HEADER HYDROLASE 12-APR-12 4EMN TITLE CRYSTAL STRUCTURE OF RPFB CATALYTIC DOMAIN IN COMPLEX WITH BENZAMIDINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE RESUSCITATION-PROMOTING FACTOR RPFB; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: CATALYTIC DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: MT1038, RPFB, RV1009; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALPHA BETA, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.RUGGIERO,J.MARCHANT,F.SQUEGLIA,V.MAKAROV,A.DE SIMONE,R.BERISIO REVDAT 2 13-SEP-23 4EMN 1 REMARK REVDAT 1 27-FEB-13 4EMN 0 JRNL AUTH A.RUGGIERO,J.MARCHANT,F.SQUEGLIA,V.MAKAROV,A.DE SIMONE, JRNL AUTH 2 R.BERISIO JRNL TITL MOLECULAR DETERMINANTS OF INACTIVATION OF THE RESUSCITATION JRNL TITL 2 PROMOTING FACTOR B FROM MYCOBACTERIUM TUBERCULOSIS. JRNL REF J.BIOMOL.STRUCT.DYN. V. 31 195 2013 JRNL REFN ISSN 0739-1102 JRNL PMID 22831279 JRNL DOI 10.1080/07391102.2012.698243 REMARK 2 REMARK 2 RESOLUTION. 1.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.150 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.129 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 4263 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2402 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 567 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : NULL REMARK 3 NUMBER OF RESTRAINTS : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 ANGLE DISTANCES (A) : 0.030 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4EMN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000071809. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 85254 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.170 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.02100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ENTRY 3EO5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5% PEG8000, 1M AMMONIUM SULFATE, PH REMARK 280 7.5, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.36650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 282 REMARK 465 GLY D 282 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 358 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 362 NE CZ NH1 NH2 REMARK 470 ARG D 362 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 501 O HOH D 515 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 305 CB - CG - CD1 ANGL. DEV. = -4.7 DEGREES REMARK 500 PHE A 311 CB - CG - CD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP A 312 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 323 NE - CZ - NH1 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG A 344 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 362 C - N - CA ANGL. DEV. = -19.4 DEGREES REMARK 500 ARG A 362 CA - CB - CG ANGL. DEV. = -17.4 DEGREES REMARK 500 ARG B 344 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 346 CD - NE - CZ ANGL. DEV. = 9.0 DEGREES REMARK 500 ARG B 346 NH1 - CZ - NH2 ANGL. DEV. = 8.4 DEGREES REMARK 500 ARG B 346 NE - CZ - NH2 ANGL. DEV. = -9.6 DEGREES REMARK 500 ARG B 358 CD - NE - CZ ANGL. DEV. = 8.8 DEGREES REMARK 500 ARG B 358 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 358 NE - CZ - NH2 ANGL. DEV. = 4.6 DEGREES REMARK 500 GLY B 360 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 ALA B 361 C - N - CA ANGL. DEV. = 22.0 DEGREES REMARK 500 ALA B 361 N - CA - CB ANGL. DEV. = -9.6 DEGREES REMARK 500 ARG B 362 N - CA - CB ANGL. DEV. = 13.6 DEGREES REMARK 500 ARG B 362 CD - NE - CZ ANGL. DEV. = -10.7 DEGREES REMARK 500 ARG B 362 NH1 - CZ - NH2 ANGL. DEV. = 11.6 DEGREES REMARK 500 ARG B 362 NE - CZ - NH2 ANGL. DEV. = -13.6 DEGREES REMARK 500 ARG C 344 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 ARG C 358 CD - NE - CZ ANGL. DEV. = 10.4 DEGREES REMARK 500 ARG C 358 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG C 358 NE - CZ - NH2 ANGL. DEV. = -8.1 DEGREES REMARK 500 ASP D 286 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG D 358 CD - NE - CZ ANGL. DEV. = 12.3 DEGREES REMARK 500 ARG D 362 C - N - CA ANGL. DEV. = 15.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 300 80.36 -155.04 REMARK 500 TRP A 352 70.17 -115.86 REMARK 500 ALA B 293 11.61 -141.85 REMARK 500 ASN B 300 85.73 -156.38 REMARK 500 TRP B 352 67.63 -117.92 REMARK 500 ALA B 361 -173.77 -68.32 REMARK 500 ALA C 361 151.75 -35.04 REMARK 500 ALA D 293 12.55 -144.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA D 361 ARG D 362 -146.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN C 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3EO5 RELATED DB: PDB DBREF 4EMN A 282 362 UNP O05594 O05594_MYCTU 282 362 DBREF 4EMN B 282 362 UNP O05594 O05594_MYCTU 282 362 DBREF 4EMN C 282 362 UNP O05594 O05594_MYCTU 282 362 DBREF 4EMN D 282 362 UNP O05594 O05594_MYCTU 282 362 SEQRES 1 A 81 GLY SER ILE TRP ASP ALA ILE ALA GLY CYS GLU ALA GLY SEQRES 2 A 81 GLY ASN TRP ALA ILE ASN THR GLY ASN GLY TYR TYR GLY SEQRES 3 A 81 GLY VAL GLN PHE ASP GLN GLY THR TRP GLU ALA ASN GLY SEQRES 4 A 81 GLY LEU ARG TYR ALA PRO ARG ALA ASP LEU ALA THR ARG SEQRES 5 A 81 GLU GLU GLN ILE ALA VAL ALA GLU VAL THR ARG LEU ARG SEQRES 6 A 81 GLN GLY TRP GLY ALA TRP PRO VAL CYS ALA ALA ARG ALA SEQRES 7 A 81 GLY ALA ARG SEQRES 1 B 81 GLY SER ILE TRP ASP ALA ILE ALA GLY CYS GLU ALA GLY SEQRES 2 B 81 GLY ASN TRP ALA ILE ASN THR GLY ASN GLY TYR TYR GLY SEQRES 3 B 81 GLY VAL GLN PHE ASP GLN GLY THR TRP GLU ALA ASN GLY SEQRES 4 B 81 GLY LEU ARG TYR ALA PRO ARG ALA ASP LEU ALA THR ARG SEQRES 5 B 81 GLU GLU GLN ILE ALA VAL ALA GLU VAL THR ARG LEU ARG SEQRES 6 B 81 GLN GLY TRP GLY ALA TRP PRO VAL CYS ALA ALA ARG ALA SEQRES 7 B 81 GLY ALA ARG SEQRES 1 C 81 GLY SER ILE TRP ASP ALA ILE ALA GLY CYS GLU ALA GLY SEQRES 2 C 81 GLY ASN TRP ALA ILE ASN THR GLY ASN GLY TYR TYR GLY SEQRES 3 C 81 GLY VAL GLN PHE ASP GLN GLY THR TRP GLU ALA ASN GLY SEQRES 4 C 81 GLY LEU ARG TYR ALA PRO ARG ALA ASP LEU ALA THR ARG SEQRES 5 C 81 GLU GLU GLN ILE ALA VAL ALA GLU VAL THR ARG LEU ARG SEQRES 6 C 81 GLN GLY TRP GLY ALA TRP PRO VAL CYS ALA ALA ARG ALA SEQRES 7 C 81 GLY ALA ARG SEQRES 1 D 81 GLY SER ILE TRP ASP ALA ILE ALA GLY CYS GLU ALA GLY SEQRES 2 D 81 GLY ASN TRP ALA ILE ASN THR GLY ASN GLY TYR TYR GLY SEQRES 3 D 81 GLY VAL GLN PHE ASP GLN GLY THR TRP GLU ALA ASN GLY SEQRES 4 D 81 GLY LEU ARG TYR ALA PRO ARG ALA ASP LEU ALA THR ARG SEQRES 5 D 81 GLU GLU GLN ILE ALA VAL ALA GLU VAL THR ARG LEU ARG SEQRES 6 D 81 GLN GLY TRP GLY ALA TRP PRO VAL CYS ALA ALA ARG ALA SEQRES 7 D 81 GLY ALA ARG HET BEN A 401 9 HET BEN A 402 9 HET SO4 A 403 5 HET BEN B 401 9 HET BEN B 402 9 HET SO4 B 403 5 HET BEN C 401 9 HET BEN C 402 9 HETNAM BEN BENZAMIDINE HETNAM SO4 SULFATE ION FORMUL 5 BEN 6(C7 H8 N2) FORMUL 7 SO4 2(O4 S 2-) FORMUL 13 HOH *567(H2 O) HELIX 1 1 SER A 283 GLY A 294 1 12 HELIX 2 2 ASP A 312 ASN A 319 1 8 HELIX 3 3 GLY A 320 TYR A 324 5 5 HELIX 4 4 ARG A 327 ALA A 331 5 5 HELIX 5 5 THR A 332 GLY A 348 1 17 HELIX 6 6 TRP A 349 TRP A 352 5 4 HELIX 7 7 VAL A 354 ALA A 359 1 6 HELIX 8 8 ILE B 284 GLY B 294 1 11 HELIX 9 9 ASP B 312 ASN B 319 1 8 HELIX 10 10 GLY B 320 TYR B 324 5 5 HELIX 11 11 ARG B 327 ALA B 331 5 5 HELIX 12 12 THR B 332 GLY B 348 1 17 HELIX 13 13 VAL B 354 GLY B 360 1 7 HELIX 14 14 SER C 283 GLY C 294 1 12 HELIX 15 15 ASP C 312 ASN C 319 1 8 HELIX 16 16 GLY C 320 TYR C 324 5 5 HELIX 17 17 ARG C 327 ALA C 331 5 5 HELIX 18 18 THR C 332 GLY C 348 1 17 HELIX 19 19 TRP C 349 TRP C 352 5 4 HELIX 20 20 VAL C 354 GLY C 360 1 7 HELIX 21 21 ILE D 284 GLY D 294 1 11 HELIX 22 22 GLN D 313 ASN D 319 1 7 HELIX 23 23 GLY D 320 TYR D 324 5 5 HELIX 24 24 ARG D 327 ALA D 331 5 5 HELIX 25 25 THR D 332 GLY D 348 1 17 HELIX 26 26 TRP D 349 TRP D 352 5 4 HELIX 27 27 VAL D 354 ALA D 359 1 6 SHEET 1 A 2 TYR D 305 TYR D 306 0 SHEET 2 A 2 PHE D 311 ASP D 312 -1 O PHE D 311 N TYR D 306 SSBOND 1 CYS A 291 CYS A 355 1555 1555 2.05 SSBOND 2 CYS B 291 CYS B 355 1555 1555 2.06 SSBOND 3 CYS C 291 CYS C 355 1555 1555 2.04 SSBOND 4 CYS D 291 CYS D 355 1555 1555 2.01 CISPEP 1 GLY C 282 SER C 283 0 6.63 SITE 1 AC1 6 GLN A 310 ASP A 312 ALA A 351 TRP A 352 SITE 2 AC1 6 SO4 A 403 HOH A 504 SITE 1 AC2 8 GLU A 292 ALA A 293 ILE A 299 GLN A 310 SITE 2 AC2 8 HOH A 514 GLU B 292 ILE B 299 HOH B7005 SITE 1 AC3 10 GLU A 292 TRP A 352 PRO A 353 VAL A 354 SITE 2 AC3 10 CYS A 355 BEN A 401 HOH A 504 HOH A 508 SITE 3 AC3 10 HOH A 566 BEN B 401 SITE 1 AC4 6 VAL A 354 SO4 A 403 ASN B 303 GLY B 304 SITE 2 AC4 6 TYR B 305 HOH B7083 SITE 1 AC5 8 TYR B 305 GLN B 310 ASP B 312 THR B 315 SITE 2 AC5 8 ALA B 351 TRP B 352 SO4 B 403 HOH B7012 SITE 1 AC6 10 GLU B 292 TRP B 352 PRO B 353 VAL B 354 SITE 2 AC6 10 CYS B 355 BEN B 402 HOH B7010 HOH B7012 SITE 3 AC6 10 HOH B7070 HOH B7090 SITE 1 AC7 6 HOH A 626 TYR C 324 GLU C 334 GLU C 335 SITE 2 AC7 6 HOH C 576 HOH C 615 SITE 1 AC8 8 TYR C 305 GLN C 310 ASP C 312 THR C 315 SITE 2 AC8 8 ALA C 351 TRP C 352 HOH C 532 HOH C 547 CRYST1 42.545 50.733 66.421 90.00 104.09 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023505 0.000000 0.005900 0.00000 SCALE2 0.000000 0.019711 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015522 0.00000