HEADER TRANSPORT PROTEIN 13-MAY-12 4F5V TITLE CRYSTAL STRUCTURE OF LEPORINE SERUM ALBUMIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERUM ALBUMIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 25-608, MATURE FORM OF ALBUMIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986; SOURCE 5 STRAIN: THORBECKE KEYWDS LEPORINE SERUM ALBUMIN, HELICAL STRUCTURE, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.BUJACZ,G.BUJACZ REVDAT 2 13-SEP-23 4F5V 1 REMARK REVDAT 1 03-OCT-12 4F5V 0 JRNL AUTH A.BUJACZ JRNL TITL STRUCTURES OF BOVINE, EQUINE AND LEPORINE SERUM ALBUMIN. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 68 1278 2012 JRNL REFN ISSN 0907-4449 JRNL PMID 22993082 JRNL DOI 10.1107/S0907444912027047 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 25667 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1379 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.27 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1182 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.2510 REMARK 3 BIN FREE R VALUE SET COUNT : 57 REMARK 3 BIN FREE R VALUE : 0.3160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4631 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 193 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.71000 REMARK 3 B22 (A**2) : 1.35000 REMARK 3 B33 (A**2) : -2.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.409 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.266 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.117 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.296 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4811 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6507 ; 1.929 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 591 ; 7.047 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 223 ;36.435 ;24.798 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 855 ;18.193 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;15.819 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 712 ; 0.136 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3606 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2947 ; 0.858 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4753 ; 1.489 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1864 ; 2.650 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1750 ; 3.933 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 106 REMARK 3 ORIGIN FOR THE GROUP (A): 39.1751 19.5789 87.0369 REMARK 3 T TENSOR REMARK 3 T11: 0.1576 T22: 0.2187 REMARK 3 T33: 0.2893 T12: 0.0024 REMARK 3 T13: 0.0140 T23: -0.0630 REMARK 3 L TENSOR REMARK 3 L11: 3.3855 L22: 3.6123 REMARK 3 L33: 4.2892 L12: 2.2406 REMARK 3 L13: -0.2882 L23: -1.9309 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: -0.2377 S13: 0.3198 REMARK 3 S21: 0.1796 S22: -0.0269 S23: 0.7938 REMARK 3 S31: -0.2558 S32: -0.6090 S33: 0.0188 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 107 A 147 REMARK 3 ORIGIN FOR THE GROUP (A): 57.6793 29.8781 83.5077 REMARK 3 T TENSOR REMARK 3 T11: 0.2923 T22: 0.1627 REMARK 3 T33: 0.2813 T12: -0.0961 REMARK 3 T13: -0.0705 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 6.0347 L22: 1.1669 REMARK 3 L33: 4.9435 L12: 0.6430 REMARK 3 L13: 4.4308 L23: 1.8015 REMARK 3 S TENSOR REMARK 3 S11: -0.2557 S12: 0.2394 S13: 0.5711 REMARK 3 S21: -0.1580 S22: 0.2574 S23: -0.3551 REMARK 3 S31: -0.4688 S32: 0.5252 S33: -0.0017 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 148 A 198 REMARK 3 ORIGIN FOR THE GROUP (A): 62.6095 22.4110 76.7279 REMARK 3 T TENSOR REMARK 3 T11: 0.1340 T22: 0.3115 REMARK 3 T33: 0.2910 T12: -0.0626 REMARK 3 T13: -0.0097 T23: -0.0778 REMARK 3 L TENSOR REMARK 3 L11: 4.9659 L22: 2.1463 REMARK 3 L33: 7.2273 L12: 0.2519 REMARK 3 L13: 5.1662 L23: 0.9160 REMARK 3 S TENSOR REMARK 3 S11: -0.3454 S12: 0.5158 S13: -0.0902 REMARK 3 S21: -0.0040 S22: 0.4409 S23: -0.7459 REMARK 3 S31: -0.5236 S32: 1.1953 S33: -0.0955 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 199 A 250 REMARK 3 ORIGIN FOR THE GROUP (A): 47.5673 8.2631 64.2013 REMARK 3 T TENSOR REMARK 3 T11: 0.0720 T22: 0.0639 REMARK 3 T33: 0.1311 T12: -0.0228 REMARK 3 T13: -0.0362 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 1.8994 L22: 1.5619 REMARK 3 L33: 3.3439 L12: -0.6020 REMARK 3 L13: -0.2745 L23: 0.5674 REMARK 3 S TENSOR REMARK 3 S11: 0.0713 S12: 0.2439 S13: -0.4441 REMARK 3 S21: -0.0616 S22: 0.0534 S23: 0.0981 REMARK 3 S31: 0.1569 S32: -0.0249 S33: -0.1246 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 251 A 295 REMARK 3 ORIGIN FOR THE GROUP (A): 57.9741 3.4717 73.1720 REMARK 3 T TENSOR REMARK 3 T11: 0.1522 T22: 0.1642 REMARK 3 T33: 0.2140 T12: 0.0178 REMARK 3 T13: -0.0558 T23: -0.0403 REMARK 3 L TENSOR REMARK 3 L11: 3.7908 L22: 1.4042 REMARK 3 L33: 2.6105 L12: -1.0707 REMARK 3 L13: -0.1111 L23: -0.4173 REMARK 3 S TENSOR REMARK 3 S11: -0.0052 S12: -0.0303 S13: -0.3627 REMARK 3 S21: 0.0130 S22: 0.0490 S23: -0.2300 REMARK 3 S31: 0.4074 S32: 0.4879 S33: -0.0437 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 296 A 336 REMARK 3 ORIGIN FOR THE GROUP (A): 48.6708 -1.7325 47.5763 REMARK 3 T TENSOR REMARK 3 T11: 0.1752 T22: 0.1770 REMARK 3 T33: 0.2811 T12: 0.0708 REMARK 3 T13: -0.0208 T23: -0.1802 REMARK 3 L TENSOR REMARK 3 L11: 2.0391 L22: 2.5823 REMARK 3 L33: 2.5220 L12: -0.1566 REMARK 3 L13: 0.6833 L23: -0.8293 REMARK 3 S TENSOR REMARK 3 S11: 0.2124 S12: 0.1933 S13: -0.5175 REMARK 3 S21: -0.1497 S22: 0.0205 S23: -0.0807 REMARK 3 S31: 0.4391 S32: 0.3137 S33: -0.2329 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 337 A 366 REMARK 3 ORIGIN FOR THE GROUP (A): 47.2320 8.0382 44.1381 REMARK 3 T TENSOR REMARK 3 T11: 0.1586 T22: 0.2663 REMARK 3 T33: 0.1318 T12: 0.0134 REMARK 3 T13: 0.0525 T23: -0.1353 REMARK 3 L TENSOR REMARK 3 L11: 2.4997 L22: 2.8282 REMARK 3 L33: 7.7487 L12: 1.8593 REMARK 3 L13: 3.9080 L23: 1.5065 REMARK 3 S TENSOR REMARK 3 S11: -0.1487 S12: 0.3880 S13: -0.0694 REMARK 3 S21: -0.2886 S22: 0.2776 S23: 0.0301 REMARK 3 S31: -0.2208 S32: 0.4281 S33: -0.1289 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 367 A 398 REMARK 3 ORIGIN FOR THE GROUP (A): 58.1350 18.1903 42.5554 REMARK 3 T TENSOR REMARK 3 T11: 0.2569 T22: 0.4637 REMARK 3 T33: 0.1904 T12: 0.0060 REMARK 3 T13: 0.0998 T23: -0.1244 REMARK 3 L TENSOR REMARK 3 L11: 7.0918 L22: 13.7311 REMARK 3 L33: 3.9870 L12: 9.7969 REMARK 3 L13: 5.3008 L23: 7.3498 REMARK 3 S TENSOR REMARK 3 S11: -0.4184 S12: 0.6918 S13: -0.3024 REMARK 3 S21: -0.6313 S22: 0.6679 S23: -0.3833 REMARK 3 S31: -0.2635 S32: 0.4721 S33: -0.2495 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 399 A 417 REMARK 3 ORIGIN FOR THE GROUP (A): 57.0492 38.0617 53.3948 REMARK 3 T TENSOR REMARK 3 T11: 0.1056 T22: 0.0150 REMARK 3 T33: 0.0431 T12: 0.0008 REMARK 3 T13: 0.0599 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 22.2783 L22: 5.2135 REMARK 3 L33: 2.0638 L12: -2.7680 REMARK 3 L13: 5.8817 L23: -0.8013 REMARK 3 S TENSOR REMARK 3 S11: -0.1587 S12: -0.2133 S13: -0.0262 REMARK 3 S21: 0.0104 S22: 0.2703 S23: -0.2100 REMARK 3 S31: -0.2318 S32: -0.0482 S33: -0.1115 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 418 A 468 REMARK 3 ORIGIN FOR THE GROUP (A): 55.7723 27.5681 58.5282 REMARK 3 T TENSOR REMARK 3 T11: 0.0707 T22: 0.0649 REMARK 3 T33: 0.0979 T12: -0.0565 REMARK 3 T13: -0.0283 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 4.3650 L22: 5.1031 REMARK 3 L33: 3.6928 L12: -1.8974 REMARK 3 L13: -0.6076 L23: 0.0221 REMARK 3 S TENSOR REMARK 3 S11: 0.2449 S12: -0.1002 S13: -0.3175 REMARK 3 S21: -0.0021 S22: 0.0493 S23: -0.2670 REMARK 3 S31: 0.0006 S32: 0.1918 S33: -0.2942 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 469 A 497 REMARK 3 ORIGIN FOR THE GROUP (A): 44.7907 30.5411 49.7829 REMARK 3 T TENSOR REMARK 3 T11: 0.1099 T22: 0.1489 REMARK 3 T33: 0.0332 T12: -0.0031 REMARK 3 T13: -0.0305 T23: 0.0349 REMARK 3 L TENSOR REMARK 3 L11: 3.9955 L22: 5.8038 REMARK 3 L33: 2.7745 L12: -1.6936 REMARK 3 L13: 0.0457 L23: 0.4295 REMARK 3 S TENSOR REMARK 3 S11: -0.0185 S12: 0.5205 S13: 0.0496 REMARK 3 S21: -0.5635 S22: 0.0355 S23: 0.3438 REMARK 3 S31: 0.0183 S32: -0.2572 S33: -0.0170 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 498 A 537 REMARK 3 ORIGIN FOR THE GROUP (A): 55.8666 49.3428 62.8014 REMARK 3 T TENSOR REMARK 3 T11: 0.4475 T22: 0.1980 REMARK 3 T33: 0.2945 T12: 0.0269 REMARK 3 T13: 0.0834 T23: -0.1077 REMARK 3 L TENSOR REMARK 3 L11: 8.6503 L22: 3.2683 REMARK 3 L33: 13.0659 L12: -1.6440 REMARK 3 L13: 6.1694 L23: -1.6186 REMARK 3 S TENSOR REMARK 3 S11: -0.6264 S12: -1.0354 S13: 1.0063 REMARK 3 S21: 0.8202 S22: 0.3099 S23: -0.0849 REMARK 3 S31: -1.7001 S32: -0.4887 S33: 0.3165 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 538 A 583 REMARK 3 ORIGIN FOR THE GROUP (A): 61.3915 57.0109 60.3757 REMARK 3 T TENSOR REMARK 3 T11: 0.6693 T22: 0.4130 REMARK 3 T33: 0.5402 T12: -0.0436 REMARK 3 T13: 0.0616 T23: -0.0701 REMARK 3 L TENSOR REMARK 3 L11: 2.8115 L22: 3.8761 REMARK 3 L33: 10.8374 L12: 0.0819 REMARK 3 L13: 1.6719 L23: 4.0588 REMARK 3 S TENSOR REMARK 3 S11: -0.2556 S12: -0.7789 S13: 0.7933 REMARK 3 S21: 0.4444 S22: -0.0439 S23: -0.2782 REMARK 3 S31: -1.0504 S32: -0.0875 S33: 0.2995 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 1.00 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4F5V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072493. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9400 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR SI REMARK 200 -111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27095 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 63.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.49900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.720 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4F5S, 1AO6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2 M AMMONIUM ACETATE, REMARK 280 0.1 M TRIS PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.10100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.11150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.82200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.11150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.10100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.82200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 59 157.61 -45.26 REMARK 500 ASN A 61 -2.49 79.34 REMARK 500 PRO A 78 -9.68 -46.29 REMARK 500 ARG A 81 145.40 -33.28 REMARK 500 ASP A 82 62.32 -110.84 REMARK 500 ASP A 111 95.16 -65.71 REMARK 500 PHE A 115 86.95 -46.07 REMARK 500 TYR A 150 109.70 -51.20 REMARK 500 ASP A 173 69.44 -152.46 REMARK 500 ILE A 271 -62.41 -120.28 REMARK 500 HIS A 274 -9.64 -56.87 REMARK 500 GLU A 277 -73.44 -38.19 REMARK 500 GLU A 277 -73.10 -38.40 REMARK 500 VAL A 310 -48.62 -130.17 REMARK 500 LYS A 313 -38.88 -35.73 REMARK 500 ASP A 314 33.28 -94.00 REMARK 500 ALA A 322 71.81 -153.65 REMARK 500 GLU A 442 -37.49 -39.49 REMARK 500 ALA A 504 96.87 -38.23 REMARK 500 PHE A 507 42.76 -104.41 REMARK 500 THR A 508 53.96 -115.96 REMARK 500 PHE A 509 151.70 -46.29 REMARK 500 HIS A 510 109.03 -55.27 REMARK 500 ILE A 513 -46.35 -29.72 REMARK 500 ASP A 563 47.20 72.90 REMARK 500 ALA A 566 -70.61 -55.95 REMARK 500 CYS A 567 4.22 -69.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 605 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4F5S RELATED DB: PDB REMARK 900 RELATED ID: 4F5T RELATED DB: PDB REMARK 900 RELATED ID: 4F5U RELATED DB: PDB DBREF 4F5V A 1 584 UNP G1U9S2 G1U9S2_RABIT 25 608 SEQRES 1 A 584 GLU ALA HIS LYS SER GLU ILE ALA HIS ARG PHE ASN ASP SEQRES 2 A 584 VAL GLY GLU GLU HIS PHE ILE GLY LEU VAL LEU ILE THR SEQRES 3 A 584 PHE SER GLN TYR LEU GLN LYS CYS PRO TYR GLU GLU HIS SEQRES 4 A 584 ALA LYS LEU VAL LYS GLU VAL THR ASP LEU ALA LYS ALA SEQRES 5 A 584 CYS VAL ALA ASP GLU SER ALA ALA ASN CYS ASP LYS SER SEQRES 6 A 584 LEU HIS ASP ILE PHE GLY ASP LYS ILE CYS ALA LEU PRO SEQRES 7 A 584 SER LEU ARG ASP THR TYR GLY ASP VAL ALA ASP CYS CYS SEQRES 8 A 584 GLU LYS LYS GLU PRO GLU ARG ASN GLU CYS PHE LEU HIS SEQRES 9 A 584 HIS LYS ASP ASP LYS PRO ASP LEU PRO PRO PHE ALA ARG SEQRES 10 A 584 PRO GLU ALA ASP VAL LEU CYS LYS ALA PHE HIS ASP ASP SEQRES 11 A 584 GLU LYS ALA PHE PHE GLY HIS TYR LEU TYR GLU VAL ALA SEQRES 12 A 584 ARG ARG HIS PRO TYR PHE TYR ALA PRO GLU LEU LEU TYR SEQRES 13 A 584 TYR ALA GLN LYS TYR LYS ALA ILE LEU THR GLU CYS CYS SEQRES 14 A 584 GLU ALA ALA ASP LYS GLY ALA CYS LEU THR PRO LYS LEU SEQRES 15 A 584 ASP ALA LEU LYS GLU LYS ALA LEU ILE SER ALA ALA GLN SEQRES 16 A 584 GLU ARG LEU ARG CYS ALA SER ILE GLN LYS PHE GLY ASP SEQRES 17 A 584 ARG ALA TYR LYS ALA TRP ALA LEU VAL ARG LEU SER GLN SEQRES 18 A 584 ARG PHE PRO LYS ALA ASP PHE THR ASP ILE SER LYS ILE SEQRES 19 A 584 VAL THR ASP LEU THR LYS VAL HIS LYS GLU CYS CYS HIS SEQRES 20 A 584 GLY ASP LEU LEU GLU CYS ALA ASP ASP ARG ALA ASP LEU SEQRES 21 A 584 ALA LYS TYR MET CYS GLU HIS GLN GLU THR ILE SER SER SEQRES 22 A 584 HIS LEU LYS GLU CYS CYS ASP LYS PRO ILE LEU GLU LYS SEQRES 23 A 584 ALA HIS CYS ILE TYR GLY LEU HIS ASN ASP GLU THR PRO SEQRES 24 A 584 ALA GLY LEU PRO ALA VAL ALA GLU GLU PHE VAL GLU ASP SEQRES 25 A 584 LYS ASP VAL CYS LYS ASN TYR GLU GLU ALA LYS ASP LEU SEQRES 26 A 584 PHE LEU GLY LYS PHE LEU TYR GLU TYR SER ARG ARG HIS SEQRES 27 A 584 PRO ASP TYR SER VAL VAL LEU LEU LEU ARG LEU GLY LYS SEQRES 28 A 584 ALA TYR GLU ALA THR LEU LYS LYS CYS CYS ALA THR ASP SEQRES 29 A 584 ASP PRO HIS ALA CYS TYR ALA LYS VAL LEU ASP GLU PHE SEQRES 30 A 584 GLN PRO LEU VAL ASP GLU PRO LYS ASN LEU VAL LYS GLN SEQRES 31 A 584 ASN CYS GLU LEU TYR GLU GLN LEU GLY ASP TYR ASN PHE SEQRES 32 A 584 GLN ASN ALA LEU LEU VAL ARG TYR THR LYS LYS VAL PRO SEQRES 33 A 584 GLN VAL SER THR PRO THR LEU VAL GLU ILE SER ARG SER SEQRES 34 A 584 LEU GLY LYS VAL GLY SER LYS CYS CYS LYS HIS PRO GLU SEQRES 35 A 584 ALA GLU ARG LEU PRO CYS VAL GLU ASP TYR LEU SER VAL SEQRES 36 A 584 VAL LEU ASN ARG LEU CYS VAL LEU HIS GLU LYS THR PRO SEQRES 37 A 584 VAL SER GLU LYS VAL THR LYS CYS CYS SER GLU SER LEU SEQRES 38 A 584 VAL ASP ARG ARG PRO CYS PHE SER ALA LEU GLY PRO ASP SEQRES 39 A 584 GLU THR TYR VAL PRO LYS GLU PHE ASN ALA GLU THR PHE SEQRES 40 A 584 THR PHE HIS ALA ASP ILE CYS THR LEU PRO GLU THR GLU SEQRES 41 A 584 ARG LYS ILE LYS LYS GLN THR ALA LEU VAL GLU LEU VAL SEQRES 42 A 584 LYS HIS LYS PRO HIS ALA THR ASN ASP GLN LEU LYS THR SEQRES 43 A 584 VAL VAL GLY GLU PHE THR ALA LEU LEU ASP LYS CYS CYS SEQRES 44 A 584 SER ALA GLU ASP LYS GLU ALA CYS PHE ALA VAL GLU GLY SEQRES 45 A 584 PRO LYS LEU VAL GLU SER SER LYS ALA THR LEU GLY HET PG4 A 601 13 HET PGE A 602 10 HET PGE A 603 10 HET ACT A 604 4 HET ACT A 605 4 HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PGE TRIETHYLENE GLYCOL HETNAM ACT ACETATE ION FORMUL 2 PG4 C8 H18 O5 FORMUL 3 PGE 2(C6 H14 O4) FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 7 HOH *193(H2 O) HELIX 1 1 SER A 5 GLY A 15 1 11 HELIX 2 2 GLY A 15 LEU A 31 1 17 HELIX 3 3 PRO A 35 ASP A 56 1 22 HELIX 4 4 SER A 65 ALA A 76 1 12 HELIX 5 5 ASP A 89 LYS A 93 5 5 HELIX 6 6 PRO A 96 HIS A 105 1 10 HELIX 7 7 GLU A 119 ASP A 130 1 12 HELIX 8 8 ASP A 130 HIS A 146 1 17 HELIX 9 9 TYR A 150 GLU A 170 1 21 HELIX 10 10 ASP A 173 GLY A 207 1 35 HELIX 11 11 GLY A 207 PHE A 223 1 17 HELIX 12 12 ASP A 227 HIS A 247 1 21 HELIX 13 13 ASP A 249 HIS A 267 1 19 HELIX 14 14 GLN A 268 ILE A 271 5 4 HELIX 15 15 SER A 272 SER A 273 5 2 HELIX 16 16 HIS A 274 ASP A 280 1 7 HELIX 17 17 PRO A 282 GLY A 292 1 11 HELIX 18 18 ALA A 304 VAL A 310 1 7 HELIX 19 19 ASP A 314 ALA A 322 1 9 HELIX 20 20 ALA A 322 HIS A 338 1 17 HELIX 21 21 SER A 342 CYS A 361 1 20 HELIX 22 22 ASP A 365 ALA A 371 1 7 HELIX 23 23 LYS A 372 PHE A 377 1 6 HELIX 24 24 PHE A 377 VAL A 415 1 39 HELIX 25 25 SER A 419 CYS A 438 1 20 HELIX 26 26 PRO A 441 THR A 467 1 27 HELIX 27 27 SER A 470 SER A 480 1 11 HELIX 28 28 ASP A 483 ALA A 490 1 8 HELIX 29 29 ALA A 511 LEU A 516 5 6 HELIX 30 30 PRO A 517 LYS A 536 1 20 HELIX 31 31 THR A 540 CYS A 558 1 19 HELIX 32 32 CYS A 567 GLY A 584 1 18 SSBOND 1 CYS A 53 CYS A 62 1555 1555 2.01 SSBOND 2 CYS A 75 CYS A 91 1555 1555 2.04 SSBOND 3 CYS A 90 CYS A 101 1555 1555 2.07 SSBOND 4 CYS A 124 CYS A 169 1555 1555 2.07 SSBOND 5 CYS A 168 CYS A 177 1555 1555 2.08 SSBOND 6 CYS A 200 CYS A 246 1555 1555 2.06 SSBOND 7 CYS A 245 CYS A 253 1555 1555 1.99 SSBOND 8 CYS A 265 CYS A 279 1555 1555 2.06 SSBOND 9 CYS A 278 CYS A 289 1555 1555 2.15 SSBOND 10 CYS A 316 CYS A 361 1555 1555 2.06 SSBOND 11 CYS A 360 CYS A 369 1555 1555 2.03 SSBOND 12 CYS A 392 CYS A 438 1555 1555 2.03 SSBOND 13 CYS A 437 CYS A 448 1555 1555 1.99 SSBOND 14 CYS A 461 CYS A 477 1555 1555 2.01 SSBOND 15 CYS A 476 CYS A 487 1555 1555 2.11 SSBOND 16 CYS A 514 CYS A 559 1555 1555 2.04 SSBOND 17 CYS A 558 CYS A 567 1555 1555 2.03 CISPEP 1 GLU A 95 PRO A 96 0 5.01 SITE 1 AC1 1 LEU A 325 SITE 1 AC2 4 TYR A 401 ASN A 405 LYS A 545 VAL A 548 SITE 1 AC3 5 ASN A 391 ARG A 410 TYR A 411 LYS A 414 SITE 2 AC3 5 SER A 489 SITE 1 AC4 6 TYR A 150 LEU A 238 ARG A 257 TYR A 291 SITE 2 AC4 6 HOH A 723 HOH A 780 SITE 1 AC5 3 ARG A 199 TYR A 211 TRP A 214 CRYST1 74.202 79.644 104.223 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013477 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012556 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009595 0.00000