data_4DVL # _entry.id 4DVL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DVL pdb_00004dvl 10.2210/pdb4dvl/pdb RCSB RCSB070837 ? ? WWPDB D_1000070837 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4DVK . unspecified PDB 4DVN . unspecified PDB 4DW3 . unspecified # _pdbx_database_status.entry_id 4DVL _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-02-23 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Krey, T.' 1 'Bontems, F.' 2 'Vonrhein, C.' 3 'Vaney, M.-C.' 4 'Bricogne, G.' 5 'Ruemenapf, T.' 6 'Rey, F.A.' 7 # _citation.id primary _citation.title 'Crystal Structure of the Pestivirus Envelope Glycoprotein E(rns) and Mechanistic Analysis of Its Ribonuclease Activity.' _citation.journal_abbrev Structure _citation.journal_volume 20 _citation.page_first 862 _citation.page_last 873 _citation.year 2012 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22579253 _citation.pdbx_database_id_DOI 10.1016/j.str.2012.03.018 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Krey, T.' 1 ? primary 'Bontems, F.' 2 ? primary 'Vonrhein, C.' 3 ? primary 'Vaney, M.C.' 4 ? primary 'Bricogne, G.' 5 ? primary 'Rumenapf, T.' 6 ? primary 'Rey, F.A.' 7 ? # _cell.entry_id 4DVL _cell.length_a 70.515 _cell.length_b 105.934 _cell.length_c 63.405 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DVL _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'E(rns) glycoprotein' 19005.492 2 ? ? 'N-terminal fragment' ? 2 branched man ;alpha-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 910.823 1 ? ? ? ? 3 branched man 'alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ? ? ? ? 4 branched man ;alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 748.682 1 ? ? ? ? 5 branched man ;beta-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 1072.964 1 ? ? ? ? 6 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 7 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 5 ? ? ? ? 8 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 9 non-polymer syn ;1-[(2S,3aS,4S,6R,6aR)-2-hydroxy-6-(hydroxymethyl)-2-oxidotetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]pyrimidine-2,4( 1H,3H)-dione ; 306.166 2 ? ? ? ? 10 water nat water 18.015 32 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;RSENITQWNLQDNGTEGIQRAMFQRGVNRSLHGIWPEKICTGVPSHLATDTELKAIHGMMDASEKTNYTCCRLQRHEWNK HGWCNWYNIEPWILLMNKTQANLTEGQPLRECAVTCRYDRDSDLNVVTQARDSPTPLTGCKKGKNFSFAGILVQGPCNFE IAVSDVL ; _entity_poly.pdbx_seq_one_letter_code_can ;RSENITQWNLQDNGTEGIQRAMFQRGVNRSLHGIWPEKICTGVPSHLATDTELKAIHGMMDASEKTNYTCCRLQRHEWNK HGWCNWYNIEPWILLMNKTQANLTEGQPLRECAVTCRYDRDSDLNVVTQARDSPTPLTGCKKGKNFSFAGILVQGPCNFE IAVSDVL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 SER n 1 3 GLU n 1 4 ASN n 1 5 ILE n 1 6 THR n 1 7 GLN n 1 8 TRP n 1 9 ASN n 1 10 LEU n 1 11 GLN n 1 12 ASP n 1 13 ASN n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 GLY n 1 18 ILE n 1 19 GLN n 1 20 ARG n 1 21 ALA n 1 22 MET n 1 23 PHE n 1 24 GLN n 1 25 ARG n 1 26 GLY n 1 27 VAL n 1 28 ASN n 1 29 ARG n 1 30 SER n 1 31 LEU n 1 32 HIS n 1 33 GLY n 1 34 ILE n 1 35 TRP n 1 36 PRO n 1 37 GLU n 1 38 LYS n 1 39 ILE n 1 40 CYS n 1 41 THR n 1 42 GLY n 1 43 VAL n 1 44 PRO n 1 45 SER n 1 46 HIS n 1 47 LEU n 1 48 ALA n 1 49 THR n 1 50 ASP n 1 51 THR n 1 52 GLU n 1 53 LEU n 1 54 LYS n 1 55 ALA n 1 56 ILE n 1 57 HIS n 1 58 GLY n 1 59 MET n 1 60 MET n 1 61 ASP n 1 62 ALA n 1 63 SER n 1 64 GLU n 1 65 LYS n 1 66 THR n 1 67 ASN n 1 68 TYR n 1 69 THR n 1 70 CYS n 1 71 CYS n 1 72 ARG n 1 73 LEU n 1 74 GLN n 1 75 ARG n 1 76 HIS n 1 77 GLU n 1 78 TRP n 1 79 ASN n 1 80 LYS n 1 81 HIS n 1 82 GLY n 1 83 TRP n 1 84 CYS n 1 85 ASN n 1 86 TRP n 1 87 TYR n 1 88 ASN n 1 89 ILE n 1 90 GLU n 1 91 PRO n 1 92 TRP n 1 93 ILE n 1 94 LEU n 1 95 LEU n 1 96 MET n 1 97 ASN n 1 98 LYS n 1 99 THR n 1 100 GLN n 1 101 ALA n 1 102 ASN n 1 103 LEU n 1 104 THR n 1 105 GLU n 1 106 GLY n 1 107 GLN n 1 108 PRO n 1 109 LEU n 1 110 ARG n 1 111 GLU n 1 112 CYS n 1 113 ALA n 1 114 VAL n 1 115 THR n 1 116 CYS n 1 117 ARG n 1 118 TYR n 1 119 ASP n 1 120 ARG n 1 121 ASP n 1 122 SER n 1 123 ASP n 1 124 LEU n 1 125 ASN n 1 126 VAL n 1 127 VAL n 1 128 THR n 1 129 GLN n 1 130 ALA n 1 131 ARG n 1 132 ASP n 1 133 SER n 1 134 PRO n 1 135 THR n 1 136 PRO n 1 137 LEU n 1 138 THR n 1 139 GLY n 1 140 CYS n 1 141 LYS n 1 142 LYS n 1 143 GLY n 1 144 LYS n 1 145 ASN n 1 146 PHE n 1 147 SER n 1 148 PHE n 1 149 ALA n 1 150 GLY n 1 151 ILE n 1 152 LEU n 1 153 VAL n 1 154 GLN n 1 155 GLY n 1 156 PRO n 1 157 CYS n 1 158 ASN n 1 159 PHE n 1 160 GLU n 1 161 ILE n 1 162 ALA n 1 163 VAL n 1 164 SER n 1 165 ASP n 1 166 VAL n 1 167 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name BVDV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Erns _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain CP7 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bovine viral diarrhea virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 268305 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7227 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMT-BIP-based _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POLG_BVDVC _struct_ref.pdbx_db_accession Q96662 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ENITQWNLQDNGTEGIQRAMFQRGVNRSLHGIWPEKICTGVPSHLATDTELKAIHGMMDASEKTNYTCCRLQRHEWNKHG WCNWYNIEPWILLMNKTQANLTEGQPLRECAVTCRYDRDSDLNVVTQARDSPTPLTGCKKGKNFSFAGILVQGPCNFEIA VSDVL ; _struct_ref.pdbx_align_begin 271 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4DVL A 3 ? 167 ? Q96662 271 ? 435 ? 3 167 2 1 4DVL B 3 ? 167 ? Q96662 271 ? 435 ? 3 167 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DVL ARG A 1 ? UNP Q96662 ? ? 'expression tag' 1 1 1 4DVL SER A 2 ? UNP Q96662 ? ? 'expression tag' 2 2 2 4DVL ARG B 1 ? UNP Q96662 ? ? 'expression tag' 1 3 2 4DVL SER B 2 ? UNP Q96662 ? ? 'expression tag' 2 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 JKM non-polymer . ;1-[(2S,3aS,4S,6R,6aR)-2-hydroxy-6-(hydroxymethyl)-2-oxidotetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]pyrimidine-2,4( 1H,3H)-dione ; ;Uridine 2',3'-cyclophosphate ; 'C9 H11 N2 O8 P' 306.166 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4DVL _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.12 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 60.51 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '33% PEG2000 MME, 100mM Na-Acetate, 140mM (NH4)2SO4, 50mM KH2PO4, pH 4.6, vapor diffusion, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-12-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Channel cut Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98011 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.pdbx_wavelength_list 0.98011 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SOLEIL _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' # _reflns.entry_id 4DVL _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 2.75 _reflns.d_resolution_low 35.31 _reflns.number_all 12837 _reflns.number_obs 11694 _reflns.percent_possible_obs 91.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.75 _reflns_shell.d_res_low 2.90 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 56.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4DVL _refine.ls_d_res_high 2.7500 _refine.ls_d_res_low 35.2600 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 90.5200 _refine.ls_number_reflns_obs 11659 _refine.ls_number_reflns_all 12798 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2015 _refine.ls_R_factor_R_work 0.1974 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2486 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 8.2300 _refine.ls_number_reflns_R_free 960 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 62.4101 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 7.3188 _refine.aniso_B[2][2] 18.5607 _refine.aniso_B[3][3] -25.8794 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.8945 _refine.correlation_coeff_Fo_to_Fc_free 0.8540 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB entry 4DVK' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 146.750 _refine.B_iso_min 27.660 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.150 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4DVL _refine_analyze.Luzzati_coordinate_error_obs 0.352 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2564 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 380 _refine_hist.number_atoms_solvent 32 _refine_hist.number_atoms_total 2976 _refine_hist.d_res_high 2.7500 _refine_hist.d_res_low 35.2600 # _refine_ls_shell.d_res_high 2.7500 _refine_ls_shell.d_res_low 3.0100 _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.percent_reflns_obs 90.5200 _refine_ls_shell.number_reflns_R_work 1800 _refine_ls_shell.R_factor_all 0.2441 _refine_ls_shell.R_factor_R_work 0.2366 _refine_ls_shell.R_factor_R_free 0.3370 _refine_ls_shell.percent_reflns_R_free 7.9800 _refine_ls_shell.number_reflns_R_free 156 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1956 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4DVL _struct.title ;Crystal structure of the glycoprotein Erns from the pestivirus BVDV-1 in complex with 2'-3'-cyclo-UMP ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DVL _struct_keywords.text 'virus glycoprotein, T2 Ribonuclease, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 7 ? I N N 7 ? J N N 8 ? K N N 8 ? L N N 9 ? M N N 7 ? N N N 7 ? O N N 7 ? P N N 8 ? Q N N 8 ? R N N 9 ? S N N 10 ? T N N 10 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 17 ? ARG A 25 ? GLY A 17 ARG A 25 1 ? 9 HELX_P HELX_P2 2 THR A 49 ? ALA A 55 ? THR A 49 ALA A 55 1 ? 7 HELX_P HELX_P3 3 SER A 63 ? ASN A 67 ? SER A 63 ASN A 67 5 ? 5 HELX_P HELX_P4 4 CYS A 71 ? GLY A 82 ? CYS A 71 GLY A 82 1 ? 12 HELX_P HELX_P5 5 GLY A 82 ? TYR A 87 ? GLY A 82 TYR A 87 1 ? 6 HELX_P HELX_P6 6 ASN A 88 ? GLY A 106 ? ASN A 88 GLY A 106 1 ? 19 HELX_P HELX_P7 7 GLY B 17 ? ARG B 25 ? GLY B 17 ARG B 25 1 ? 9 HELX_P HELX_P8 8 THR B 49 ? ALA B 55 ? THR B 49 ALA B 55 1 ? 7 HELX_P HELX_P9 9 SER B 63 ? ASN B 67 ? SER B 63 ASN B 67 5 ? 5 HELX_P HELX_P10 10 CYS B 71 ? GLY B 82 ? CYS B 71 GLY B 82 1 ? 12 HELX_P HELX_P11 11 GLY B 82 ? TYR B 87 ? GLY B 82 TYR B 87 1 ? 6 HELX_P HELX_P12 12 ASN B 88 ? GLY B 106 ? ASN B 88 GLY B 106 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 40 SG ? ? ? 1_555 A CYS 84 SG ? ? A CYS 40 A CYS 84 1_555 ? ? ? ? ? ? ? 2.054 ? ? disulf2 disulf ? ? A CYS 70 SG A ? ? 1_555 A CYS 71 SG A ? A CYS 70 A CYS 71 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf3 disulf ? ? A CYS 112 SG A ? ? 1_555 A CYS 157 SG A ? A CYS 112 A CYS 157 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf4 disulf ? ? A CYS 116 SG A ? ? 1_555 A CYS 140 SG A ? A CYS 116 A CYS 140 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf5 disulf ? ? A CYS 116 SG B ? ? 1_555 A CYS 140 SG B ? A CYS 116 A CYS 140 1_555 ? ? ? ? ? ? ? 2.695 ? ? disulf6 disulf ? ? B CYS 40 SG ? ? ? 1_555 B CYS 84 SG ? ? B CYS 40 B CYS 84 1_555 ? ? ? ? ? ? ? 2.055 ? ? disulf7 disulf ? ? B CYS 70 SG A ? ? 1_555 B CYS 71 SG A ? B CYS 70 B CYS 71 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf8 disulf ? ? B CYS 112 SG A ? ? 1_555 B CYS 157 SG A ? B CYS 112 B CYS 157 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf9 disulf ? ? B CYS 116 SG A ? ? 1_555 B CYS 140 SG A ? B CYS 116 B CYS 140 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf10 disulf ? ? B CYS 116 SG B ? ? 1_555 B CYS 140 SG B ? B CYS 116 B CYS 140 1_555 ? ? ? ? ? ? ? 2.689 ? ? covale1 covale one ? A ASN 4 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 4 C NAG 1 1_555 ? ? ? ? ? ? ? 1.465 ? N-Glycosylation covale2 covale one ? A ASN 13 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 13 E NAG 1 1_555 ? ? ? ? ? ? ? 1.431 ? N-Glycosylation covale3 covale one ? A ASN 28 ND2 ? ? ? 1_555 H NAG . C1 ? ? A ASN 28 A NAG 1106 1_555 ? ? ? ? ? ? ? 1.421 ? N-Glycosylation covale4 covale one ? A ASN 97 ND2 ? ? ? 1_555 I NAG . C1 ? ? A ASN 97 A NAG 1107 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale5 covale one ? A ASN 102 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 102 D NAG 1 1_555 ? ? ? ? ? ? ? 1.478 ? N-Glycosylation covale6 covale one ? B ASN 4 ND2 ? ? ? 1_555 F NAG . C1 ? ? B ASN 4 F NAG 1 1_555 ? ? ? ? ? ? ? 1.449 ? N-Glycosylation covale7 covale one ? B ASN 13 ND2 ? ? ? 1_555 O NAG . C1 ? ? B ASN 13 B NAG 1111 1_555 ? ? ? ? ? ? ? 1.460 ? N-Glycosylation covale8 covale one ? B ASN 28 ND2 ? ? ? 1_555 G NAG . C1 ? ? B ASN 28 G NAG 1 1_555 ? ? ? ? ? ? ? 1.498 ? N-Glycosylation covale9 covale one ? B ASN 97 ND2 ? ? ? 1_555 M NAG . C1 ? ? B ASN 97 B NAG 1109 1_555 ? ? ? ? ? ? ? 1.430 ? N-Glycosylation covale10 covale one ? B ASN 102 ND2 ? ? ? 1_555 N NAG . C1 ? ? B ASN 102 B NAG 1110 1_555 ? ? ? ? ? ? ? 1.465 ? N-Glycosylation covale11 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.387 ? ? covale12 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.414 ? ? covale13 covale both ? C BMA . O3 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.408 ? ? covale14 covale both ? C BMA . O6 ? ? ? 1_555 C BMA . C1 ? ? C BMA 3 C BMA 5 1_555 ? ? ? ? ? ? ? 1.452 ? ? covale15 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.484 ? ? covale16 covale both ? D NAG . O4 ? ? ? 1_555 D MAN . C1 ? ? D NAG 2 D MAN 3 1_555 ? ? ? ? ? ? ? 1.479 ? ? covale17 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.407 ? ? covale18 covale both ? E NAG . O4 ? ? ? 1_555 E BMA . C1 ? ? E NAG 2 E BMA 3 1_555 ? ? ? ? ? ? ? 1.394 ? ? covale19 covale both ? E BMA . O3 ? ? ? 1_555 E MAN . C1 ? ? E BMA 3 E MAN 4 1_555 ? ? ? ? ? ? ? 1.422 ? ? covale20 covale both ? F NAG . O4 ? ? ? 1_555 F NAG . C1 ? ? F NAG 1 F NAG 2 1_555 ? ? ? ? ? ? ? 1.416 ? ? covale21 covale both ? F NAG . O4 ? ? ? 1_555 F BMA . C1 ? ? F NAG 2 F BMA 3 1_555 ? ? ? ? ? ? ? 1.415 ? ? covale22 covale both ? F BMA . O3 ? ? ? 1_555 F MAN . C1 ? ? F BMA 3 F MAN 4 1_555 ? ? ? ? ? ? ? 1.403 ? ? covale23 covale both ? F BMA . O6 ? ? ? 1_555 F MAN . C1 ? ? F BMA 3 F MAN 6 1_555 ? ? ? ? ? ? ? 1.463 ? ? covale24 covale both ? F MAN . O2 ? ? ? 1_555 F BMA . C1 ? ? F MAN 4 F BMA 5 1_555 ? ? ? ? ? ? ? 1.469 ? ? covale25 covale both ? G NAG . O4 ? ? ? 1_555 G NAG . C1 ? ? G NAG 1 G NAG 2 1_555 ? ? ? ? ? ? ? 1.476 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 CYS 70 A . ? CYS 70 A CYS 71 A ? CYS 71 A 1 3.17 2 CYS 70 A . ? CYS 70 A CYS 71 A ? CYS 71 A 1 0.66 3 CYS 70 B . ? CYS 70 B CYS 71 B ? CYS 71 B 1 2.95 4 CYS 70 B . ? CYS 70 B CYS 71 B ? CYS 71 B 1 2.87 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 4 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 29 ? TRP A 35 ? ARG A 29 TRP A 35 A 2 ILE A 5 ? LEU A 10 ? ILE A 5 LEU A 10 A 3 LEU A 124 ? ARG A 131 ? LEU A 124 ARG A 131 A 4 CYS A 112 ? ASP A 119 ? CYS A 112 ASP A 119 B 1 ARG A 29 ? TRP A 35 ? ARG A 29 TRP A 35 B 2 ILE A 5 ? LEU A 10 ? ILE A 5 LEU A 10 B 3 LEU A 124 ? ARG A 131 ? LEU A 124 ARG A 131 B 4 ASN A 145 ? PHE A 148 ? ASN A 145 PHE A 148 B 5 ILE A 151 ? VAL A 153 ? ILE A 151 VAL A 153 C 1 ARG B 29 ? TRP B 35 ? ARG B 29 TRP B 35 C 2 ILE B 5 ? LEU B 10 ? ILE B 5 LEU B 10 C 3 LEU B 124 ? ARG B 131 ? LEU B 124 ARG B 131 C 4 CYS B 112 ? ASP B 119 ? CYS B 112 ASP B 119 D 1 ARG B 29 ? TRP B 35 ? ARG B 29 TRP B 35 D 2 ILE B 5 ? LEU B 10 ? ILE B 5 LEU B 10 D 3 LEU B 124 ? ARG B 131 ? LEU B 124 ARG B 131 D 4 ASN B 145 ? PHE B 148 ? ASN B 145 PHE B 148 D 5 ILE B 151 ? VAL B 153 ? ILE B 151 VAL B 153 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TRP A 35 ? O TRP A 35 N ILE A 5 ? N ILE A 5 A 2 3 N LEU A 10 ? N LEU A 10 O THR A 128 ? O THR A 128 A 3 4 O ARG A 131 ? O ARG A 131 N CYS A 112 ? N CYS A 112 B 1 2 O TRP A 35 ? O TRP A 35 N ILE A 5 ? N ILE A 5 B 2 3 N LEU A 10 ? N LEU A 10 O THR A 128 ? O THR A 128 B 3 4 N ASN A 125 ? N ASN A 125 O ASN A 145 ? O ASN A 145 B 4 5 N PHE A 146 ? N PHE A 146 O VAL A 153 ? O VAL A 153 C 1 2 O SER B 30 ? O SER B 30 N ASN B 9 ? N ASN B 9 C 2 3 N LEU B 10 ? N LEU B 10 O THR B 128 ? O THR B 128 C 3 4 O ARG B 131 ? O ARG B 131 N CYS B 112 ? N CYS B 112 D 1 2 O SER B 30 ? O SER B 30 N ASN B 9 ? N ASN B 9 D 2 3 N LEU B 10 ? N LEU B 10 O THR B 128 ? O THR B 128 D 3 4 N ASN B 125 ? N ASN B 125 O ASN B 145 ? O ASN B 145 D 4 5 N PHE B 146 ? N PHE B 146 O VAL B 153 ? O VAL B 153 # _atom_sites.entry_id 4DVL _atom_sites.fract_transf_matrix[1][1] 0.014181 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009440 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015772 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 TRP 8 8 8 TRP TRP A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 MET 22 22 22 MET MET A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 TRP 35 35 35 TRP TRP A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 CYS 40 40 40 CYS CYS A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 HIS 46 46 46 HIS HIS A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 HIS 57 57 57 HIS HIS A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 MET 59 59 59 MET MET A . n A 1 60 MET 60 60 60 MET MET A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 CYS 70 70 70 CYS CYS A . n A 1 71 CYS 71 71 71 CYS CYS A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 HIS 76 76 76 HIS HIS A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 TRP 78 78 78 TRP TRP A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 HIS 81 81 81 HIS HIS A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 TRP 83 83 83 TRP TRP A . n A 1 84 CYS 84 84 84 CYS CYS A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 TRP 86 86 86 TRP TRP A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 TRP 92 92 92 TRP TRP A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 MET 96 96 96 MET MET A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 GLN 100 100 100 GLN GLN A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 CYS 112 112 112 CYS CYS A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 CYS 116 116 116 CYS CYS A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 TYR 118 118 118 TYR TYR A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 ARG 120 120 120 ARG ARG A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ASN 125 125 125 ASN ASN A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 GLN 129 129 129 GLN GLN A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 ARG 131 131 131 ARG ARG A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 PRO 134 134 134 PRO PRO A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 THR 138 138 138 THR THR A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 CYS 140 140 140 CYS CYS A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 LYS 142 142 142 LYS LYS A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 ASN 145 145 145 ASN ASN A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 PHE 148 148 148 PHE PHE A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 GLN 154 154 154 GLN GLN A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 PRO 156 156 156 PRO PRO A . n A 1 157 CYS 157 157 157 CYS CYS A . n A 1 158 ASN 158 158 158 ASN ASN A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 GLU 160 160 160 GLU GLU A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 VAL 163 163 163 VAL VAL A . n A 1 164 SER 164 164 ? ? ? A . n A 1 165 ASP 165 165 ? ? ? A . n A 1 166 VAL 166 166 ? ? ? A . n A 1 167 LEU 167 167 ? ? ? A . n B 1 1 ARG 1 1 ? ? ? B . n B 1 2 SER 2 2 ? ? ? B . n B 1 3 GLU 3 3 3 GLU GLU B . n B 1 4 ASN 4 4 4 ASN ASN B . n B 1 5 ILE 5 5 5 ILE ILE B . n B 1 6 THR 6 6 6 THR THR B . n B 1 7 GLN 7 7 7 GLN GLN B . n B 1 8 TRP 8 8 8 TRP TRP B . n B 1 9 ASN 9 9 9 ASN ASN B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 GLN 11 11 11 GLN GLN B . n B 1 12 ASP 12 12 12 ASP ASP B . n B 1 13 ASN 13 13 13 ASN ASN B . n B 1 14 GLY 14 14 14 GLY GLY B . n B 1 15 THR 15 15 15 THR THR B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 ILE 18 18 18 ILE ILE B . n B 1 19 GLN 19 19 19 GLN GLN B . n B 1 20 ARG 20 20 20 ARG ARG B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 MET 22 22 22 MET MET B . n B 1 23 PHE 23 23 23 PHE PHE B . n B 1 24 GLN 24 24 24 GLN GLN B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 GLY 26 26 26 GLY GLY B . n B 1 27 VAL 27 27 27 VAL VAL B . n B 1 28 ASN 28 28 28 ASN ASN B . n B 1 29 ARG 29 29 29 ARG ARG B . n B 1 30 SER 30 30 30 SER SER B . n B 1 31 LEU 31 31 31 LEU LEU B . n B 1 32 HIS 32 32 32 HIS HIS B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 ILE 34 34 34 ILE ILE B . n B 1 35 TRP 35 35 35 TRP TRP B . n B 1 36 PRO 36 36 36 PRO PRO B . n B 1 37 GLU 37 37 37 GLU GLU B . n B 1 38 LYS 38 38 38 LYS LYS B . n B 1 39 ILE 39 39 39 ILE ILE B . n B 1 40 CYS 40 40 40 CYS CYS B . n B 1 41 THR 41 41 41 THR THR B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 VAL 43 43 43 VAL VAL B . n B 1 44 PRO 44 44 44 PRO PRO B . n B 1 45 SER 45 45 45 SER SER B . n B 1 46 HIS 46 46 46 HIS HIS B . n B 1 47 LEU 47 47 47 LEU LEU B . n B 1 48 ALA 48 48 48 ALA ALA B . n B 1 49 THR 49 49 49 THR THR B . n B 1 50 ASP 50 50 50 ASP ASP B . n B 1 51 THR 51 51 51 THR THR B . n B 1 52 GLU 52 52 52 GLU GLU B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 LYS 54 54 54 LYS LYS B . n B 1 55 ALA 55 55 55 ALA ALA B . n B 1 56 ILE 56 56 56 ILE ILE B . n B 1 57 HIS 57 57 57 HIS HIS B . n B 1 58 GLY 58 58 58 GLY GLY B . n B 1 59 MET 59 59 59 MET MET B . n B 1 60 MET 60 60 60 MET MET B . n B 1 61 ASP 61 61 61 ASP ASP B . n B 1 62 ALA 62 62 62 ALA ALA B . n B 1 63 SER 63 63 63 SER SER B . n B 1 64 GLU 64 64 64 GLU GLU B . n B 1 65 LYS 65 65 65 LYS LYS B . n B 1 66 THR 66 66 66 THR THR B . n B 1 67 ASN 67 67 67 ASN ASN B . n B 1 68 TYR 68 68 68 TYR TYR B . n B 1 69 THR 69 69 69 THR THR B . n B 1 70 CYS 70 70 70 CYS CYS B . n B 1 71 CYS 71 71 71 CYS CYS B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 LEU 73 73 73 LEU LEU B . n B 1 74 GLN 74 74 74 GLN GLN B . n B 1 75 ARG 75 75 75 ARG ARG B . n B 1 76 HIS 76 76 76 HIS HIS B . n B 1 77 GLU 77 77 77 GLU GLU B . n B 1 78 TRP 78 78 78 TRP TRP B . n B 1 79 ASN 79 79 79 ASN ASN B . n B 1 80 LYS 80 80 80 LYS LYS B . n B 1 81 HIS 81 81 81 HIS HIS B . n B 1 82 GLY 82 82 82 GLY GLY B . n B 1 83 TRP 83 83 83 TRP TRP B . n B 1 84 CYS 84 84 84 CYS CYS B . n B 1 85 ASN 85 85 85 ASN ASN B . n B 1 86 TRP 86 86 86 TRP TRP B . n B 1 87 TYR 87 87 87 TYR TYR B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 ILE 89 89 89 ILE ILE B . n B 1 90 GLU 90 90 90 GLU GLU B . n B 1 91 PRO 91 91 91 PRO PRO B . n B 1 92 TRP 92 92 92 TRP TRP B . n B 1 93 ILE 93 93 93 ILE ILE B . n B 1 94 LEU 94 94 94 LEU LEU B . n B 1 95 LEU 95 95 95 LEU LEU B . n B 1 96 MET 96 96 96 MET MET B . n B 1 97 ASN 97 97 97 ASN ASN B . n B 1 98 LYS 98 98 98 LYS LYS B . n B 1 99 THR 99 99 99 THR THR B . n B 1 100 GLN 100 100 100 GLN GLN B . n B 1 101 ALA 101 101 101 ALA ALA B . n B 1 102 ASN 102 102 102 ASN ASN B . n B 1 103 LEU 103 103 103 LEU LEU B . n B 1 104 THR 104 104 104 THR THR B . n B 1 105 GLU 105 105 105 GLU GLU B . n B 1 106 GLY 106 106 106 GLY GLY B . n B 1 107 GLN 107 107 107 GLN GLN B . n B 1 108 PRO 108 108 108 PRO PRO B . n B 1 109 LEU 109 109 109 LEU LEU B . n B 1 110 ARG 110 110 110 ARG ARG B . n B 1 111 GLU 111 111 111 GLU GLU B . n B 1 112 CYS 112 112 112 CYS CYS B . n B 1 113 ALA 113 113 113 ALA ALA B . n B 1 114 VAL 114 114 114 VAL VAL B . n B 1 115 THR 115 115 115 THR THR B . n B 1 116 CYS 116 116 116 CYS CYS B . n B 1 117 ARG 117 117 117 ARG ARG B . n B 1 118 TYR 118 118 118 TYR TYR B . n B 1 119 ASP 119 119 119 ASP ASP B . n B 1 120 ARG 120 120 120 ARG ARG B . n B 1 121 ASP 121 121 121 ASP ASP B . n B 1 122 SER 122 122 122 SER SER B . n B 1 123 ASP 123 123 123 ASP ASP B . n B 1 124 LEU 124 124 124 LEU LEU B . n B 1 125 ASN 125 125 125 ASN ASN B . n B 1 126 VAL 126 126 126 VAL VAL B . n B 1 127 VAL 127 127 127 VAL VAL B . n B 1 128 THR 128 128 128 THR THR B . n B 1 129 GLN 129 129 129 GLN GLN B . n B 1 130 ALA 130 130 130 ALA ALA B . n B 1 131 ARG 131 131 131 ARG ARG B . n B 1 132 ASP 132 132 132 ASP ASP B . n B 1 133 SER 133 133 133 SER SER B . n B 1 134 PRO 134 134 134 PRO PRO B . n B 1 135 THR 135 135 135 THR THR B . n B 1 136 PRO 136 136 136 PRO PRO B . n B 1 137 LEU 137 137 137 LEU LEU B . n B 1 138 THR 138 138 138 THR THR B . n B 1 139 GLY 139 139 139 GLY GLY B . n B 1 140 CYS 140 140 140 CYS CYS B . n B 1 141 LYS 141 141 141 LYS LYS B . n B 1 142 LYS 142 142 142 LYS LYS B . n B 1 143 GLY 143 143 143 GLY GLY B . n B 1 144 LYS 144 144 144 LYS LYS B . n B 1 145 ASN 145 145 145 ASN ASN B . n B 1 146 PHE 146 146 146 PHE PHE B . n B 1 147 SER 147 147 147 SER SER B . n B 1 148 PHE 148 148 148 PHE PHE B . n B 1 149 ALA 149 149 149 ALA ALA B . n B 1 150 GLY 150 150 150 GLY GLY B . n B 1 151 ILE 151 151 151 ILE ILE B . n B 1 152 LEU 152 152 152 LEU LEU B . n B 1 153 VAL 153 153 153 VAL VAL B . n B 1 154 GLN 154 154 154 GLN GLN B . n B 1 155 GLY 155 155 155 GLY GLY B . n B 1 156 PRO 156 156 156 PRO PRO B . n B 1 157 CYS 157 157 157 CYS CYS B . n B 1 158 ASN 158 158 158 ASN ASN B . n B 1 159 PHE 159 159 159 PHE PHE B . n B 1 160 GLU 160 160 160 GLU GLU B . n B 1 161 ILE 161 161 161 ILE ILE B . n B 1 162 ALA 162 162 162 ALA ALA B . n B 1 163 VAL 163 163 163 VAL VAL B . n B 1 164 SER 164 164 ? ? ? B . n B 1 165 ASP 165 165 ? ? ? B . n B 1 166 VAL 166 166 ? ? ? B . n B 1 167 LEU 167 167 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code H 7 NAG 1 1106 1201 NAG NAG A . I 7 NAG 1 1107 1401 NAG NAG A . J 8 SO4 1 1115 3 SO4 SO4 A . K 8 SO4 1 1116 4 SO4 SO4 A . L 9 JKM 1 1117 1 JKM LIG A . M 7 NAG 1 1109 1401 NAG NAG B . N 7 NAG 1 1110 1501 NAG NAG B . O 7 NAG 1 1111 1601 NAG NAG B . P 8 SO4 1 1112 1 SO4 SO4 B . Q 8 SO4 1 1113 2 SO4 SO4 B . R 9 JKM 1 1114 1 JKM LIG B . S 10 HOH 1 1201 2 HOH HOH A . S 10 HOH 2 1202 5 HOH HOH A . S 10 HOH 3 1203 6 HOH HOH A . S 10 HOH 4 1204 7 HOH HOH A . S 10 HOH 5 1205 10 HOH HOH A . S 10 HOH 6 1206 14 HOH HOH A . S 10 HOH 7 1207 15 HOH HOH A . S 10 HOH 8 1208 21 HOH HOH A . S 10 HOH 9 1209 22 HOH HOH A . S 10 HOH 10 1210 24 HOH HOH A . S 10 HOH 11 1211 29 HOH HOH A . S 10 HOH 12 1212 31 HOH HOH A . S 10 HOH 13 1213 34 HOH HOH A . S 10 HOH 14 1214 36 HOH HOH A . S 10 HOH 15 1215 40 HOH HOH A . S 10 HOH 16 1216 42 HOH HOH A . S 10 HOH 17 1217 46 HOH HOH A . S 10 HOH 18 1218 47 HOH HOH A . S 10 HOH 19 1219 53 HOH HOH A . S 10 HOH 20 1220 56 HOH HOH A . S 10 HOH 21 1221 58 HOH HOH A . S 10 HOH 22 1222 62 HOH HOH A . S 10 HOH 23 1223 65 HOH HOH A . T 10 HOH 1 1201 1 HOH HOH B . T 10 HOH 2 1202 18 HOH HOH B . T 10 HOH 3 1203 19 HOH HOH B . T 10 HOH 4 1204 25 HOH HOH B . T 10 HOH 5 1205 28 HOH HOH B . T 10 HOH 6 1206 35 HOH HOH B . T 10 HOH 7 1207 45 HOH HOH B . T 10 HOH 8 1208 60 HOH HOH B . T 10 HOH 9 1209 63 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 28 A ASN 28 ? ASN 'GLYCOSYLATION SITE' 2 B ASN 97 B ASN 97 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 13 A ASN 13 ? ASN 'GLYCOSYLATION SITE' 4 A ASN 97 A ASN 97 ? ASN 'GLYCOSYLATION SITE' 5 B ASN 4 B ASN 4 ? ASN 'GLYCOSYLATION SITE' 6 B ASN 13 B ASN 13 ? ASN 'GLYCOSYLATION SITE' 7 A ASN 4 A ASN 4 ? ASN 'GLYCOSYLATION SITE' 8 B ASN 102 B ASN 102 ? ASN 'GLYCOSYLATION SITE' 9 A ASN 102 A ASN 102 ? ASN 'GLYCOSYLATION SITE' 10 B ASN 28 B ASN 28 ? ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,H,I,J,K,L,S 2 1 B,F,G,M,N,O,P,Q,R,T # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-23 2 'Structure model' 2 0 2020-07-29 3 'Structure model' 2 1 2023-09-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Atomic model' 3 2 'Structure model' 'Data collection' 4 2 'Structure model' 'Database references' 5 2 'Structure model' 'Derived calculations' 6 2 'Structure model' 'Structure summary' 7 3 'Structure model' 'Data collection' 8 3 'Structure model' 'Database references' 9 3 'Structure model' 'Refinement description' 10 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' pdbx_branch_scheme 5 2 'Structure model' pdbx_chem_comp_identifier 6 2 'Structure model' pdbx_entity_branch 7 2 'Structure model' pdbx_entity_branch_descriptor 8 2 'Structure model' pdbx_entity_branch_link 9 2 'Structure model' pdbx_entity_branch_list 10 2 'Structure model' pdbx_entity_nonpoly 11 2 'Structure model' pdbx_nonpoly_scheme 12 2 'Structure model' pdbx_struct_assembly_gen 13 2 'Structure model' pdbx_validate_close_contact 14 2 'Structure model' struct_asym 15 2 'Structure model' struct_conn 16 2 'Structure model' struct_ref_seq_dif 17 2 'Structure model' struct_site 18 2 'Structure model' struct_site_gen 19 3 'Structure model' chem_comp 20 3 'Structure model' chem_comp_atom 21 3 'Structure model' chem_comp_bond 22 3 'Structure model' database_2 23 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_atom_id' 7 2 'Structure model' '_atom_site.auth_comp_id' 8 2 'Structure model' '_atom_site.auth_seq_id' 9 2 'Structure model' '_atom_site.label_asym_id' 10 2 'Structure model' '_atom_site.label_atom_id' 11 2 'Structure model' '_atom_site.label_comp_id' 12 2 'Structure model' '_atom_site.label_entity_id' 13 2 'Structure model' '_atom_site.occupancy' 14 2 'Structure model' '_atom_site.type_symbol' 15 2 'Structure model' '_chem_comp.name' 16 2 'Structure model' '_chem_comp.type' 17 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 18 2 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 19 2 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 20 2 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 21 2 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 22 2 'Structure model' '_struct_conn.pdbx_dist_value' 23 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 2 'Structure model' '_struct_conn.pdbx_role' 25 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 2 'Structure model' '_struct_ref_seq_dif.details' 38 3 'Structure model' '_chem_comp.pdbx_synonyms' 39 3 'Structure model' '_database_2.pdbx_DOI' 40 3 'Structure model' '_database_2.pdbx_database_accession' # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA . ? other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data scaling' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 BUSTER 2.9.2 ? ? ? ? refinement ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O4 _pdbx_validate_close_contact.auth_asym_id_1 C _pdbx_validate_close_contact.auth_comp_id_1 NAG _pdbx_validate_close_contact.auth_seq_id_1 1 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O5 _pdbx_validate_close_contact.auth_asym_id_2 C _pdbx_validate_close_contact.auth_comp_id_2 NAG _pdbx_validate_close_contact.auth_seq_id_2 2 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 12 ? ? -163.14 110.37 2 1 THR A 69 ? ? -121.49 -82.91 3 1 TYR A 87 ? ? 69.23 -42.90 4 1 ASN A 158 ? ? -93.16 31.29 5 1 ASP B 12 ? ? -161.55 110.61 6 1 THR B 69 ? ? -123.32 -80.31 7 1 TYR B 87 ? ? 70.32 -45.09 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 1 ? A ARG 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A SER 164 ? A SER 164 4 1 Y 1 A ASP 165 ? A ASP 165 5 1 Y 1 A VAL 166 ? A VAL 166 6 1 Y 1 A LEU 167 ? A LEU 167 7 1 Y 1 B ARG 1 ? B ARG 1 8 1 Y 1 B SER 2 ? B SER 2 9 1 Y 1 B SER 164 ? B SER 164 10 1 Y 1 B ASP 165 ? B ASP 165 11 1 Y 1 B VAL 166 ? B VAL 166 12 1 Y 1 B LEU 167 ? B LEU 167 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 JKM P P N N 207 JKM N1 N N N 208 JKM C2 C N N 209 JKM O2 O N N 210 JKM N3 N N N 211 JKM C4 C N N 212 JKM O4 O N N 213 JKM C5 C N N 214 JKM C6 C N N 215 JKM "C1'" C N S 216 JKM "C2'" C N S 217 JKM "O2'" O N N 218 JKM O20 O N N 219 JKM O2P O N N 220 JKM "C3'" C N R 221 JKM O3P O N N 222 JKM "C4'" C N R 223 JKM "O4'" O N N 224 JKM "C5'" C N N 225 JKM "O5'" O N N 226 JKM H5 H N N 227 JKM H6 H N N 228 JKM "H1'" H N N 229 JKM "H2'" H N N 230 JKM HO2P H N N 231 JKM "H3'" H N N 232 JKM "H4'" H N N 233 JKM "H5'" H N N 234 JKM "H5'A" H N N 235 JKM "HO5'" H N N 236 JKM HN3 H N N 237 LEU N N N N 238 LEU CA C N S 239 LEU C C N N 240 LEU O O N N 241 LEU CB C N N 242 LEU CG C N N 243 LEU CD1 C N N 244 LEU CD2 C N N 245 LEU OXT O N N 246 LEU H H N N 247 LEU H2 H N N 248 LEU HA H N N 249 LEU HB2 H N N 250 LEU HB3 H N N 251 LEU HG H N N 252 LEU HD11 H N N 253 LEU HD12 H N N 254 LEU HD13 H N N 255 LEU HD21 H N N 256 LEU HD22 H N N 257 LEU HD23 H N N 258 LEU HXT H N N 259 LYS N N N N 260 LYS CA C N S 261 LYS C C N N 262 LYS O O N N 263 LYS CB C N N 264 LYS CG C N N 265 LYS CD C N N 266 LYS CE C N N 267 LYS NZ N N N 268 LYS OXT O N N 269 LYS H H N N 270 LYS H2 H N N 271 LYS HA H N N 272 LYS HB2 H N N 273 LYS HB3 H N N 274 LYS HG2 H N N 275 LYS HG3 H N N 276 LYS HD2 H N N 277 LYS HD3 H N N 278 LYS HE2 H N N 279 LYS HE3 H N N 280 LYS HZ1 H N N 281 LYS HZ2 H N N 282 LYS HZ3 H N N 283 LYS HXT H N N 284 MAN C1 C N S 285 MAN C2 C N S 286 MAN C3 C N S 287 MAN C4 C N S 288 MAN C5 C N R 289 MAN C6 C N N 290 MAN O1 O N N 291 MAN O2 O N N 292 MAN O3 O N N 293 MAN O4 O N N 294 MAN O5 O N N 295 MAN O6 O N N 296 MAN H1 H N N 297 MAN H2 H N N 298 MAN H3 H N N 299 MAN H4 H N N 300 MAN H5 H N N 301 MAN H61 H N N 302 MAN H62 H N N 303 MAN HO1 H N N 304 MAN HO2 H N N 305 MAN HO3 H N N 306 MAN HO4 H N N 307 MAN HO6 H N N 308 MET N N N N 309 MET CA C N S 310 MET C C N N 311 MET O O N N 312 MET CB C N N 313 MET CG C N N 314 MET SD S N N 315 MET CE C N N 316 MET OXT O N N 317 MET H H N N 318 MET H2 H N N 319 MET HA H N N 320 MET HB2 H N N 321 MET HB3 H N N 322 MET HG2 H N N 323 MET HG3 H N N 324 MET HE1 H N N 325 MET HE2 H N N 326 MET HE3 H N N 327 MET HXT H N N 328 NAG C1 C N R 329 NAG C2 C N R 330 NAG C3 C N R 331 NAG C4 C N S 332 NAG C5 C N R 333 NAG C6 C N N 334 NAG C7 C N N 335 NAG C8 C N N 336 NAG N2 N N N 337 NAG O1 O N N 338 NAG O3 O N N 339 NAG O4 O N N 340 NAG O5 O N N 341 NAG O6 O N N 342 NAG O7 O N N 343 NAG H1 H N N 344 NAG H2 H N N 345 NAG H3 H N N 346 NAG H4 H N N 347 NAG H5 H N N 348 NAG H61 H N N 349 NAG H62 H N N 350 NAG H81 H N N 351 NAG H82 H N N 352 NAG H83 H N N 353 NAG HN2 H N N 354 NAG HO1 H N N 355 NAG HO3 H N N 356 NAG HO4 H N N 357 NAG HO6 H N N 358 PHE N N N N 359 PHE CA C N S 360 PHE C C N N 361 PHE O O N N 362 PHE CB C N N 363 PHE CG C Y N 364 PHE CD1 C Y N 365 PHE CD2 C Y N 366 PHE CE1 C Y N 367 PHE CE2 C Y N 368 PHE CZ C Y N 369 PHE OXT O N N 370 PHE H H N N 371 PHE H2 H N N 372 PHE HA H N N 373 PHE HB2 H N N 374 PHE HB3 H N N 375 PHE HD1 H N N 376 PHE HD2 H N N 377 PHE HE1 H N N 378 PHE HE2 H N N 379 PHE HZ H N N 380 PHE HXT H N N 381 PRO N N N N 382 PRO CA C N S 383 PRO C C N N 384 PRO O O N N 385 PRO CB C N N 386 PRO CG C N N 387 PRO CD C N N 388 PRO OXT O N N 389 PRO H H N N 390 PRO HA H N N 391 PRO HB2 H N N 392 PRO HB3 H N N 393 PRO HG2 H N N 394 PRO HG3 H N N 395 PRO HD2 H N N 396 PRO HD3 H N N 397 PRO HXT H N N 398 SER N N N N 399 SER CA C N S 400 SER C C N N 401 SER O O N N 402 SER CB C N N 403 SER OG O N N 404 SER OXT O N N 405 SER H H N N 406 SER H2 H N N 407 SER HA H N N 408 SER HB2 H N N 409 SER HB3 H N N 410 SER HG H N N 411 SER HXT H N N 412 SO4 S S N N 413 SO4 O1 O N N 414 SO4 O2 O N N 415 SO4 O3 O N N 416 SO4 O4 O N N 417 THR N N N N 418 THR CA C N S 419 THR C C N N 420 THR O O N N 421 THR CB C N R 422 THR OG1 O N N 423 THR CG2 C N N 424 THR OXT O N N 425 THR H H N N 426 THR H2 H N N 427 THR HA H N N 428 THR HB H N N 429 THR HG1 H N N 430 THR HG21 H N N 431 THR HG22 H N N 432 THR HG23 H N N 433 THR HXT H N N 434 TRP N N N N 435 TRP CA C N S 436 TRP C C N N 437 TRP O O N N 438 TRP CB C N N 439 TRP CG C Y N 440 TRP CD1 C Y N 441 TRP CD2 C Y N 442 TRP NE1 N Y N 443 TRP CE2 C Y N 444 TRP CE3 C Y N 445 TRP CZ2 C Y N 446 TRP CZ3 C Y N 447 TRP CH2 C Y N 448 TRP OXT O N N 449 TRP H H N N 450 TRP H2 H N N 451 TRP HA H N N 452 TRP HB2 H N N 453 TRP HB3 H N N 454 TRP HD1 H N N 455 TRP HE1 H N N 456 TRP HE3 H N N 457 TRP HZ2 H N N 458 TRP HZ3 H N N 459 TRP HH2 H N N 460 TRP HXT H N N 461 TYR N N N N 462 TYR CA C N S 463 TYR C C N N 464 TYR O O N N 465 TYR CB C N N 466 TYR CG C Y N 467 TYR CD1 C Y N 468 TYR CD2 C Y N 469 TYR CE1 C Y N 470 TYR CE2 C Y N 471 TYR CZ C Y N 472 TYR OH O N N 473 TYR OXT O N N 474 TYR H H N N 475 TYR H2 H N N 476 TYR HA H N N 477 TYR HB2 H N N 478 TYR HB3 H N N 479 TYR HD1 H N N 480 TYR HD2 H N N 481 TYR HE1 H N N 482 TYR HE2 H N N 483 TYR HH H N N 484 TYR HXT H N N 485 VAL N N N N 486 VAL CA C N S 487 VAL C C N N 488 VAL O O N N 489 VAL CB C N N 490 VAL CG1 C N N 491 VAL CG2 C N N 492 VAL OXT O N N 493 VAL H H N N 494 VAL H2 H N N 495 VAL HA H N N 496 VAL HB H N N 497 VAL HG11 H N N 498 VAL HG12 H N N 499 VAL HG13 H N N 500 VAL HG21 H N N 501 VAL HG22 H N N 502 VAL HG23 H N N 503 VAL HXT H N N 504 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 HOH O H1 sing N N 174 HOH O H2 sing N N 175 ILE N CA sing N N 176 ILE N H sing N N 177 ILE N H2 sing N N 178 ILE CA C sing N N 179 ILE CA CB sing N N 180 ILE CA HA sing N N 181 ILE C O doub N N 182 ILE C OXT sing N N 183 ILE CB CG1 sing N N 184 ILE CB CG2 sing N N 185 ILE CB HB sing N N 186 ILE CG1 CD1 sing N N 187 ILE CG1 HG12 sing N N 188 ILE CG1 HG13 sing N N 189 ILE CG2 HG21 sing N N 190 ILE CG2 HG22 sing N N 191 ILE CG2 HG23 sing N N 192 ILE CD1 HD11 sing N N 193 ILE CD1 HD12 sing N N 194 ILE CD1 HD13 sing N N 195 ILE OXT HXT sing N N 196 JKM O20 P sing N N 197 JKM O3P P doub N N 198 JKM P O2P sing N N 199 JKM P "O2'" sing N N 200 JKM "C1'" N1 sing N N 201 JKM C2 N1 sing N N 202 JKM N1 C6 sing N N 203 JKM O2 C2 doub N N 204 JKM C2 N3 sing N N 205 JKM N3 C4 sing N N 206 JKM C4 C5 sing N N 207 JKM C4 O4 doub N N 208 JKM C6 C5 doub N N 209 JKM C5 H5 sing N N 210 JKM C6 H6 sing N N 211 JKM "O4'" "C1'" sing N N 212 JKM "C2'" "C1'" sing N N 213 JKM "C1'" "H1'" sing N N 214 JKM "C3'" "C2'" sing N N 215 JKM "C2'" "O2'" sing N N 216 JKM "C2'" "H2'" sing N N 217 JKM O20 "C3'" sing N N 218 JKM O2P HO2P sing N N 219 JKM "C4'" "C3'" sing N N 220 JKM "C3'" "H3'" sing N N 221 JKM "C4'" "C5'" sing N N 222 JKM "C4'" "O4'" sing N N 223 JKM "C4'" "H4'" sing N N 224 JKM "O5'" "C5'" sing N N 225 JKM "C5'" "H5'" sing N N 226 JKM "C5'" "H5'A" sing N N 227 JKM "O5'" "HO5'" sing N N 228 JKM N3 HN3 sing N N 229 LEU N CA sing N N 230 LEU N H sing N N 231 LEU N H2 sing N N 232 LEU CA C sing N N 233 LEU CA CB sing N N 234 LEU CA HA sing N N 235 LEU C O doub N N 236 LEU C OXT sing N N 237 LEU CB CG sing N N 238 LEU CB HB2 sing N N 239 LEU CB HB3 sing N N 240 LEU CG CD1 sing N N 241 LEU CG CD2 sing N N 242 LEU CG HG sing N N 243 LEU CD1 HD11 sing N N 244 LEU CD1 HD12 sing N N 245 LEU CD1 HD13 sing N N 246 LEU CD2 HD21 sing N N 247 LEU CD2 HD22 sing N N 248 LEU CD2 HD23 sing N N 249 LEU OXT HXT sing N N 250 LYS N CA sing N N 251 LYS N H sing N N 252 LYS N H2 sing N N 253 LYS CA C sing N N 254 LYS CA CB sing N N 255 LYS CA HA sing N N 256 LYS C O doub N N 257 LYS C OXT sing N N 258 LYS CB CG sing N N 259 LYS CB HB2 sing N N 260 LYS CB HB3 sing N N 261 LYS CG CD sing N N 262 LYS CG HG2 sing N N 263 LYS CG HG3 sing N N 264 LYS CD CE sing N N 265 LYS CD HD2 sing N N 266 LYS CD HD3 sing N N 267 LYS CE NZ sing N N 268 LYS CE HE2 sing N N 269 LYS CE HE3 sing N N 270 LYS NZ HZ1 sing N N 271 LYS NZ HZ2 sing N N 272 LYS NZ HZ3 sing N N 273 LYS OXT HXT sing N N 274 MAN C1 C2 sing N N 275 MAN C1 O1 sing N N 276 MAN C1 O5 sing N N 277 MAN C1 H1 sing N N 278 MAN C2 C3 sing N N 279 MAN C2 O2 sing N N 280 MAN C2 H2 sing N N 281 MAN C3 C4 sing N N 282 MAN C3 O3 sing N N 283 MAN C3 H3 sing N N 284 MAN C4 C5 sing N N 285 MAN C4 O4 sing N N 286 MAN C4 H4 sing N N 287 MAN C5 C6 sing N N 288 MAN C5 O5 sing N N 289 MAN C5 H5 sing N N 290 MAN C6 O6 sing N N 291 MAN C6 H61 sing N N 292 MAN C6 H62 sing N N 293 MAN O1 HO1 sing N N 294 MAN O2 HO2 sing N N 295 MAN O3 HO3 sing N N 296 MAN O4 HO4 sing N N 297 MAN O6 HO6 sing N N 298 MET N CA sing N N 299 MET N H sing N N 300 MET N H2 sing N N 301 MET CA C sing N N 302 MET CA CB sing N N 303 MET CA HA sing N N 304 MET C O doub N N 305 MET C OXT sing N N 306 MET CB CG sing N N 307 MET CB HB2 sing N N 308 MET CB HB3 sing N N 309 MET CG SD sing N N 310 MET CG HG2 sing N N 311 MET CG HG3 sing N N 312 MET SD CE sing N N 313 MET CE HE1 sing N N 314 MET CE HE2 sing N N 315 MET CE HE3 sing N N 316 MET OXT HXT sing N N 317 NAG C1 C2 sing N N 318 NAG C1 O1 sing N N 319 NAG C1 O5 sing N N 320 NAG C1 H1 sing N N 321 NAG C2 C3 sing N N 322 NAG C2 N2 sing N N 323 NAG C2 H2 sing N N 324 NAG C3 C4 sing N N 325 NAG C3 O3 sing N N 326 NAG C3 H3 sing N N 327 NAG C4 C5 sing N N 328 NAG C4 O4 sing N N 329 NAG C4 H4 sing N N 330 NAG C5 C6 sing N N 331 NAG C5 O5 sing N N 332 NAG C5 H5 sing N N 333 NAG C6 O6 sing N N 334 NAG C6 H61 sing N N 335 NAG C6 H62 sing N N 336 NAG C7 C8 sing N N 337 NAG C7 N2 sing N N 338 NAG C7 O7 doub N N 339 NAG C8 H81 sing N N 340 NAG C8 H82 sing N N 341 NAG C8 H83 sing N N 342 NAG N2 HN2 sing N N 343 NAG O1 HO1 sing N N 344 NAG O3 HO3 sing N N 345 NAG O4 HO4 sing N N 346 NAG O6 HO6 sing N N 347 PHE N CA sing N N 348 PHE N H sing N N 349 PHE N H2 sing N N 350 PHE CA C sing N N 351 PHE CA CB sing N N 352 PHE CA HA sing N N 353 PHE C O doub N N 354 PHE C OXT sing N N 355 PHE CB CG sing N N 356 PHE CB HB2 sing N N 357 PHE CB HB3 sing N N 358 PHE CG CD1 doub Y N 359 PHE CG CD2 sing Y N 360 PHE CD1 CE1 sing Y N 361 PHE CD1 HD1 sing N N 362 PHE CD2 CE2 doub Y N 363 PHE CD2 HD2 sing N N 364 PHE CE1 CZ doub Y N 365 PHE CE1 HE1 sing N N 366 PHE CE2 CZ sing Y N 367 PHE CE2 HE2 sing N N 368 PHE CZ HZ sing N N 369 PHE OXT HXT sing N N 370 PRO N CA sing N N 371 PRO N CD sing N N 372 PRO N H sing N N 373 PRO CA C sing N N 374 PRO CA CB sing N N 375 PRO CA HA sing N N 376 PRO C O doub N N 377 PRO C OXT sing N N 378 PRO CB CG sing N N 379 PRO CB HB2 sing N N 380 PRO CB HB3 sing N N 381 PRO CG CD sing N N 382 PRO CG HG2 sing N N 383 PRO CG HG3 sing N N 384 PRO CD HD2 sing N N 385 PRO CD HD3 sing N N 386 PRO OXT HXT sing N N 387 SER N CA sing N N 388 SER N H sing N N 389 SER N H2 sing N N 390 SER CA C sing N N 391 SER CA CB sing N N 392 SER CA HA sing N N 393 SER C O doub N N 394 SER C OXT sing N N 395 SER CB OG sing N N 396 SER CB HB2 sing N N 397 SER CB HB3 sing N N 398 SER OG HG sing N N 399 SER OXT HXT sing N N 400 SO4 S O1 doub N N 401 SO4 S O2 doub N N 402 SO4 S O3 sing N N 403 SO4 S O4 sing N N 404 THR N CA sing N N 405 THR N H sing N N 406 THR N H2 sing N N 407 THR CA C sing N N 408 THR CA CB sing N N 409 THR CA HA sing N N 410 THR C O doub N N 411 THR C OXT sing N N 412 THR CB OG1 sing N N 413 THR CB CG2 sing N N 414 THR CB HB sing N N 415 THR OG1 HG1 sing N N 416 THR CG2 HG21 sing N N 417 THR CG2 HG22 sing N N 418 THR CG2 HG23 sing N N 419 THR OXT HXT sing N N 420 TRP N CA sing N N 421 TRP N H sing N N 422 TRP N H2 sing N N 423 TRP CA C sing N N 424 TRP CA CB sing N N 425 TRP CA HA sing N N 426 TRP C O doub N N 427 TRP C OXT sing N N 428 TRP CB CG sing N N 429 TRP CB HB2 sing N N 430 TRP CB HB3 sing N N 431 TRP CG CD1 doub Y N 432 TRP CG CD2 sing Y N 433 TRP CD1 NE1 sing Y N 434 TRP CD1 HD1 sing N N 435 TRP CD2 CE2 doub Y N 436 TRP CD2 CE3 sing Y N 437 TRP NE1 CE2 sing Y N 438 TRP NE1 HE1 sing N N 439 TRP CE2 CZ2 sing Y N 440 TRP CE3 CZ3 doub Y N 441 TRP CE3 HE3 sing N N 442 TRP CZ2 CH2 doub Y N 443 TRP CZ2 HZ2 sing N N 444 TRP CZ3 CH2 sing Y N 445 TRP CZ3 HZ3 sing N N 446 TRP CH2 HH2 sing N N 447 TRP OXT HXT sing N N 448 TYR N CA sing N N 449 TYR N H sing N N 450 TYR N H2 sing N N 451 TYR CA C sing N N 452 TYR CA CB sing N N 453 TYR CA HA sing N N 454 TYR C O doub N N 455 TYR C OXT sing N N 456 TYR CB CG sing N N 457 TYR CB HB2 sing N N 458 TYR CB HB3 sing N N 459 TYR CG CD1 doub Y N 460 TYR CG CD2 sing Y N 461 TYR CD1 CE1 sing Y N 462 TYR CD1 HD1 sing N N 463 TYR CD2 CE2 doub Y N 464 TYR CD2 HD2 sing N N 465 TYR CE1 CZ doub Y N 466 TYR CE1 HE1 sing N N 467 TYR CE2 CZ sing Y N 468 TYR CE2 HE2 sing N N 469 TYR CZ OH sing N N 470 TYR OH HH sing N N 471 TYR OXT HXT sing N N 472 VAL N CA sing N N 473 VAL N H sing N N 474 VAL N H2 sing N N 475 VAL CA C sing N N 476 VAL CA CB sing N N 477 VAL CA HA sing N N 478 VAL C O doub N N 479 VAL C OXT sing N N 480 VAL CB CG1 sing N N 481 VAL CB CG2 sing N N 482 VAL CB HB sing N N 483 VAL CG1 HG11 sing N N 484 VAL CG1 HG12 sing N N 485 VAL CG1 HG13 sing N N 486 VAL CG2 HG21 sing N N 487 VAL CG2 HG22 sing N N 488 VAL CG2 HG23 sing N N 489 VAL OXT HXT sing N N 490 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 NAG 1 C NAG 1 A NAG 1101 n C 2 NAG 2 C NAG 2 A NAG 1102 n C 2 BMA 3 C BMA 3 A MAN 1103 n C 2 MAN 4 C MAN 4 A MAN 1105 n C 2 BMA 5 C BMA 5 A MAN 1104 n D 3 NAG 1 D NAG 1 A NAG 1501 n D 3 NAG 2 D NAG 2 A NAG 1502 n D 3 MAN 3 D MAN 3 A MAN 1503 n E 4 NAG 1 E NAG 1 A NAG 1601 n E 4 NAG 2 E NAG 2 A NAG 1602 n E 4 BMA 3 E BMA 3 A MAN 1603 n E 4 MAN 4 E MAN 4 A MAN 1604 n F 5 NAG 1 F NAG 1 B NAG 1101 n F 5 NAG 2 F NAG 2 B NAG 1102 n F 5 BMA 3 F BMA 3 B MAN 1103 n F 5 MAN 4 F MAN 4 B MAN 1105 n F 5 BMA 5 F BMA 5 B MAN 1106 n F 5 MAN 6 F MAN 6 B MAN 1104 n G 6 NAG 1 G NAG 1 B NAG 1201 n G 6 NAG 2 G NAG 2 B NAG 1202 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide 4 oligosaccharide 5 oligosaccharide 6 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DManpa1-3[DManpb1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-2/a4-b1_b4-c1_c3-d1_c6-e1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][b-D-Manp]{}}}}}' LINUCS PDB-CARE ? 4 3 DManpa1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}}}' LINUCS PDB-CARE ? 7 4 DManpa1-3DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 8 4 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3/a4-b1_b4-c1_c3-d1' WURCS PDB2Glycan 1.1.0 9 4 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? 10 5 'DManpb1-2DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 11 5 'WURCS=2.0/3,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-2-3/a4-b1_b4-c1_c3-d1_c6-f1_d2-e1' WURCS PDB2Glycan 1.1.0 12 5 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][b-D-Manp]{}}[(6+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? 13 6 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 14 6 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 15 6 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O3 HO3 sing ? 4 2 5 BMA C1 O1 3 BMA O6 HO6 sing ? 5 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 6 3 3 MAN C1 O1 2 NAG O4 HO4 sing ? 7 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 8 4 3 BMA C1 O1 2 NAG O4 HO4 sing ? 9 4 4 MAN C1 O1 3 BMA O3 HO3 sing ? 10 5 2 NAG C1 O1 1 NAG O4 HO4 sing ? 11 5 3 BMA C1 O1 2 NAG O4 HO4 sing ? 12 5 4 MAN C1 O1 3 BMA O3 HO3 sing ? 13 5 5 BMA C1 O1 4 MAN O2 HO2 sing ? 14 5 6 MAN C1 O1 3 BMA O6 HO6 sing ? 15 6 2 NAG C1 O1 1 NAG O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n 2 BMA 5 n 3 NAG 1 n 3 NAG 2 n 3 MAN 3 n 4 NAG 1 n 4 NAG 2 n 4 BMA 3 n 4 MAN 4 n 5 NAG 1 n 5 NAG 2 n 5 BMA 3 n 5 MAN 4 n 5 BMA 5 n 5 MAN 6 n 6 NAG 1 n 6 NAG 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 7 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 8 'SULFATE ION' SO4 9 ;1-[(2S,3aS,4S,6R,6aR)-2-hydroxy-6-(hydroxymethyl)-2-oxidotetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]pyrimidine-2,4( 1H,3H)-dione ; JKM 10 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4DVK _pdbx_initial_refinement_model.details 'PDB entry 4DVK' #