HEADER DNA BINDING PROTEIN 14-APR-12 4EOG TITLE CRYSTAL STRUCTURE OF CSX1 OF PYROCOCCUS FURIOSUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CSX1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 186497; SOURCE 4 STRAIN: DSM 3638; SOURCE 5 GENE: CSX1, PF1127; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS BETA-HAIRPIN, NUCLEIC ACID BINDING PROTEIN, RNA BINDING, DNA BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.K.KIM,B.H.OH REVDAT 2 24-JUL-13 4EOG 1 JRNL REVDAT 1 02-JAN-13 4EOG 0 JRNL AUTH Y.K.KIM,Y.G.KIM,B.H.OH JRNL TITL CRYSTAL STRUCTURE AND NUCLEIC ACID-BINDING ACTIVITY OF THE JRNL TITL 2 CRISPR-ASSOCIATED PROTEIN CSX1 OF PYROCOCCUS FURIOSUS. JRNL REF PROTEINS V. 81 261 2013 JRNL REFN ISSN 0887-3585 JRNL PMID 22987782 JRNL DOI 10.1002/PROT.24183 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 63733.320 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 22391 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2223 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2979 REMARK 3 BIN R VALUE (WORKING SET) : 0.3910 REMARK 3 BIN FREE R VALUE : 0.3840 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 339 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.021 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3852 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 71 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.40000 REMARK 3 B22 (A**2) : -8.75000 REMARK 3 B33 (A**2) : 8.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.58 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.57 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.30 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.84 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.270 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.170 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.880 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.840 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.32 REMARK 3 BSOL : 25.40 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 4EOG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-APR-12. REMARK 100 THE RCSB ID CODE IS RCSB071872. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-DEC-10; 01-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 93.0; NULL REMARK 200 PH : 5.8; 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N; Y REMARK 200 RADIATION SOURCE : ROTATING ANODE; SPRING-8 REMARK 200 BEAMLINE : NULL; BL26B2 REMARK 200 X-RAY GENERATOR MODEL : RIGAKU; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418; 0.9896 REMARK 200 MONOCHROMATOR : WIGGLER; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE; CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU; ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22968 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES, 0.01 M ZINC SULFATE, 6 % REMARK 280 PEG MME 550, PH 5.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K. 0.1 M MES, 0.01 M ZINC SULFATE, 6 % PEG MME 550, PH 6.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.29500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.29500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 25.91000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 89.76500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 25.91000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 89.76500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.29500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 25.91000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 89.76500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.29500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 25.91000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 89.76500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -156.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -55.29500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 GLY A 2 REMARK 465 PHE A 414 REMARK 465 SER A 415 REMARK 465 PRO A 416 REMARK 465 SER A 417 REMARK 465 GLY A 418 REMARK 465 GLU A 419 REMARK 465 ARG A 420 REMARK 465 ILE A 421 REMARK 465 GLU A 422 REMARK 465 THR A 423 REMARK 465 ILE A 424 REMARK 465 GLU A 425 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 353 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 394 CG CD OE1 OE2 REMARK 470 LYS A 400 CG CD CE NZ REMARK 470 ARG A 450 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 453 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 372 O HOH A 650 5445 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 23 123.11 -173.39 REMARK 500 SER A 30 -179.02 -174.04 REMARK 500 GLU A 93 -57.96 -135.75 REMARK 500 ASP A 102 70.43 -161.73 REMARK 500 ASP A 115 -176.51 -62.53 REMARK 500 ASN A 158 42.02 74.95 REMARK 500 ASN A 170 -91.39 -113.00 REMARK 500 LEU A 344 79.24 -107.34 REMARK 500 PRO A 345 -55.58 -28.53 REMARK 500 ASP A 385 107.34 -53.13 REMARK 500 THR A 411 -149.68 -140.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ILE A 169 23.8 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 283 OE1 REMARK 620 2 GLU A 297 OE1 87.8 REMARK 620 3 GLU A 297 OE2 92.2 52.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 504 REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE REFERENCE FOR THIS PROTEIN DOES NOT CURRENTLY EXIST IN REMARK 999 UNIPROT DBREF 4EOG A 1 480 PDB 4EOG 4EOG 1 480 SEQRES 1 A 480 MSE GLY MSE ARG VAL LEU VAL THR THR TRP GLY ASN PRO SEQRES 2 A 480 PHE GLN TRP GLU PRO ILE THR TYR GLU TYR ARG GLY ILE SEQRES 3 A 480 LYS VAL LYS SER ARG ASN THR LEU PRO ILE LEU VAL LYS SEQRES 4 A 480 THR LEU GLU PRO GLU ARG ILE LEU ILE LEU VAL ALA ASP SEQRES 5 A 480 THR MSE ALA ASN TYR TYR ASP SER GLY LYS ASN LYS PRO SEQRES 6 A 480 GLU ILE GLU GLU LYS SER PHE SER SER TYR SER GLU VAL SEQRES 7 A 480 VAL GLU ASP THR LYS GLU ARG ILE LEU TRP HIS ILE LYS SEQRES 8 A 480 GLU GLU VAL ILE GLU GLU LEU ARG GLU GLU ASP PRO GLU SEQRES 9 A 480 LEU ALA LYS LYS ILE GLU ASN MSE LEU LYS ASP GLU ARG SEQRES 10 A 480 ILE THR ILE GLU VAL LEU PRO GLY VAL GLY VAL PHE GLY SEQRES 11 A 480 ASN ILE THR VAL GLU GLY GLU MSE LEU ASP PHE TYR TYR SEQRES 12 A 480 TYR ALA THR TYR LYS LEU ALA GLU TRP LEU PRO VAL GLN SEQRES 13 A 480 ASN ASN LEU GLU VAL TYR LEU ASP LEU THR HIS GLY ILE SEQRES 14 A 480 ASN PHE MSE PRO THR PHE THR TYR ARG ALA LEU ARG ASN SEQRES 15 A 480 LEU LEU GLY LEU LEU ALA TYR LEU TYR ASN VAL LYS PHE SEQRES 16 A 480 GLU ILE VAL ASN SER GLU PRO TYR PRO LEU GLY VAL SER SEQRES 17 A 480 GLN GLU ILE ARG GLU ASP THR ILE LEU HIS ILE ARG GLU SEQRES 18 A 480 ILE GLY GLU GLY VAL VAL ARG PRO ARG PRO GLN TYR SER SEQRES 19 A 480 PRO VAL GLU GLY LYS LEU TYR TRP ASN ALA PHE ILE SER SEQRES 20 A 480 SER VAL ALA ASN GLY PHE PRO LEU VAL PHE ALA SER PHE SEQRES 21 A 480 TYR PRO ASN ILE ARG ASP VAL GLU ASP TYR LEU ASN LYS SEQRES 22 A 480 LYS LEU GLU GLU PHE LEU VAL GLY ILE GLU VAL GLY GLU SEQRES 23 A 480 ARG GLU ASP GLY LYS PRO TYR VAL LYS ARG GLU LYS ALA SEQRES 24 A 480 LEU ASP ARG SER PHE LYS ASN ALA SER LYS LEU TYR TYR SEQRES 25 A 480 ALA LEU ARG VAL PHE ASN THR LYS PHE GLN ASN TYR PRO SEQRES 26 A 480 LYS LYS GLU VAL PRO ILE GLU GLU ILE MSE GLU ILE SER SEQRES 27 A 480 LYS ILE PHE GLU SER LEU PRO ARG ILE GLY ILE ILE LEU SEQRES 28 A 480 GLU ARG GLN VAL GLU TRP LEU ARG ASN LEU VAL TYR GLY SEQRES 29 A 480 ARG LEU TRP TYR GLU ASN GLY GLU GLN LYS ILE LYS LYS SEQRES 30 A 480 GLY LEU LEU GLU ILE ILE LYS ASP LYS LYS ASP LYS ARG SEQRES 31 A 480 LYS GLU ALA GLU ALA LEU LYS LYS GLY LYS THR ILE SER SEQRES 32 A 480 LEU ALA GLU ALA ALA LYS LEU THR ARG ILE PHE SER PRO SEQRES 33 A 480 SER GLY GLU ARG ILE GLU THR ILE GLU SER PRO ASN VAL SEQRES 34 A 480 VAL ARG ASN PHE ILE ALA HIS SER GLY PHE GLU TYR ASN SEQRES 35 A 480 ILE VAL TYR VAL LYS TYR ASP ARG LEU SER ASP ARG LEU SEQRES 36 A 480 TYR PHE PHE TYR LYS ASP LYS GLU LYS ALA ALA ASN LEU SEQRES 37 A 480 ALA TYR GLU ALA LEU LEU TYR ARG GLY GLU LYS GLU MODRES 4EOG MSE A 3 MET SELENOMETHIONINE MODRES 4EOG MSE A 54 MET SELENOMETHIONINE MODRES 4EOG MSE A 112 MET SELENOMETHIONINE MODRES 4EOG MSE A 138 MET SELENOMETHIONINE MODRES 4EOG MSE A 172 MET SELENOMETHIONINE MODRES 4EOG MSE A 335 MET SELENOMETHIONINE HET MSE A 3 8 HET MSE A 54 8 HET MSE A 112 8 HET MSE A 138 8 HET MSE A 172 8 HET MSE A 335 8 HET ZN A 501 1 HET ZN A 502 1 HET ZN A 503 1 HET SO4 A 504 5 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 ZN 3(ZN 2+) FORMUL 5 SO4 O4 S 2- FORMUL 6 HOH *71(H2 O) HELIX 1 1 ASN A 12 TRP A 16 5 5 HELIX 2 2 THR A 33 GLU A 42 1 10 HELIX 3 3 THR A 53 ALA A 55 5 3 HELIX 4 4 SER A 74 GLU A 93 1 20 HELIX 5 5 ILE A 95 GLU A 101 5 7 HELIX 6 6 ASP A 102 ASP A 115 1 14 HELIX 7 7 MSE A 138 LEU A 153 1 16 HELIX 8 8 PHE A 171 ALA A 188 1 18 HELIX 9 9 SER A 208 ASP A 214 1 7 HELIX 10 10 LYS A 239 GLY A 252 1 14 HELIX 11 11 PHE A 253 PHE A 260 1 8 HELIX 12 12 ASN A 263 VAL A 280 1 18 HELIX 13 13 ASP A 301 ASN A 318 1 18 HELIX 14 14 ILE A 331 LYS A 339 1 9 HELIX 15 15 ILE A 340 SER A 343 5 4 HELIX 16 16 LEU A 344 TYR A 363 1 20 HELIX 17 17 GLY A 378 ASP A 385 1 8 HELIX 18 18 ARG A 390 GLY A 399 1 10 HELIX 19 19 LEU A 404 LEU A 410 1 7 HELIX 20 20 ASN A 428 HIS A 436 1 9 HELIX 21 21 ASP A 461 TYR A 475 1 15 SHEET 1 A 8 ILE A 26 SER A 30 0 SHEET 2 A 8 ILE A 19 TYR A 23 -1 N ILE A 19 O SER A 30 SHEET 3 A 8 ILE A 216 GLU A 221 1 O LEU A 217 N GLU A 22 SHEET 4 A 8 VAL A 193 SER A 200 -1 N ASN A 199 O ARG A 220 SHEET 5 A 8 LEU A 159 HIS A 167 1 N LEU A 163 O GLU A 196 SHEET 6 A 8 ARG A 4 TRP A 10 1 N VAL A 7 O ASP A 164 SHEET 7 A 8 ARG A 45 ALA A 51 1 O LEU A 49 N TRP A 10 SHEET 8 A 8 ILE A 118 LEU A 123 1 O GLU A 121 N ILE A 48 SHEET 1 B 5 ILE A 26 SER A 30 0 SHEET 2 B 5 ILE A 19 TYR A 23 -1 N ILE A 19 O SER A 30 SHEET 3 B 5 ILE A 216 GLU A 221 1 O LEU A 217 N GLU A 22 SHEET 4 B 5 VAL A 193 SER A 200 -1 N ASN A 199 O ARG A 220 SHEET 5 B 5 GLY A 225 VAL A 226 -1 O GLY A 225 N PHE A 195 SHEET 1 C 4 GLY A 127 VAL A 128 0 SHEET 2 C 4 THR A 133 GLU A 135 -1 O VAL A 134 N GLY A 127 SHEET 3 C 4 PRO A 292 ARG A 296 1 O VAL A 294 N GLU A 135 SHEET 4 C 4 ILE A 282 GLU A 286 -1 N GLU A 283 O LYS A 295 SHEET 1 D 4 VAL A 329 PRO A 330 0 SHEET 2 D 4 ARG A 454 TYR A 459 -1 O PHE A 457 N VAL A 329 SHEET 3 D 4 VAL A 444 ASP A 449 -1 N TYR A 445 O PHE A 458 SHEET 4 D 4 ILE A 402 SER A 403 -1 N ILE A 402 O VAL A 446 SHEET 1 E 2 GLY A 364 GLU A 369 0 SHEET 2 E 2 GLU A 372 LYS A 377 -1 O LYS A 374 N TRP A 367 LINK C MSE A 3 N ARG A 4 1555 1555 1.33 LINK C THR A 53 N MSE A 54 1555 1555 1.32 LINK C MSE A 54 N ALA A 55 1555 1555 1.33 LINK C ASN A 111 N MSE A 112 1555 1555 1.33 LINK C MSE A 112 N LEU A 113 1555 1555 1.33 LINK C GLU A 137 N MSE A 138 1555 1555 1.32 LINK C MSE A 138 N LEU A 139 1555 1555 1.33 LINK C PHE A 171 N MSE A 172 1555 1555 1.33 LINK C MSE A 172 N PRO A 173 1555 1555 1.35 LINK C ILE A 334 N MSE A 335 1555 1555 1.33 LINK C MSE A 335 N GLU A 336 1555 1555 1.33 LINK OE1 GLU A 283 ZN ZN A 503 1555 1555 2.25 LINK OE1 GLU A 297 ZN ZN A 503 1555 1555 2.42 LINK OE2 GLU A 297 ZN ZN A 503 1555 1555 2.54 CISPEP 1 LYS A 64 PRO A 65 0 0.29 CISPEP 2 TYR A 324 PRO A 325 0 0.63 SITE 1 AC1 3 ASP A 214 GLU A 288 HOH A 632 SITE 1 AC2 1 HIS A 436 SITE 1 AC3 4 GLU A 135 HIS A 218 GLU A 283 GLU A 297 SITE 1 AC4 8 TYR A 142 ARG A 178 ASN A 182 LYS A 305 SITE 2 AC4 8 LYS A 309 HOH A 612 HOH A 615 HOH A 652 CRYST1 51.820 179.530 110.590 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019298 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005570 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009042 0.00000 HETATM 1 N MSE A 3 -6.804 30.469 -4.866 1.00 50.64 N HETATM 2 CA MSE A 3 -6.196 31.825 -4.763 1.00 50.30 C HETATM 3 C MSE A 3 -6.360 32.626 -6.052 1.00 48.45 C HETATM 4 O MSE A 3 -6.397 32.073 -7.153 1.00 47.03 O HETATM 5 CB MSE A 3 -4.718 31.704 -4.414 1.00 54.40 C HETATM 6 CG MSE A 3 -4.030 33.029 -4.169 1.00 61.84 C HETATM 7 SE MSE A 3 -2.179 32.831 -3.608 1.00 77.27 SE HETATM 8 CE MSE A 3 -2.434 33.005 -1.675 1.00 71.30 C