data_4DYD # _entry.id 4DYD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DYD pdb_00004dyd 10.2210/pdb4dyd/pdb RCSB RCSB070937 ? ? WWPDB D_1000070937 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-11-14 2 'Structure model' 1 1 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DYD _pdbx_database_status.recvd_initial_deposition_date 2012-02-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lu, M.' 1 'White, M.A.' 2 'Huang, Y.' 3 'Wu, X.' 4 'Liu, N.' 5 'Cheng, X.' 6 'Chen, Y.' 7 # _citation.id primary _citation.title 'Dual catalysis mode for the dicarbonyl reduction catalyzed by diketoreductase' _citation.journal_abbrev 'Chem.Commun.(Camb.)' _citation.journal_volume 48 _citation.page_first 11352 _citation.page_last 11354 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1359-7345 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23073461 _citation.pdbx_database_id_DOI 10.1039/c2cc36334h # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lu, M.' 1 ? primary 'Huang, Y.' 2 ? primary 'White, M.A.' 3 ? primary 'Wu, X.' 4 ? primary 'Liu, N.' 5 ? primary 'Cheng, X.' 6 ? primary 'Chen, Y.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Diketoreductase 30266.248 1 ? ? ? ? 2 non-polymer syn NICOTINAMIDE-ADENINE-DINUCLEOTIDE 663.425 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 10 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 6 water nat water 18.015 42 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MTGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLA QAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTT KTDPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVG LTTAYNISSVSGPKQREFAAYLKENYIDKGKLGLATGEGFYRY ; _entity_poly.pdbx_seq_one_letter_code_can ;MTGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLA QAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTT KTDPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVG LTTAYNISSVSGPKQREFAAYLKENYIDKGKLGLATGEGFYRY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 NICOTINAMIDE-ADENINE-DINUCLEOTIDE NAD 3 GLYCEROL GOL 4 'SULFATE ION' SO4 5 'PHOSPHATE ION' PO4 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 GLY n 1 4 ILE n 1 5 THR n 1 6 ASN n 1 7 VAL n 1 8 THR n 1 9 VAL n 1 10 LEU n 1 11 GLY n 1 12 THR n 1 13 GLY n 1 14 VAL n 1 15 LEU n 1 16 GLY n 1 17 SER n 1 18 GLN n 1 19 ILE n 1 20 ALA n 1 21 PHE n 1 22 GLN n 1 23 THR n 1 24 ALA n 1 25 PHE n 1 26 HIS n 1 27 GLY n 1 28 PHE n 1 29 ALA n 1 30 VAL n 1 31 THR n 1 32 ALA n 1 33 TYR n 1 34 ASP n 1 35 ILE n 1 36 ASN n 1 37 THR n 1 38 ASP n 1 39 ALA n 1 40 LEU n 1 41 ASP n 1 42 ALA n 1 43 ALA n 1 44 LYS n 1 45 LYS n 1 46 ARG n 1 47 PHE n 1 48 GLU n 1 49 GLY n 1 50 LEU n 1 51 ALA n 1 52 ALA n 1 53 VAL n 1 54 TYR n 1 55 GLU n 1 56 LYS n 1 57 GLU n 1 58 VAL n 1 59 ALA n 1 60 GLY n 1 61 ALA n 1 62 ALA n 1 63 ASP n 1 64 GLY n 1 65 ALA n 1 66 ALA n 1 67 GLN n 1 68 LYS n 1 69 ALA n 1 70 LEU n 1 71 GLY n 1 72 GLY n 1 73 ILE n 1 74 ARG n 1 75 TYR n 1 76 SER n 1 77 ASP n 1 78 ASP n 1 79 LEU n 1 80 ALA n 1 81 GLN n 1 82 ALA n 1 83 VAL n 1 84 LYS n 1 85 ASP n 1 86 ALA n 1 87 ASP n 1 88 LEU n 1 89 VAL n 1 90 ILE n 1 91 GLU n 1 92 ALA n 1 93 VAL n 1 94 PRO n 1 95 GLU n 1 96 SER n 1 97 LEU n 1 98 ASP n 1 99 LEU n 1 100 LYS n 1 101 ARG n 1 102 ASP n 1 103 ILE n 1 104 TYR n 1 105 THR n 1 106 LYS n 1 107 LEU n 1 108 GLY n 1 109 GLU n 1 110 LEU n 1 111 ALA n 1 112 PRO n 1 113 ALA n 1 114 LYS n 1 115 THR n 1 116 ILE n 1 117 PHE n 1 118 ALA n 1 119 THR n 1 120 ASN n 1 121 SER n 1 122 SER n 1 123 THR n 1 124 LEU n 1 125 LEU n 1 126 PRO n 1 127 SER n 1 128 ASP n 1 129 LEU n 1 130 VAL n 1 131 GLY n 1 132 TYR n 1 133 THR n 1 134 GLY n 1 135 ARG n 1 136 GLY n 1 137 ASP n 1 138 LYS n 1 139 PHE n 1 140 LEU n 1 141 ALA n 1 142 LEU n 1 143 HIS n 1 144 PHE n 1 145 ALA n 1 146 ASN n 1 147 HIS n 1 148 VAL n 1 149 TRP n 1 150 VAL n 1 151 ASN n 1 152 ASN n 1 153 THR n 1 154 ALA n 1 155 GLU n 1 156 VAL n 1 157 MET n 1 158 GLY n 1 159 THR n 1 160 THR n 1 161 LYS n 1 162 THR n 1 163 ASP n 1 164 PRO n 1 165 GLU n 1 166 VAL n 1 167 TYR n 1 168 GLN n 1 169 GLN n 1 170 VAL n 1 171 VAL n 1 172 GLU n 1 173 PHE n 1 174 ALA n 1 175 SER n 1 176 ALA n 1 177 ILE n 1 178 GLY n 1 179 MET n 1 180 VAL n 1 181 PRO n 1 182 ILE n 1 183 GLU n 1 184 LEU n 1 185 LYS n 1 186 LYS n 1 187 GLU n 1 188 LYS n 1 189 ALA n 1 190 GLY n 1 191 TYR n 1 192 VAL n 1 193 LEU n 1 194 ASN n 1 195 SER n 1 196 LEU n 1 197 LEU n 1 198 VAL n 1 199 PRO n 1 200 LEU n 1 201 LEU n 1 202 ASP n 1 203 ALA n 1 204 ALA n 1 205 ALA n 1 206 GLU n 1 207 LEU n 1 208 LEU n 1 209 VAL n 1 210 ASP n 1 211 GLY n 1 212 ILE n 1 213 ALA n 1 214 ASP n 1 215 PRO n 1 216 GLU n 1 217 THR n 1 218 ILE n 1 219 ASP n 1 220 LYS n 1 221 THR n 1 222 TRP n 1 223 ARG n 1 224 ILE n 1 225 GLY n 1 226 THR n 1 227 GLY n 1 228 ALA n 1 229 PRO n 1 230 LYS n 1 231 GLY n 1 232 PRO n 1 233 PHE n 1 234 GLU n 1 235 ILE n 1 236 PHE n 1 237 ASP n 1 238 ILE n 1 239 VAL n 1 240 GLY n 1 241 LEU n 1 242 THR n 1 243 THR n 1 244 ALA n 1 245 TYR n 1 246 ASN n 1 247 ILE n 1 248 SER n 1 249 SER n 1 250 VAL n 1 251 SER n 1 252 GLY n 1 253 PRO n 1 254 LYS n 1 255 GLN n 1 256 ARG n 1 257 GLU n 1 258 PHE n 1 259 ALA n 1 260 ALA n 1 261 TYR n 1 262 LEU n 1 263 LYS n 1 264 GLU n 1 265 ASN n 1 266 TYR n 1 267 ILE n 1 268 ASP n 1 269 LYS n 1 270 GLY n 1 271 LYS n 1 272 LEU n 1 273 GLY n 1 274 LEU n 1 275 ALA n 1 276 THR n 1 277 GLY n 1 278 GLU n 1 279 GLY n 1 280 PHE n 1 281 TYR n 1 282 ARG n 1 283 TYR n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Acinetobacter baylyi' _entity_src_nat.pdbx_ncbi_taxonomy_id 202950 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details 'purchased from Invitrogen Bio Inc' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAD non-polymer . NICOTINAMIDE-ADENINE-DINUCLEOTIDE ? 'C21 H27 N7 O14 P2' 663.425 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 HIS 26 26 26 HIS HIS A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 TYR 33 33 33 TYR TYR A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 PRO 112 112 112 PRO PRO A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 PHE 117 117 117 PHE PHE A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 PRO 126 126 126 PRO PRO A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 ASP 128 128 128 ASP ASP A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 ASP 137 137 137 ASP ASP A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 PHE 139 139 139 PHE PHE A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 HIS 143 143 143 HIS HIS A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 ASN 146 146 146 ASN ASN A . n A 1 147 HIS 147 147 147 HIS HIS A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 TRP 149 149 149 TRP TRP A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 GLU 155 155 155 GLU GLU A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 MET 157 157 157 MET MET A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 THR 160 160 160 THR THR A . n A 1 161 LYS 161 161 161 LYS LYS A . n A 1 162 THR 162 162 162 THR THR A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 PRO 164 164 164 PRO PRO A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 TYR 167 167 167 TYR TYR A . n A 1 168 GLN 168 168 168 GLN GLN A . n A 1 169 GLN 169 169 169 GLN GLN A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 PHE 173 173 173 PHE PHE A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 SER 175 175 175 SER SER A . n A 1 176 ALA 176 176 176 ALA ALA A . n A 1 177 ILE 177 177 177 ILE ILE A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 MET 179 179 179 MET MET A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 ILE 182 182 182 ILE ILE A . n A 1 183 GLU 183 183 183 GLU GLU A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 LYS 185 185 185 LYS LYS A . n A 1 186 LYS 186 186 186 LYS LYS A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 LYS 188 188 188 LYS LYS A . n A 1 189 ALA 189 189 189 ALA ALA A . n A 1 190 GLY 190 190 190 GLY GLY A . n A 1 191 TYR 191 191 191 TYR TYR A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 ASN 194 194 194 ASN ASN A . n A 1 195 SER 195 195 195 SER SER A . n A 1 196 LEU 196 196 196 LEU LEU A . n A 1 197 LEU 197 197 197 LEU LEU A . n A 1 198 VAL 198 198 198 VAL VAL A . n A 1 199 PRO 199 199 199 PRO PRO A . n A 1 200 LEU 200 200 200 LEU LEU A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 ASP 202 202 202 ASP ASP A . n A 1 203 ALA 203 203 203 ALA ALA A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 GLU 206 206 206 GLU GLU A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 LEU 208 208 208 LEU LEU A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 ASP 210 210 210 ASP ASP A . n A 1 211 GLY 211 211 211 GLY GLY A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 ALA 213 213 213 ALA ALA A . n A 1 214 ASP 214 214 214 ASP ASP A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 THR 217 217 217 THR THR A . n A 1 218 ILE 218 218 218 ILE ILE A . n A 1 219 ASP 219 219 219 ASP ASP A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 THR 221 221 221 THR THR A . n A 1 222 TRP 222 222 222 TRP TRP A . n A 1 223 ARG 223 223 223 ARG ARG A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 GLY 227 227 227 GLY GLY A . n A 1 228 ALA 228 228 228 ALA ALA A . n A 1 229 PRO 229 229 229 PRO PRO A . n A 1 230 LYS 230 230 230 LYS LYS A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 PRO 232 232 232 PRO PRO A . n A 1 233 PHE 233 233 233 PHE PHE A . n A 1 234 GLU 234 234 234 GLU GLU A . n A 1 235 ILE 235 235 235 ILE ILE A . n A 1 236 PHE 236 236 236 PHE PHE A . n A 1 237 ASP 237 237 237 ASP ASP A . n A 1 238 ILE 238 238 238 ILE ILE A . n A 1 239 VAL 239 239 239 VAL VAL A . n A 1 240 GLY 240 240 240 GLY GLY A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 THR 242 242 242 THR THR A . n A 1 243 THR 243 243 243 THR THR A . n A 1 244 ALA 244 244 244 ALA ALA A . n A 1 245 TYR 245 245 245 TYR TYR A . n A 1 246 ASN 246 246 246 ASN ASN A . n A 1 247 ILE 247 247 247 ILE ILE A . n A 1 248 SER 248 248 248 SER SER A . n A 1 249 SER 249 249 249 SER SER A . n A 1 250 VAL 250 250 250 VAL VAL A . n A 1 251 SER 251 251 251 SER SER A . n A 1 252 GLY 252 252 252 GLY GLY A . n A 1 253 PRO 253 253 253 PRO PRO A . n A 1 254 LYS 254 254 254 LYS LYS A . n A 1 255 GLN 255 255 255 GLN GLN A . n A 1 256 ARG 256 256 256 ARG ARG A . n A 1 257 GLU 257 257 257 GLU GLU A . n A 1 258 PHE 258 258 258 PHE PHE A . n A 1 259 ALA 259 259 259 ALA ALA A . n A 1 260 ALA 260 260 260 ALA ALA A . n A 1 261 TYR 261 261 261 TYR TYR A . n A 1 262 LEU 262 262 262 LEU LEU A . n A 1 263 LYS 263 263 263 LYS LYS A . n A 1 264 GLU 264 264 264 GLU GLU A . n A 1 265 ASN 265 265 265 ASN ASN A . n A 1 266 TYR 266 266 266 TYR TYR A . n A 1 267 ILE 267 267 267 ILE ILE A . n A 1 268 ASP 268 268 268 ASP ASP A . n A 1 269 LYS 269 269 269 LYS LYS A . n A 1 270 GLY 270 270 270 GLY GLY A . n A 1 271 LYS 271 271 271 LYS LYS A . n A 1 272 LEU 272 272 272 LEU LEU A . n A 1 273 GLY 273 273 273 GLY GLY A . n A 1 274 LEU 274 274 274 LEU LEU A . n A 1 275 ALA 275 275 275 ALA ALA A . n A 1 276 THR 276 276 276 THR THR A . n A 1 277 GLY 277 277 277 GLY GLY A . n A 1 278 GLU 278 278 278 GLU GLU A . n A 1 279 GLY 279 279 279 GLY GLY A . n A 1 280 PHE 280 280 280 PHE PHE A . n A 1 281 TYR 281 281 281 TYR TYR A . n A 1 282 ARG 282 282 282 ARG ARG A . n A 1 283 TYR 283 283 283 TYR TYR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD 1 301 350 NAD NAD A . C 3 GOL 1 302 401 GOL GOL A . D 3 GOL 1 303 402 GOL GOL A . E 3 GOL 1 304 403 GOL GOL A . F 3 GOL 1 305 404 GOL GOL A . G 3 GOL 1 306 405 GOL GOL A . H 3 GOL 1 307 406 GOL GOL A . I 3 GOL 1 308 407 GOL GOL A . J 3 GOL 1 309 408 GOL GOL A . K 3 GOL 1 310 409 GOL GOL A . L 3 GOL 1 311 410 GOL GOL A . M 4 SO4 1 312 501 SO4 SO4 A . N 5 PO4 1 313 521 PO4 PO4 A . O 5 PO4 1 314 522 PO4 PO4 A . P 6 HOH 1 401 1 HOH HOH A . P 6 HOH 2 402 2 HOH HOH A . P 6 HOH 3 403 3 HOH HOH A . P 6 HOH 4 404 4 HOH HOH A . P 6 HOH 5 405 5 HOH HOH A . P 6 HOH 6 406 6 HOH HOH A . P 6 HOH 7 407 7 HOH HOH A . P 6 HOH 8 408 8 HOH HOH A . P 6 HOH 9 409 9 HOH HOH A . P 6 HOH 10 410 10 HOH HOH A . P 6 HOH 11 411 11 HOH HOH A . P 6 HOH 12 412 12 HOH HOH A . P 6 HOH 13 413 13 HOH HOH A . P 6 HOH 14 414 14 HOH HOH A . P 6 HOH 15 415 15 HOH HOH A . P 6 HOH 16 416 16 HOH HOH A . P 6 HOH 17 417 17 HOH HOH A . P 6 HOH 18 418 18 HOH HOH A . P 6 HOH 19 419 19 HOH HOH A . P 6 HOH 20 420 20 HOH HOH A . P 6 HOH 21 421 21 HOH HOH A . P 6 HOH 22 422 22 HOH HOH A . P 6 HOH 23 423 23 HOH HOH A . P 6 HOH 24 424 24 HOH HOH A . P 6 HOH 25 425 25 HOH HOH A . P 6 HOH 26 426 26 HOH HOH A . P 6 HOH 27 427 27 HOH HOH A . P 6 HOH 28 428 28 HOH HOH A . P 6 HOH 29 429 29 HOH HOH A . P 6 HOH 30 430 30 HOH HOH A . P 6 HOH 31 431 31 HOH HOH A . P 6 HOH 32 432 32 HOH HOH A . P 6 HOH 33 433 33 HOH HOH A . P 6 HOH 34 434 34 HOH HOH A . P 6 HOH 35 435 35 HOH HOH A . P 6 HOH 36 436 36 HOH HOH A . P 6 HOH 37 437 37 HOH HOH A . P 6 HOH 38 438 38 HOH HOH A . P 6 HOH 39 439 39 HOH HOH A . P 6 HOH 40 440 40 HOH HOH A . P 6 HOH 41 441 41 HOH HOH A . P 6 HOH 42 442 42 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 SOLVE phasing . ? 2 CNS refinement 1.1 ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 # _cell.entry_id 4DYD _cell.length_a 100.480 _cell.length_b 100.480 _cell.length_c 131.910 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DYD _symmetry.space_group_name_H-M 'P 62 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4DYD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.18 _exptl_crystal.density_percent_sol 61.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details ;2%(v/v) polyethylene glycol 400, 0.2M lithium sulfate, 1.6M ammonium sulfate, 0.1M sodium citrate, pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 85 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2011-07-24 _diffrn_detector.details CONFOCAL # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator MULTILAYER _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E+ DW' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 4DYD _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.950 _reflns.number_obs 28421 _reflns.number_all ? _reflns.percent_possible_obs 96.2 _reflns.pdbx_Rmerge_I_obs 0.06100 _reflns.pdbx_Rsym_value 0.06100 _reflns.pdbx_netI_over_sigmaI 34.0000 _reflns.B_iso_Wilson_estimate 34.4 _reflns.pdbx_redundancy 4.800 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 1.98 _reflns_shell.percent_possible_all 68.4 _reflns_shell.Rmerge_I_obs 0.58000 _reflns_shell.pdbx_Rsym_value 0.58000 _reflns_shell.meanI_over_sigI_obs 1.800 _reflns_shell.pdbx_redundancy 2.00 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1362 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4DYD _refine.ls_number_reflns_obs 26933 _refine.ls_number_reflns_all 28335 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 2181442.43 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.97 _refine.ls_d_res_high 1.95 _refine.ls_percent_reflns_obs 96.6 _refine.ls_R_factor_obs 0.217 _refine.ls_R_factor_all 0.221 _refine.ls_R_factor_R_work 0.217 _refine.ls_R_factor_R_free 0.242 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 1462 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 49.6 _refine.aniso_B[1][1] 0.22 _refine.aniso_B[2][2] 0.22 _refine.aniso_B[3][3] -0.44 _refine.aniso_B[1][2] 2.35 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.383453 _refine.solvent_model_param_bsol 60.3426 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'the structure was refined also with PMB' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model variable _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'THICK SHELLS' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4DYD _refine_analyze.Luzzati_coordinate_error_obs 0.26 _refine_analyze.Luzzati_sigma_a_obs 0.34 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.33 _refine_analyze.Luzzati_sigma_a_free 0.46 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2135 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 119 _refine_hist.number_atoms_solvent 42 _refine_hist.number_atoms_total 2296 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 39.97 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_bond_d 0.004 ? ? ? ? 'X-RAY DIFFRACTION' c_bond_d_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_bond_d_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_d ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_d_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_d_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg 1.1 ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d 17.9 ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d 1.11 ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' c_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' c_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' c_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.95 _refine_ls_shell.d_res_low 1.98 _refine_ls_shell.number_reflns_R_work 1010 _refine_ls_shell.R_factor_R_work 0.415 _refine_ls_shell.percent_reflns_obs 75.3 _refine_ls_shell.R_factor_R_free 0.417 _refine_ls_shell.R_factor_R_free_error 0.056 _refine_ls_shell.percent_reflns_R_free 5.3 _refine_ls_shell.number_reflns_R_free 56 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1362 _refine_ls_shell.redundancy_reflns_obs ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_rep_pmb.param protein_pmb.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' 4 ligand.param ligand.top 'X-RAY DIFFRACTION' 5 carbohydrate.param ? # _database_PDB_matrix.entry_id 4DYD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4DYD _struct.title 'Substrate-directed dual catalysis of dicarbonyl compounds by diketoreductase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DYD _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'OXIDOREDUCTASE, NADH' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 4 ? N N N 5 ? O N N 5 ? P N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B1P3E1_ACIBI _struct_ref.pdbx_db_accession B1P3E1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLA QAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTT KTDPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVG LTTAYNISSVSGPKQREFAAYLKENYIDKGKLGLATGEGFYRY ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4DYD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 283 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B1P3E1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 283 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 283 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10580 ? 1 MORE -114 ? 1 'SSA (A^2)' 24190 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+2/3 0.5000000000 -0.8660254038 0.0000000000 50.2400000000 -0.8660254038 -0.5000000000 0.0000000000 87.0182325723 0.0000000000 0.0000000000 -1.0000000000 87.9400000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 13 ? HIS A 26 ? GLY A 13 HIS A 26 1 ? 14 HELX_P HELX_P2 2 ASN A 36 ? VAL A 58 ? ASN A 36 VAL A 58 1 ? 23 HELX_P HELX_P3 3 GLY A 64 ? ILE A 73 ? GLY A 64 ILE A 73 1 ? 10 HELX_P HELX_P4 4 ASP A 78 ? VAL A 83 ? ASP A 78 VAL A 83 1 ? 6 HELX_P HELX_P5 5 SER A 96 ? ALA A 111 ? SER A 96 ALA A 111 1 ? 16 HELX_P HELX_P6 6 LEU A 125 ? ASP A 128 ? LEU A 125 ASP A 128 5 ? 4 HELX_P HELX_P7 7 LEU A 129 ? GLY A 134 ? LEU A 129 GLY A 134 1 ? 6 HELX_P HELX_P8 8 ARG A 135 ? ASP A 137 ? ARG A 135 ASP A 137 5 ? 3 HELX_P HELX_P9 9 ASP A 163 ? ILE A 177 ? ASP A 163 ILE A 177 1 ? 15 HELX_P HELX_P10 10 VAL A 192 ? ASP A 210 ? VAL A 192 ASP A 210 1 ? 19 HELX_P HELX_P11 11 ASP A 214 ? GLY A 227 ? ASP A 214 GLY A 227 1 ? 14 HELX_P HELX_P12 12 GLY A 231 ? GLY A 240 ? GLY A 231 GLY A 240 1 ? 10 HELX_P HELX_P13 13 GLY A 240 ? VAL A 250 ? GLY A 240 VAL A 250 1 ? 11 HELX_P HELX_P14 14 GLY A 252 ? TYR A 266 ? GLY A 252 TYR A 266 1 ? 15 HELX_P HELX_P15 15 ILE A 267 ? GLY A 270 ? ILE A 267 GLY A 270 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 74 ? SER A 76 ? ARG A 74 SER A 76 A 2 ALA A 29 ? TYR A 33 ? ALA A 29 TYR A 33 A 3 ASN A 6 ? LEU A 10 ? ASN A 6 LEU A 10 A 4 LEU A 88 ? GLU A 91 ? LEU A 88 GLU A 91 A 5 ILE A 116 ? THR A 119 ? ILE A 116 THR A 119 A 6 PHE A 139 ? HIS A 143 ? PHE A 139 HIS A 143 A 7 THR A 153 ? GLY A 158 ? THR A 153 GLY A 158 A 8 VAL A 180 ? GLU A 183 ? VAL A 180 GLU A 183 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 74 ? O ARG A 74 N ALA A 32 ? N ALA A 32 A 2 3 O TYR A 33 ? O TYR A 33 N VAL A 9 ? N VAL A 9 A 3 4 N THR A 8 ? N THR A 8 O ILE A 90 ? O ILE A 90 A 4 5 N GLU A 91 ? N GLU A 91 O ALA A 118 ? O ALA A 118 A 5 6 N THR A 119 ? N THR A 119 O LEU A 142 ? O LEU A 142 A 6 7 N ALA A 141 ? N ALA A 141 O MET A 157 ? O MET A 157 A 7 8 N VAL A 156 ? N VAL A 156 O ILE A 182 ? O ILE A 182 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NAD 301 ? 21 'BINDING SITE FOR RESIDUE NAD A 301' AC2 Software A GOL 302 ? 4 'BINDING SITE FOR RESIDUE GOL A 302' AC3 Software A GOL 303 ? 1 'BINDING SITE FOR RESIDUE GOL A 303' AC4 Software A GOL 304 ? 2 'BINDING SITE FOR RESIDUE GOL A 304' AC5 Software A GOL 305 ? 6 'BINDING SITE FOR RESIDUE GOL A 305' AC6 Software A GOL 306 ? 3 'BINDING SITE FOR RESIDUE GOL A 306' AC7 Software A GOL 307 ? 3 'BINDING SITE FOR RESIDUE GOL A 307' AC8 Software A GOL 308 ? 3 'BINDING SITE FOR RESIDUE GOL A 308' AC9 Software A GOL 309 ? 6 'BINDING SITE FOR RESIDUE GOL A 309' BC1 Software A GOL 310 ? 1 'BINDING SITE FOR RESIDUE GOL A 310' BC2 Software A GOL 311 ? 2 'BINDING SITE FOR RESIDUE GOL A 311' BC3 Software A SO4 312 ? 8 'BINDING SITE FOR RESIDUE SO4 A 312' BC4 Software A PO4 313 ? 5 'BINDING SITE FOR RESIDUE PO4 A 313' BC5 Software A PO4 314 ? 3 'BINDING SITE FOR RESIDUE PO4 A 314' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 GLY A 11 ? GLY A 11 . ? 1_555 ? 2 AC1 21 THR A 12 ? THR A 12 . ? 1_555 ? 3 AC1 21 GLY A 13 ? GLY A 13 . ? 1_555 ? 4 AC1 21 VAL A 14 ? VAL A 14 . ? 1_555 ? 5 AC1 21 LEU A 15 ? LEU A 15 . ? 1_555 ? 6 AC1 21 ASP A 34 ? ASP A 34 . ? 1_555 ? 7 AC1 21 ILE A 35 ? ILE A 35 . ? 1_555 ? 8 AC1 21 ALA A 92 ? ALA A 92 . ? 1_555 ? 9 AC1 21 VAL A 93 ? VAL A 93 . ? 1_555 ? 10 AC1 21 PRO A 94 ? PRO A 94 . ? 1_555 ? 11 AC1 21 GLU A 95 ? GLU A 95 . ? 1_555 ? 12 AC1 21 LEU A 99 ? LEU A 99 . ? 1_555 ? 13 AC1 21 LYS A 100 ? LYS A 100 . ? 1_555 ? 14 AC1 21 ILE A 103 ? ILE A 103 . ? 1_555 ? 15 AC1 21 ASN A 120 ? ASN A 120 . ? 1_555 ? 16 AC1 21 SER A 121 ? SER A 121 . ? 1_555 ? 17 AC1 21 SER A 122 ? SER A 122 . ? 1_555 ? 18 AC1 21 HIS A 143 ? HIS A 143 . ? 1_555 ? 19 AC1 21 PHE A 144 ? PHE A 144 . ? 1_555 ? 20 AC1 21 ARG A 256 ? ARG A 256 . ? 11_656 ? 21 AC1 21 HOH P . ? HOH A 408 . ? 1_555 ? 22 AC2 4 SER A 76 ? SER A 76 . ? 12_556 ? 23 AC2 4 ASP A 77 ? ASP A 77 . ? 12_556 ? 24 AC2 4 ASP A 78 ? ASP A 78 . ? 1_555 ? 25 AC2 4 GLN A 81 ? GLN A 81 . ? 1_555 ? 26 AC3 1 GLY A 225 ? GLY A 225 . ? 10_665 ? 27 AC4 2 GLU A 234 ? GLU A 234 . ? 1_555 ? 28 AC4 2 ARG A 282 ? ARG A 282 . ? 1_555 ? 29 AC5 6 LEU A 201 ? LEU A 201 . ? 1_555 ? 30 AC5 6 ASP A 202 ? ASP A 202 . ? 1_555 ? 31 AC5 6 PHE A 236 ? PHE A 236 . ? 1_555 ? 32 AC5 6 ALA A 244 ? ALA A 244 . ? 1_555 ? 33 AC5 6 ILE A 247 ? ILE A 247 . ? 1_555 ? 34 AC5 6 SER A 248 ? SER A 248 . ? 1_555 ? 35 AC6 3 THR A 37 ? THR A 37 . ? 12_556 ? 36 AC6 3 ASP A 77 ? ASP A 77 . ? 12_556 ? 37 AC6 3 LYS A 106 ? LYS A 106 . ? 1_555 ? 38 AC7 3 PHE A 25 ? PHE A 25 . ? 1_555 ? 39 AC7 3 GLY A 277 ? GLY A 277 . ? 4_665 ? 40 AC7 3 TYR A 283 ? TYR A 283 . ? 4_665 ? 41 AC8 3 THR A 160 ? THR A 160 . ? 1_555 ? 42 AC8 3 LYS A 161 ? LYS A 161 . ? 1_555 ? 43 AC8 3 GOL J . ? GOL A 309 . ? 1_555 ? 44 AC9 6 THR A 159 ? THR A 159 . ? 1_555 ? 45 AC9 6 THR A 160 ? THR A 160 . ? 1_555 ? 46 AC9 6 LYS A 185 ? LYS A 185 . ? 1_555 ? 47 AC9 6 LYS A 186 ? LYS A 186 . ? 1_555 ? 48 AC9 6 GLU A 187 ? GLU A 187 . ? 1_555 ? 49 AC9 6 GOL I . ? GOL A 308 . ? 1_555 ? 50 BC1 1 ALA A 113 ? ALA A 113 . ? 1_555 ? 51 BC2 2 HIS A 26 ? HIS A 26 . ? 1_555 ? 52 BC2 2 GLY A 27 ? GLY A 27 . ? 1_555 ? 53 BC3 8 GLY A 240 ? GLY A 240 . ? 1_555 ? 54 BC3 8 LEU A 241 ? LEU A 241 . ? 1_555 ? 55 BC3 8 THR A 242 ? THR A 242 . ? 1_555 ? 56 BC3 8 THR A 243 ? THR A 243 . ? 1_555 ? 57 BC3 8 LYS A 263 ? LYS A 263 . ? 11_656 ? 58 BC3 8 LEU A 272 ? LEU A 272 . ? 1_555 ? 59 BC3 8 HOH P . ? HOH A 416 . ? 1_555 ? 60 BC3 8 HOH P . ? HOH A 432 . ? 1_555 ? 61 BC4 5 VAL A 14 ? VAL A 14 . ? 1_555 ? 62 BC4 5 GLN A 18 ? GLN A 18 . ? 1_555 ? 63 BC4 5 LYS A 56 ? LYS A 56 . ? 4_665 ? 64 BC4 5 ASN A 146 ? ASN A 146 . ? 1_555 ? 65 BC4 5 HIS A 147 ? HIS A 147 . ? 1_555 ? 66 BC5 3 LEU A 40 ? LEU A 40 . ? 1_555 ? 67 BC5 3 ASP A 41 ? ASP A 41 . ? 1_555 ? 68 BC5 3 TYR A 75 ? TYR A 75 . ? 1_555 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OD2 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 ASP _pdbx_validate_symm_contact.auth_seq_id_1 78 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OD2 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 ASP _pdbx_validate_symm_contact.auth_seq_id_2 78 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 12_556 _pdbx_validate_symm_contact.dist 2.11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 2 ? ? -125.27 -56.39 2 1 THR A 5 ? ? -135.76 -47.65 3 1 HIS A 147 ? ? 65.93 65.07 4 1 ASN A 152 ? ? -93.12 38.77 5 1 TYR A 191 ? ? 53.49 -139.64 6 1 SER A 251 ? ? -114.81 -164.28 7 1 TYR A 266 ? ? -127.88 -59.03 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 GOL C1 C N N 123 GOL O1 O N N 124 GOL C2 C N N 125 GOL O2 O N N 126 GOL C3 C N N 127 GOL O3 O N N 128 GOL H11 H N N 129 GOL H12 H N N 130 GOL HO1 H N N 131 GOL H2 H N N 132 GOL HO2 H N N 133 GOL H31 H N N 134 GOL H32 H N N 135 GOL HO3 H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NAD PA P N S 250 NAD O1A O N N 251 NAD O2A O N N 252 NAD O5B O N N 253 NAD C5B C N N 254 NAD C4B C N R 255 NAD O4B O N N 256 NAD C3B C N S 257 NAD O3B O N N 258 NAD C2B C N R 259 NAD O2B O N N 260 NAD C1B C N R 261 NAD N9A N Y N 262 NAD C8A C Y N 263 NAD N7A N Y N 264 NAD C5A C Y N 265 NAD C6A C Y N 266 NAD N6A N N N 267 NAD N1A N Y N 268 NAD C2A C Y N 269 NAD N3A N Y N 270 NAD C4A C Y N 271 NAD O3 O N N 272 NAD PN P N N 273 NAD O1N O N N 274 NAD O2N O N N 275 NAD O5D O N N 276 NAD C5D C N N 277 NAD C4D C N R 278 NAD O4D O N N 279 NAD C3D C N S 280 NAD O3D O N N 281 NAD C2D C N R 282 NAD O2D O N N 283 NAD C1D C N R 284 NAD N1N N Y N 285 NAD C2N C Y N 286 NAD C3N C Y N 287 NAD C7N C N N 288 NAD O7N O N N 289 NAD N7N N N N 290 NAD C4N C Y N 291 NAD C5N C Y N 292 NAD C6N C Y N 293 NAD HOA2 H N N 294 NAD H51A H N N 295 NAD H52A H N N 296 NAD H4B H N N 297 NAD H3B H N N 298 NAD HO3A H N N 299 NAD H2B H N N 300 NAD HO2A H N N 301 NAD H1B H N N 302 NAD H8A H N N 303 NAD H61A H N N 304 NAD H62A H N N 305 NAD H2A H N N 306 NAD H51N H N N 307 NAD H52N H N N 308 NAD H4D H N N 309 NAD H3D H N N 310 NAD HO3N H N N 311 NAD H2D H N N 312 NAD HO2N H N N 313 NAD H1D H N N 314 NAD H2N H N N 315 NAD H71N H N N 316 NAD H72N H N N 317 NAD H4N H N N 318 NAD H5N H N N 319 NAD H6N H N N 320 PHE N N N N 321 PHE CA C N S 322 PHE C C N N 323 PHE O O N N 324 PHE CB C N N 325 PHE CG C Y N 326 PHE CD1 C Y N 327 PHE CD2 C Y N 328 PHE CE1 C Y N 329 PHE CE2 C Y N 330 PHE CZ C Y N 331 PHE OXT O N N 332 PHE H H N N 333 PHE H2 H N N 334 PHE HA H N N 335 PHE HB2 H N N 336 PHE HB3 H N N 337 PHE HD1 H N N 338 PHE HD2 H N N 339 PHE HE1 H N N 340 PHE HE2 H N N 341 PHE HZ H N N 342 PHE HXT H N N 343 PO4 P P N N 344 PO4 O1 O N N 345 PO4 O2 O N N 346 PO4 O3 O N N 347 PO4 O4 O N N 348 PRO N N N N 349 PRO CA C N S 350 PRO C C N N 351 PRO O O N N 352 PRO CB C N N 353 PRO CG C N N 354 PRO CD C N N 355 PRO OXT O N N 356 PRO H H N N 357 PRO HA H N N 358 PRO HB2 H N N 359 PRO HB3 H N N 360 PRO HG2 H N N 361 PRO HG3 H N N 362 PRO HD2 H N N 363 PRO HD3 H N N 364 PRO HXT H N N 365 SER N N N N 366 SER CA C N S 367 SER C C N N 368 SER O O N N 369 SER CB C N N 370 SER OG O N N 371 SER OXT O N N 372 SER H H N N 373 SER H2 H N N 374 SER HA H N N 375 SER HB2 H N N 376 SER HB3 H N N 377 SER HG H N N 378 SER HXT H N N 379 SO4 S S N N 380 SO4 O1 O N N 381 SO4 O2 O N N 382 SO4 O3 O N N 383 SO4 O4 O N N 384 THR N N N N 385 THR CA C N S 386 THR C C N N 387 THR O O N N 388 THR CB C N R 389 THR OG1 O N N 390 THR CG2 C N N 391 THR OXT O N N 392 THR H H N N 393 THR H2 H N N 394 THR HA H N N 395 THR HB H N N 396 THR HG1 H N N 397 THR HG21 H N N 398 THR HG22 H N N 399 THR HG23 H N N 400 THR HXT H N N 401 TRP N N N N 402 TRP CA C N S 403 TRP C C N N 404 TRP O O N N 405 TRP CB C N N 406 TRP CG C Y N 407 TRP CD1 C Y N 408 TRP CD2 C Y N 409 TRP NE1 N Y N 410 TRP CE2 C Y N 411 TRP CE3 C Y N 412 TRP CZ2 C Y N 413 TRP CZ3 C Y N 414 TRP CH2 C Y N 415 TRP OXT O N N 416 TRP H H N N 417 TRP H2 H N N 418 TRP HA H N N 419 TRP HB2 H N N 420 TRP HB3 H N N 421 TRP HD1 H N N 422 TRP HE1 H N N 423 TRP HE3 H N N 424 TRP HZ2 H N N 425 TRP HZ3 H N N 426 TRP HH2 H N N 427 TRP HXT H N N 428 TYR N N N N 429 TYR CA C N S 430 TYR C C N N 431 TYR O O N N 432 TYR CB C N N 433 TYR CG C Y N 434 TYR CD1 C Y N 435 TYR CD2 C Y N 436 TYR CE1 C Y N 437 TYR CE2 C Y N 438 TYR CZ C Y N 439 TYR OH O N N 440 TYR OXT O N N 441 TYR H H N N 442 TYR H2 H N N 443 TYR HA H N N 444 TYR HB2 H N N 445 TYR HB3 H N N 446 TYR HD1 H N N 447 TYR HD2 H N N 448 TYR HE1 H N N 449 TYR HE2 H N N 450 TYR HH H N N 451 TYR HXT H N N 452 VAL N N N N 453 VAL CA C N S 454 VAL C C N N 455 VAL O O N N 456 VAL CB C N N 457 VAL CG1 C N N 458 VAL CG2 C N N 459 VAL OXT O N N 460 VAL H H N N 461 VAL H2 H N N 462 VAL HA H N N 463 VAL HB H N N 464 VAL HG11 H N N 465 VAL HG12 H N N 466 VAL HG13 H N N 467 VAL HG21 H N N 468 VAL HG22 H N N 469 VAL HG23 H N N 470 VAL HXT H N N 471 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 GOL C1 O1 sing N N 116 GOL C1 C2 sing N N 117 GOL C1 H11 sing N N 118 GOL C1 H12 sing N N 119 GOL O1 HO1 sing N N 120 GOL C2 O2 sing N N 121 GOL C2 C3 sing N N 122 GOL C2 H2 sing N N 123 GOL O2 HO2 sing N N 124 GOL C3 O3 sing N N 125 GOL C3 H31 sing N N 126 GOL C3 H32 sing N N 127 GOL O3 HO3 sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NAD PA O1A doub N N 237 NAD PA O2A sing N N 238 NAD PA O5B sing N N 239 NAD PA O3 sing N N 240 NAD O2A HOA2 sing N N 241 NAD O5B C5B sing N N 242 NAD C5B C4B sing N N 243 NAD C5B H51A sing N N 244 NAD C5B H52A sing N N 245 NAD C4B O4B sing N N 246 NAD C4B C3B sing N N 247 NAD C4B H4B sing N N 248 NAD O4B C1B sing N N 249 NAD C3B O3B sing N N 250 NAD C3B C2B sing N N 251 NAD C3B H3B sing N N 252 NAD O3B HO3A sing N N 253 NAD C2B O2B sing N N 254 NAD C2B C1B sing N N 255 NAD C2B H2B sing N N 256 NAD O2B HO2A sing N N 257 NAD C1B N9A sing N N 258 NAD C1B H1B sing N N 259 NAD N9A C8A sing Y N 260 NAD N9A C4A sing Y N 261 NAD C8A N7A doub Y N 262 NAD C8A H8A sing N N 263 NAD N7A C5A sing Y N 264 NAD C5A C6A sing Y N 265 NAD C5A C4A doub Y N 266 NAD C6A N6A sing N N 267 NAD C6A N1A doub Y N 268 NAD N6A H61A sing N N 269 NAD N6A H62A sing N N 270 NAD N1A C2A sing Y N 271 NAD C2A N3A doub Y N 272 NAD C2A H2A sing N N 273 NAD N3A C4A sing Y N 274 NAD O3 PN sing N N 275 NAD PN O1N doub N N 276 NAD PN O2N sing N N 277 NAD PN O5D sing N N 278 NAD O5D C5D sing N N 279 NAD C5D C4D sing N N 280 NAD C5D H51N sing N N 281 NAD C5D H52N sing N N 282 NAD C4D O4D sing N N 283 NAD C4D C3D sing N N 284 NAD C4D H4D sing N N 285 NAD O4D C1D sing N N 286 NAD C3D O3D sing N N 287 NAD C3D C2D sing N N 288 NAD C3D H3D sing N N 289 NAD O3D HO3N sing N N 290 NAD C2D O2D sing N N 291 NAD C2D C1D sing N N 292 NAD C2D H2D sing N N 293 NAD O2D HO2N sing N N 294 NAD C1D N1N sing N N 295 NAD C1D H1D sing N N 296 NAD N1N C2N sing Y N 297 NAD N1N C6N doub Y N 298 NAD C2N C3N doub Y N 299 NAD C2N H2N sing N N 300 NAD C3N C7N sing N N 301 NAD C3N C4N sing Y N 302 NAD C7N O7N doub N N 303 NAD C7N N7N sing N N 304 NAD N7N H71N sing N N 305 NAD N7N H72N sing N N 306 NAD C4N C5N doub Y N 307 NAD C4N H4N sing N N 308 NAD C5N C6N sing Y N 309 NAD C5N H5N sing N N 310 NAD C6N H6N sing N N 311 PHE N CA sing N N 312 PHE N H sing N N 313 PHE N H2 sing N N 314 PHE CA C sing N N 315 PHE CA CB sing N N 316 PHE CA HA sing N N 317 PHE C O doub N N 318 PHE C OXT sing N N 319 PHE CB CG sing N N 320 PHE CB HB2 sing N N 321 PHE CB HB3 sing N N 322 PHE CG CD1 doub Y N 323 PHE CG CD2 sing Y N 324 PHE CD1 CE1 sing Y N 325 PHE CD1 HD1 sing N N 326 PHE CD2 CE2 doub Y N 327 PHE CD2 HD2 sing N N 328 PHE CE1 CZ doub Y N 329 PHE CE1 HE1 sing N N 330 PHE CE2 CZ sing Y N 331 PHE CE2 HE2 sing N N 332 PHE CZ HZ sing N N 333 PHE OXT HXT sing N N 334 PO4 P O1 doub N N 335 PO4 P O2 sing N N 336 PO4 P O3 sing N N 337 PO4 P O4 sing N N 338 PRO N CA sing N N 339 PRO N CD sing N N 340 PRO N H sing N N 341 PRO CA C sing N N 342 PRO CA CB sing N N 343 PRO CA HA sing N N 344 PRO C O doub N N 345 PRO C OXT sing N N 346 PRO CB CG sing N N 347 PRO CB HB2 sing N N 348 PRO CB HB3 sing N N 349 PRO CG CD sing N N 350 PRO CG HG2 sing N N 351 PRO CG HG3 sing N N 352 PRO CD HD2 sing N N 353 PRO CD HD3 sing N N 354 PRO OXT HXT sing N N 355 SER N CA sing N N 356 SER N H sing N N 357 SER N H2 sing N N 358 SER CA C sing N N 359 SER CA CB sing N N 360 SER CA HA sing N N 361 SER C O doub N N 362 SER C OXT sing N N 363 SER CB OG sing N N 364 SER CB HB2 sing N N 365 SER CB HB3 sing N N 366 SER OG HG sing N N 367 SER OXT HXT sing N N 368 SO4 S O1 doub N N 369 SO4 S O2 doub N N 370 SO4 S O3 sing N N 371 SO4 S O4 sing N N 372 THR N CA sing N N 373 THR N H sing N N 374 THR N H2 sing N N 375 THR CA C sing N N 376 THR CA CB sing N N 377 THR CA HA sing N N 378 THR C O doub N N 379 THR C OXT sing N N 380 THR CB OG1 sing N N 381 THR CB CG2 sing N N 382 THR CB HB sing N N 383 THR OG1 HG1 sing N N 384 THR CG2 HG21 sing N N 385 THR CG2 HG22 sing N N 386 THR CG2 HG23 sing N N 387 THR OXT HXT sing N N 388 TRP N CA sing N N 389 TRP N H sing N N 390 TRP N H2 sing N N 391 TRP CA C sing N N 392 TRP CA CB sing N N 393 TRP CA HA sing N N 394 TRP C O doub N N 395 TRP C OXT sing N N 396 TRP CB CG sing N N 397 TRP CB HB2 sing N N 398 TRP CB HB3 sing N N 399 TRP CG CD1 doub Y N 400 TRP CG CD2 sing Y N 401 TRP CD1 NE1 sing Y N 402 TRP CD1 HD1 sing N N 403 TRP CD2 CE2 doub Y N 404 TRP CD2 CE3 sing Y N 405 TRP NE1 CE2 sing Y N 406 TRP NE1 HE1 sing N N 407 TRP CE2 CZ2 sing Y N 408 TRP CE3 CZ3 doub Y N 409 TRP CE3 HE3 sing N N 410 TRP CZ2 CH2 doub Y N 411 TRP CZ2 HZ2 sing N N 412 TRP CZ3 CH2 sing Y N 413 TRP CZ3 HZ3 sing N N 414 TRP CH2 HH2 sing N N 415 TRP OXT HXT sing N N 416 TYR N CA sing N N 417 TYR N H sing N N 418 TYR N H2 sing N N 419 TYR CA C sing N N 420 TYR CA CB sing N N 421 TYR CA HA sing N N 422 TYR C O doub N N 423 TYR C OXT sing N N 424 TYR CB CG sing N N 425 TYR CB HB2 sing N N 426 TYR CB HB3 sing N N 427 TYR CG CD1 doub Y N 428 TYR CG CD2 sing Y N 429 TYR CD1 CE1 sing Y N 430 TYR CD1 HD1 sing N N 431 TYR CD2 CE2 doub Y N 432 TYR CD2 HD2 sing N N 433 TYR CE1 CZ doub Y N 434 TYR CE1 HE1 sing N N 435 TYR CE2 CZ sing Y N 436 TYR CE2 HE2 sing N N 437 TYR CZ OH sing N N 438 TYR OH HH sing N N 439 TYR OXT HXT sing N N 440 VAL N CA sing N N 441 VAL N H sing N N 442 VAL N H2 sing N N 443 VAL CA C sing N N 444 VAL CA CB sing N N 445 VAL CA HA sing N N 446 VAL C O doub N N 447 VAL C OXT sing N N 448 VAL CB CG1 sing N N 449 VAL CB CG2 sing N N 450 VAL CB HB sing N N 451 VAL CG1 HG11 sing N N 452 VAL CG1 HG12 sing N N 453 VAL CG1 HG13 sing N N 454 VAL CG2 HG21 sing N N 455 VAL CG2 HG22 sing N N 456 VAL CG2 HG23 sing N N 457 VAL OXT HXT sing N N 458 # _atom_sites.entry_id 4DYD _atom_sites.fract_transf_matrix[1][1] 0.009952 _atom_sites.fract_transf_matrix[1][2] 0.005746 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011492 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007581 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_