data_4EW5 # _entry.id 4EW5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4EW5 RCSB RCSB072143 WWPDB D_1000072143 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id MCSG-APC101781 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4EW5 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-04-26 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Osipiuk, J.' 1 'Xu, X.' 2 'Cui, H.' 3 'Brown, R.N.' 4 'Cort, J.R.' 5 'Heffron, F.' 6 'Nakayasu, E.S.' 7 'Niemann, G.S.' 8 'Merkley, E.D.' 9 'Savchenko, A.' 10 'Adkins, J.N.' 11 'Joachimiak, A.' 12 'Midwest Center for Structural Genomics (MCSG)' 13 'Program for the Characterization of Secreted Effector Proteins (PCSEP)' 14 # _citation.id primary _citation.title 'C-terminal domain of inner membrane protein CigR from Salmonella enterica.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Osipiuk, J.' 1 primary 'Xu, X.' 2 primary 'Cui, H.' 3 primary 'Brown, R.N.' 4 primary 'Cort, J.R.' 5 primary 'Heffron, F.' 6 primary 'Nakayasu, E.S.' 7 primary 'Niemann, G.S.' 8 primary 'Merkley, E.D.' 9 primary 'Savchenko, A.' 10 primary 'Adkins, J.N.' 11 primary 'Joachimiak, A.' 12 # _cell.length_a 49.870 _cell.length_b 54.811 _cell.length_c 73.992 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4EW5 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 4EW5 _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CigR Protein' 10894.444 2 ? ? 'C-terminal domain' ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 3 water nat water 18.015 145 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Putative inner membrane protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;HRKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS(MSE)LGQLPYYPGYEWKI VGDNLVLIALSTAVVTAIINGVFDLE ; _entity_poly.pdbx_seq_one_letter_code_can ;HRKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDN LVLIALSTAVVTAIINGVFDLE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier MCSG-APC101781 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 ARG n 1 3 LYS n 1 4 ASN n 1 5 GLY n 1 6 GLY n 1 7 LYS n 1 8 PRO n 1 9 ASP n 1 10 HIS n 1 11 VAL n 1 12 GLU n 1 13 SER n 1 14 ASP n 1 15 ILE n 1 16 SER n 1 17 TYR n 1 18 ALA n 1 19 VAL n 1 20 ALA n 1 21 ARG n 1 22 GLN n 1 23 LEU n 1 24 ALA n 1 25 VAL n 1 26 ASN n 1 27 LEU n 1 28 GLY n 1 29 LEU n 1 30 THR n 1 31 GLY n 1 32 TYR n 1 33 GLN n 1 34 SER n 1 35 LEU n 1 36 PRO n 1 37 PRO n 1 38 GLY n 1 39 ILE n 1 40 ALA n 1 41 LYS n 1 42 ASN n 1 43 LEU n 1 44 ALA n 1 45 ARG n 1 46 GLY n 1 47 LYS n 1 48 PRO n 1 49 LEU n 1 50 PRO n 1 51 PRO n 1 52 GLY n 1 53 ILE n 1 54 ALA n 1 55 LYS n 1 56 LYS n 1 57 THR n 1 58 VAL n 1 59 PRO n 1 60 ALA n 1 61 SER n 1 62 MSE n 1 63 LEU n 1 64 GLY n 1 65 GLN n 1 66 LEU n 1 67 PRO n 1 68 TYR n 1 69 TYR n 1 70 PRO n 1 71 GLY n 1 72 TYR n 1 73 GLU n 1 74 TRP n 1 75 LYS n 1 76 ILE n 1 77 VAL n 1 78 GLY n 1 79 ASP n 1 80 ASN n 1 81 LEU n 1 82 VAL n 1 83 LEU n 1 84 ILE n 1 85 ALA n 1 86 LEU n 1 87 SER n 1 88 THR n 1 89 ALA n 1 90 VAL n 1 91 VAL n 1 92 THR n 1 93 ALA n 1 94 ILE n 1 95 ILE n 1 96 ASN n 1 97 GLY n 1 98 VAL n 1 99 PHE n 1 100 ASP n 1 101 LEU n 1 102 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'cigR, STM3762' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain LT2 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Salmonella enterica subsp. enterica serovar Typhimurium' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 99287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET21b-L No TEV' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9Z621_SALTY _struct_ref.pdbx_db_accession Q9Z621 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;HRKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDN LVLIALSTAVVTAIINGVFD ; _struct_ref.pdbx_align_begin 60 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4EW5 A 1 ? 100 ? Q9Z621 60 ? 159 ? 60 159 2 1 4EW5 B 1 ? 100 ? Q9Z621 60 ? 159 ? 60 159 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4EW5 LEU A 101 ? UNP Q9Z621 ? ? 'EXPRESSION TAG' 160 1 1 4EW5 GLU A 102 ? UNP Q9Z621 ? ? 'EXPRESSION TAG' 161 2 2 4EW5 LEU B 101 ? UNP Q9Z621 ? ? 'EXPRESSION TAG' 160 3 2 4EW5 GLU B 102 ? UNP Q9Z621 ? ? 'EXPRESSION TAG' 161 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4EW5 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.pdbx_details ;0.1M Hepes buffer, 2% PEG-400, 2M Ammonium sulphate. Full length protein was crystallized in presence of V8 protease., pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-10-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 4EW5 _reflns.d_resolution_high 1.870 _reflns.d_resolution_low 41.4 _reflns.number_obs 17270 _reflns.pdbx_Rmerge_I_obs 0.107 _reflns.pdbx_netI_over_sigmaI 8.900 _reflns.pdbx_chi_squared 2.551 _reflns.pdbx_redundancy 6.800 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 17270 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 36.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.880 1.910 ? ? ? 0.811 2.2 ? 1.051 5.600 ? 860 100.000 1 1 1.910 1.950 ? ? ? 0.595 ? ? 1.078 6.200 ? 839 100.000 2 1 1.950 1.980 ? ? ? 0.603 ? ? 1.091 7.000 ? 841 100.000 3 1 1.980 2.030 ? ? ? 0.481 ? ? 1.112 7.100 ? 857 100.000 4 1 2.030 2.070 ? ? ? 0.413 ? ? 1.251 7.100 ? 830 100.000 5 1 2.070 2.120 ? ? ? 0.360 ? ? 1.350 7.100 ? 863 100.000 6 1 2.120 2.170 ? ? ? 0.301 ? ? 1.453 7.100 ? 830 100.000 7 1 2.170 2.230 ? ? ? 0.294 ? ? 1.506 7.100 ? 858 100.000 8 1 2.230 2.290 ? ? ? 0.229 ? ? 1.814 7.100 ? 867 100.000 9 1 2.290 2.370 ? ? ? 0.206 ? ? 1.816 7.100 ? 845 100.000 10 1 2.370 2.450 ? ? ? 0.190 ? ? 1.823 7.100 ? 841 100.000 11 1 2.450 2.550 ? ? ? 0.164 ? ? 2.081 7.100 ? 875 100.000 12 1 2.550 2.670 ? ? ? 0.142 ? ? 2.258 7.000 ? 854 100.000 13 1 2.670 2.810 ? ? ? 0.129 ? ? 2.386 7.100 ? 855 99.900 14 1 2.810 2.980 ? ? ? 0.109 ? ? 2.915 7.000 ? 870 100.000 15 1 2.980 3.210 ? ? ? 0.096 ? ? 3.658 6.900 ? 864 100.000 16 1 3.210 3.540 ? ? ? 0.087 ? ? 4.375 6.700 ? 880 100.000 17 1 3.540 4.050 ? ? ? 0.078 ? ? 5.225 6.600 ? 881 100.000 18 1 4.050 5.100 ? ? ? 0.072 ? ? 5.658 6.400 ? 898 100.000 19 1 5.100 50.000 ? ? ? 0.072 ? ? 6.951 6.300 ? 962 99.100 20 1 # _refine.entry_id 4EW5 _refine.ls_d_res_high 1.8700 _refine.ls_d_res_low 41.4 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.4900 _refine.ls_number_reflns_obs 17222 _refine.ls_number_reflns_all 17222 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.ls_R_factor_all 0.1783 _refine.ls_R_factor_obs 0.1783 _refine.ls_R_factor_R_work 0.1757 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2301 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 871 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 31.4572 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.4800 _refine.aniso_B[2][2] -0.9000 _refine.aniso_B[3][3] 0.4200 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9640 _refine.correlation_coeff_Fo_to_Fc_free 0.9370 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.1400 _refine.pdbx_overall_ESU_R_Free 0.1410 _refine.overall_SU_ML 0.0910 _refine.overall_SU_B 5.7980 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 75.970 _refine.B_iso_min 17.030 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.400 _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1483 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 145 _refine_hist.number_atoms_total 1636 _refine_hist.d_res_high 1.8700 _refine_hist.d_res_low 41.4 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1573 0.019 0.020 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1075 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2154 1.830 2.005 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2663 1.036 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 213 6.253 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 52 33.181 24.038 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 258 14.115 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 7 20.231 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 251 0.116 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1732 0.010 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 283 0.001 0.020 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.8720 _refine_ls_shell.d_res_low 1.9200 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 93.2800 _refine_ls_shell.number_reflns_R_work 1014 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2430 _refine_ls_shell.R_factor_R_free 0.3240 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 55 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1069 _refine_ls_shell.number_reflns_obs 1069 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4EW5 _struct.title 'C-terminal domain of inner membrane protein CigR from Salmonella enterica.' _struct.pdbx_descriptor 'CigR Protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4EW5 _struct_keywords.text ;inner membrane protein, structural genomics, APC101781, PSI-Biology, Midwest Center for Structural Genomics, MCSG, Program for the Characterization of Secreted Effector Proteins, PCSEP, MEMBRANE PROTEIN ; _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 10 ? LEU A 27 ? HIS A 69 LEU A 86 1 ? 18 HELX_P HELX_P2 2 PRO A 59 ? GLY A 64 ? PRO A 118 GLY A 123 1 ? 6 HELX_P HELX_P3 3 HIS B 10 ? LEU B 27 ? HIS B 69 LEU B 86 1 ? 18 HELX_P HELX_P4 4 PRO B 36 ? LYS B 41 ? PRO B 95 LYS B 100 1 ? 6 HELX_P HELX_P5 5 PRO B 59 ? GLY B 64 ? PRO B 118 GLY B 123 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A SER 61 C ? ? ? 1_555 A MSE 62 N ? ? A SER 120 A MSE 121 1_555 ? ? ? ? ? ? ? 1.322 ? covale2 covale ? ? A MSE 62 C ? ? ? 1_555 A LEU 63 N ? ? A MSE 121 A LEU 122 1_555 ? ? ? ? ? ? ? 1.317 ? covale3 covale ? ? B SER 61 C ? ? ? 1_555 B MSE 62 N ? ? B SER 120 B MSE 121 1_555 ? ? ? ? ? ? ? 1.316 ? covale4 covale ? ? B MSE 62 C ? ? ? 1_555 B LEU 63 N ? ? B MSE 121 B LEU 122 1_555 ? ? ? ? ? ? ? 1.315 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 56 ? THR A 57 ? LYS A 115 THR A 116 A 2 TYR A 72 ? VAL A 77 ? TYR A 131 VAL A 136 A 3 ASN A 80 ? ALA A 85 ? ASN A 139 ALA A 144 A 4 VAL A 91 ? ILE A 95 ? VAL A 150 ILE A 154 B 1 LYS B 56 ? THR B 57 ? LYS B 115 THR B 116 B 2 TYR B 72 ? VAL B 77 ? TYR B 131 VAL B 136 B 3 ASN B 80 ? ALA B 85 ? ASN B 139 ALA B 144 B 4 VAL B 91 ? ILE B 95 ? VAL B 150 ILE B 154 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 56 ? N LYS A 115 O ILE A 76 ? O ILE A 135 A 2 3 N LYS A 75 ? N LYS A 134 O VAL A 82 ? O VAL A 141 A 3 4 N LEU A 83 ? N LEU A 142 O THR A 92 ? O THR A 151 B 1 2 N LYS B 56 ? N LYS B 115 O ILE B 76 ? O ILE B 135 B 2 3 N LYS B 75 ? N LYS B 134 O VAL B 82 ? O VAL B 141 B 3 4 N LEU B 81 ? N LEU B 140 O ILE B 95 ? O ILE B 154 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 501' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 TYR A 17 ? TYR A 76 . ? 1_555 ? 2 AC1 3 ARG A 21 ? ARG A 80 . ? 1_555 ? 3 AC1 3 GLN B 33 ? GLN B 92 . ? 3_555 ? 4 AC2 4 HIS B 10 ? HIS B 69 . ? 1_555 ? 5 AC2 4 VAL B 11 ? VAL B 70 . ? 1_555 ? 6 AC2 4 GLU B 12 ? GLU B 71 . ? 1_555 ? 7 AC2 4 SER B 13 ? SER B 72 . ? 1_555 ? # _atom_sites.entry_id 4EW5 _atom_sites.fract_transf_matrix[1][1] 0.020052 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018245 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013515 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 60 60 HIS HIS A . n A 1 2 ARG 2 61 61 ARG ARG A . n A 1 3 LYS 3 62 62 LYS LYS A . n A 1 4 ASN 4 63 63 ASN ASN A . n A 1 5 GLY 5 64 64 GLY GLY A . n A 1 6 GLY 6 65 65 GLY GLY A . n A 1 7 LYS 7 66 66 LYS LYS A . n A 1 8 PRO 8 67 67 PRO PRO A . n A 1 9 ASP 9 68 68 ASP ASP A . n A 1 10 HIS 10 69 69 HIS HIS A . n A 1 11 VAL 11 70 70 VAL VAL A . n A 1 12 GLU 12 71 71 GLU GLU A . n A 1 13 SER 13 72 72 SER SER A . n A 1 14 ASP 14 73 73 ASP ASP A . n A 1 15 ILE 15 74 74 ILE ILE A . n A 1 16 SER 16 75 75 SER SER A . n A 1 17 TYR 17 76 76 TYR TYR A . n A 1 18 ALA 18 77 77 ALA ALA A . n A 1 19 VAL 19 78 78 VAL VAL A . n A 1 20 ALA 20 79 79 ALA ALA A . n A 1 21 ARG 21 80 80 ARG ARG A . n A 1 22 GLN 22 81 81 GLN GLN A . n A 1 23 LEU 23 82 82 LEU LEU A . n A 1 24 ALA 24 83 83 ALA ALA A . n A 1 25 VAL 25 84 84 VAL VAL A . n A 1 26 ASN 26 85 85 ASN ASN A . n A 1 27 LEU 27 86 86 LEU LEU A . n A 1 28 GLY 28 87 87 GLY GLY A . n A 1 29 LEU 29 88 88 LEU LEU A . n A 1 30 THR 30 89 89 THR THR A . n A 1 31 GLY 31 90 90 GLY GLY A . n A 1 32 TYR 32 91 91 TYR TYR A . n A 1 33 GLN 33 92 92 GLN GLN A . n A 1 34 SER 34 93 93 SER SER A . n A 1 35 LEU 35 94 94 LEU LEU A . n A 1 36 PRO 36 95 95 PRO PRO A . n A 1 37 PRO 37 96 96 PRO PRO A . n A 1 38 GLY 38 97 97 GLY GLY A . n A 1 39 ILE 39 98 98 ILE ILE A . n A 1 40 ALA 40 99 99 ALA ALA A . n A 1 41 LYS 41 100 100 LYS LYS A . n A 1 42 ASN 42 101 101 ASN ASN A . n A 1 43 LEU 43 102 102 LEU LEU A . n A 1 44 ALA 44 103 103 ALA ALA A . n A 1 45 ARG 45 104 104 ARG ARG A . n A 1 46 GLY 46 105 105 GLY GLY A . n A 1 47 LYS 47 106 106 LYS LYS A . n A 1 48 PRO 48 107 107 PRO PRO A . n A 1 49 LEU 49 108 108 LEU LEU A . n A 1 50 PRO 50 109 109 PRO PRO A . n A 1 51 PRO 51 110 110 PRO PRO A . n A 1 52 GLY 52 111 111 GLY GLY A . n A 1 53 ILE 53 112 112 ILE ILE A . n A 1 54 ALA 54 113 113 ALA ALA A . n A 1 55 LYS 55 114 114 LYS LYS A . n A 1 56 LYS 56 115 115 LYS LYS A . n A 1 57 THR 57 116 116 THR THR A . n A 1 58 VAL 58 117 117 VAL VAL A . n A 1 59 PRO 59 118 118 PRO PRO A . n A 1 60 ALA 60 119 119 ALA ALA A . n A 1 61 SER 61 120 120 SER SER A . n A 1 62 MSE 62 121 121 MSE MSE A . n A 1 63 LEU 63 122 122 LEU LEU A . n A 1 64 GLY 64 123 123 GLY GLY A . n A 1 65 GLN 65 124 124 GLN GLN A . n A 1 66 LEU 66 125 125 LEU LEU A . n A 1 67 PRO 67 126 126 PRO PRO A . n A 1 68 TYR 68 127 127 TYR TYR A . n A 1 69 TYR 69 128 128 TYR TYR A . n A 1 70 PRO 70 129 129 PRO PRO A . n A 1 71 GLY 71 130 130 GLY GLY A . n A 1 72 TYR 72 131 131 TYR TYR A . n A 1 73 GLU 73 132 132 GLU GLU A . n A 1 74 TRP 74 133 133 TRP TRP A . n A 1 75 LYS 75 134 134 LYS LYS A . n A 1 76 ILE 76 135 135 ILE ILE A . n A 1 77 VAL 77 136 136 VAL VAL A . n A 1 78 GLY 78 137 137 GLY GLY A . n A 1 79 ASP 79 138 138 ASP ASP A . n A 1 80 ASN 80 139 139 ASN ASN A . n A 1 81 LEU 81 140 140 LEU LEU A . n A 1 82 VAL 82 141 141 VAL VAL A . n A 1 83 LEU 83 142 142 LEU LEU A . n A 1 84 ILE 84 143 143 ILE ILE A . n A 1 85 ALA 85 144 144 ALA ALA A . n A 1 86 LEU 86 145 145 LEU LEU A . n A 1 87 SER 87 146 146 SER SER A . n A 1 88 THR 88 147 147 THR THR A . n A 1 89 ALA 89 148 148 ALA ALA A . n A 1 90 VAL 90 149 149 VAL VAL A . n A 1 91 VAL 91 150 150 VAL VAL A . n A 1 92 THR 92 151 151 THR THR A . n A 1 93 ALA 93 152 152 ALA ALA A . n A 1 94 ILE 94 153 153 ILE ILE A . n A 1 95 ILE 95 154 154 ILE ILE A . n A 1 96 ASN 96 155 155 ASN ASN A . n A 1 97 GLY 97 156 156 GLY GLY A . n A 1 98 VAL 98 157 157 VAL VAL A . n A 1 99 PHE 99 158 158 PHE PHE A . n A 1 100 ASP 100 159 159 ASP ASP A . n A 1 101 LEU 101 160 160 LEU LEU A . n A 1 102 GLU 102 161 161 GLU GLU A . n B 1 1 HIS 1 60 ? ? ? B . n B 1 2 ARG 2 61 ? ? ? B . n B 1 3 LYS 3 62 ? ? ? B . n B 1 4 ASN 4 63 ? ? ? B . n B 1 5 GLY 5 64 64 GLY GLY B . n B 1 6 GLY 6 65 65 GLY GLY B . n B 1 7 LYS 7 66 66 LYS LYS B . n B 1 8 PRO 8 67 67 PRO PRO B . n B 1 9 ASP 9 68 68 ASP ASP B . n B 1 10 HIS 10 69 69 HIS HIS B . n B 1 11 VAL 11 70 70 VAL VAL B . n B 1 12 GLU 12 71 71 GLU GLU B . n B 1 13 SER 13 72 72 SER SER B . n B 1 14 ASP 14 73 73 ASP ASP B . n B 1 15 ILE 15 74 74 ILE ILE B . n B 1 16 SER 16 75 75 SER SER B . n B 1 17 TYR 17 76 76 TYR TYR B . n B 1 18 ALA 18 77 77 ALA ALA B . n B 1 19 VAL 19 78 78 VAL VAL B . n B 1 20 ALA 20 79 79 ALA ALA B . n B 1 21 ARG 21 80 80 ARG ARG B . n B 1 22 GLN 22 81 81 GLN GLN B . n B 1 23 LEU 23 82 82 LEU LEU B . n B 1 24 ALA 24 83 83 ALA ALA B . n B 1 25 VAL 25 84 84 VAL VAL B . n B 1 26 ASN 26 85 85 ASN ASN B . n B 1 27 LEU 27 86 86 LEU LEU B . n B 1 28 GLY 28 87 87 GLY GLY B . n B 1 29 LEU 29 88 88 LEU LEU B . n B 1 30 THR 30 89 89 THR THR B . n B 1 31 GLY 31 90 90 GLY GLY B . n B 1 32 TYR 32 91 91 TYR TYR B . n B 1 33 GLN 33 92 92 GLN GLN B . n B 1 34 SER 34 93 93 SER SER B . n B 1 35 LEU 35 94 94 LEU LEU B . n B 1 36 PRO 36 95 95 PRO PRO B . n B 1 37 PRO 37 96 96 PRO PRO B . n B 1 38 GLY 38 97 97 GLY GLY B . n B 1 39 ILE 39 98 98 ILE ILE B . n B 1 40 ALA 40 99 99 ALA ALA B . n B 1 41 LYS 41 100 100 LYS LYS B . n B 1 42 ASN 42 101 101 ASN ASN B . n B 1 43 LEU 43 102 102 LEU LEU B . n B 1 44 ALA 44 103 103 ALA ALA B . n B 1 45 ARG 45 104 104 ARG ARG B . n B 1 46 GLY 46 105 105 GLY GLY B . n B 1 47 LYS 47 106 106 LYS LYS B . n B 1 48 PRO 48 107 107 PRO PRO B . n B 1 49 LEU 49 108 108 LEU LEU B . n B 1 50 PRO 50 109 109 PRO PRO B . n B 1 51 PRO 51 110 110 PRO PRO B . n B 1 52 GLY 52 111 111 GLY GLY B . n B 1 53 ILE 53 112 112 ILE ILE B . n B 1 54 ALA 54 113 113 ALA ALA B . n B 1 55 LYS 55 114 114 LYS LYS B . n B 1 56 LYS 56 115 115 LYS LYS B . n B 1 57 THR 57 116 116 THR THR B . n B 1 58 VAL 58 117 117 VAL VAL B . n B 1 59 PRO 59 118 118 PRO PRO B . n B 1 60 ALA 60 119 119 ALA ALA B . n B 1 61 SER 61 120 120 SER SER B . n B 1 62 MSE 62 121 121 MSE MSE B . n B 1 63 LEU 63 122 122 LEU LEU B . n B 1 64 GLY 64 123 123 GLY GLY B . n B 1 65 GLN 65 124 124 GLN GLN B . n B 1 66 LEU 66 125 125 LEU LEU B . n B 1 67 PRO 67 126 126 PRO PRO B . n B 1 68 TYR 68 127 127 TYR TYR B . n B 1 69 TYR 69 128 128 TYR TYR B . n B 1 70 PRO 70 129 129 PRO PRO B . n B 1 71 GLY 71 130 130 GLY GLY B . n B 1 72 TYR 72 131 131 TYR TYR B . n B 1 73 GLU 73 132 132 GLU GLU B . n B 1 74 TRP 74 133 133 TRP TRP B . n B 1 75 LYS 75 134 134 LYS LYS B . n B 1 76 ILE 76 135 135 ILE ILE B . n B 1 77 VAL 77 136 136 VAL VAL B . n B 1 78 GLY 78 137 137 GLY GLY B . n B 1 79 ASP 79 138 138 ASP ASP B . n B 1 80 ASN 80 139 139 ASN ASN B . n B 1 81 LEU 81 140 140 LEU LEU B . n B 1 82 VAL 82 141 141 VAL VAL B . n B 1 83 LEU 83 142 142 LEU LEU B . n B 1 84 ILE 84 143 143 ILE ILE B . n B 1 85 ALA 85 144 144 ALA ALA B . n B 1 86 LEU 86 145 145 LEU LEU B . n B 1 87 SER 87 146 146 SER SER B . n B 1 88 THR 88 147 147 THR THR B . n B 1 89 ALA 89 148 148 ALA ALA B . n B 1 90 VAL 90 149 149 VAL VAL B . n B 1 91 VAL 91 150 150 VAL VAL B . n B 1 92 THR 92 151 151 THR THR B . n B 1 93 ALA 93 152 152 ALA ALA B . n B 1 94 ILE 94 153 153 ILE ILE B . n B 1 95 ILE 95 154 154 ILE ILE B . n B 1 96 ASN 96 155 155 ASN ASN B . n B 1 97 GLY 97 156 156 GLY GLY B . n B 1 98 VAL 98 157 157 VAL VAL B . n B 1 99 PHE 99 158 158 PHE PHE B . n B 1 100 ASP 100 159 159 ASP ASP B . n B 1 101 LEU 101 160 160 LEU LEU B . n B 1 102 GLU 102 161 ? ? ? B . n # loop_ _pdbx_SG_project.id _pdbx_SG_project.project_name _pdbx_SG_project.full_name_of_center _pdbx_SG_project.initial_of_center 1 PSI:Biology 'Midwest Center for Structural Genomics' MCSG 2 PSI:Biology 'Program for the Characterization of Secreted Effector Proteins' PCSEP # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 501 501 EDO EDO A . D 2 EDO 1 201 502 EDO EDO B . E 3 HOH 1 601 2 HOH HOH A . E 3 HOH 2 602 4 HOH HOH A . E 3 HOH 3 603 5 HOH HOH A . E 3 HOH 4 604 6 HOH HOH A . E 3 HOH 5 605 7 HOH HOH A . E 3 HOH 6 606 9 HOH HOH A . E 3 HOH 7 607 10 HOH HOH A . E 3 HOH 8 608 11 HOH HOH A . E 3 HOH 9 609 12 HOH HOH A . E 3 HOH 10 610 13 HOH HOH A . E 3 HOH 11 611 16 HOH HOH A . E 3 HOH 12 612 17 HOH HOH A . E 3 HOH 13 613 18 HOH HOH A . E 3 HOH 14 614 19 HOH HOH A . E 3 HOH 15 615 20 HOH HOH A . E 3 HOH 16 616 22 HOH HOH A . E 3 HOH 17 617 23 HOH HOH A . E 3 HOH 18 618 24 HOH HOH A . E 3 HOH 19 619 27 HOH HOH A . E 3 HOH 20 620 28 HOH HOH A . E 3 HOH 21 621 30 HOH HOH A . E 3 HOH 22 622 31 HOH HOH A . E 3 HOH 23 623 32 HOH HOH A . E 3 HOH 24 624 33 HOH HOH A . E 3 HOH 25 625 34 HOH HOH A . E 3 HOH 26 626 35 HOH HOH A . E 3 HOH 27 627 37 HOH HOH A . E 3 HOH 28 628 38 HOH HOH A . E 3 HOH 29 629 40 HOH HOH A . E 3 HOH 30 630 41 HOH HOH A . E 3 HOH 31 631 42 HOH HOH A . E 3 HOH 32 632 43 HOH HOH A . E 3 HOH 33 633 44 HOH HOH A . E 3 HOH 34 634 45 HOH HOH A . E 3 HOH 35 635 46 HOH HOH A . E 3 HOH 36 636 47 HOH HOH A . E 3 HOH 37 637 48 HOH HOH A . E 3 HOH 38 638 49 HOH HOH A . E 3 HOH 39 639 51 HOH HOH A . E 3 HOH 40 640 53 HOH HOH A . E 3 HOH 41 641 54 HOH HOH A . E 3 HOH 42 642 56 HOH HOH A . E 3 HOH 43 643 57 HOH HOH A . E 3 HOH 44 644 59 HOH HOH A . E 3 HOH 45 645 66 HOH HOH A . E 3 HOH 46 646 67 HOH HOH A . E 3 HOH 47 647 68 HOH HOH A . E 3 HOH 48 648 70 HOH HOH A . E 3 HOH 49 649 72 HOH HOH A . E 3 HOH 50 650 73 HOH HOH A . E 3 HOH 51 651 74 HOH HOH A . E 3 HOH 52 652 75 HOH HOH A . E 3 HOH 53 653 77 HOH HOH A . E 3 HOH 54 654 78 HOH HOH A . E 3 HOH 55 655 82 HOH HOH A . E 3 HOH 56 656 84 HOH HOH A . E 3 HOH 57 657 85 HOH HOH A . E 3 HOH 58 658 88 HOH HOH A . E 3 HOH 59 659 89 HOH HOH A . E 3 HOH 60 660 90 HOH HOH A . E 3 HOH 61 661 91 HOH HOH A . E 3 HOH 62 662 92 HOH HOH A . E 3 HOH 63 663 93 HOH HOH A . E 3 HOH 64 664 95 HOH HOH A . E 3 HOH 65 665 96 HOH HOH A . E 3 HOH 66 666 98 HOH HOH A . E 3 HOH 67 667 99 HOH HOH A . E 3 HOH 68 668 100 HOH HOH A . E 3 HOH 69 669 101 HOH HOH A . E 3 HOH 70 670 102 HOH HOH A . E 3 HOH 71 671 103 HOH HOH A . E 3 HOH 72 672 106 HOH HOH A . E 3 HOH 73 673 108 HOH HOH A . E 3 HOH 74 674 109 HOH HOH A . E 3 HOH 75 675 110 HOH HOH A . E 3 HOH 76 676 113 HOH HOH A . E 3 HOH 77 677 114 HOH HOH A . E 3 HOH 78 678 117 HOH HOH A . E 3 HOH 79 679 118 HOH HOH A . E 3 HOH 80 680 119 HOH HOH A . E 3 HOH 81 681 120 HOH HOH A . E 3 HOH 82 682 122 HOH HOH A . E 3 HOH 83 683 124 HOH HOH A . E 3 HOH 84 684 126 HOH HOH A . E 3 HOH 85 685 127 HOH HOH A . E 3 HOH 86 686 128 HOH HOH A . E 3 HOH 87 687 129 HOH HOH A . E 3 HOH 88 688 130 HOH HOH A . E 3 HOH 89 689 136 HOH HOH A . E 3 HOH 90 690 138 HOH HOH A . E 3 HOH 91 691 139 HOH HOH A . E 3 HOH 92 692 140 HOH HOH A . E 3 HOH 93 693 141 HOH HOH A . E 3 HOH 94 694 142 HOH HOH A . E 3 HOH 95 695 143 HOH HOH A . E 3 HOH 96 696 144 HOH HOH A . E 3 HOH 97 697 145 HOH HOH A . F 3 HOH 1 301 1 HOH HOH B . F 3 HOH 2 302 3 HOH HOH B . F 3 HOH 3 303 8 HOH HOH B . F 3 HOH 4 304 14 HOH HOH B . F 3 HOH 5 305 15 HOH HOH B . F 3 HOH 6 306 21 HOH HOH B . F 3 HOH 7 307 25 HOH HOH B . F 3 HOH 8 308 26 HOH HOH B . F 3 HOH 9 309 29 HOH HOH B . F 3 HOH 10 310 36 HOH HOH B . F 3 HOH 11 311 39 HOH HOH B . F 3 HOH 12 312 50 HOH HOH B . F 3 HOH 13 313 52 HOH HOH B . F 3 HOH 14 314 55 HOH HOH B . F 3 HOH 15 315 58 HOH HOH B . F 3 HOH 16 316 60 HOH HOH B . F 3 HOH 17 317 61 HOH HOH B . F 3 HOH 18 318 62 HOH HOH B . F 3 HOH 19 319 63 HOH HOH B . F 3 HOH 20 320 64 HOH HOH B . F 3 HOH 21 321 65 HOH HOH B . F 3 HOH 22 322 69 HOH HOH B . F 3 HOH 23 323 71 HOH HOH B . F 3 HOH 24 324 76 HOH HOH B . F 3 HOH 25 325 79 HOH HOH B . F 3 HOH 26 326 80 HOH HOH B . F 3 HOH 27 327 81 HOH HOH B . F 3 HOH 28 328 83 HOH HOH B . F 3 HOH 29 329 86 HOH HOH B . F 3 HOH 30 330 87 HOH HOH B . F 3 HOH 31 331 94 HOH HOH B . F 3 HOH 32 332 97 HOH HOH B . F 3 HOH 33 333 104 HOH HOH B . F 3 HOH 34 334 105 HOH HOH B . F 3 HOH 35 335 107 HOH HOH B . F 3 HOH 36 336 111 HOH HOH B . F 3 HOH 37 337 112 HOH HOH B . F 3 HOH 38 338 115 HOH HOH B . F 3 HOH 39 339 116 HOH HOH B . F 3 HOH 40 340 121 HOH HOH B . F 3 HOH 41 341 123 HOH HOH B . F 3 HOH 42 342 125 HOH HOH B . F 3 HOH 43 343 131 HOH HOH B . F 3 HOH 44 344 132 HOH HOH B . F 3 HOH 45 345 133 HOH HOH B . F 3 HOH 46 346 134 HOH HOH B . F 3 HOH 47 347 135 HOH HOH B . F 3 HOH 48 348 137 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 62 A MSE 121 ? MET SELENOMETHIONINE 2 B MSE 62 B MSE 121 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2500 ? 1 MORE -8 ? 1 'SSA (A^2)' 10770 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-23 2 'Structure model' 1 1 2017-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 17.3206 -5.2668 31.3267 0.0646 0.0383 0.0818 -0.0113 -0.0015 0.0272 1.4698 0.7012 1.4860 -0.7633 1.1128 -0.1379 -0.0507 -0.0609 0.1116 0.1005 0.1800 -0.1021 -0.1061 -0.2249 0.0478 'X-RAY DIFFRACTION' 2 ? refined 3.8180 -15.0293 13.5730 0.0714 0.0475 0.0876 0.0008 -0.0079 0.0103 0.1367 0.8682 0.6513 -0.2170 0.0547 0.2075 0.0453 -0.0575 0.0122 -0.0451 -0.0268 0.0621 -0.1463 -0.0071 -0.0846 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 60 A 161 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 64 B 160 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC 5.6.0117 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 6 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 MLPHARE . ? ? ? ? phasing ? ? ? 10 DM . ? ? ? ? phasing ? ? ? 11 ARP/wARP . ? ? ? ? 'model building' ? ? ? 12 HKL-3000 . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 604 ? ? O B HOH 339 ? ? 2.07 2 1 OG A SER 72 ? A OE1 B GLU 71 ? ? 2.13 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 HIS _pdbx_validate_rmsd_bond.auth_seq_id_1 69 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 HIS _pdbx_validate_rmsd_bond.auth_seq_id_2 69 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.411 _pdbx_validate_rmsd_bond.bond_target_value 1.354 _pdbx_validate_rmsd_bond.bond_deviation 0.057 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.009 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 69 ? ? -150.30 69.71 2 1 SER A 146 ? ? 76.86 -62.32 3 1 ALA B 148 ? ? 54.15 15.07 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B HIS 60 ? B HIS 1 2 1 Y 1 B ARG 61 ? B ARG 2 3 1 Y 1 B LYS 62 ? B LYS 3 4 1 Y 1 B ASN 63 ? B ASN 4 5 1 Y 1 B GLU 161 ? B GLU 102 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #