HEADER METAL BINDING PROTEIN 07-MAY-12 4F28 TITLE THE CRYSTAL STRUCTURE OF A HUMAN MITONEET MUTANT WITH MET 62 REPLACED TITLE 2 BY A GLY COMPND MOL_ID: 1; COMPND 2 MOLECULE: CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: WATER-SOLUBLE DOMAIN, UNP RESIDUES 33-108; COMPND 5 SYNONYM: MITONEET; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: C10ORF70, CISD1, MDS029, ZCD1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B21-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET28-A(+) KEYWDS 2FE-2S PROTEINS, MEMBRANE, SIGNAL-ANCHOR, TRANSMEMBRANE METAL BINDING KEYWDS 2 PROTEIN, PROTEIN FRUSTRATION, MITOCHONDRIAL OUTER MEMBRANE, METAL KEYWDS 3 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.L.BAXTER,J.A.ZURIS,C.WANG,H.L.AXELROD,A.E.COHEN,M.L.PADDOCK, AUTHOR 2 R.NECHUSHTAI,J.N.ONUCHIC,P.A.JENNINGS REVDAT 3 28-FEB-24 4F28 1 REMARK SEQADV LINK REVDAT 2 30-JAN-13 4F28 1 JRNL REVDAT 1 26-DEC-12 4F28 0 JRNL AUTH E.L.BAXTER,J.A.ZURIS,C.WANG,P.L.VO,H.L.AXELROD,A.E.COHEN, JRNL AUTH 2 M.L.PADDOCK,R.NECHUSHTAI,J.N.ONUCHIC,P.A.JENNINGS JRNL TITL ALLOSTERIC CONTROL IN A METALLOPROTEIN DRAMATICALLY ALTERS JRNL TITL 2 FUNCTION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 948 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23271805 JRNL DOI 10.1073/PNAS.1208286110 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 20401 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1044 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.63 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2690 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2328 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2554 REMARK 3 BIN R VALUE (WORKING SET) : 0.2321 REMARK 3 BIN FREE R VALUE : 0.2450 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.06 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 136 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 978 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 84 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.71820 REMARK 3 B22 (A**2) : -7.36910 REMARK 3 B33 (A**2) : 8.08730 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1040 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1405 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 487 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 24 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 157 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1040 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 134 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1193 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.74 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.32 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|42 - 104} REMARK 3 ORIGIN FOR THE GROUP (A): 6.2837 -3.0094 9.1700 REMARK 3 T TENSOR REMARK 3 T11: 0.2070 T22: -0.1055 REMARK 3 T33: -0.2376 T12: -0.0489 REMARK 3 T13: 0.0186 T23: -0.0155 REMARK 3 L TENSOR REMARK 3 L11: 1.9830 L22: 1.8392 REMARK 3 L33: 8.3155 L12: -0.5969 REMARK 3 L13: 1.6755 L23: -1.1825 REMARK 3 S TENSOR REMARK 3 S11: -0.0843 S12: -0.0929 S13: -0.1100 REMARK 3 S21: -0.1189 S22: 0.0348 S23: 0.0336 REMARK 3 S31: 0.5442 S32: -0.5442 S33: 0.0495 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {B|43 - 106} REMARK 3 ORIGIN FOR THE GROUP (A): 12.1212 5.2430 5.9129 REMARK 3 T TENSOR REMARK 3 T11: 0.1680 T22: -0.1326 REMARK 3 T33: -0.1616 T12: 0.0305 REMARK 3 T13: -0.0348 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 1.1692 L22: 2.2263 REMARK 3 L33: 8.3155 L12: -1.4972 REMARK 3 L13: 1.9082 L23: -2.0125 REMARK 3 S TENSOR REMARK 3 S11: -0.1537 S12: 0.1378 S13: 0.2341 REMARK 3 S21: 0.1457 S22: -0.2368 S23: -0.1968 REMARK 3 S31: -0.4960 S32: 0.2091 S33: 0.3905 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. ATOM RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 2. NCS RESTRAINTS WERE APPLIED USING BUSTER' REMARK 3 S LSSR RESTRAINT REPRESENTATION (-AUTONCS). DIFFERENCE ELECTRON REMARK 3 DENSITY, MOST LIKELY CORRESPONDING TO PROTEIN RESIDUES AT THE N- REMARK 3 TERMINAL END OF CHAINS A OR B COULD NOT BE DEFINITIVELY ASSIGNED REMARK 3 AND WERE NOT MODELED REMARK 4 REMARK 4 4F28 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072362. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : RH COATED FLAT MIRROR, TOROIDAL REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20457 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 33.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.2600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.99100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.66500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.55500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.55500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.66500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 33 REMARK 465 PHE A 34 REMARK 465 TYR A 35 REMARK 465 VAL A 36 REMARK 465 LYS A 37 REMARK 465 ASP A 38 REMARK 465 HIS A 39 REMARK 465 ARG A 40 REMARK 465 ASN A 41 REMARK 465 LYS A 105 REMARK 465 LYS A 106 REMARK 465 GLU A 107 REMARK 465 THR A 108 REMARK 465 ARG B 33 REMARK 465 PHE B 34 REMARK 465 TYR B 35 REMARK 465 VAL B 36 REMARK 465 LYS B 37 REMARK 465 ASP B 38 REMARK 465 HIS B 39 REMARK 465 ARG B 40 REMARK 465 ASN B 41 REMARK 465 LYS B 42 REMARK 465 GLU B 107 REMARK 465 THR B 108 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 42 CB CG CD CE NZ REMARK 470 GLU A 63 CG CD OE1 OE2 REMARK 470 ASP A 67 CG OD1 OD2 REMARK 470 LYS A 89 CE NZ REMARK 470 GLU A 92 CG CD OE1 OE2 REMARK 470 GLU B 63 CG CD OE1 OE2 REMARK 470 ASP B 64 CG OD1 OD2 REMARK 470 ASP B 67 CG OD1 OD2 REMARK 470 LYS B 105 CE NZ REMARK 470 LYS B 106 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 50 57.91 33.68 REMARK 500 GLN B 50 57.33 36.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 201 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 72 SG REMARK 620 2 FES A 201 S1 110.0 REMARK 620 3 FES A 201 S2 113.8 104.4 REMARK 620 4 CYS A 74 SG 102.1 112.4 114.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 201 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 83 SG REMARK 620 2 FES A 201 S1 108.7 REMARK 620 3 FES A 201 S2 126.4 103.6 REMARK 620 4 HIS A 87 ND1 99.3 116.1 103.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 201 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 72 SG REMARK 620 2 FES B 201 S1 111.0 REMARK 620 3 FES B 201 S2 115.9 105.9 REMARK 620 4 CYS B 74 SG 100.7 106.4 116.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 201 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 83 SG REMARK 620 2 FES B 201 S1 110.7 REMARK 620 3 FES B 201 S2 123.9 103.4 REMARK 620 4 HIS B 87 ND1 96.3 117.6 105.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LPQ RELATED DB: PDB REMARK 900 HUMAN MITONEET WITH 2FE-2S COORDINATING LIGAND HIS 87 REPLACE WITH REMARK 900 CYS REMARK 900 RELATED ID: 3EW0 RELATED DB: PDB REMARK 900 THE NOVEL 2FE-2S OUTER MITOCHONDRIAL PROTEIN MITONEET DISPLAYS REMARK 900 CONFORMATIONAL FLEXIBILITY IN ITS N-TERMINAL CYTOPLASMIC TETHERING REMARK 900 DOMAIN REMARK 900 RELATED ID: 2QH7 RELATED DB: PDB REMARK 900 MITONEET IS A UNIQUELY FOLDED 2FE-2S OUTER MITOCHONDRIAL MEMBRANE REMARK 900 PROTEIN STABILIZED BY PIOGLITAZONE REMARK 900 RELATED ID: 4F1E RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH D67G MUTATION REMARK 900 RELATED ID: 4F2C RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH G66A, D67A MUTATIONS REMARK 900 RELATED ID: 4EZF RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH D67A, K68A MUTATIONS DBREF 4F28 A 33 108 UNP Q9NZ45 CISD1_HUMAN 33 108 DBREF 4F28 B 33 108 UNP Q9NZ45 CISD1_HUMAN 33 108 SEQADV 4F28 GLY A 62 UNP Q9NZ45 MET 62 ENGINEERED MUTATION SEQADV 4F28 GLY B 62 UNP Q9NZ45 MET 62 ENGINEERED MUTATION SEQRES 1 A 76 ARG PHE TYR VAL LYS ASP HIS ARG ASN LYS ALA MET ILE SEQRES 2 A 76 ASN LEU HIS ILE GLN LYS ASP ASN PRO LYS ILE VAL HIS SEQRES 3 A 76 ALA PHE ASP GLY GLU ASP LEU GLY ASP LYS ALA VAL TYR SEQRES 4 A 76 CYS ARG CYS TRP ARG SER LYS LYS PHE PRO PHE CYS ASP SEQRES 5 A 76 GLY ALA HIS THR LYS HIS ASN GLU GLU THR GLY ASP ASN SEQRES 6 A 76 VAL GLY PRO LEU ILE ILE LYS LYS LYS GLU THR SEQRES 1 B 76 ARG PHE TYR VAL LYS ASP HIS ARG ASN LYS ALA MET ILE SEQRES 2 B 76 ASN LEU HIS ILE GLN LYS ASP ASN PRO LYS ILE VAL HIS SEQRES 3 B 76 ALA PHE ASP GLY GLU ASP LEU GLY ASP LYS ALA VAL TYR SEQRES 4 B 76 CYS ARG CYS TRP ARG SER LYS LYS PHE PRO PHE CYS ASP SEQRES 5 B 76 GLY ALA HIS THR LYS HIS ASN GLU GLU THR GLY ASP ASN SEQRES 6 B 76 VAL GLY PRO LEU ILE ILE LYS LYS LYS GLU THR HET FES A 201 4 HET FES B 201 4 HETNAM FES FE2/S2 (INORGANIC) CLUSTER FORMUL 3 FES 2(FE2 S2) FORMUL 5 HOH *84(H2 O) HELIX 1 1 GLU A 63 LEU A 65 5 3 HELIX 2 2 GLY A 85 GLY A 95 1 11 HELIX 3 3 GLU B 63 LEU B 65 5 3 HELIX 4 4 GLY B 85 GLY B 95 1 11 SHEET 1 A 3 ILE A 56 ASP A 61 0 SHEET 2 A 3 VAL B 98 LYS B 104 1 O ILE B 102 N HIS A 58 SHEET 3 A 3 LYS B 68 TYR B 71 -1 N TYR B 71 O LEU B 101 SHEET 1 B 3 ALA A 69 TYR A 71 0 SHEET 2 B 3 VAL A 98 LYS A 104 -1 O LEU A 101 N TYR A 71 SHEET 3 B 3 ILE B 56 ASP B 61 1 O HIS B 58 N ILE A 102 LINK SG CYS A 72 FE1 FES A 201 1555 1555 2.36 LINK SG CYS A 74 FE1 FES A 201 1555 1555 2.24 LINK SG CYS A 83 FE2 FES A 201 1555 1555 2.20 LINK ND1 HIS A 87 FE2 FES A 201 1555 1555 2.13 LINK SG CYS B 72 FE1 FES B 201 1555 1555 2.33 LINK SG CYS B 74 FE1 FES B 201 1555 1555 2.25 LINK SG CYS B 83 FE2 FES B 201 1555 1555 2.31 LINK ND1 HIS B 87 FE2 FES B 201 1555 1555 2.12 CISPEP 1 PHE A 80 PRO A 81 0 12.75 CISPEP 2 PHE B 80 PRO B 81 0 12.01 SITE 1 AC1 9 CYS A 72 ARG A 73 CYS A 74 SER A 77 SITE 2 AC1 9 CYS A 83 ASP A 84 GLY A 85 ALA A 86 SITE 3 AC1 9 HIS A 87 SITE 1 AC2 8 CYS B 72 ARG B 73 CYS B 74 SER B 77 SITE 2 AC2 8 CYS B 83 ASP B 84 ALA B 86 HIS B 87 CRYST1 41.330 56.600 59.110 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024195 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017668 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016918 0.00000