HEADER HYDROLASE/HYDROLASE INHIBITOR 19-MAR-12 4E7R TITLE THROMBIN IN COMPLEX WITH 3-AMIDINOPHENYLALANINE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: THROMBIN LIGHT CHAIN; COMPND 3 CHAIN: L, M; COMPND 4 EC: 3.4.21.5; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: THROMBIN HEAVY CHAIN; COMPND 7 CHAIN: H, G; COMPND 8 EC: 3.4.21.5; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: HIRUDIN VARIANT-2; COMPND 11 CHAIN: I, J; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HIRUDO MEDICINALIS; SOURCE 12 ORGANISM_COMMON: MEDICINAL LEECH; SOURCE 13 ORGANISM_TAXID: 6421; SOURCE 14 OTHER_DETAILS: SYNTHETIC CONSTRUCT KEYWDS HYDROLASE-HYDROLASE INHIBITOR COMPLEX, SERINE PROTEASE, KRINGLE, KEYWDS 2 HYDROLASE, BLOOD COAGULATION, BLOOD CLOTTING, CONVERTION OF KEYWDS 3 FIBRINOGEN TO FIBRIN, BLOOD CLOTTING INHIBITOR, THROMBIN INHIBITOR, KEYWDS 4 GLYCOSYLATION, BLOOD EXPDTA X-RAY DIFFRACTION AUTHOR E.RUEHMANN,A.HEINE,G.KLEBE REVDAT 5 06-DEC-23 4E7R 1 REMARK REVDAT 4 13-SEP-23 4E7R 1 HETSYN REVDAT 3 29-JUL-20 4E7R 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 17-AUG-16 4E7R 1 JRNL HETATM REVDAT 1 20-JUN-12 4E7R 0 JRNL AUTH M.HAMMAMI,E.RUEHMANN,M.MAUERER,A.HEINE,M.GUETSCHOW,G.KLEBE, JRNL AUTH 2 T.STEINMETZER JRNL TITL NEW 3-AMIDINOPHENYLALANINE-DERIVED INHIBITORS OF MATRIPTASE JRNL REF MEDCHEMCOMM V. 3 807 2012 JRNL REFN ISSN 2040-2503 JRNL DOI 10.1039/C2MD20074K REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.2_869) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 31385 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1590 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.2617 - 4.9884 0.98 2801 148 0.1780 0.1932 REMARK 3 2 4.9884 - 3.9625 0.98 2774 154 0.1231 0.1621 REMARK 3 3 3.9625 - 3.4626 0.96 2756 127 0.1606 0.2147 REMARK 3 4 3.4626 - 3.1464 0.97 2724 139 0.1656 0.2107 REMARK 3 5 3.1464 - 2.9211 0.96 2752 157 0.1740 0.2331 REMARK 3 6 2.9211 - 2.7490 0.96 2735 133 0.1757 0.2664 REMARK 3 7 2.7490 - 2.6114 0.95 2674 181 0.1804 0.2506 REMARK 3 8 2.6114 - 2.4978 0.95 2697 130 0.1888 0.2585 REMARK 3 9 2.4978 - 2.4017 0.95 2694 135 0.1951 0.2693 REMARK 3 10 2.4017 - 2.3188 0.94 2705 136 0.2149 0.2506 REMARK 3 11 2.3188 - 2.2460 0.88 2483 150 0.2851 0.3684 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.41 REMARK 3 B_SOL : 57.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.740 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09160 REMARK 3 B22 (A**2) : -2.61070 REMARK 3 B33 (A**2) : 2.70230 REMARK 3 B12 (A**2) : 3.20490 REMARK 3 B13 (A**2) : -6.80740 REMARK 3 B23 (A**2) : -3.09640 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 4926 REMARK 3 ANGLE : 1.168 6680 REMARK 3 CHIRALITY : 0.079 698 REMARK 3 PLANARITY : 0.004 839 REMARK 3 DIHEDRAL : 16.805 1873 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN H AND RESID 16:33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0921 2.9370 15.8746 REMARK 3 T TENSOR REMARK 3 T11: 0.0709 T22: 0.1224 REMARK 3 T33: 0.0893 T12: -0.0248 REMARK 3 T13: 0.0032 T23: -0.0395 REMARK 3 L TENSOR REMARK 3 L11: 3.3062 L22: 2.2800 REMARK 3 L33: 1.5945 L12: -1.3722 REMARK 3 L13: 0.9109 L23: 0.5096 REMARK 3 S TENSOR REMARK 3 S11: 0.0998 S12: 0.0813 S13: -0.4286 REMARK 3 S21: 0.0755 S22: -0.1164 S23: 0.1219 REMARK 3 S31: 0.2239 S32: -0.0075 S33: -0.0427 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN H AND RESID 34:60E ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1050 11.2615 11.5202 REMARK 3 T TENSOR REMARK 3 T11: 0.1181 T22: 0.3205 REMARK 3 T33: 0.1776 T12: 0.0173 REMARK 3 T13: 0.0222 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 2.7393 L22: 0.6162 REMARK 3 L33: 1.4505 L12: 0.0915 REMARK 3 L13: -0.8064 L23: 0.7645 REMARK 3 S TENSOR REMARK 3 S11: 0.0867 S12: 0.7694 S13: -0.0718 REMARK 3 S21: -0.2609 S22: -0.2022 S23: -0.0154 REMARK 3 S31: -0.1788 S32: -0.0614 S33: -0.0219 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN H AND RESID 60F:97A ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.3676 13.0270 9.5816 REMARK 3 T TENSOR REMARK 3 T11: 0.1251 T22: 0.3535 REMARK 3 T33: 0.1588 T12: 0.0009 REMARK 3 T13: 0.0156 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 1.6779 L22: 0.5751 REMARK 3 L33: 0.9184 L12: -0.0946 REMARK 3 L13: 0.4278 L23: 0.3445 REMARK 3 S TENSOR REMARK 3 S11: 0.0042 S12: 0.6645 S13: 0.0644 REMARK 3 S21: -0.1634 S22: 0.1014 S23: -0.1654 REMARK 3 S31: -0.1137 S32: 0.3747 S33: -0.0462 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN H AND RESID 98:162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0612 9.0690 21.1425 REMARK 3 T TENSOR REMARK 3 T11: 0.0735 T22: 0.1399 REMARK 3 T33: 0.1103 T12: 0.0430 REMARK 3 T13: -0.0027 T23: -0.0192 REMARK 3 L TENSOR REMARK 3 L11: 1.9740 L22: 1.0446 REMARK 3 L33: 1.3425 L12: 0.2038 REMARK 3 L13: 0.6639 L23: -0.4802 REMARK 3 S TENSOR REMARK 3 S11: 0.0418 S12: 0.1412 S13: -0.0450 REMARK 3 S21: -0.0701 S22: -0.0744 S23: 0.0053 REMARK 3 S31: 0.0635 S32: 0.0517 S33: 0.0500 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN H AND RESID 163:170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5896 3.1448 38.7808 REMARK 3 T TENSOR REMARK 3 T11: 0.1882 T22: 0.2143 REMARK 3 T33: 0.1011 T12: -0.0158 REMARK 3 T13: -0.0451 T23: 0.0271 REMARK 3 L TENSOR REMARK 3 L11: 7.6174 L22: 4.7122 REMARK 3 L33: 8.2522 L12: -3.8608 REMARK 3 L13: -0.2111 L23: 0.3661 REMARK 3 S TENSOR REMARK 3 S11: 0.2980 S12: -0.2533 S13: -0.3197 REMARK 3 S21: 0.0790 S22: 0.2097 S23: -0.0175 REMARK 3 S31: -0.0657 S32: -0.2345 S33: -0.4863 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN H AND RESID 171:191 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.3575 0.7406 31.3011 REMARK 3 T TENSOR REMARK 3 T11: 0.1357 T22: 0.1246 REMARK 3 T33: 0.1793 T12: 0.0485 REMARK 3 T13: -0.0668 T23: 0.0361 REMARK 3 L TENSOR REMARK 3 L11: 2.5054 L22: 2.0149 REMARK 3 L33: 2.0526 L12: -0.5189 REMARK 3 L13: 1.1994 L23: 0.3173 REMARK 3 S TENSOR REMARK 3 S11: 0.0481 S12: -0.2015 S13: -0.2484 REMARK 3 S21: 0.0254 S22: -0.0057 S23: -0.1895 REMARK 3 S31: 0.0829 S32: 0.0720 S33: 0.0251 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN H AND RESID 192:220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4649 8.2766 25.4630 REMARK 3 T TENSOR REMARK 3 T11: 0.0873 T22: 0.1154 REMARK 3 T33: 0.0682 T12: -0.0166 REMARK 3 T13: 0.0002 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 2.1900 L22: 2.2472 REMARK 3 L33: 1.6819 L12: -1.1279 REMARK 3 L13: -0.5183 L23: 0.1165 REMARK 3 S TENSOR REMARK 3 S11: 0.1090 S12: 0.1738 S13: 0.0223 REMARK 3 S21: -0.0414 S22: -0.0886 S23: -0.0631 REMARK 3 S31: -0.0255 S32: -0.0795 S33: -0.0241 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN H AND RESID 221:246 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2996 15.0919 25.8399 REMARK 3 T TENSOR REMARK 3 T11: 0.0378 T22: 0.1242 REMARK 3 T33: 0.2272 T12: 0.0045 REMARK 3 T13: -0.0068 T23: -0.0392 REMARK 3 L TENSOR REMARK 3 L11: 2.1901 L22: 6.8212 REMARK 3 L33: 2.7381 L12: -0.6478 REMARK 3 L13: 0.4380 L23: -2.3327 REMARK 3 S TENSOR REMARK 3 S11: 0.0579 S12: 0.0594 S13: 0.1236 REMARK 3 S21: 0.0235 S22: -0.0818 S23: -0.0646 REMARK 3 S31: -0.0840 S32: 0.1050 S33: 0.0287 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN G AND RESID 1016:1041 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3361 -7.4740 -11.2982 REMARK 3 T TENSOR REMARK 3 T11: 0.2194 T22: 0.1048 REMARK 3 T33: 0.1437 T12: 0.0079 REMARK 3 T13: -0.1356 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 1.7669 L22: 0.7107 REMARK 3 L33: 1.1995 L12: 0.1378 REMARK 3 L13: -0.6647 L23: 0.3771 REMARK 3 S TENSOR REMARK 3 S11: -0.0256 S12: -0.1154 S13: -0.2529 REMARK 3 S21: 0.3096 S22: 0.0488 S23: -0.2738 REMARK 3 S31: 0.3524 S32: 0.2110 S33: -0.1860 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN G AND RESID 1042:1124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3963 -12.9023 -11.8619 REMARK 3 T TENSOR REMARK 3 T11: 0.2401 T22: 0.0846 REMARK 3 T33: 0.1276 T12: 0.0046 REMARK 3 T13: 0.0202 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.4575 L22: 1.7221 REMARK 3 L33: 0.9126 L12: -0.0110 REMARK 3 L13: 0.2568 L23: 0.2203 REMARK 3 S TENSOR REMARK 3 S11: 0.0072 S12: -0.0625 S13: -0.0514 REMARK 3 S21: 0.5506 S22: 0.0023 S23: 0.0752 REMARK 3 S31: 0.2166 S32: -0.0581 S33: 0.0031 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN G AND RESID 1125:1131 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.9525 -3.4237 -34.4651 REMARK 3 T TENSOR REMARK 3 T11: 0.3244 T22: 0.2329 REMARK 3 T33: 0.1994 T12: 0.0323 REMARK 3 T13: -0.1026 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 3.4744 L22: 7.1055 REMARK 3 L33: 3.6283 L12: -0.4804 REMARK 3 L13: -3.5147 L23: 0.5245 REMARK 3 S TENSOR REMARK 3 S11: 0.0749 S12: 0.1224 S13: 0.1047 REMARK 3 S21: -0.9020 S22: 0.1158 S23: 0.4041 REMARK 3 S31: -0.0487 S32: -0.2307 S33: -0.2620 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN G AND RESID 1132:1162 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3692 -6.4305 -21.9985 REMARK 3 T TENSOR REMARK 3 T11: 0.1425 T22: 0.1345 REMARK 3 T33: 0.2428 T12: 0.0488 REMARK 3 T13: -0.0146 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 0.6733 L22: 1.8475 REMARK 3 L33: 1.4416 L12: 0.1662 REMARK 3 L13: -0.8983 L23: 0.4382 REMARK 3 S TENSOR REMARK 3 S11: 0.0499 S12: -0.1296 S13: -0.0906 REMARK 3 S21: 0.1713 S22: 0.0969 S23: -0.5919 REMARK 3 S31: 0.3316 S32: 0.3388 S33: 0.1070 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ( CHAIN G AND RESID 1163:1170 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6052 -16.5356 -38.5473 REMARK 3 T TENSOR REMARK 3 T11: 0.2847 T22: 0.2393 REMARK 3 T33: 0.1434 T12: 0.0156 REMARK 3 T13: 0.1216 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 3.2472 L22: 2.1153 REMARK 3 L33: 1.5382 L12: -1.4002 REMARK 3 L13: -1.0619 L23: 1.4301 REMARK 3 S TENSOR REMARK 3 S11: 0.0071 S12: 0.1384 S13: 0.0568 REMARK 3 S21: -0.6406 S22: 0.0640 S23: -0.3945 REMARK 3 S31: -0.1216 S32: 0.0078 S33: -0.0622 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: ( CHAIN G AND RESID 1171:1191 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1002 -14.5542 -31.2513 REMARK 3 T TENSOR REMARK 3 T11: 0.1344 T22: 0.1651 REMARK 3 T33: 0.2967 T12: 0.0364 REMARK 3 T13: 0.0875 T23: -0.0858 REMARK 3 L TENSOR REMARK 3 L11: 2.4770 L22: 0.6937 REMARK 3 L33: 2.3687 L12: 0.0041 REMARK 3 L13: 0.0970 L23: 0.1712 REMARK 3 S TENSOR REMARK 3 S11: 0.0836 S12: 0.0429 S13: 0.0403 REMARK 3 S21: -0.2162 S22: 0.0023 S23: -0.4077 REMARK 3 S31: 0.1584 S32: 0.2199 S33: 0.1562 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: ( CHAIN G AND RESID 1192:1237 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1124 -9.0738 -26.2329 REMARK 3 T TENSOR REMARK 3 T11: 0.1248 T22: 0.0860 REMARK 3 T33: 0.1298 T12: -0.0080 REMARK 3 T13: 0.0154 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 1.6402 L22: 2.3343 REMARK 3 L33: 1.8018 L12: 0.1734 REMARK 3 L13: 0.2081 L23: -0.0260 REMARK 3 S TENSOR REMARK 3 S11: -0.0468 S12: 0.0416 S13: -0.2437 REMARK 3 S21: -0.1322 S22: 0.0314 S23: -0.1083 REMARK 3 S31: 0.0400 S32: 0.0668 S33: 0.0115 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: ( CHAIN G AND RESID 1238:1245 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.5746 -12.3733 -17.5788 REMARK 3 T TENSOR REMARK 3 T11: 0.2288 T22: 0.4163 REMARK 3 T33: 0.5433 T12: 0.0019 REMARK 3 T13: 0.1606 T23: -0.0632 REMARK 3 L TENSOR REMARK 3 L11: 3.8127 L22: 4.6232 REMARK 3 L33: 4.9411 L12: 2.4122 REMARK 3 L13: -0.0684 L23: -3.9547 REMARK 3 S TENSOR REMARK 3 S11: 0.1195 S12: -0.4382 S13: 0.0747 REMARK 3 S21: 0.3977 S22: 0.1084 S23: 0.7698 REMARK 3 S31: -0.2971 S32: -1.3968 S33: -0.2270 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN 'H' AND (RESSEQ 16:60F OR RESSEQ REMARK 3 60I: 146 OR RESSEQ 150:244 ) REMARK 3 SELECTION : CHAIN 'G' AND (RESSEQ 1016:1060 OR RESSEQ REMARK 3 1060I:1146 OR RESSEQ 1150:1244 ) REMARK 3 ATOM PAIRS NUMBER : 1933 REMARK 3 RMSD : 0.047 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4E7R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1000071275. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : OTHER REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32856 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.246 REMARK 200 RESOLUTION RANGE LOW (A) : 29.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 13.400 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07800 REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1H8D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG8000, 20MM SODIUM PHOSPHATE, REMARK 280 175MM SODIUM CHLORIDE, PH7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, G, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR L -4 REMARK 465 PHE L -3 REMARK 465 GLY L -2 REMARK 465 SER L -1 REMARK 465 GLY L 0 REMARK 465 ASP L 15 REMARK 465 GLY L 16 REMARK 465 ARG L 17 REMARK 465 THR M 996 REMARK 465 PHE M 997 REMARK 465 GLY M 998 REMARK 465 SER M 999 REMARK 465 GLY M 1000 REMARK 465 ASP M 1015 REMARK 465 GLY M 1016 REMARK 465 ARG M 1017 REMARK 465 THR H 146A REMARK 465 TRP H 146B REMARK 465 THR H 146C REMARK 465 ALA H 146D REMARK 465 ASN H 146E REMARK 465 VAL H 146F REMARK 465 GLY H 146G REMARK 465 LYS H 146H REMARK 465 GLU H 247 REMARK 465 TRP G 1147A REMARK 465 THR G 1147B REMARK 465 ALA G 1147C REMARK 465 ASN G 1147D REMARK 465 VAL G 1147E REMARK 465 GLY G 1147F REMARK 465 LYS G 1147G REMARK 465 GLY G 1246 REMARK 465 GLU G 1247 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU L 1C CG CD OE1 OE2 REMARK 470 LYS L 14A CG CD CE NZ REMARK 470 ARG L 14D CG CD NE CZ NH1 NH2 REMARK 470 GLU M1001C CG CD OE1 OE2 REMARK 470 LYS M1014A CG CD CE NZ REMARK 470 ARG M1014D CG CD NE CZ NH1 NH2 REMARK 470 ASN H 62 CG OD1 ND2 REMARK 470 LYS H 110 CG CD CE NZ REMARK 470 GLU H 127 CG CD OE1 OE2 REMARK 470 LYS H 236 CG CD CE NZ REMARK 470 GLN H 239 CG CD OE1 NE2 REMARK 470 LYS H 240 CG CD CE NZ REMARK 470 ARG G1075 CG CD NE CZ NH1 NH2 REMARK 470 LYS G1110 CG CD CE NZ REMARK 470 LYS G1145 CG CD CE NZ REMARK 470 THR G1147 OG1 CG2 REMARK 470 GLN G1151 CG CD OE1 NE2 REMARK 470 LYS G1236 CG CD CE NZ REMARK 470 GLN G1239 CG CD OE1 NE2 REMARK 470 GLN G1244 CG CD OE1 NE2 REMARK 470 PHE G1245 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU I 558 CG CD OE1 OE2 REMARK 470 GLU I 561 CG CD OE1 OE2 REMARK 470 GLN I 565 CG CD OE1 NE2 REMARK 470 ASP J1555 CG OD1 OD2 REMARK 470 GLU J1558 CG CD OE1 OE2 REMARK 470 GLU J1561 CG CD OE1 OE2 REMARK 470 GLN J1565 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG H 233 NE - CZ - NH1 ANGL. DEV. = -5.2 DEGREES REMARK 500 ARG H 233 NE - CZ - NH2 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG G1233 NE - CZ - NH1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG G1233 NE - CZ - NH2 ANGL. DEV. = -6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE L 7 -86.46 -130.70 REMARK 500 PHE M1007 -84.46 -128.58 REMARK 500 TYR H 60A 82.87 -150.51 REMARK 500 ASN H 60G 83.10 -152.55 REMARK 500 HIS H 71 -54.78 -135.31 REMARK 500 ILE H 79 -57.82 -123.22 REMARK 500 GLU H 97A -71.36 -115.82 REMARK 500 TYR G1060A 82.42 -150.31 REMARK 500 HIS G1071 -55.55 -136.85 REMARK 500 ILE G1079 -57.04 -122.79 REMARK 500 GLU G1097A -74.85 -115.33 REMARK 500 GLU G1097A -73.35 -116.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA H 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS H 169 O REMARK 620 2 THR H 172 O 81.7 REMARK 620 3 HOH H 475 O 88.8 160.5 REMARK 620 4 HOH H 496 O 169.7 96.1 90.2 REMARK 620 5 HOH H 497 O 78.5 88.5 106.3 111.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA H 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG H 221A O REMARK 620 2 LYS H 224 O 101.3 REMARK 620 3 HOH H 420 O 100.7 79.6 REMARK 620 4 HOH H 426 O 97.5 93.6 161.5 REMARK 620 5 HOH H 451 O 161.5 62.7 86.1 75.5 REMARK 620 6 HOH H 504 O 118.1 139.9 98.8 75.2 77.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA G1303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS G1169 O REMARK 620 2 THR G1172 O 80.3 REMARK 620 3 HOH G1464 O 73.7 98.5 REMARK 620 4 HOH G1505 O 157.5 100.5 127.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA G1304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG G1221A O REMARK 620 2 LYS G1224 O 90.5 REMARK 620 3 HOH G1420 O 162.5 72.0 REMARK 620 4 HOH G1449 O 101.0 99.0 82.5 REMARK 620 5 HOH G1498 O 90.8 73.8 84.2 166.3 REMARK 620 6 HOH G1503 O 109.9 156.2 87.2 89.3 93.2 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3QX5 RELATED DB: PDB REMARK 900 THROMBIN INHIBITION BY PYRIDIN DERIVATIVES REMARK 900 RELATED ID: 3QWC RELATED DB: PDB REMARK 900 THROMBIN INHIBITION BY PYRIDIN DERIVATIVES REMARK 900 RELATED ID: 3F68 RELATED DB: PDB REMARK 900 THROMBIN INHIBITION DBREF 4E7R L -4 17 UNP P00734 THRB_HUMAN 328 363 DBREF 4E7R M 996 1017 UNP P00734 THRB_HUMAN 328 363 DBREF 4E7R H 16 247 UNP P00734 THRB_HUMAN 364 622 DBREF 4E7R G 1016 1247 UNP P00734 THRB_HUMAN 364 622 DBREF 4E7R I 555 565 UNP P09945 HIRV2_HIRME 62 72 DBREF 4E7R J 1555 1565 UNP P09945 HIRV2_HIRME 62 72 SEQRES 1 L 36 THR PHE GLY SER GLY GLU ALA ASP CYS GLY LEU ARG PRO SEQRES 2 L 36 LEU PHE GLU LYS LYS SER LEU GLU ASP LYS THR GLU ARG SEQRES 3 L 36 GLU LEU LEU GLU SER TYR ILE ASP GLY ARG SEQRES 1 M 36 THR PHE GLY SER GLY GLU ALA ASP CYS GLY LEU ARG PRO SEQRES 2 M 36 LEU PHE GLU LYS LYS SER LEU GLU ASP LYS THR GLU ARG SEQRES 3 M 36 GLU LEU LEU GLU SER TYR ILE ASP GLY ARG SEQRES 1 H 259 ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO SEQRES 2 H 259 TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU SEQRES 3 H 259 LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU SEQRES 4 H 259 THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS SEQRES 5 H 259 ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS SEQRES 6 H 259 HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE SEQRES 7 H 259 SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN SEQRES 8 H 259 TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS SEQRES 9 H 259 LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO SEQRES 10 H 259 VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU SEQRES 11 H 259 GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN SEQRES 12 H 259 LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN SEQRES 13 H 259 PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU SEQRES 14 H 259 ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR SEQRES 15 H 259 ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY SEQRES 16 H 259 LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO SEQRES 17 H 259 PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN SEQRES 18 H 259 MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP SEQRES 19 H 259 GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS SEQRES 20 H 259 LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLU SEQRES 1 G 259 ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO SEQRES 2 G 259 TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU SEQRES 3 G 259 LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU SEQRES 4 G 259 THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS SEQRES 5 G 259 ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS SEQRES 6 G 259 HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE SEQRES 7 G 259 SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN SEQRES 8 G 259 TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS SEQRES 9 G 259 LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO SEQRES 10 G 259 VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU SEQRES 11 G 259 GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN SEQRES 12 G 259 LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN SEQRES 13 G 259 PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU SEQRES 14 G 259 ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR SEQRES 15 G 259 ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY SEQRES 16 G 259 LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO SEQRES 17 G 259 PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN SEQRES 18 G 259 MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP SEQRES 19 G 259 GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS SEQRES 20 G 259 LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLU SEQRES 1 I 11 ASP PHE GLU GLU ILE PRO GLU GLU TYS LEU GLN SEQRES 1 J 11 ASP PHE GLU GLU ILE PRO GLU GLU TYS LEU GLN MODRES 4E7R ASN G 1060G ASN GLYCOSYLATION SITE MODRES 4E7R ASN H 60G ASN GLYCOSYLATION SITE MODRES 4E7R TYS I 563 TYR O-SULFO-L-TYROSINE MODRES 4E7R TYS J 1563 TYR O-SULFO-L-TYROSINE HET TYS I 563 16 HET TYS J1563 16 HET NAG H 301 14 HET 0NW H 302 40 HET NA H 303 1 HET NA H 304 1 HET PO4 H 305 5 HET GOL H 306 6 HET GOL H 307 6 HET NAG G1301 14 HET 0NW G1302 40 HET NA G1303 1 HET NA G1304 1 HET PO4 G1305 5 HET GOL G1306 6 HETNAM TYS O-SULFO-L-TYROSINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM 0NW 3-[(2S)-3-[4-(2-AMINOETHYL)PIPERIDIN-1-YL]-2-{[(2',4'- HETNAM 2 0NW DICHLOROBIPHENYL-3-YL)SULFONYL]AMINO}-3- HETNAM 3 0NW OXOPROPYL]BENZENECARBOXIMIDAMIDE HETNAM NA SODIUM ION HETNAM PO4 PHOSPHATE ION HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 TYS 2(C9 H11 N O6 S) FORMUL 7 NAG 2(C8 H15 N O6) FORMUL 8 0NW 2(C29 H33 CL2 N5 O3 S) FORMUL 9 NA 4(NA 1+) FORMUL 11 PO4 2(O4 P 3-) FORMUL 12 GOL 3(C3 H8 O3) FORMUL 20 HOH *265(H2 O) HELIX 1 1 PHE L 7 SER L 11 5 5 HELIX 2 2 THR L 14B TYR L 14J 1 9 HELIX 3 3 PHE M 1007 SER M 1011 5 5 HELIX 4 4 THR M 1014B TYR M 1014J 1 9 HELIX 5 5 ALA H 55 CYS H 58 5 4 HELIX 6 6 PRO H 60B ASP H 60E 5 4 HELIX 7 7 THR H 60I ASN H 62 5 3 HELIX 8 8 ASP H 125 LEU H 130 1 9 HELIX 9 9 GLU H 164 SER H 171 1 8 HELIX 10 10 LEU H 234 GLY H 246 1 13 HELIX 11 11 ALA G 1055 CYS G 1058 5 4 HELIX 12 12 PRO G 1060B ASP G 1060E 5 4 HELIX 13 13 THR G 1060I ASN G 1062 5 3 HELIX 14 14 ASP G 1125 LEU G 1130 1 9 HELIX 15 15 GLU G 1164 SER G 1171 1 8 HELIX 16 16 LEU G 1234 PHE G 1245 1 12 HELIX 17 17 PRO I 560 LEU I 564 5 5 HELIX 18 18 PRO J 1560 LEU J 1564 5 5 SHEET 1 A 7 SER H 20 ASP H 21 0 SHEET 2 A 7 GLN H 156 PRO H 161 -1 O VAL H 157 N SER H 20 SHEET 3 A 7 LYS H 135 GLY H 140 -1 N VAL H 138 O VAL H 158 SHEET 4 A 7 PRO H 198 LYS H 202 -1 O VAL H 200 N ARG H 137 SHEET 5 A 7 TRP H 207 TRP H 215 -1 O TYR H 208 N MET H 201 SHEET 6 A 7 GLY H 226 HIS H 230 -1 O PHE H 227 N TRP H 215 SHEET 7 A 7 MET H 180 ALA H 183 -1 N PHE H 181 O TYR H 228 SHEET 1 B 7 GLN H 30 ARG H 35 0 SHEET 2 B 7 GLU H 39 LEU H 46 -1 O LEU H 41 N LEU H 33 SHEET 3 B 7 TRP H 51 THR H 54 -1 O LEU H 53 N SER H 45 SHEET 4 B 7 ALA H 104 LEU H 108 -1 O MET H 106 N VAL H 52 SHEET 5 B 7 LYS H 81 ILE H 90 -1 N GLU H 86 O LYS H 107 SHEET 6 B 7 LEU H 64 ILE H 68 -1 N ILE H 68 O LYS H 81 SHEET 7 B 7 GLN H 30 ARG H 35 -1 N PHE H 34 O LEU H 65 SHEET 1 C 2 LEU H 60 TYR H 60A 0 SHEET 2 C 2 LYS H 60F ASN H 60G-1 O LYS H 60F N TYR H 60A SHEET 1 D 7 SER G1020 ASP G1021 0 SHEET 2 D 7 GLN G1156 PRO G1161 -1 O VAL G1157 N SER G1020 SHEET 3 D 7 LYS G1135 GLY G1140 -1 N VAL G1138 O VAL G1158 SHEET 4 D 7 PRO G1198 LYS G1202 -1 O VAL G1200 N ARG G1137 SHEET 5 D 7 TRP G1207 TRP G1215 -1 O TYR G1208 N MET G1201 SHEET 6 D 7 GLY G1226 HIS G1230 -1 O PHE G1227 N TRP G1215 SHEET 7 D 7 MET G1180 ALA G1183 -1 N PHE G1181 O TYR G1228 SHEET 1 E 7 GLN G1030 ARG G1035 0 SHEET 2 E 7 GLU G1039 LEU G1046 -1 O LEU G1041 N LEU G1033 SHEET 3 E 7 TRP G1051 THR G1054 -1 O LEU G1053 N SER G1045 SHEET 4 E 7 ALA G1104 LEU G1108 -1 O MET G1106 N VAL G1052 SHEET 5 E 7 LYS G1081 ILE G1090 -1 N GLU G1086 O LYS G1107 SHEET 6 E 7 LEU G1064 ILE G1068 -1 N ILE G1068 O LYS G1081 SHEET 7 E 7 GLN G1030 ARG G1035 -1 N PHE G1034 O LEU G1065 SHEET 1 F 2 LEU G1060 TYR G1060A 0 SHEET 2 F 2 LYS G1060F ASN G1060G-1 O LYS G1060F N TYR G1060A SSBOND 1 CYS L 1 CYS H 122 1555 1555 2.04 SSBOND 2 CYS M 1001 CYS G 1122 1555 1555 2.04 SSBOND 3 CYS H 42 CYS H 58 1555 1555 2.04 SSBOND 4 CYS H 168 CYS H 182 1555 1555 2.03 SSBOND 5 CYS H 191 CYS H 220 1555 1555 2.07 SSBOND 6 CYS G 1042 CYS G 1058 1555 1555 2.03 SSBOND 7 CYS G 1168 CYS G 1182 1555 1555 2.04 SSBOND 8 CYS G 1191 CYS G 1220 1555 1555 2.05 LINK ND2 ASN H 60G C1 NAG H 301 1555 1555 1.47 LINK ND2 ASN G1060G C1 NAG G1301 1555 1555 1.43 LINK C GLU I 562 N TYS I 563 1555 1555 1.33 LINK C TYS I 563 N LEU I 564 1555 1555 1.33 LINK C GLU J1562 N TYS J1563 1555 1555 1.33 LINK C TYS J1563 N LEU J1564 1555 1555 1.33 LINK O LYS H 169 NA NA H 303 1555 1555 2.36 LINK O THR H 172 NA NA H 303 1555 1555 2.44 LINK O ARG H 221A NA NA H 304 1555 1555 2.12 LINK O LYS H 224 NA NA H 304 1555 1555 2.42 LINK NA NA H 303 O HOH H 475 1555 1555 2.58 LINK NA NA H 303 O HOH H 496 1555 1555 2.34 LINK NA NA H 303 O HOH H 497 1555 1555 2.38 LINK NA NA H 304 O HOH H 420 1555 1555 2.36 LINK NA NA H 304 O HOH H 426 1555 1555 2.47 LINK NA NA H 304 O HOH H 451 1555 1555 3.08 LINK NA NA H 304 O HOH H 504 1555 1555 2.46 LINK O LYS G1169 NA NA G1303 1555 1555 2.68 LINK O THR G1172 NA NA G1303 1555 1555 2.19 LINK O ARG G1221A NA NA G1304 1555 1555 2.47 LINK O LYS G1224 NA NA G1304 1555 1555 2.48 LINK NA NA G1303 O HOH G1464 1555 1555 2.47 LINK NA NA G1303 O HOH G1505 1555 1555 2.35 LINK NA NA G1304 O HOH G1420 1555 1555 2.57 LINK NA NA G1304 O HOH G1449 1555 1555 2.44 LINK NA NA G1304 O HOH G1498 1555 1555 2.31 LINK NA NA G1304 O HOH G1503 1555 1555 2.30 CISPEP 1 SER H 36A PRO H 37 0 -4.05 CISPEP 2 SER G 1036A PRO G 1037 0 -4.20 CRYST1 50.242 50.284 71.837 97.61 96.61 90.57 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019904 0.000198 0.002354 0.00000 SCALE2 0.000000 0.019888 0.002699 0.00000 SCALE3 0.000000 0.000000 0.014142 0.00000