470143 0.02440580 0.89534492 -36.06856 -0.55576816 0.77640230 -0.29719348 -56.28880 -0.70240128 -0.62976718 -0.33170088 -134.34069 15 'point symmetry operation' ? ? -0.39771044 -0.00583958 0.91749069 -31.50640 -0.85604061 -0.35750889 -0.37334352 -81.12039 0.33019798 -0.93388923 0.13718534 -35.26362 16 'point symmetry operation' ? ? -0.99974830 0.02241651 -0.00099333 -131.91501 0.02241069 0.99582897 -0.08844017 -4.36855 -0.00099315 -0.08844734 -0.99608068 -132.01220 17 'point symmetry operation' ? ? -0.44014687 -0.85048577 0.28798462 -75.91654 -0.85049461 0.29200591 -0.43748860 -84.99490 0.28799168 -0.43749479 -0.85185904 -103.42511 18 'point symmetry operation' ? ? 0.50438159 -0.52302125 0.68705214 12.73855 -0.52302314 -0.81816301 -0.23886505 -50.27414 0.68706137 -0.23886739 -0.68621858 -66.16394 19 'point symmetry operation' ? ? 0.52853085 0.55226523 0.64471148 11.53194 0.55227065 -0.80046207 0.23293951 51.81082 0.64471516 0.23293855 -0.72806878 -71.72237 20 'point symmetry operation' ? ? -0.40107254 0.88936431 0.21947599 -77.86887 0.88936730 0.32064662 0.32590719 80.18204 0.21947407 0.32590325 -0.91957408 -112.41884 21 'point symmetry operation' ? ? -0.47008306 0.54249723 -0.69621191 -142.94857 -0.80262572 0.06541085 0.59289270 -13.72757 0.36718292 0.83750606 0.40467221 -15.14343 22 'point symmetry operation' ? ? -0.52935070 -0.52057982 -0.66990983 -145.11762 -0.52058329 -0.42418877 0.74098456 14.65763 -0.66991505 0.74098538 -0.04646052 -113.34356 23 'point symmetry operation' ? ? 0.37809413 -0.89058276 -0.25279432 -57.71454 -0.00124505 -0.27355309 0.96185605 63.49938 -0.92576805 -0.36335516 -0.10454104 -134.05200 24 'point symmetry operation' ? ? 0.99819353 -0.05618011 -0.02130482 -1.52742 0.03768121 0.30914449 0.95027027 65.30005 -0.04679593 -0.94935449 0.31069597 -48.65039 25 'point symmetry operation' ? ? 0.47399120 0.82951202 -0.29535196 -54.20494 -0.45759928 0.51863573 0.72223837 17.57117 0.75229172 -0.20718145 0.62540706 24.83915 26 'point symmetry operation' ? ? 0.45160793 -0.54172632 0.70892528 10.70490 -0.84228655 0.00322657 0.53902786 -19.90315 -0.29428685 -0.84054780 -0.45483450 -115.57199 27 'point symmetry operation' ? ? 0.51821325 0.51020390 0.68639765 13.60724 -0.47102763 -0.49961889 0.72698972 16.99988 0.71385937 -0.70004584 -0.01859435 -20.26517 28 'point symmetry operation' ? ? -0.37710728 0.88458742 0.27439599 -72.65840 0.08910858 -0.26023547 0.96142445 69.42814 0.92187428 0.38701059 0.01930877 -4.04463 29 'point symmetry operation' ? ? -0.99705111 0.06403894 0.04229258 -128.87585 0.06403289 0.39055707 0.91835120 64.92756 0.04228836 0.91834646 -0.39350596 -89.32659 30 'point symmetry operation' ? ? -0.48487695 -0.81747142 0.31084645 -77.35450 -0.51160096 0.55338558 0.65729574 9.71778 -0.70934056 0.15967365 -0.68654261 -158.25429 31 'point symmetry operation' ? ? -0.46433879 -0.59204584 -0.65868500 -140.08919 0.84161151 -0.06334359 -0.53636392 20.03474 0.27582724 -0.80340983 0.52768237 -13.03546 32 'point symmetry operation' ? ? 0.46612608 -0.85242451 -0.23684919 -50.85631 0.52322114 0.48147303 -0.70315291 -11.98292 0.71342225 0.20382958 0.67043488 25.25284 33 'point symmetry operation' ? ? 0.99819330 0.03768075 -0.04680003 -3.21274 -0.05617618 0.30913772 -0.94935642 -66.45908 -0.02130613 0.95026852 0.31070297 -46.96931 34 'point symmetry operation' ? ? 0.39656405 0.84817475 -0.35117901 -63.00028 -0.09587305 -0.34218795 -0.93472956 -68.10953 -0.91298824 0.40435375 -0.05437610 -129.89334 35 'point symmetry operation' ? ? -0.50733049 0.45898232 -0.72934472 -147.59458 0.45899025 -0.57239407 -0.67948615 -14.65341 -0.72934973 -0.67947907 0.07972455 -108.92107 36 'point symmetry operation' ? ? 0.48281392 0.59127492 0.64597163 8.60098 0.80330076 -0.00529383 -0.59555664 13.59598 -0.34872331 0.80645157 -0.47752008 -120.66073 37 'point symmetry operation' ? ? -0.45498862 0.86280043 0.22036137 -81.36520 0.46838979 0.44233464 -0.76482137 -19.67458 -0.75736657 -0.24476912 -0.60538000 -156.05570 38 'point symmetry operation' ? ? -0.99918015 -0.03168541 0.02519836 -130.14620 -0.03168735 0.22465084 -0.97392407 -66.46845 0.02519990 -0.97392394 -0.22547070 -79.34566 39 'point symmetry operation' ? ? -0.39770647 -0.85603358 0.33019125 -70.32834 -0.00584105 -0.35751361 -0.93389190 -62.11808 0.91749581 -0.37334571 0.13718610 3.45872 40 'point symmetry operation' ? ? 0.51821623 -0.47102292 0.71385023 15.42214 0.51020998 -0.49962724 -0.70004796 -12.63554 0.68639856 0.72698686 -0.01858899 -22.07539 41 'point symmetry operation' ? ? -0.47008127 -0.80261524 0.36718245 -72.65500 0.54250040 0.06540758 0.83750639 91.13026 -0.69622165 0.59289312 0.40467370 -85.25676 42 'point symmetry operation' ? ? 0.43282664 -0.50128833 0.74924170 12.13163 -0.00636905 0.82940903 0.55860918 36.50576 -0.90145620 -0.24655249 0.35579832 -102.01928 43 'point symmetry operation' ? ? 0.46611967 0.52321826 0.71342128 11.95890 -0.85243064 0.48148066 0.20383342 -42.72930 -0.23684563 -0.70314889 0.67043365 -37.40123 44 'point symmetry operation' ? ? -0.41621202 0.85507125 0.30922378 -72.93448 -0.82645600 -0.49755234 0.26346715 -37.07476 0.37914085 -0.14589538 0.91376436 19.29746 45 'point symmetry operation' ? ? -0.99481603 0.03566109 0.09523642 -125.22874 0.03565879 -0.75469965 0.65509858 45.65501 0.09523086 0.65510264 0.74951567 -10.27889 46 'point symmetry operation' ? ? -0.46434534 0.84160616 0.27582855 -78.31557 -0.59204734 -0.06334013 -0.80341145 -92.14327 -0.65868707 -0.53635671 0.52768547 -74.65055 47 'point symmetry operation' ? ? -0.99613185 -0.02349982 0.08467162 -126.01386 -0.02349959 -0.85723534 -0.51439185 -35.55219 0.08466961 -0.51438478 0.85336717 -4.11034 48 'point symmetry operation' ? ? -0.41620696 -0.82644796 0.37913820 -68.31260 0.85507720 -0.49755908 -0.14590166 46.73326 0.30921853 0.26346904 0.91376604 14.68738 49 'point symmetry operation' ? ? 0.47399284 -0.45759123 0.75228550 15.04704 0.82951977 0.51862828 -0.20718179 40.99738 -0.29535928 0.72223721 0.62541287 -44.23521 50 'point symmetry operation' ? ? 0.44424168 0.57332291 0.68843662 8.86486 -0.06485238 0.78699035 -0.61354518 -44.83303 -0.89355784 0.22791772 0.38680196 -99.44909 51 'point symmetry operation' ? ? 0.48281550 0.80329049 -0.34871803 -57.15078 0.59127673 -0.00528797 0.80645253 92.29348 0.64597708 -0.59555739 -0.47752753 -55.07767 52 'point symmetry operation' ? ? -0.43196502 0.51999952 -0.73688446 -143.12391 0.08308240 0.83652046 0.54160336 41.27942 0.89805656 0.17272501 -0.40455544 -33.63365 53 'point symmetry operation' ? ? -0.48487560 -0.51159499 -0.70933843 -144.79159 -0.81748239 0.55338468 0.15967822 -43.34385 0.31084964 0.65728770 -0.68654306 -90.99015 54 'point symmetry operation' ? ? 0.39720438 -0.86586449 -0.30414760 -59.84914 -0.86586771 -0.46341129 0.18848466 -44.62985 -0.30414368 0.18848153 -0.93379310 -147.88243 55 'point symmetry operation' ? ? 0.99527037 -0.05322058 -0.08127194 -5.68415 0.00479331 -0.80868997 0.58821316 39.19863 -0.09702354 -0.58581932 -0.80461438 -125.68729 56 'point symmetry operation' ? ? 0.45161112 -0.84228140 -0.29429298 -55.61053 -0.54172979 0.00322052 -0.84054748 -91.28048 0.70893164 0.53902097 -0.45483164 -49.42662 57 'point symmetry operation' ? ? 0.99527023 0.00478863 -0.09702885 -6.72574 -0.05321377 -0.80869415 -0.58582070 -42.23299 -0.08126997 0.58821226 -0.80461005 -124.64833 58 'point symmetry operation' ? ? 0.43496289 0.81482468 -0.38322104 -62.58660 0.81483582 -0.53730626 -0.21760998 39.33989 -0.38322254 -0.21760785 -0.89765662 -150.70761 59 'point symmetry operation' ? ? -0.45498520 0.46838447 -0.75736167 -145.99530 0.86280395 0.44233535 -0.24477002 40.70722 0.22036211 -0.76482335 -0.60538413 -91.59142 60 'point symmetry operation' ? ? -0.44469603 -0.55576341 -0.70240110 -141.68385 0.02440029 0.77639927 -0.62976656 -40.02061 0.89535052 -0.29720103 -0.33170324 -28.99633 # _pdbx_point_symmetry.entry_id 4DPV _pdbx_point_symmetry.Schoenflies_symbol I _pdbx_point_symmetry.H-M_notation 532 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A DA 3 ? N DA 3 ? 1_555 MG ? D MG . ? N MG 13 ? 1_555 OP1 ? A DT 9 ? N DT 9 ? 1_555 78.5 ? 2 OP1 ? A DC 4 ? N DC 4 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OP1 ? A DT 6 ? N DT 6 ? 1_555 107.5 ? 3 OP1 ? A DC 4 ? N DC 4 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OP2 ? A DC 7 ? N DC 7 ? 1_555 155.0 ? 4 OP1 ? A DT 6 ? N DT 6 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OP2 ? A DC 7 ? N DC 7 ? 1_555 80.3 ? 5 OP1 ? A DC 4 ? N DC 4 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OP2 ? A DT 9 ? N DT 9 ? 1_555 91.3 ? 6 OP1 ? A DT 6 ? N DT 6 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OP2 ? A DT 9 ? N DT 9 ? 1_555 140.6 ? 7 OP2 ? A DC 7 ? N DC 7 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OP2 ? A DT 9 ? N DT 9 ? 1_555 69.8 ? 8 OP1 ? A DC 4 ? N DC 4 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OD1 ? B ASN 180 ? Z ASN 180 ? 1_555 78.7 ? 9 OP1 ? A DT 6 ? N DT 6 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OD1 ? B ASN 180 ? Z ASN 180 ? 1_555 71.5 ? 10 OP2 ? A DC 7 ? N DC 7 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OD1 ? B ASN 180 ? Z ASN 180 ? 1_555 81.6 ? 11 OP2 ? A DT 9 ? N DT 9 ? 1_555 MG ? C MG . ? N MG 12 ? 1_555 OD1 ? B ASN 180 ? Z ASN 180 ? 1_555 79.1 ? 12 OD2 ? B ASP 237 ? Z ASP 237 ? 1_555 MG ? E MG . ? Z MG 585 ? 1_555 OD2 ? B ASP 240 ? Z ASP 240 ? 1_555 83.7 ? 13 OD2 ? B ASP 237 ? Z ASP 237 ? 1_555 MG ? E MG . ? Z MG 585 ? 1_555 OD1 ? B ASP 240 ? Z ASP 240 ? 1_555 79.0 ? 14 OD2 ? B ASP 240 ? Z ASP 240 ? 1_555 MG ? E MG . ? Z MG 585 ? 1_555 OD1 ? B ASP 240 ? Z ASP 240 ? 1_555 42.3 ? 15 OD2 ? B ASP 237 ? Z ASP 237 ? 1_555 MG ? F MG . ? Z MG 586 ? 1_555 OD1 ? B ASP 237 ? Z ASP 237 ? 1_555 48.6 ? 16 OD2 ? B ASP 237 ? Z ASP 237 ? 1_555 MG ? F MG . ? Z MG 586 ? 1_555 OD2 ? B ASP 239 ? Z ASP 239 ? 1_555 85.6 ? 17 OD1 ? B ASP 237 ? Z ASP 237 ? 1_555 MG ? F MG . ? Z MG 586 ? 1_555 OD2 ? B ASP 239 ? Z ASP 239 ? 1_555 66.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-04-01 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2023-04-19 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation ? 'Coordinates and associated matrices have been transformed from the icosahedral point symmetry frame to the crystallographic frame' # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' Other 9 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' cell 3 4 'Structure model' database_2 4 4 'Structure model' database_PDB_matrix 5 4 'Structure model' pdbx_database_remark 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' pdbx_struct_oper_list 8 4 'Structure model' pdbx_validate_main_chain_plane 9 4 'Structure model' pdbx_validate_peptide_omega 10 4 'Structure model' pdbx_validate_rmsd_angle 11 4 'Structure model' pdbx_validate_rmsd_bond 12 4 'Structure model' pdbx_validate_torsion 13 4 'Structure model' struct_conn 14 4 'Structure model' struct_ncs_oper 15 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.Cartn_x' 2 4 'Structure model' '_atom_site.Cartn_y' 3 4 'Structure model' '_atom_site.Cartn_z' 4 4 'Structure model' '_cell.Z_PDB' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_database_PDB_matrix.origx[1][1]' 8 4 'Structure model' '_database_PDB_matrix.origx[1][2]' 9 4 'Structure model' '_database_PDB_matrix.origx[1][3]' 10 4 'Structure model' '_database_PDB_matrix.origx[2][1]' 11 4 'Structure model' '_database_PDB_matrix.origx[2][2]' 12 4 'Structure model' '_database_PDB_matrix.origx[2][3]' 13 4 'Structure model' '_database_PDB_matrix.origx[3][1]' 14 4 'Structure model' '_database_PDB_matrix.origx[3][2]' 15 4 'Structure model' '_database_PDB_matrix.origx[3][3]' 16 4 'Structure model' '_database_PDB_matrix.origx_vector[1]' 17 4 'Structure model' '_database_PDB_matrix.origx_vector[2]' 18 4 'Structure model' '_database_PDB_matrix.origx_vector[3]' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 31 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 32 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 33 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 34 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 35 4 'Structure model' '_pdbx_struct_conn_angle.value' 36 4 'Structure model' '_pdbx_struct_oper_list.id' 37 4 'Structure model' '_pdbx_struct_oper_list.matrix[1][1]' 38 4 'Structure model' '_pdbx_struct_oper_list.matrix[1][2]' 39 4 'Structure model' '_pdbx_struct_oper_list.matrix[1][3]' 40 4 'Structure model' '_pdbx_struct_oper_list.matrix[2][1]' 41 4 'Structure model' '_pdbx_struct_oper_list.matrix[2][2]' 42 4 'Structure model' '_pdbx_struct_oper_list.matrix[2][3]' 43 4 'Structure model' '_pdbx_struct_oper_list.matrix[3][1]' 44 4 'Structure model' '_pdbx_struct_oper_list.matrix[3][2]' 45 4 'Structure model' '_pdbx_struct_oper_list.matrix[3][3]' 46 4 'Structure model' '_pdbx_struct_oper_list.name' 47 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 48 4 'Structure model' '_pdbx_struct_oper_list.type' 49 4 'Structure model' '_pdbx_struct_oper_list.vector[1]' 50 4 'Structure model' '_pdbx_struct_oper_list.vector[2]' 51 4 'Structure model' '_pdbx_struct_oper_list.vector[3]' 52 4 'Structure model' '_pdbx_validate_main_chain_plane.improper_torsion_angle' 53 4 'Structure model' '_pdbx_validate_peptide_omega.omega' 54 4 'Structure model' '_pdbx_validate_rmsd_angle.angle_deviation' 55 4 'Structure model' '_pdbx_validate_rmsd_angle.angle_standard_deviation' 56 4 'Structure model' '_pdbx_validate_rmsd_angle.angle_target_value' 57 4 'Structure model' '_pdbx_validate_rmsd_angle.angle_value' 58 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_asym_id_1' 59 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_asym_id_2' 60 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_asym_id_3' 61 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_atom_id_1' 62 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_atom_id_2' 63 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_atom_id_3' 64 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_comp_id_1' 65 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_comp_id_2' 66 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_comp_id_3' 67 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_seq_id_1' 68 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_seq_id_2' 69 4 'Structure model' '_pdbx_validate_rmsd_angle.auth_seq_id_3' 70 4 'Structure model' '_pdbx_validate_rmsd_angle.linker_flag' 71 4 'Structure model' '_pdbx_validate_rmsd_bond.bond_deviation' 72 4 'Structure model' '_pdbx_validate_rmsd_bond.bond_value' 73 4 'Structure model' '_pdbx_validate_torsion.phi' 74 4 'Structure model' '_pdbx_validate_torsion.psi' 75 4 'Structure model' '_struct_conn.pdbx_dist_value' 76 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 77 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 78 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 79 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 80 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 81 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 82 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 83 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 84 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 85 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 86 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 87 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 88 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 89 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 90 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 91 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PURDUE 'data collection' SOFTWARE ? 1 TNT refinement . ? 2 PURDUE 'data reduction' 'DATA PROCESSING PACKAGE' ? 3 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ;SHEET THE STRUCTURE OF CANINE PARVOVIRUS FOLLOWS THE CANONICAL PICORNA-VIRUS LIKE "JELLY ROLL" BARREL. THE SHEET IDENTIFIED AS "BDG" IS THAT REFERRED TO AS "BIDG" IN THE LITERATURE WITH STRANDS 1 TO 5 CORRESPONDING TO STRANDS A, B, I, D, AND G. THE SHEET IDENTIFIED AS "CHF" IS THE SO-CALLED CHEF SHEET WITH STRANDS 1 TO 4 CORRESPONDING TO STRANDS C, H, E, AND F. THESE TWO SHEETS ARE LOOSELY CONNECTED TOGETHER BY HYDROGEN BONDS BETWEEN STRAND 4 OF "CHF" AND RESIDUE 45 IMMEDIATELY PRECEDING STRAND 1 OF "BDG" OF A FIVE-FOLD RELATED PROTOMER THAT IS GENERATED USING THE SYMMETRY OPERATORS LISTED BELOW. CPV CONTAINS SEVERAL LONG LOOPS BETWEEN STRANDS OF "BDG" AND "CHF" WITH LITTLE ORGANIZED SECONDARY STRUCTURE. THERE ARE STRANDS WITHIN THE LOOPS THAT ARE LOOSELY HYDROGEN-BONDED TOGETHER. WITH FEWER HYDROGEN BONDS AND LESS REGULAR SECONDARY STRUCTURE THEY MUST BE REGARDED MORE TENTATIVELY. THIS IS WHY THE SHEET "LP2" HAS BEEN IDENTIFIED SEPARATELY, ALTHOUGH IT COULD BE CONSIDERED TO BE AN EXTENSION OF SHEET "CHF", EXTENDING FROM STRAND 1. STRAND 1 OF "LP2" HAS A BULGE AND A CHANGE OF DIRECTION AT RESIDUE 107, AFTER WHICH IT BECOMES STRAND 1 OF "CHF". THE MIDDLE STRAND OF "LP2" CONTAINS TWO SEGMENTS THAT RUN IN THE SAME GENERAL DIRECTION, BUT ARE SEPARATED BY NON-BETA STRUCTURE. THE FIRST SEGMENT (206 - 211) HYDROGEN BONDS ON ONE SIDE ONLY, TO RESIDUES 103 - 111, AND THE SECOND SEGMENT (215 - 218) HYDROGEN BONDS ON THE OPPOSITE SIDE TO RESIDUES 230 - 235. IN ORDER TO REPRESENT THE BIFURCATED SHEET STRUCTURE IN THE *SHEET* RECORDS BELOW, TWO SHEETS, *BDG* AND *CDG* ARE DEFINED. STRANDS 1 - 4 OF THESE SHEETS ARE IDENTICAL. THE CHAIN DESIGNATORS IN THE SECONDARY STRUCTURE LIST REFER TO THE NON-CRYSTALLOGRAPHIC ICOSAHEDRAL SYMMETRY OPERATORS LABELED "A" TO "H" IN *REMARK 8*, AND ARE USED WHEN A SHEET SPANS TWO SUBUNITS. PDB FORMAT DOES NOT ALLOW STRANDS FROM ANOTHER ASYMMETRIC UNIT TO BE PRESENTED ON SHEET RECORDS. THE FOLLOWING STRANDS COME FROM OTHER ASYMMETRIC UNITS: CHF 6 GLY A 43 PHE A 45 -1 O GLY A 43 N LEU Z 254 GH1 4 TRP F 414 ASN F 417 -1 N TRP F 414 O PHE Z 345 GH1 4 ASN F 428 LEU F 430 -1 N LEU F 430 O ILE F 415 GH2 3 GLY F 315 THR F 317 -1 N THR F 317 O ARG Z 377 ; # _pdbx_entry_details.entry_id 4DPV _pdbx_entry_details.compound_details ;VP3 IS A PROTEOLYTIC CLEAVAGE PRODUCT, MISSING THE 15 - 20 N-TERMINAL RESIDUES OF VP2. UP TO 20 PERCENT OF THE 60 COPIES OF VP2 IN EACH CAPSID ARE REPLACED BY VP1, THE PRODUCT OF ALTERATE TRANSCRIPTIONAL SPLICING, CONTAINING AN ADDITIONAL 153 N-TERMINAL AMINO ACIDS. NO EVIDENCE IS SEEN FOR THIS EXTENSION IN THE SIXTY-FOLD AVERAGED ELECTRON DENSITY MAP. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P N DA 1 ? ? "O5'" N DA 1 ? ? 1.660 1.593 0.067 0.010 N 2 1 "C1'" N DT 9 ? ? N1 N DT 9 ? ? 1.572 1.488 0.084 0.013 N 3 1 "O3'" N DG 10 ? ? "C3'" N DG 10 ? ? 1.518 1.435 0.083 0.013 N 4 1 P N DC 11 ? ? "O5'" N DC 11 ? ? 1.662 1.593 0.069 0.010 N 5 1 "C1'" N DC 11 ? ? N1 N DC 11 ? ? 1.602 1.488 0.114 0.013 N 6 1 CD Z GLU 50 ? ? OE2 Z GLU 50 ? ? 1.327 1.252 0.075 0.011 N 7 1 CD Z GLU 55 ? ? OE1 Z GLU 55 ? ? 1.339 1.252 0.087 0.011 N 8 1 CD Z GLU 60 ? ? OE2 Z GLU 60 ? ? 1.324 1.252 0.072 0.011 N 9 1 CD Z GLU 75 ? ? OE2 Z GLU 75 ? ? 1.376 1.252 0.124 0.011 N 10 1 CD Z GLU 77 ? ? OE2 Z GLU 77 ? ? 1.328 1.252 0.076 0.011 N 11 1 CD Z GLU 135 ? ? OE2 Z GLU 135 ? ? 1.318 1.252 0.066 0.011 N 12 1 CD Z GLU 142 ? ? OE1 Z GLU 142 ? ? 1.333 1.252 0.081 0.011 N 13 1 CD Z GLU 144 ? ? OE2 Z GLU 144 ? ? 1.338 1.252 0.086 0.011 N 14 1 CD Z GLU 155 ? ? OE2 Z GLU 155 ? ? 1.330 1.252 0.078 0.011 N 15 1 CD Z GLU 193 ? ? OE2 Z GLU 193 ? ? 1.326 1.252 0.074 0.011 N 16 1 CD Z GLU 260 ? ? OE2 Z GLU 260 ? ? 1.329 1.252 0.077 0.011 N 17 1 CD Z GLU 368 ? ? OE2 Z GLU 368 ? ? 1.327 1.252 0.075 0.011 N 18 1 CD Z GLU 393 ? ? OE2 Z GLU 393 ? ? 1.337 1.252 0.085 0.011 N 19 1 CD Z GLU 396 ? ? OE2 Z GLU 396 ? ? 1.321 1.252 0.069 0.011 N 20 1 CD Z GLU 411 ? ? OE2 Z GLU 411 ? ? 1.324 1.252 0.072 0.011 N 21 1 CD Z GLU 509 ? ? OE2 Z GLU 509 ? ? 1.348 1.252 0.096 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" N DA 1 ? ? "O3'" N DA 1 ? ? P N DT 2 ? ? 128.09 119.70 8.39 1.20 Y 2 1 P N DA 3 ? ? "O5'" N DA 3 ? ? "C5'" N DA 3 ? ? 107.37 120.90 -13.53 1.60 N 3 1 N9 N DA 3 ? ? "C1'" N DA 3 ? ? "C2'" N DA 3 ? ? 122.73 114.30 8.43 1.40 N 4 1 "O4'" N DA 3 ? ? "C1'" N DA 3 ? ? N9 N DA 3 ? ? 113.58 108.30 5.28 0.30 N 5 1 C2 N DA 3 ? ? N3 N DA 3 ? ? C4 N DA 3 ? ? 107.35 110.60 -3.25 0.50 N 6 1 C5 N DA 3 ? ? C6 N DA 3 ? ? N1 N DA 3 ? ? 114.65 117.70 -3.05 0.50 N 7 1 "O4'" N DC 7 ? ? "C1'" N DC 7 ? ? N1 N DC 7 ? ? 112.82 108.30 4.52 0.30 N 8 1 "C3'" N DT 8 ? ? "O3'" N DT 8 ? ? P N DT 9 ? ? 128.29 119.70 8.59 1.20 Y 9 1 "O4'" N DT 9 ? ? "C1'" N DT 9 ? ? N1 N DT 9 ? ? 113.83 108.30 5.53 0.30 N 10 1 "O4'" N DG 10 ? ? "C1'" N DG 10 ? ? N9 N DG 10 ? ? 112.86 108.30 4.56 0.30 N 11 1 "C3'" N DG 10 ? ? "O3'" N DG 10 ? ? P N DC 11 ? ? 127.97 119.70 8.27 1.20 Y 12 1 "O4'" N DC 11 ? ? "C1'" N DC 11 ? ? N1 N DC 11 ? ? 111.15 108.30 2.85 0.30 N 13 1 C Z GLY 24 ? ? N Z ASN 25 ? ? CA Z ASN 25 ? ? 137.92 121.70 16.22 2.50 Y 14 1 CA Z ASN 25 ? ? CB Z ASN 25 ? ? CG Z ASN 25 ? ? 129.25 113.40 15.85 2.20 N 15 1 CA Z THR 44 ? ? CB Z THR 44 ? ? CG2 Z THR 44 ? ? 103.79 112.40 -8.61 1.40 N 16 1 CB Z ASP 99 ? ? CG Z ASP 99 ? ? OD2 Z ASP 99 ? ? 112.25 118.30 -6.05 0.90 N 17 1 CB Z ASP 113 ? ? CG Z ASP 113 ? ? OD2 Z ASP 113 ? ? 112.21 118.30 -6.09 0.90 N 18 1 CA Z MET 133 ? ? CB Z MET 133 ? ? CG Z MET 133 ? ? 97.82 113.30 -15.48 1.70 N 19 1 CB Z ASP 168 ? ? CG Z ASP 168 ? ? OD1 Z ASP 168 ? ? 125.43 118.30 7.13 0.90 N 20 1 C Z LYS 201 ? ? N Z PRO 202 ? ? CD Z PRO 202 ? ? 115.55 128.40 -12.85 2.10 Y 21 1 CA Z THR 203 ? ? CB Z THR 203 ? ? CG2 Z THR 203 ? ? 100.65 112.40 -11.75 1.40 N 22 1 C Z ILE 204 ? ? N Z PRO 205 ? ? CA Z PRO 205 ? ? 128.49 119.30 9.19 1.50 Y 23 1 C Z ILE 204 ? ? N Z PRO 205 ? ? CD Z PRO 205 ? ? 115.66 128.40 -12.74 2.10 Y 24 1 C Z ASP 237 ? ? N Z PRO 238 ? ? CD Z PRO 238 ? ? 114.95 128.40 -13.45 2.10 Y 25 1 CB Z ASP 240 ? ? CG Z ASP 240 ? ? OD1 Z ASP 240 ? ? 109.16 118.30 -9.14 0.90 N 26 1 CB Z ASP 240 ? ? CG Z ASP 240 ? ? OD2 Z ASP 240 ? ? 128.98 118.30 10.68 0.90 N 27 1 C Z VAL 250 ? ? N Z PRO 251 ? ? CD Z PRO 251 ? ? 102.05 128.40 -26.35 2.10 Y 28 1 CB Z ASP 259 ? ? CG Z ASP 259 ? ? OD2 Z ASP 259 ? ? 111.82 118.30 -6.48 0.90 N 29 1 CB Z ASP 269 ? ? CG Z ASP 269 ? ? OD1 Z ASP 269 ? ? 123.88 118.30 5.58 0.90 N 30 1 CB Z ASP 269 ? ? CG Z ASP 269 ? ? OD2 Z ASP 269 ? ? 112.04 118.30 -6.26 0.90 N 31 1 CB Z ASP 305 ? ? CG Z ASP 305 ? ? OD1 Z ASP 305 ? ? 112.85 118.30 -5.45 0.90 N 32 1 CB Z ASP 311 ? ? CG Z ASP 311 ? ? OD1 Z ASP 311 ? ? 112.35 118.30 -5.95 0.90 N 33 1 CB Z ASN 321 ? ? CA Z ASN 321 ? ? C Z ASN 321 ? ? 97.44 110.40 -12.96 2.00 N 34 1 NE Z ARG 332 ? ? CZ Z ARG 332 ? ? NH1 Z ARG 332 ? ? 123.66 120.30 3.36 0.50 N 35 1 CB Z ASP 367 ? ? CG Z ASP 367 ? ? OD1 Z ASP 367 ? ? 123.75 118.30 5.45 0.90 N 36 1 CB Z ASP 367 ? ? CG Z ASP 367 ? ? OD2 Z ASP 367 ? ? 112.68 118.30 -5.62 0.90 N 37 1 CB Z ASP 373 ? ? CG Z ASP 373 ? ? OD2 Z ASP 373 ? ? 112.49 118.30 -5.81 0.90 N 38 1 CB Z ASP 405 ? ? CG Z ASP 405 ? ? OD1 Z ASP 405 ? ? 125.76 118.30 7.46 0.90 N 39 1 C Z TYR 409 ? ? N Z PRO 410 ? ? CD Z PRO 410 ? ? 114.38 128.40 -14.02 2.10 Y 40 1 CB Z ASP 427 ? ? CG Z ASP 427 ? ? OD2 Z ASP 427 ? ? 112.26 118.30 -6.04 0.90 N 41 1 CB Z ASP 434 ? ? CG Z ASP 434 ? ? OD2 Z ASP 434 ? ? 110.47 118.30 -7.83 0.90 N 42 1 CB Z ASP 471 ? ? CG Z ASP 471 ? ? OD1 Z ASP 471 ? ? 125.11 118.30 6.81 0.90 N 43 1 CB Z ASP 471 ? ? CG Z ASP 471 ? ? OD2 Z ASP 471 ? ? 112.05 118.30 -6.25 0.90 N 44 1 CB Z ASP 477 ? ? CG Z ASP 477 ? ? OD2 Z ASP 477 ? ? 112.82 118.30 -5.48 0.90 N 45 1 NE Z ARG 481 ? ? CZ Z ARG 481 ? ? NH1 Z ARG 481 ? ? 123.65 120.30 3.35 0.50 N 46 1 CB Z ASP 513 ? ? CG Z ASP 513 ? ? OD2 Z ASP 513 ? ? 111.84 118.30 -6.46 0.90 N 47 1 NE Z ARG 520 ? ? CZ Z ARG 520 ? ? NH1 Z ARG 520 ? ? 123.41 120.30 3.11 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN Z 25 ? ? 112.58 -23.12 2 1 GLU Z 77 ? ? -82.75 43.06 3 1 ASN Z 86 ? ? -96.49 33.65 4 1 ASN Z 93 ? ? 91.83 98.58 5 1 ASN Z 95 ? ? -106.64 42.09 6 1 HIS Z 102 ? ? 177.22 165.48 7 1 ALA Z 116 ? ? -173.62 131.43 8 1 PRO Z 161 ? ? -65.13 74.14 9 1 LEU Z 218 ? ? -166.75 109.86 10 1 TRP Z 279 ? ? -141.02 -19.51 11 1 GLU Z 298 ? ? -66.72 -177.62 12 1 ALA Z 300 ? ? -81.70 35.15 13 1 ILE Z 330 ? ? -37.75 145.34 14 1 ALA Z 334 ? ? -166.00 -148.38 15 1 TYR Z 342 ? ? -173.40 148.04 16 1 THR Z 349 ? ? -39.13 -31.00 17 1 PHE Z 353 ? ? -170.28 144.99 18 1 ARG Z 361 ? ? -146.85 -88.50 19 1 THR Z 366 ? ? -124.21 -89.40 20 1 ASP Z 367 ? ? 72.24 43.98 21 1 GLU Z 368 ? ? 66.85 -14.02 22 1 ALA Z 371 ? ? -26.23 117.40 23 1 ALA Z 372 ? ? -128.69 -147.18 24 1 GLU Z 393 ? ? -81.16 43.05 25 1 LEU Z 457 ? ? -171.67 -176.54 26 1 ASP Z 475 ? ? -93.22 53.92 27 1 ASN Z 492 ? ? -89.37 -135.00 28 1 LYS Z 501 ? ? 178.93 147.11 29 1 GLN Z 558 ? ? -31.01 -32.30 30 1 ASN Z 565 ? ? -61.69 2.88 31 1 SER Z 576 ? ? -128.18 -50.66 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ASN _pdbx_validate_peptide_omega.auth_asym_id_1 Z _pdbx_validate_peptide_omega.auth_seq_id_1 25 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLY _pdbx_validate_peptide_omega.auth_asym_id_2 Z _pdbx_validate_peptide_omega.auth_seq_id_2 26 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -141.36 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id VAL _pdbx_validate_main_chain_plane.auth_asym_id Z _pdbx_validate_main_chain_plane.auth_seq_id 241 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle -10.35 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 N DA 1 ? N9 ? A DA 1 N9 2 1 Y 1 N DA 1 ? C8 ? A DA 1 C8 3 1 Y 1 N DA 1 ? N7 ? A DA 1 N7 4 1 Y 1 N DA 1 ? C5 ? A DA 1 C5 5 1 Y 1 N DA 1 ? C6 ? A DA 1 C6 6 1 Y 1 N DA 1 ? N6 ? A DA 1 N6 7 1 Y 1 N DA 1 ? C2 ? A DA 1 C2 8 1 Y 1 N DA 1 ? N3 ? A DA 1 N3 9 1 Y 1 N DA 1 ? C4 ? A DA 1 C4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 Z MET 1 ? B MET 1 2 1 Y 1 Z SER 2 ? B SER 2 3 1 Y 1 Z ASP 3 ? B ASP 3 4 1 Y 1 Z GLY 4 ? B GLY 4 5 1 Y 1 Z ALA 5 ? B ALA 5 6 1 Y 1 Z VAL 6 ? B VAL 6 7 1 Y 1 Z GLN 7 ? B GLN 7 8 1 Y 1 Z PRO 8 ? B PRO 8 9 1 Y 1 Z ASP 9 ? B ASP 9 10 1 Y 1 Z GLY 10 ? B GLY 10 11 1 Y 1 Z GLY 11 ? B GLY 11 12 1 Y 1 Z GLN 12 ? B GLN 12 13 1 Y 1 Z PRO 13 ? B PRO 13 14 1 Y 1 Z ALA 14 ? B ALA 14 15 1 Y 1 Z VAL 15 ? B VAL 15 16 1 Y 1 Z ARG 16 ? B ARG 16 17 1 Y 1 Z ASN 17 ? B ASN 17 18 1 Y 1 Z GLU 18 ? B GLU 18 19 1 Y 1 Z ARG 19 ? B ARG 19 20 1 Y 1 Z ALA 20 ? B ALA 20 21 1 Y 1 Z THR 21 ? B THR 21 22 1 Y 1 Z SER 156 ? B SER 156 23 1 Y 1 Z ALA 157 ? B ALA 157 24 1 Y 1 Z THR 158 ? B THR 158 25 1 Y 1 Z GLN 159 ? B GLN 159 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'MAGNESIUM ION' _pdbx_entity_nonpoly.comp_id MG #