data_4F6N # _entry.id 4F6N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4F6N pdb_00004f6n 10.2210/pdb4f6n/pdb NDB NA1792 ? ? RCSB RCSB072521 ? ? WWPDB D_1000072521 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-09-05 2 'Structure model' 1 1 2012-09-26 3 'Structure model' 1 2 2012-10-03 4 'Structure model' 1 3 2024-02-28 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 26 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 27 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4F6N _pdbx_database_status.recvd_initial_deposition_date 2012-05-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4F6M _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Buck-Koehntop, B.A.' 1 'Stanfield, R.L.' 2 'Ekiert, D.C.' 3 'Martinez-Yamout, M.A.' 4 'Dyson, H.J.' 5 'Wilson, I.A.' 6 'Wright, P.E.' 7 # _citation.id primary _citation.title 'Molecular basis for recognition of methylated and specific DNA sequences by the zinc finger protein Kaiso.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 109 _citation.page_first 15229 _citation.page_last 15234 _citation.year 2012 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22949637 _citation.pdbx_database_id_DOI 10.1073/pnas.1213726109 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Buck-Koehntop, B.A.' 1 ? primary 'Stanfield, R.L.' 2 ? primary 'Ekiert, D.C.' 3 ? primary 'Martinez-Yamout, M.A.' 4 ? primary 'Dyson, H.J.' 5 ? primary 'Wilson, I.A.' 6 ? primary 'Wright, P.E.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator Kaiso' 16086.575 1 ? ? 'zinc finger DNA binding domain' ? 2 polymer syn ;DNA (5'-D(*GP*TP*GP*TP*CP*AP*CP*(5CM)P*GP*(5CM)P*GP*TP*CP*TP*AP*TP*AP*CP*G)-3') ; 5824.801 1 ? ? ? 'MeECad DNA strand 1' 3 polymer syn ;DNA (5'-D(*CP*GP*TP*AP*TP*AP*GP*AP*(5CM)P*GP*(5CM)P*GP*GP*TP*GP*AP*CP*AP*C)-3') ; 5882.853 1 ? ? ? 'MeECad DNA strand 2' 4 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 6 water nat water 18.015 15 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Zinc finger and BTB domain-containing protein 33' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQ CLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYLSDRS ; ;ANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQ CLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYLSDRS ; A ? 2 polydeoxyribonucleotide no yes '(DG)(DT)(DG)(DT)(DC)(DA)(DC)(5CM)(DG)(5CM)(DG)(DT)(DC)(DT)(DA)(DT)(DA)(DC)(DG)' GTGTCACCGCGTCTATACG D ? 3 polydeoxyribonucleotide no yes '(DC)(DG)(DT)(DA)(DT)(DA)(DG)(DA)(5CM)(DG)(5CM)(DG)(DG)(DT)(DG)(DA)(DC)(DA)(DC)' CGTATAGACGCGGTGACAC E ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 GLYCEROL GOL 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASN n 1 3 LYS n 1 4 ARG n 1 5 MET n 1 6 LYS n 1 7 VAL n 1 8 LYS n 1 9 HIS n 1 10 ASP n 1 11 ASP n 1 12 HIS n 1 13 TYR n 1 14 GLU n 1 15 LEU n 1 16 ILE n 1 17 VAL n 1 18 ASP n 1 19 GLY n 1 20 ARG n 1 21 VAL n 1 22 TYR n 1 23 TYR n 1 24 ILE n 1 25 CYS n 1 26 ILE n 1 27 VAL n 1 28 CYS n 1 29 LYS n 1 30 ARG n 1 31 SER n 1 32 TYR n 1 33 VAL n 1 34 CYS n 1 35 LEU n 1 36 THR n 1 37 SER n 1 38 LEU n 1 39 ARG n 1 40 ARG n 1 41 HIS n 1 42 PHE n 1 43 ASN n 1 44 ILE n 1 45 HIS n 1 46 SER n 1 47 TRP n 1 48 GLU n 1 49 LYS n 1 50 LYS n 1 51 TYR n 1 52 PRO n 1 53 CYS n 1 54 ARG n 1 55 TYR n 1 56 CYS n 1 57 GLU n 1 58 LYS n 1 59 VAL n 1 60 PHE n 1 61 PRO n 1 62 LEU n 1 63 ALA n 1 64 GLU n 1 65 TYR n 1 66 ARG n 1 67 THR n 1 68 LYS n 1 69 HIS n 1 70 GLU n 1 71 ILE n 1 72 HIS n 1 73 HIS n 1 74 THR n 1 75 GLY n 1 76 GLU n 1 77 ARG n 1 78 ARG n 1 79 TYR n 1 80 GLN n 1 81 CYS n 1 82 LEU n 1 83 ALA n 1 84 CYS n 1 85 GLY n 1 86 LYS n 1 87 SER n 1 88 PHE n 1 89 ILE n 1 90 ASN n 1 91 TYR n 1 92 GLN n 1 93 PHE n 1 94 MET n 1 95 SER n 1 96 SER n 1 97 HIS n 1 98 ILE n 1 99 LYS n 1 100 SER n 1 101 VAL n 1 102 HIS n 1 103 SER n 1 104 GLN n 1 105 ASP n 1 106 PRO n 1 107 SER n 1 108 GLY n 1 109 ASP n 1 110 SER n 1 111 LYS n 1 112 LEU n 1 113 TYR n 1 114 ARG n 1 115 LEU n 1 116 HIS n 1 117 PRO n 1 118 CYS n 1 119 ARG n 1 120 SER n 1 121 LEU n 1 122 GLN n 1 123 ILE n 1 124 ARG n 1 125 GLN n 1 126 TYR n 1 127 ALA n 1 128 TYR n 1 129 LEU n 1 130 SER n 1 131 ASP n 1 132 ARG n 1 133 SER n 2 1 DG n 2 2 DT n 2 3 DG n 2 4 DT n 2 5 DC n 2 6 DA n 2 7 DC n 2 8 5CM n 2 9 DG n 2 10 5CM n 2 11 DG n 2 12 DT n 2 13 DC n 2 14 DT n 2 15 DA n 2 16 DT n 2 17 DA n 2 18 DC n 2 19 DG n 3 1 DC n 3 2 DG n 3 3 DT n 3 4 DA n 3 5 DT n 3 6 DA n 3 7 DG n 3 8 DA n 3 9 5CM n 3 10 DG n 3 11 5CM n 3 12 DG n 3 13 DG n 3 14 DT n 3 15 DG n 3 16 DA n 3 17 DC n 3 18 DA n 3 19 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ZBTB33, KAISO, ZNF348' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)[DNAY]' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21d _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'Homo sapiens' ? 9606 'This sequence occurs in humans' 3 1 sample ? ? 'Homo sapiens' ? 9606 'This sequence occurs in humans' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 472 ? ? ? A . n A 1 2 ASN 2 473 ? ? ? A . n A 1 3 LYS 3 474 ? ? ? A . n A 1 4 ARG 4 475 ? ? ? A . n A 1 5 MET 5 476 ? ? ? A . n A 1 6 LYS 6 477 ? ? ? A . n A 1 7 VAL 7 478 ? ? ? A . n A 1 8 LYS 8 479 ? ? ? A . n A 1 9 HIS 9 480 ? ? ? A . n A 1 10 ASP 10 481 481 ASP ASP A . n A 1 11 ASP 11 482 482 ASP ASP A . n A 1 12 HIS 12 483 483 HIS HIS A . n A 1 13 TYR 13 484 484 TYR TYR A . n A 1 14 GLU 14 485 485 GLU GLU A . n A 1 15 LEU 15 486 486 LEU LEU A . n A 1 16 ILE 16 487 487 ILE ILE A . n A 1 17 VAL 17 488 488 VAL VAL A . n A 1 18 ASP 18 489 489 ASP ASP A . n A 1 19 GLY 19 490 490 GLY GLY A . n A 1 20 ARG 20 491 491 ARG ARG A . n A 1 21 VAL 21 492 492 VAL VAL A . n A 1 22 TYR 22 493 493 TYR TYR A . n A 1 23 TYR 23 494 494 TYR TYR A . n A 1 24 ILE 24 495 495 ILE ILE A . n A 1 25 CYS 25 496 496 CYS CYS A . n A 1 26 ILE 26 497 497 ILE ILE A . n A 1 27 VAL 27 498 498 VAL VAL A . n A 1 28 CYS 28 499 499 CYS CYS A . n A 1 29 LYS 29 500 500 LYS LYS A . n A 1 30 ARG 30 501 501 ARG ARG A . n A 1 31 SER 31 502 502 SER SER A . n A 1 32 TYR 32 503 503 TYR TYR A . n A 1 33 VAL 33 504 504 VAL VAL A . n A 1 34 CYS 34 505 505 CYS CYS A . n A 1 35 LEU 35 506 506 LEU LEU A . n A 1 36 THR 36 507 507 THR THR A . n A 1 37 SER 37 508 508 SER SER A . n A 1 38 LEU 38 509 509 LEU LEU A . n A 1 39 ARG 39 510 510 ARG ARG A . n A 1 40 ARG 40 511 511 ARG ARG A . n A 1 41 HIS 41 512 512 HIS HIS A . n A 1 42 PHE 42 513 513 PHE PHE A . n A 1 43 ASN 43 514 514 ASN ASN A . n A 1 44 ILE 44 515 515 ILE ILE A . n A 1 45 HIS 45 516 516 HIS HIS A . n A 1 46 SER 46 517 517 SER SER A . n A 1 47 TRP 47 518 518 TRP TRP A . n A 1 48 GLU 48 519 519 GLU GLU A . n A 1 49 LYS 49 520 520 LYS LYS A . n A 1 50 LYS 50 521 521 LYS LYS A . n A 1 51 TYR 51 522 522 TYR TYR A . n A 1 52 PRO 52 523 523 PRO PRO A . n A 1 53 CYS 53 524 524 CYS CYS A . n A 1 54 ARG 54 525 525 ARG ARG A . n A 1 55 TYR 55 526 526 TYR TYR A . n A 1 56 CYS 56 527 527 CYS CYS A . n A 1 57 GLU 57 528 528 GLU GLU A . n A 1 58 LYS 58 529 529 LYS LYS A . n A 1 59 VAL 59 530 530 VAL VAL A . n A 1 60 PHE 60 531 531 PHE PHE A . n A 1 61 PRO 61 532 532 PRO PRO A . n A 1 62 LEU 62 533 533 LEU LEU A . n A 1 63 ALA 63 534 534 ALA ALA A . n A 1 64 GLU 64 535 535 GLU GLU A . n A 1 65 TYR 65 536 536 TYR TYR A . n A 1 66 ARG 66 537 537 ARG ARG A . n A 1 67 THR 67 538 538 THR THR A . n A 1 68 LYS 68 539 539 LYS LYS A . n A 1 69 HIS 69 540 540 HIS HIS A . n A 1 70 GLU 70 541 541 GLU GLU A . n A 1 71 ILE 71 542 542 ILE ILE A . n A 1 72 HIS 72 543 543 HIS HIS A . n A 1 73 HIS 73 544 544 HIS HIS A . n A 1 74 THR 74 545 545 THR THR A . n A 1 75 GLY 75 546 546 GLY GLY A . n A 1 76 GLU 76 547 547 GLU GLU A . n A 1 77 ARG 77 548 548 ARG ARG A . n A 1 78 ARG 78 549 549 ARG ARG A . n A 1 79 TYR 79 550 550 TYR TYR A . n A 1 80 GLN 80 551 551 GLN GLN A . n A 1 81 CYS 81 552 552 CYS CYS A . n A 1 82 LEU 82 553 553 LEU LEU A . n A 1 83 ALA 83 554 554 ALA ALA A . n A 1 84 CYS 84 555 555 CYS CYS A . n A 1 85 GLY 85 556 556 GLY GLY A . n A 1 86 LYS 86 557 557 LYS LYS A . n A 1 87 SER 87 558 558 SER SER A . n A 1 88 PHE 88 559 559 PHE PHE A . n A 1 89 ILE 89 560 560 ILE ILE A . n A 1 90 ASN 90 561 561 ASN ASN A . n A 1 91 TYR 91 562 562 TYR TYR A . n A 1 92 GLN 92 563 563 GLN GLN A . n A 1 93 PHE 93 564 564 PHE PHE A . n A 1 94 MET 94 565 565 MET MET A . n A 1 95 SER 95 566 566 SER SER A . n A 1 96 SER 96 567 567 SER SER A . n A 1 97 HIS 97 568 568 HIS HIS A . n A 1 98 ILE 98 569 569 ILE ILE A . n A 1 99 LYS 99 570 570 LYS LYS A . n A 1 100 SER 100 571 571 SER SER A . n A 1 101 VAL 101 572 572 VAL VAL A . n A 1 102 HIS 102 573 573 HIS HIS A . n A 1 103 SER 103 574 574 SER SER A . n A 1 104 GLN 104 575 575 GLN GLN A . n A 1 105 ASP 105 576 576 ASP ASP A . n A 1 106 PRO 106 577 577 PRO PRO A . n A 1 107 SER 107 578 578 SER SER A . n A 1 108 GLY 108 579 579 GLY GLY A . n A 1 109 ASP 109 580 580 ASP ASP A . n A 1 110 SER 110 581 581 SER SER A . n A 1 111 LYS 111 582 582 LYS LYS A . n A 1 112 LEU 112 583 583 LEU LEU A . n A 1 113 TYR 113 584 584 TYR TYR A . n A 1 114 ARG 114 585 585 ARG ARG A . n A 1 115 LEU 115 586 586 LEU LEU A . n A 1 116 HIS 116 587 587 HIS HIS A . n A 1 117 PRO 117 588 588 PRO PRO A . n A 1 118 CYS 118 589 589 CYS CYS A . n A 1 119 ARG 119 590 590 ARG ARG A . n A 1 120 SER 120 591 591 SER SER A . n A 1 121 LEU 121 592 592 LEU LEU A . n A 1 122 GLN 122 593 593 GLN GLN A . n A 1 123 ILE 123 594 594 ILE ILE A . n A 1 124 ARG 124 595 595 ARG ARG A . n A 1 125 GLN 125 596 596 GLN GLN A . n A 1 126 TYR 126 597 597 TYR TYR A . n A 1 127 ALA 127 598 598 ALA ALA A . n A 1 128 TYR 128 599 599 TYR TYR A . n A 1 129 LEU 129 600 600 LEU LEU A . n A 1 130 SER 130 601 ? ? ? A . n A 1 131 ASP 131 602 ? ? ? A . n A 1 132 ARG 132 603 ? ? ? A . n A 1 133 SER 133 604 ? ? ? A . n B 2 1 DG 1 1 1 DG G D . n B 2 2 DT 2 2 2 DT T D . n B 2 3 DG 3 3 3 DG G D . n B 2 4 DT 4 4 4 DT T D . n B 2 5 DC 5 5 5 DC C D . n B 2 6 DA 6 6 6 DA A D . n B 2 7 DC 7 7 7 DC C D . n B 2 8 5CM 8 8 8 5CM 5CM D . n B 2 9 DG 9 9 9 DG G D . n B 2 10 5CM 10 10 10 5CM 5CM D . n B 2 11 DG 11 11 11 DG G D . n B 2 12 DT 12 12 12 DT T D . n B 2 13 DC 13 13 13 DC C D . n B 2 14 DT 14 14 14 DT T D . n B 2 15 DA 15 15 15 DA A D . n B 2 16 DT 16 16 16 DT T D . n B 2 17 DA 17 17 17 DA A D . n B 2 18 DC 18 18 18 DC C D . n B 2 19 DG 19 19 19 DG G D . n C 3 1 DC 1 20 ? ? ? E . n C 3 2 DG 2 21 21 DG G E . n C 3 3 DT 3 22 22 DT T E . n C 3 4 DA 4 23 23 DA A E . n C 3 5 DT 5 24 24 DT T E . n C 3 6 DA 6 25 25 DA A E . n C 3 7 DG 7 26 26 DG G E . n C 3 8 DA 8 27 27 DA A E . n C 3 9 5CM 9 28 28 5CM 5CM E . n C 3 10 DG 10 29 29 DG G E . n C 3 11 5CM 11 30 30 5CM 5CM E . n C 3 12 DG 12 31 31 DG G E . n C 3 13 DG 13 32 32 DG G E . n C 3 14 DT 14 33 33 DT T E . n C 3 15 DG 15 34 34 DG G E . n C 3 16 DA 16 35 35 DA A E . n C 3 17 DC 17 36 36 DC C E . n C 3 18 DA 18 37 37 DA A E . n C 3 19 DC 19 38 38 DC C E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 701 1 ZN ZN A . E 4 ZN 1 702 2 ZN ZN A . F 4 ZN 1 703 3 ZN ZN A . G 5 GOL 1 704 2 GOL GOL A . H 5 GOL 1 101 1 GOL GOL D . I 6 HOH 1 801 1 HOH HOH A . I 6 HOH 2 802 2 HOH HOH A . I 6 HOH 3 803 3 HOH HOH A . I 6 HOH 4 804 4 HOH HOH A . I 6 HOH 5 805 5 HOH HOH A . I 6 HOH 6 806 6 HOH HOH A . I 6 HOH 7 807 7 HOH HOH A . I 6 HOH 8 808 8 HOH HOH A . I 6 HOH 9 809 9 HOH HOH A . I 6 HOH 10 810 11 HOH HOH A . I 6 HOH 11 811 13 HOH HOH A . I 6 HOH 12 812 14 HOH HOH A . I 6 HOH 13 813 15 HOH HOH A . J 6 HOH 1 201 16 HOH HOH D . K 6 HOH 1 101 12 HOH HOH E . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 4F6N _cell.length_a 44.049 _cell.length_b 183.402 _cell.length_c 230.138 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4F6N _symmetry.space_group_name_H-M 'F 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4F6N _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.18 _exptl_crystal.density_percent_sol 70.58 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '1M NaCl, 0.1M sodium cacodylate, 10% glycerol, 30% Peg 600, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2010-05-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 4F6N _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_high 2.8 _reflns.d_resolution_low 65.0 _reflns.number_obs 11780 _reflns.number_all 11780 _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs .087 _reflns.pdbx_Rsym_value .087 _reflns.pdbx_netI_over_sigmaI 23.0 _reflns.B_iso_Wilson_estimate 72.0 _reflns.pdbx_redundancy 7.36 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.85 _reflns_shell.percent_possible_all 92.4 _reflns_shell.Rmerge_I_obs .581 _reflns_shell.pdbx_Rsym_value .581 _reflns_shell.meanI_over_sigI_obs 3.3 _reflns_shell.pdbx_redundancy 7.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 536 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4F6N _refine.ls_number_reflns_obs 11779 _refine.ls_number_reflns_all 11779 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 65.00 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 99.32 _refine.ls_R_factor_obs 0.23009 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22847 _refine.ls_R_factor_R_free 0.26148 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 558 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.926 _refine.correlation_coeff_Fo_to_Fc_free 0.902 _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'Kaiso from complex with Kaiso binding site protein' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.440 _refine.pdbx_overall_ESU_R_Free 0.300 _refine.overall_SU_ML 0.228 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1020 _refine_hist.pdbx_number_atoms_nucleic_acid 761 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 15 _refine_hist.number_atoms_total 1811 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 65.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.011 0.021 ? 1965 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.579 2.435 ? 2755 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.364 5.000 ? 119 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 30.590 21.273 ? 55 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 18.155 15.000 ? 185 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 18.264 15.000 ? 11 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.004 0.020 ? 1201 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.800 _refine_ls_shell.d_res_low 2.873 _refine_ls_shell.number_reflns_R_work 763 _refine_ls_shell.R_factor_R_work 0.389 _refine_ls_shell.percent_reflns_obs 94.83 _refine_ls_shell.R_factor_R_free 0.458 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 763 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4F6N _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4F6N _struct.title 'Crystal structure of Kaiso zinc finger DNA binding protein in complex with methylated CpG site DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4F6N _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text 'zinc finger, protein-DNA complex, double helix, DNA binding, DNA, DNA BINDING PROTEIN-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 6 ? J N N 6 ? K N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP KAISO_HUMAN Q86T24 1 ;ANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQ CLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYLSDRS ; 472 ? 2 PDB 4F6N 4F6N 2 ? ? ? 3 PDB 4F6N 4F6N 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4F6N A 1 ? 133 ? Q86T24 472 ? 604 ? 472 604 2 2 4F6N D 1 ? 19 ? 4F6N 1 ? 19 ? 1 19 3 3 4F6N E 1 ? 19 ? 4F6N 20 ? 38 ? 20 38 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7950 ? 1 MORE 5 ? 1 'SSA (A^2)' 11780 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 34 ? TRP A 47 ? CYS A 505 TRP A 518 1 ? 14 HELX_P HELX_P2 2 LEU A 62 ? GLY A 75 ? LEU A 533 GLY A 546 1 ? 14 HELX_P HELX_P3 3 ASN A 90 ? SER A 103 ? ASN A 561 SER A 574 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 7 "O3'" ? ? ? 1_555 B 5CM 8 P ? ? D DC 7 D 5CM 8 1_555 ? ? ? ? ? ? ? 1.580 ? ? covale2 covale both ? B 5CM 8 "O3'" ? ? ? 1_555 B DG 9 P ? ? D 5CM 8 D DG 9 1_555 ? ? ? ? ? ? ? 1.583 ? ? covale3 covale both ? B DG 9 "O3'" ? ? ? 1_555 B 5CM 10 P ? ? D DG 9 D 5CM 10 1_555 ? ? ? ? ? ? ? 1.576 ? ? covale4 covale both ? B 5CM 10 "O3'" ? ? ? 1_555 B DG 11 P ? ? D 5CM 10 D DG 11 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale5 covale both ? C DA 8 "O3'" ? ? ? 1_555 C 5CM 9 P ? ? E DA 27 E 5CM 28 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale6 covale both ? C 5CM 9 "O3'" ? ? ? 1_555 C DG 10 P ? ? E 5CM 28 E DG 29 1_555 ? ? ? ? ? ? ? 1.576 ? ? covale7 covale both ? C DG 10 "O3'" ? ? ? 1_555 C 5CM 11 P ? ? E DG 29 E 5CM 30 1_555 ? ? ? ? ? ? ? 1.585 ? ? covale8 covale both ? C 5CM 11 "O3'" ? ? ? 1_555 C DG 12 P ? ? E 5CM 30 E DG 31 1_555 ? ? ? ? ? ? ? 1.576 ? ? metalc1 metalc ? ? A CYS 25 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 496 A ZN 701 1_555 ? ? ? ? ? ? ? 2.294 ? ? metalc2 metalc ? ? A CYS 28 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 499 A ZN 701 1_555 ? ? ? ? ? ? ? 2.293 ? ? metalc3 metalc ? ? A HIS 41 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 512 A ZN 701 1_555 ? ? ? ? ? ? ? 2.064 ? ? metalc4 metalc ? ? A HIS 45 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 516 A ZN 701 1_555 ? ? ? ? ? ? ? 2.069 ? ? metalc5 metalc ? ? A CYS 53 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 524 A ZN 702 1_555 ? ? ? ? ? ? ? 2.290 ? ? metalc6 metalc ? ? A CYS 56 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 527 A ZN 702 1_555 ? ? ? ? ? ? ? 2.284 ? ? metalc7 metalc ? ? A HIS 69 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 540 A ZN 702 1_555 ? ? ? ? ? ? ? 2.066 ? ? metalc8 metalc ? ? A HIS 73 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 544 A ZN 702 1_555 ? ? ? ? ? ? ? 2.074 ? ? metalc9 metalc ? ? A CYS 81 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 552 A ZN 703 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc10 metalc ? ? A CYS 84 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 555 A ZN 703 1_555 ? ? ? ? ? ? ? 2.269 ? ? metalc11 metalc ? ? A HIS 97 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 568 A ZN 703 1_555 ? ? ? ? ? ? ? 2.038 ? ? metalc12 metalc ? ? A HIS 102 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 573 A ZN 703 1_555 ? ? ? ? ? ? ? 2.074 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 19 N3 ? ? D DG 1 E DC 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 19 O2 ? ? D DG 1 E DC 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 19 N4 ? ? D DG 1 E DC 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 C DA 18 N1 ? ? D DT 2 E DA 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 C DA 18 N6 ? ? D DT 2 E DA 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 17 N3 ? ? D DG 3 E DC 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 17 O2 ? ? D DG 3 E DC 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 17 N4 ? ? D DG 3 E DC 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 16 N1 ? ? D DT 4 E DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 16 N6 ? ? D DT 4 E DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 15 N1 ? ? D DC 5 E DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 15 O6 ? ? D DC 5 E DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 15 N2 ? ? D DC 5 E DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 14 N3 ? ? D DA 6 E DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 14 O4 ? ? D DA 6 E DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 7 N3 ? ? ? 1_555 C DG 13 N1 ? ? D DC 7 E DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 7 N4 ? ? ? 1_555 C DG 13 O6 ? ? D DC 7 E DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 13 N2 ? ? D DC 7 E DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B 5CM 8 N3 ? ? ? 1_555 C DG 12 N1 ? ? D 5CM 8 E DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B 5CM 8 N4 ? ? ? 1_555 C DG 12 O6 ? ? D 5CM 8 E DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B 5CM 8 O2 ? ? ? 1_555 C DG 12 N2 ? ? D 5CM 8 E DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C 5CM 11 N3 ? ? D DG 9 E 5CM 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C 5CM 11 O2 ? ? D DG 9 E 5CM 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C 5CM 11 N4 ? ? D DG 9 E 5CM 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B 5CM 10 N3 ? ? ? 1_555 C DG 10 N1 ? ? D 5CM 10 E DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B 5CM 10 N4 ? ? ? 1_555 C DG 10 O6 ? ? D 5CM 10 E DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B 5CM 10 O2 ? ? ? 1_555 C DG 10 N2 ? ? D 5CM 10 E DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C 5CM 9 N3 ? ? D DG 11 E 5CM 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C 5CM 9 O2 ? ? D DG 11 E 5CM 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C 5CM 9 N4 ? ? D DG 11 E 5CM 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 8 N1 ? ? D DT 12 E DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 8 N6 ? ? D DT 12 E DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 7 N1 ? ? D DC 13 E DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 7 O6 ? ? D DC 13 E DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 7 N2 ? ? D DC 13 E DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DT 14 N3 ? ? ? 1_555 C DA 6 N1 ? ? D DT 14 E DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DT 14 O4 ? ? ? 1_555 C DA 6 N6 ? ? D DT 14 E DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DA 15 N1 ? ? ? 1_555 C DT 5 N3 ? ? D DA 15 E DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DA 15 N6 ? ? ? 1_555 C DT 5 O4 ? ? D DA 15 E DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DT 16 N3 ? ? ? 1_555 C DA 4 N1 ? ? D DT 16 E DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DT 16 O4 ? ? ? 1_555 C DA 4 N6 ? ? D DT 16 E DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DA 17 N1 ? ? ? 1_555 C DT 3 N3 ? ? D DA 17 E DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DA 17 N6 ? ? ? 1_555 C DT 3 O4 ? ? D DA 17 E DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DC 18 N3 ? ? ? 1_555 C DG 2 N1 ? ? D DC 18 E DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DC 18 N4 ? ? ? 1_555 C DG 2 O6 ? ? D DC 18 E DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DC 18 O2 ? ? ? 1_555 C DG 2 N2 ? ? D DC 18 E DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 25 ? A CYS 496 ? 1_555 ZN ? D ZN . ? A ZN 701 ? 1_555 SG ? A CYS 28 ? A CYS 499 ? 1_555 109.6 ? 2 SG ? A CYS 25 ? A CYS 496 ? 1_555 ZN ? D ZN . ? A ZN 701 ? 1_555 NE2 ? A HIS 41 ? A HIS 512 ? 1_555 109.5 ? 3 SG ? A CYS 28 ? A CYS 499 ? 1_555 ZN ? D ZN . ? A ZN 701 ? 1_555 NE2 ? A HIS 41 ? A HIS 512 ? 1_555 109.3 ? 4 SG ? A CYS 25 ? A CYS 496 ? 1_555 ZN ? D ZN . ? A ZN 701 ? 1_555 NE2 ? A HIS 45 ? A HIS 516 ? 1_555 109.6 ? 5 SG ? A CYS 28 ? A CYS 499 ? 1_555 ZN ? D ZN . ? A ZN 701 ? 1_555 NE2 ? A HIS 45 ? A HIS 516 ? 1_555 109.6 ? 6 NE2 ? A HIS 41 ? A HIS 512 ? 1_555 ZN ? D ZN . ? A ZN 701 ? 1_555 NE2 ? A HIS 45 ? A HIS 516 ? 1_555 109.3 ? 7 SG ? A CYS 53 ? A CYS 524 ? 1_555 ZN ? E ZN . ? A ZN 702 ? 1_555 SG ? A CYS 56 ? A CYS 527 ? 1_555 109.7 ? 8 SG ? A CYS 53 ? A CYS 524 ? 1_555 ZN ? E ZN . ? A ZN 702 ? 1_555 NE2 ? A HIS 69 ? A HIS 540 ? 1_555 109.4 ? 9 SG ? A CYS 56 ? A CYS 527 ? 1_555 ZN ? E ZN . ? A ZN 702 ? 1_555 NE2 ? A HIS 69 ? A HIS 540 ? 1_555 109.5 ? 10 SG ? A CYS 53 ? A CYS 524 ? 1_555 ZN ? E ZN . ? A ZN 702 ? 1_555 NE2 ? A HIS 73 ? A HIS 544 ? 1_555 109.5 ? 11 SG ? A CYS 56 ? A CYS 527 ? 1_555 ZN ? E ZN . ? A ZN 702 ? 1_555 NE2 ? A HIS 73 ? A HIS 544 ? 1_555 109.5 ? 12 NE2 ? A HIS 69 ? A HIS 540 ? 1_555 ZN ? E ZN . ? A ZN 702 ? 1_555 NE2 ? A HIS 73 ? A HIS 544 ? 1_555 109.2 ? 13 SG ? A CYS 81 ? A CYS 552 ? 1_555 ZN ? F ZN . ? A ZN 703 ? 1_555 SG ? A CYS 84 ? A CYS 555 ? 1_555 109.5 ? 14 SG ? A CYS 81 ? A CYS 552 ? 1_555 ZN ? F ZN . ? A ZN 703 ? 1_555 NE2 ? A HIS 97 ? A HIS 568 ? 1_555 109.6 ? 15 SG ? A CYS 84 ? A CYS 555 ? 1_555 ZN ? F ZN . ? A ZN 703 ? 1_555 NE2 ? A HIS 97 ? A HIS 568 ? 1_555 109.6 ? 16 SG ? A CYS 81 ? A CYS 552 ? 1_555 ZN ? F ZN . ? A ZN 703 ? 1_555 NE2 ? A HIS 102 ? A HIS 573 ? 1_555 109.2 ? 17 SG ? A CYS 84 ? A CYS 555 ? 1_555 ZN ? F ZN . ? A ZN 703 ? 1_555 NE2 ? A HIS 102 ? A HIS 573 ? 1_555 109.6 ? 18 NE2 ? A HIS 97 ? A HIS 568 ? 1_555 ZN ? F ZN . ? A ZN 703 ? 1_555 NE2 ? A HIS 102 ? A HIS 573 ? 1_555 109.4 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 12 ? VAL A 17 ? HIS A 483 VAL A 488 A 2 ARG A 20 ? CYS A 25 ? ARG A 491 CYS A 496 A 3 SER A 31 ? TYR A 32 ? SER A 502 TYR A 503 B 1 TYR A 51 ? PRO A 52 ? TYR A 522 PRO A 523 B 2 VAL A 59 ? PHE A 60 ? VAL A 530 PHE A 531 C 1 SER A 87 ? PHE A 88 ? SER A 558 PHE A 559 C 2 TYR A 79 ? CYS A 81 ? TYR A 550 CYS A 552 C 3 TYR A 113 ? LEU A 115 ? TYR A 584 LEU A 586 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 13 ? N TYR A 484 O ILE A 24 ? O ILE A 495 A 2 3 N TYR A 23 ? N TYR A 494 O TYR A 32 ? O TYR A 503 B 1 2 N TYR A 51 ? N TYR A 522 O PHE A 60 ? O PHE A 531 C 1 2 O PHE A 88 ? O PHE A 559 N TYR A 79 ? N TYR A 550 C 2 3 N GLN A 80 ? N GLN A 551 O ARG A 114 ? O ARG A 585 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 701 ? 4 'BINDING SITE FOR RESIDUE ZN A 701' AC2 Software A ZN 702 ? 4 'BINDING SITE FOR RESIDUE ZN A 702' AC3 Software A ZN 703 ? 4 'BINDING SITE FOR RESIDUE ZN A 703' AC4 Software A GOL 704 ? 3 'BINDING SITE FOR RESIDUE GOL A 704' AC5 Software D GOL 101 ? 6 'BINDING SITE FOR RESIDUE GOL D 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 25 ? CYS A 496 . ? 1_555 ? 2 AC1 4 CYS A 28 ? CYS A 499 . ? 1_555 ? 3 AC1 4 HIS A 41 ? HIS A 512 . ? 1_555 ? 4 AC1 4 HIS A 45 ? HIS A 516 . ? 1_555 ? 5 AC2 4 CYS A 53 ? CYS A 524 . ? 1_555 ? 6 AC2 4 CYS A 56 ? CYS A 527 . ? 1_555 ? 7 AC2 4 HIS A 69 ? HIS A 540 . ? 1_555 ? 8 AC2 4 HIS A 73 ? HIS A 544 . ? 1_555 ? 9 AC3 4 CYS A 81 ? CYS A 552 . ? 1_555 ? 10 AC3 4 CYS A 84 ? CYS A 555 . ? 1_555 ? 11 AC3 4 HIS A 97 ? HIS A 568 . ? 1_555 ? 12 AC3 4 HIS A 102 ? HIS A 573 . ? 1_555 ? 13 AC4 3 TYR A 65 ? TYR A 536 . ? 1_555 ? 14 AC4 3 LYS A 68 ? LYS A 539 . ? 1_555 ? 15 AC4 3 DA B 6 ? DA D 6 . ? 1_555 ? 16 AC5 6 DG B 3 ? DG D 3 . ? 1_555 ? 17 AC5 6 DT B 4 ? DT D 4 . ? 1_555 ? 18 AC5 6 DC B 5 ? DC D 5 . ? 1_555 ? 19 AC5 6 HOH J . ? HOH D 201 . ? 1_555 ? 20 AC5 6 DC C 17 ? DC E 36 . ? 1_555 ? 21 AC5 6 DA C 18 ? DA E 37 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C2 D DG 19 ? ? N3 D DG 19 ? ? 1.494 1.323 0.171 0.008 N 2 1 C2 D DG 19 ? ? N2 D DG 19 ? ? 1.498 1.341 0.157 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" D DA 6 ? ? "C1'" D DA 6 ? ? N9 D DA 6 ? ? 103.38 108.00 -4.62 0.70 N 2 1 "O4'" D DC 7 ? ? "C1'" D DC 7 ? ? N1 D DC 7 ? ? 102.97 108.00 -5.03 0.70 N 3 1 "C3'" D DT 12 ? ? "C2'" D DT 12 ? ? "C1'" D DT 12 ? ? 97.60 102.40 -4.80 0.80 N 4 1 "O4'" D DT 12 ? ? "C1'" D DT 12 ? ? N1 D DT 12 ? ? 110.93 108.30 2.63 0.30 N 5 1 "O4'" D DC 13 ? ? "C1'" D DC 13 ? ? N1 D DC 13 ? ? 111.64 108.30 3.34 0.30 N 6 1 "O4'" D DA 17 ? ? "C1'" D DA 17 ? ? N9 D DA 17 ? ? 110.12 108.30 1.82 0.30 N 7 1 "O4'" D DC 18 ? ? "C1'" D DC 18 ? ? N1 D DC 18 ? ? 110.82 108.30 2.52 0.30 N 8 1 N1 D DG 19 ? ? C2 D DG 19 ? ? N3 D DG 19 ? ? 116.36 123.90 -7.54 0.60 N 9 1 N1 D DG 19 ? ? C2 D DG 19 ? ? N2 D DG 19 ? ? 102.16 116.20 -14.04 0.90 N 10 1 N3 D DG 19 ? ? C2 D DG 19 ? ? N2 D DG 19 ? ? 141.48 119.90 21.58 0.70 N 11 1 "O4'" E DG 21 ? ? "C1'" E DG 21 ? ? N9 E DG 21 ? ? 112.80 108.30 4.50 0.30 N 12 1 "O4'" E DT 22 ? ? "C1'" E DT 22 ? ? N1 E DT 22 ? ? 110.12 108.30 1.82 0.30 N 13 1 "O4'" E DT 24 ? ? "C1'" E DT 24 ? ? N1 E DT 24 ? ? 110.78 108.30 2.48 0.30 N 14 1 "O4'" E DA 25 ? ? "C1'" E DA 25 ? ? N9 E DA 25 ? ? 110.89 108.30 2.59 0.30 N 15 1 "O4'" E DG 29 ? ? "C1'" E DG 29 ? ? N9 E DG 29 ? ? 103.11 108.00 -4.89 0.70 N 16 1 "O4'" E DG 31 ? ? "C1'" E DG 31 ? ? N9 E DG 31 ? ? 102.80 108.00 -5.20 0.70 N 17 1 "O4'" E DG 32 ? ? "C1'" E DG 32 ? ? N9 E DG 32 ? ? 111.84 108.30 3.54 0.30 N 18 1 "O4'" E DA 35 ? ? "C1'" E DA 35 ? ? N9 E DA 35 ? ? 102.46 108.00 -5.54 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 489 ? ? 25.43 73.97 2 1 ILE A 515 ? ? -39.19 -37.51 3 1 SER A 574 ? ? 38.66 49.22 4 1 ASP A 580 ? ? 57.50 -38.48 5 1 ALA A 598 ? ? -58.05 -7.86 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B 5CM 8 D 5CM 8 ? DC ? 2 B 5CM 10 D 5CM 10 ? DC ? 3 C 5CM 9 E 5CM 28 ? DC ? 4 C 5CM 11 E 5CM 30 ? DC ? # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 802 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id I _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -14.6827 -27.2737 24.1289 0.1805 0.1884 0.2151 0.0506 0.0302 0.0050 2.1190 8.7494 1.8565 0.3415 0.6568 0.6478 -0.0354 -0.0430 0.3029 0.5372 0.1238 -0.2909 -0.4351 0.0419 -0.0885 'X-RAY DIFFRACTION' 2 ? refined -16.8148 -23.0558 29.4536 0.4464 0.3147 0.2965 0.0321 0.0665 -0.0183 4.2832 5.1503 7.5288 0.4622 -1.4029 0.1268 0.1324 -0.8271 0.2844 0.8652 0.0594 -0.1733 -1.0375 0.3513 -0.1918 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 481 ? ? A 600 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 D 1 ? ? D 19 ? ? ? ? 'X-RAY DIFFRACTION' 3 2 E 21 ? ? E 38 ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 472 ? A ALA 1 2 1 Y 1 A ASN 473 ? A ASN 2 3 1 Y 1 A LYS 474 ? A LYS 3 4 1 Y 1 A ARG 475 ? A ARG 4 5 1 Y 1 A MET 476 ? A MET 5 6 1 Y 1 A LYS 477 ? A LYS 6 7 1 Y 1 A VAL 478 ? A VAL 7 8 1 Y 1 A LYS 479 ? A LYS 8 9 1 Y 1 A HIS 480 ? A HIS 9 10 1 Y 1 A SER 601 ? A SER 130 11 1 Y 1 A ASP 602 ? A ASP 131 12 1 Y 1 A ARG 603 ? A ARG 132 13 1 Y 1 A SER 604 ? A SER 133 14 1 Y 1 E DC 20 ? C DC 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 DA OP3 O N N 125 DA P P N N 126 DA OP1 O N N 127 DA OP2 O N N 128 DA "O5'" O N N 129 DA "C5'" C N N 130 DA "C4'" C N R 131 DA "O4'" O N N 132 DA "C3'" C N S 133 DA "O3'" O N N 134 DA "C2'" C N N 135 DA "C1'" C N R 136 DA N9 N Y N 137 DA C8 C Y N 138 DA N7 N Y N 139 DA C5 C Y N 140 DA C6 C Y N 141 DA N6 N N N 142 DA N1 N Y N 143 DA C2 C Y N 144 DA N3 N Y N 145 DA C4 C Y N 146 DA HOP3 H N N 147 DA HOP2 H N N 148 DA "H5'" H N N 149 DA "H5''" H N N 150 DA "H4'" H N N 151 DA "H3'" H N N 152 DA "HO3'" H N N 153 DA "H2'" H N N 154 DA "H2''" H N N 155 DA "H1'" H N N 156 DA H8 H N N 157 DA H61 H N N 158 DA H62 H N N 159 DA H2 H N N 160 DC OP3 O N N 161 DC P P N N 162 DC OP1 O N N 163 DC OP2 O N N 164 DC "O5'" O N N 165 DC "C5'" C N N 166 DC "C4'" C N R 167 DC "O4'" O N N 168 DC "C3'" C N S 169 DC "O3'" O N N 170 DC "C2'" C N N 171 DC "C1'" C N R 172 DC N1 N N N 173 DC C2 C N N 174 DC O2 O N N 175 DC N3 N N N 176 DC C4 C N N 177 DC N4 N N N 178 DC C5 C N N 179 DC C6 C N N 180 DC HOP3 H N N 181 DC HOP2 H N N 182 DC "H5'" H N N 183 DC "H5''" H N N 184 DC "H4'" H N N 185 DC "H3'" H N N 186 DC "HO3'" H N N 187 DC "H2'" H N N 188 DC "H2''" H N N 189 DC "H1'" H N N 190 DC H41 H N N 191 DC H42 H N N 192 DC H5 H N N 193 DC H6 H N N 194 DG OP3 O N N 195 DG P P N N 196 DG OP1 O N N 197 DG OP2 O N N 198 DG "O5'" O N N 199 DG "C5'" C N N 200 DG "C4'" C N R 201 DG "O4'" O N N 202 DG "C3'" C N S 203 DG "O3'" O N N 204 DG "C2'" C N N 205 DG "C1'" C N R 206 DG N9 N Y N 207 DG C8 C Y N 208 DG N7 N Y N 209 DG C5 C Y N 210 DG C6 C N N 211 DG O6 O N N 212 DG N1 N N N 213 DG C2 C N N 214 DG N2 N N N 215 DG N3 N N N 216 DG C4 C Y N 217 DG HOP3 H N N 218 DG HOP2 H N N 219 DG "H5'" H N N 220 DG "H5''" H N N 221 DG "H4'" H N N 222 DG "H3'" H N N 223 DG "HO3'" H N N 224 DG "H2'" H N N 225 DG "H2''" H N N 226 DG "H1'" H N N 227 DG H8 H N N 228 DG H1 H N N 229 DG H21 H N N 230 DG H22 H N N 231 DT OP3 O N N 232 DT P P N N 233 DT OP1 O N N 234 DT OP2 O N N 235 DT "O5'" O N N 236 DT "C5'" C N N 237 DT "C4'" C N R 238 DT "O4'" O N N 239 DT "C3'" C N S 240 DT "O3'" O N N 241 DT "C2'" C N N 242 DT "C1'" C N R 243 DT N1 N N N 244 DT C2 C N N 245 DT O2 O N N 246 DT N3 N N N 247 DT C4 C N N 248 DT O4 O N N 249 DT C5 C N N 250 DT C7 C N N 251 DT C6 C N N 252 DT HOP3 H N N 253 DT HOP2 H N N 254 DT "H5'" H N N 255 DT "H5''" H N N 256 DT "H4'" H N N 257 DT "H3'" H N N 258 DT "HO3'" H N N 259 DT "H2'" H N N 260 DT "H2''" H N N 261 DT "H1'" H N N 262 DT H3 H N N 263 DT H71 H N N 264 DT H72 H N N 265 DT H73 H N N 266 DT H6 H N N 267 GLN N N N N 268 GLN CA C N S 269 GLN C C N N 270 GLN O O N N 271 GLN CB C N N 272 GLN CG C N N 273 GLN CD C N N 274 GLN OE1 O N N 275 GLN NE2 N N N 276 GLN OXT O N N 277 GLN H H N N 278 GLN H2 H N N 279 GLN HA H N N 280 GLN HB2 H N N 281 GLN HB3 H N N 282 GLN HG2 H N N 283 GLN HG3 H N N 284 GLN HE21 H N N 285 GLN HE22 H N N 286 GLN HXT H N N 287 GLU N N N N 288 GLU CA C N S 289 GLU C C N N 290 GLU O O N N 291 GLU CB C N N 292 GLU CG C N N 293 GLU CD C N N 294 GLU OE1 O N N 295 GLU OE2 O N N 296 GLU OXT O N N 297 GLU H H N N 298 GLU H2 H N N 299 GLU HA H N N 300 GLU HB2 H N N 301 GLU HB3 H N N 302 GLU HG2 H N N 303 GLU HG3 H N N 304 GLU HE2 H N N 305 GLU HXT H N N 306 GLY N N N N 307 GLY CA C N N 308 GLY C C N N 309 GLY O O N N 310 GLY OXT O N N 311 GLY H H N N 312 GLY H2 H N N 313 GLY HA2 H N N 314 GLY HA3 H N N 315 GLY HXT H N N 316 GOL C1 C N N 317 GOL O1 O N N 318 GOL C2 C N N 319 GOL O2 O N N 320 GOL C3 C N N 321 GOL O3 O N N 322 GOL H11 H N N 323 GOL H12 H N N 324 GOL HO1 H N N 325 GOL H2 H N N 326 GOL HO2 H N N 327 GOL H31 H N N 328 GOL H32 H N N 329 GOL HO3 H N N 330 HIS N N N N 331 HIS CA C N S 332 HIS C C N N 333 HIS O O N N 334 HIS CB C N N 335 HIS CG C Y N 336 HIS ND1 N Y N 337 HIS CD2 C Y N 338 HIS CE1 C Y N 339 HIS NE2 N Y N 340 HIS OXT O N N 341 HIS H H N N 342 HIS H2 H N N 343 HIS HA H N N 344 HIS HB2 H N N 345 HIS HB3 H N N 346 HIS HD1 H N N 347 HIS HD2 H N N 348 HIS HE1 H N N 349 HIS HE2 H N N 350 HIS HXT H N N 351 HOH O O N N 352 HOH H1 H N N 353 HOH H2 H N N 354 ILE N N N N 355 ILE CA C N S 356 ILE C C N N 357 ILE O O N N 358 ILE CB C N S 359 ILE CG1 C N N 360 ILE CG2 C N N 361 ILE CD1 C N N 362 ILE OXT O N N 363 ILE H H N N 364 ILE H2 H N N 365 ILE HA H N N 366 ILE HB H N N 367 ILE HG12 H N N 368 ILE HG13 H N N 369 ILE HG21 H N N 370 ILE HG22 H N N 371 ILE HG23 H N N 372 ILE HD11 H N N 373 ILE HD12 H N N 374 ILE HD13 H N N 375 ILE HXT H N N 376 LEU N N N N 377 LEU CA C N S 378 LEU C C N N 379 LEU O O N N 380 LEU CB C N N 381 LEU CG C N N 382 LEU CD1 C N N 383 LEU CD2 C N N 384 LEU OXT O N N 385 LEU H H N N 386 LEU H2 H N N 387 LEU HA H N N 388 LEU HB2 H N N 389 LEU HB3 H N N 390 LEU HG H N N 391 LEU HD11 H N N 392 LEU HD12 H N N 393 LEU HD13 H N N 394 LEU HD21 H N N 395 LEU HD22 H N N 396 LEU HD23 H N N 397 LEU HXT H N N 398 LYS N N N N 399 LYS CA C N S 400 LYS C C N N 401 LYS O O N N 402 LYS CB C N N 403 LYS CG C N N 404 LYS CD C N N 405 LYS CE C N N 406 LYS NZ N N N 407 LYS OXT O N N 408 LYS H H N N 409 LYS H2 H N N 410 LYS HA H N N 411 LYS HB2 H N N 412 LYS HB3 H N N 413 LYS HG2 H N N 414 LYS HG3 H N N 415 LYS HD2 H N N 416 LYS HD3 H N N 417 LYS HE2 H N N 418 LYS HE3 H N N 419 LYS HZ1 H N N 420 LYS HZ2 H N N 421 LYS HZ3 H N N 422 LYS HXT H N N 423 MET N N N N 424 MET CA C N S 425 MET C C N N 426 MET O O N N 427 MET CB C N N 428 MET CG C N N 429 MET SD S N N 430 MET CE C N N 431 MET OXT O N N 432 MET H H N N 433 MET H2 H N N 434 MET HA H N N 435 MET HB2 H N N 436 MET HB3 H N N 437 MET HG2 H N N 438 MET HG3 H N N 439 MET HE1 H N N 440 MET HE2 H N N 441 MET HE3 H N N 442 MET HXT H N N 443 PHE N N N N 444 PHE CA C N S 445 PHE C C N N 446 PHE O O N N 447 PHE CB C N N 448 PHE CG C Y N 449 PHE CD1 C Y N 450 PHE CD2 C Y N 451 PHE CE1 C Y N 452 PHE CE2 C Y N 453 PHE CZ C Y N 454 PHE OXT O N N 455 PHE H H N N 456 PHE H2 H N N 457 PHE HA H N N 458 PHE HB2 H N N 459 PHE HB3 H N N 460 PHE HD1 H N N 461 PHE HD2 H N N 462 PHE HE1 H N N 463 PHE HE2 H N N 464 PHE HZ H N N 465 PHE HXT H N N 466 PRO N N N N 467 PRO CA C N S 468 PRO C C N N 469 PRO O O N N 470 PRO CB C N N 471 PRO CG C N N 472 PRO CD C N N 473 PRO OXT O N N 474 PRO H H N N 475 PRO HA H N N 476 PRO HB2 H N N 477 PRO HB3 H N N 478 PRO HG2 H N N 479 PRO HG3 H N N 480 PRO HD2 H N N 481 PRO HD3 H N N 482 PRO HXT H N N 483 SER N N N N 484 SER CA C N S 485 SER C C N N 486 SER O O N N 487 SER CB C N N 488 SER OG O N N 489 SER OXT O N N 490 SER H H N N 491 SER H2 H N N 492 SER HA H N N 493 SER HB2 H N N 494 SER HB3 H N N 495 SER HG H N N 496 SER HXT H N N 497 THR N N N N 498 THR CA C N S 499 THR C C N N 500 THR O O N N 501 THR CB C N R 502 THR OG1 O N N 503 THR CG2 C N N 504 THR OXT O N N 505 THR H H N N 506 THR H2 H N N 507 THR HA H N N 508 THR HB H N N 509 THR HG1 H N N 510 THR HG21 H N N 511 THR HG22 H N N 512 THR HG23 H N N 513 THR HXT H N N 514 TRP N N N N 515 TRP CA C N S 516 TRP C C N N 517 TRP O O N N 518 TRP CB C N N 519 TRP CG C Y N 520 TRP CD1 C Y N 521 TRP CD2 C Y N 522 TRP NE1 N Y N 523 TRP CE2 C Y N 524 TRP CE3 C Y N 525 TRP CZ2 C Y N 526 TRP CZ3 C Y N 527 TRP CH2 C Y N 528 TRP OXT O N N 529 TRP H H N N 530 TRP H2 H N N 531 TRP HA H N N 532 TRP HB2 H N N 533 TRP HB3 H N N 534 TRP HD1 H N N 535 TRP HE1 H N N 536 TRP HE3 H N N 537 TRP HZ2 H N N 538 TRP HZ3 H N N 539 TRP HH2 H N N 540 TRP HXT H N N 541 TYR N N N N 542 TYR CA C N S 543 TYR C C N N 544 TYR O O N N 545 TYR CB C N N 546 TYR CG C Y N 547 TYR CD1 C Y N 548 TYR CD2 C Y N 549 TYR CE1 C Y N 550 TYR CE2 C Y N 551 TYR CZ C Y N 552 TYR OH O N N 553 TYR OXT O N N 554 TYR H H N N 555 TYR H2 H N N 556 TYR HA H N N 557 TYR HB2 H N N 558 TYR HB3 H N N 559 TYR HD1 H N N 560 TYR HD2 H N N 561 TYR HE1 H N N 562 TYR HE2 H N N 563 TYR HH H N N 564 TYR HXT H N N 565 VAL N N N N 566 VAL CA C N S 567 VAL C C N N 568 VAL O O N N 569 VAL CB C N N 570 VAL CG1 C N N 571 VAL CG2 C N N 572 VAL OXT O N N 573 VAL H H N N 574 VAL H2 H N N 575 VAL HA H N N 576 VAL HB H N N 577 VAL HG11 H N N 578 VAL HG12 H N N 579 VAL HG13 H N N 580 VAL HG21 H N N 581 VAL HG22 H N N 582 VAL HG23 H N N 583 VAL HXT H N N 584 ZN ZN ZN N N 585 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 ALA N CA sing N N 39 ALA N H sing N N 40 ALA N H2 sing N N 41 ALA CA C sing N N 42 ALA CA CB sing N N 43 ALA CA HA sing N N 44 ALA C O doub N N 45 ALA C OXT sing N N 46 ALA CB HB1 sing N N 47 ALA CB HB2 sing N N 48 ALA CB HB3 sing N N 49 ALA OXT HXT sing N N 50 ARG N CA sing N N 51 ARG N H sing N N 52 ARG N H2 sing N N 53 ARG CA C sing N N 54 ARG CA CB sing N N 55 ARG CA HA sing N N 56 ARG C O doub N N 57 ARG C OXT sing N N 58 ARG CB CG sing N N 59 ARG CB HB2 sing N N 60 ARG CB HB3 sing N N 61 ARG CG CD sing N N 62 ARG CG HG2 sing N N 63 ARG CG HG3 sing N N 64 ARG CD NE sing N N 65 ARG CD HD2 sing N N 66 ARG CD HD3 sing N N 67 ARG NE CZ sing N N 68 ARG NE HE sing N N 69 ARG CZ NH1 sing N N 70 ARG CZ NH2 doub N N 71 ARG NH1 HH11 sing N N 72 ARG NH1 HH12 sing N N 73 ARG NH2 HH21 sing N N 74 ARG NH2 HH22 sing N N 75 ARG OXT HXT sing N N 76 ASN N CA sing N N 77 ASN N H sing N N 78 ASN N H2 sing N N 79 ASN CA C sing N N 80 ASN CA CB sing N N 81 ASN CA HA sing N N 82 ASN C O doub N N 83 ASN C OXT sing N N 84 ASN CB CG sing N N 85 ASN CB HB2 sing N N 86 ASN CB HB3 sing N N 87 ASN CG OD1 doub N N 88 ASN CG ND2 sing N N 89 ASN ND2 HD21 sing N N 90 ASN ND2 HD22 sing N N 91 ASN OXT HXT sing N N 92 ASP N CA sing N N 93 ASP N H sing N N 94 ASP N H2 sing N N 95 ASP CA C sing N N 96 ASP CA CB sing N N 97 ASP CA HA sing N N 98 ASP C O doub N N 99 ASP C OXT sing N N 100 ASP CB CG sing N N 101 ASP CB HB2 sing N N 102 ASP CB HB3 sing N N 103 ASP CG OD1 doub N N 104 ASP CG OD2 sing N N 105 ASP OD2 HD2 sing N N 106 ASP OXT HXT sing N N 107 CYS N CA sing N N 108 CYS N H sing N N 109 CYS N H2 sing N N 110 CYS CA C sing N N 111 CYS CA CB sing N N 112 CYS CA HA sing N N 113 CYS C O doub N N 114 CYS C OXT sing N N 115 CYS CB SG sing N N 116 CYS CB HB2 sing N N 117 CYS CB HB3 sing N N 118 CYS SG HG sing N N 119 CYS OXT HXT sing N N 120 DA OP3 P sing N N 121 DA OP3 HOP3 sing N N 122 DA P OP1 doub N N 123 DA P OP2 sing N N 124 DA P "O5'" sing N N 125 DA OP2 HOP2 sing N N 126 DA "O5'" "C5'" sing N N 127 DA "C5'" "C4'" sing N N 128 DA "C5'" "H5'" sing N N 129 DA "C5'" "H5''" sing N N 130 DA "C4'" "O4'" sing N N 131 DA "C4'" "C3'" sing N N 132 DA "C4'" "H4'" sing N N 133 DA "O4'" "C1'" sing N N 134 DA "C3'" "O3'" sing N N 135 DA "C3'" "C2'" sing N N 136 DA "C3'" "H3'" sing N N 137 DA "O3'" "HO3'" sing N N 138 DA "C2'" "C1'" sing N N 139 DA "C2'" "H2'" sing N N 140 DA "C2'" "H2''" sing N N 141 DA "C1'" N9 sing N N 142 DA "C1'" "H1'" sing N N 143 DA N9 C8 sing Y N 144 DA N9 C4 sing Y N 145 DA C8 N7 doub Y N 146 DA C8 H8 sing N N 147 DA N7 C5 sing Y N 148 DA C5 C6 sing Y N 149 DA C5 C4 doub Y N 150 DA C6 N6 sing N N 151 DA C6 N1 doub Y N 152 DA N6 H61 sing N N 153 DA N6 H62 sing N N 154 DA N1 C2 sing Y N 155 DA C2 N3 doub Y N 156 DA C2 H2 sing N N 157 DA N3 C4 sing Y N 158 DC OP3 P sing N N 159 DC OP3 HOP3 sing N N 160 DC P OP1 doub N N 161 DC P OP2 sing N N 162 DC P "O5'" sing N N 163 DC OP2 HOP2 sing N N 164 DC "O5'" "C5'" sing N N 165 DC "C5'" "C4'" sing N N 166 DC "C5'" "H5'" sing N N 167 DC "C5'" "H5''" sing N N 168 DC "C4'" "O4'" sing N N 169 DC "C4'" "C3'" sing N N 170 DC "C4'" "H4'" sing N N 171 DC "O4'" "C1'" sing N N 172 DC "C3'" "O3'" sing N N 173 DC "C3'" "C2'" sing N N 174 DC "C3'" "H3'" sing N N 175 DC "O3'" "HO3'" sing N N 176 DC "C2'" "C1'" sing N N 177 DC "C2'" "H2'" sing N N 178 DC "C2'" "H2''" sing N N 179 DC "C1'" N1 sing N N 180 DC "C1'" "H1'" sing N N 181 DC N1 C2 sing N N 182 DC N1 C6 sing N N 183 DC C2 O2 doub N N 184 DC C2 N3 sing N N 185 DC N3 C4 doub N N 186 DC C4 N4 sing N N 187 DC C4 C5 sing N N 188 DC N4 H41 sing N N 189 DC N4 H42 sing N N 190 DC C5 C6 doub N N 191 DC C5 H5 sing N N 192 DC C6 H6 sing N N 193 DG OP3 P sing N N 194 DG OP3 HOP3 sing N N 195 DG P OP1 doub N N 196 DG P OP2 sing N N 197 DG P "O5'" sing N N 198 DG OP2 HOP2 sing N N 199 DG "O5'" "C5'" sing N N 200 DG "C5'" "C4'" sing N N 201 DG "C5'" "H5'" sing N N 202 DG "C5'" "H5''" sing N N 203 DG "C4'" "O4'" sing N N 204 DG "C4'" "C3'" sing N N 205 DG "C4'" "H4'" sing N N 206 DG "O4'" "C1'" sing N N 207 DG "C3'" "O3'" sing N N 208 DG "C3'" "C2'" sing N N 209 DG "C3'" "H3'" sing N N 210 DG "O3'" "HO3'" sing N N 211 DG "C2'" "C1'" sing N N 212 DG "C2'" "H2'" sing N N 213 DG "C2'" "H2''" sing N N 214 DG "C1'" N9 sing N N 215 DG "C1'" "H1'" sing N N 216 DG N9 C8 sing Y N 217 DG N9 C4 sing Y N 218 DG C8 N7 doub Y N 219 DG C8 H8 sing N N 220 DG N7 C5 sing Y N 221 DG C5 C6 sing N N 222 DG C5 C4 doub Y N 223 DG C6 O6 doub N N 224 DG C6 N1 sing N N 225 DG N1 C2 sing N N 226 DG N1 H1 sing N N 227 DG C2 N2 sing N N 228 DG C2 N3 doub N N 229 DG N2 H21 sing N N 230 DG N2 H22 sing N N 231 DG N3 C4 sing N N 232 DT OP3 P sing N N 233 DT OP3 HOP3 sing N N 234 DT P OP1 doub N N 235 DT P OP2 sing N N 236 DT P "O5'" sing N N 237 DT OP2 HOP2 sing N N 238 DT "O5'" "C5'" sing N N 239 DT "C5'" "C4'" sing N N 240 DT "C5'" "H5'" sing N N 241 DT "C5'" "H5''" sing N N 242 DT "C4'" "O4'" sing N N 243 DT "C4'" "C3'" sing N N 244 DT "C4'" "H4'" sing N N 245 DT "O4'" "C1'" sing N N 246 DT "C3'" "O3'" sing N N 247 DT "C3'" "C2'" sing N N 248 DT "C3'" "H3'" sing N N 249 DT "O3'" "HO3'" sing N N 250 DT "C2'" "C1'" sing N N 251 DT "C2'" "H2'" sing N N 252 DT "C2'" "H2''" sing N N 253 DT "C1'" N1 sing N N 254 DT "C1'" "H1'" sing N N 255 DT N1 C2 sing N N 256 DT N1 C6 sing N N 257 DT C2 O2 doub N N 258 DT C2 N3 sing N N 259 DT N3 C4 sing N N 260 DT N3 H3 sing N N 261 DT C4 O4 doub N N 262 DT C4 C5 sing N N 263 DT C5 C7 sing N N 264 DT C5 C6 doub N N 265 DT C7 H71 sing N N 266 DT C7 H72 sing N N 267 DT C7 H73 sing N N 268 DT C6 H6 sing N N 269 GLN N CA sing N N 270 GLN N H sing N N 271 GLN N H2 sing N N 272 GLN CA C sing N N 273 GLN CA CB sing N N 274 GLN CA HA sing N N 275 GLN C O doub N N 276 GLN C OXT sing N N 277 GLN CB CG sing N N 278 GLN CB HB2 sing N N 279 GLN CB HB3 sing N N 280 GLN CG CD sing N N 281 GLN CG HG2 sing N N 282 GLN CG HG3 sing N N 283 GLN CD OE1 doub N N 284 GLN CD NE2 sing N N 285 GLN NE2 HE21 sing N N 286 GLN NE2 HE22 sing N N 287 GLN OXT HXT sing N N 288 GLU N CA sing N N 289 GLU N H sing N N 290 GLU N H2 sing N N 291 GLU CA C sing N N 292 GLU CA CB sing N N 293 GLU CA HA sing N N 294 GLU C O doub N N 295 GLU C OXT sing N N 296 GLU CB CG sing N N 297 GLU CB HB2 sing N N 298 GLU CB HB3 sing N N 299 GLU CG CD sing N N 300 GLU CG HG2 sing N N 301 GLU CG HG3 sing N N 302 GLU CD OE1 doub N N 303 GLU CD OE2 sing N N 304 GLU OE2 HE2 sing N N 305 GLU OXT HXT sing N N 306 GLY N CA sing N N 307 GLY N H sing N N 308 GLY N H2 sing N N 309 GLY CA C sing N N 310 GLY CA HA2 sing N N 311 GLY CA HA3 sing N N 312 GLY C O doub N N 313 GLY C OXT sing N N 314 GLY OXT HXT sing N N 315 GOL C1 O1 sing N N 316 GOL C1 C2 sing N N 317 GOL C1 H11 sing N N 318 GOL C1 H12 sing N N 319 GOL O1 HO1 sing N N 320 GOL C2 O2 sing N N 321 GOL C2 C3 sing N N 322 GOL C2 H2 sing N N 323 GOL O2 HO2 sing N N 324 GOL C3 O3 sing N N 325 GOL C3 H31 sing N N 326 GOL C3 H32 sing N N 327 GOL O3 HO3 sing N N 328 HIS N CA sing N N 329 HIS N H sing N N 330 HIS N H2 sing N N 331 HIS CA C sing N N 332 HIS CA CB sing N N 333 HIS CA HA sing N N 334 HIS C O doub N N 335 HIS C OXT sing N N 336 HIS CB CG sing N N 337 HIS CB HB2 sing N N 338 HIS CB HB3 sing N N 339 HIS CG ND1 sing Y N 340 HIS CG CD2 doub Y N 341 HIS ND1 CE1 doub Y N 342 HIS ND1 HD1 sing N N 343 HIS CD2 NE2 sing Y N 344 HIS CD2 HD2 sing N N 345 HIS CE1 NE2 sing Y N 346 HIS CE1 HE1 sing N N 347 HIS NE2 HE2 sing N N 348 HIS OXT HXT sing N N 349 HOH O H1 sing N N 350 HOH O H2 sing N N 351 ILE N CA sing N N 352 ILE N H sing N N 353 ILE N H2 sing N N 354 ILE CA C sing N N 355 ILE CA CB sing N N 356 ILE CA HA sing N N 357 ILE C O doub N N 358 ILE C OXT sing N N 359 ILE CB CG1 sing N N 360 ILE CB CG2 sing N N 361 ILE CB HB sing N N 362 ILE CG1 CD1 sing N N 363 ILE CG1 HG12 sing N N 364 ILE CG1 HG13 sing N N 365 ILE CG2 HG21 sing N N 366 ILE CG2 HG22 sing N N 367 ILE CG2 HG23 sing N N 368 ILE CD1 HD11 sing N N 369 ILE CD1 HD12 sing N N 370 ILE CD1 HD13 sing N N 371 ILE OXT HXT sing N N 372 LEU N CA sing N N 373 LEU N H sing N N 374 LEU N H2 sing N N 375 LEU CA C sing N N 376 LEU CA CB sing N N 377 LEU CA HA sing N N 378 LEU C O doub N N 379 LEU C OXT sing N N 380 LEU CB CG sing N N 381 LEU CB HB2 sing N N 382 LEU CB HB3 sing N N 383 LEU CG CD1 sing N N 384 LEU CG CD2 sing N N 385 LEU CG HG sing N N 386 LEU CD1 HD11 sing N N 387 LEU CD1 HD12 sing N N 388 LEU CD1 HD13 sing N N 389 LEU CD2 HD21 sing N N 390 LEU CD2 HD22 sing N N 391 LEU CD2 HD23 sing N N 392 LEU OXT HXT sing N N 393 LYS N CA sing N N 394 LYS N H sing N N 395 LYS N H2 sing N N 396 LYS CA C sing N N 397 LYS CA CB sing N N 398 LYS CA HA sing N N 399 LYS C O doub N N 400 LYS C OXT sing N N 401 LYS CB CG sing N N 402 LYS CB HB2 sing N N 403 LYS CB HB3 sing N N 404 LYS CG CD sing N N 405 LYS CG HG2 sing N N 406 LYS CG HG3 sing N N 407 LYS CD CE sing N N 408 LYS CD HD2 sing N N 409 LYS CD HD3 sing N N 410 LYS CE NZ sing N N 411 LYS CE HE2 sing N N 412 LYS CE HE3 sing N N 413 LYS NZ HZ1 sing N N 414 LYS NZ HZ2 sing N N 415 LYS NZ HZ3 sing N N 416 LYS OXT HXT sing N N 417 MET N CA sing N N 418 MET N H sing N N 419 MET N H2 sing N N 420 MET CA C sing N N 421 MET CA CB sing N N 422 MET CA HA sing N N 423 MET C O doub N N 424 MET C OXT sing N N 425 MET CB CG sing N N 426 MET CB HB2 sing N N 427 MET CB HB3 sing N N 428 MET CG SD sing N N 429 MET CG HG2 sing N N 430 MET CG HG3 sing N N 431 MET SD CE sing N N 432 MET CE HE1 sing N N 433 MET CE HE2 sing N N 434 MET CE HE3 sing N N 435 MET OXT HXT sing N N 436 PHE N CA sing N N 437 PHE N H sing N N 438 PHE N H2 sing N N 439 PHE CA C sing N N 440 PHE CA CB sing N N 441 PHE CA HA sing N N 442 PHE C O doub N N 443 PHE C OXT sing N N 444 PHE CB CG sing N N 445 PHE CB HB2 sing N N 446 PHE CB HB3 sing N N 447 PHE CG CD1 doub Y N 448 PHE CG CD2 sing Y N 449 PHE CD1 CE1 sing Y N 450 PHE CD1 HD1 sing N N 451 PHE CD2 CE2 doub Y N 452 PHE CD2 HD2 sing N N 453 PHE CE1 CZ doub Y N 454 PHE CE1 HE1 sing N N 455 PHE CE2 CZ sing Y N 456 PHE CE2 HE2 sing N N 457 PHE CZ HZ sing N N 458 PHE OXT HXT sing N N 459 PRO N CA sing N N 460 PRO N CD sing N N 461 PRO N H sing N N 462 PRO CA C sing N N 463 PRO CA CB sing N N 464 PRO CA HA sing N N 465 PRO C O doub N N 466 PRO C OXT sing N N 467 PRO CB CG sing N N 468 PRO CB HB2 sing N N 469 PRO CB HB3 sing N N 470 PRO CG CD sing N N 471 PRO CG HG2 sing N N 472 PRO CG HG3 sing N N 473 PRO CD HD2 sing N N 474 PRO CD HD3 sing N N 475 PRO OXT HXT sing N N 476 SER N CA sing N N 477 SER N H sing N N 478 SER N H2 sing N N 479 SER CA C sing N N 480 SER CA CB sing N N 481 SER CA HA sing N N 482 SER C O doub N N 483 SER C OXT sing N N 484 SER CB OG sing N N 485 SER CB HB2 sing N N 486 SER CB HB3 sing N N 487 SER OG HG sing N N 488 SER OXT HXT sing N N 489 THR N CA sing N N 490 THR N H sing N N 491 THR N H2 sing N N 492 THR CA C sing N N 493 THR CA CB sing N N 494 THR CA HA sing N N 495 THR C O doub N N 496 THR C OXT sing N N 497 THR CB OG1 sing N N 498 THR CB CG2 sing N N 499 THR CB HB sing N N 500 THR OG1 HG1 sing N N 501 THR CG2 HG21 sing N N 502 THR CG2 HG22 sing N N 503 THR CG2 HG23 sing N N 504 THR OXT HXT sing N N 505 TRP N CA sing N N 506 TRP N H sing N N 507 TRP N H2 sing N N 508 TRP CA C sing N N 509 TRP CA CB sing N N 510 TRP CA HA sing N N 511 TRP C O doub N N 512 TRP C OXT sing N N 513 TRP CB CG sing N N 514 TRP CB HB2 sing N N 515 TRP CB HB3 sing N N 516 TRP CG CD1 doub Y N 517 TRP CG CD2 sing Y N 518 TRP CD1 NE1 sing Y N 519 TRP CD1 HD1 sing N N 520 TRP CD2 CE2 doub Y N 521 TRP CD2 CE3 sing Y N 522 TRP NE1 CE2 sing Y N 523 TRP NE1 HE1 sing N N 524 TRP CE2 CZ2 sing Y N 525 TRP CE3 CZ3 doub Y N 526 TRP CE3 HE3 sing N N 527 TRP CZ2 CH2 doub Y N 528 TRP CZ2 HZ2 sing N N 529 TRP CZ3 CH2 sing Y N 530 TRP CZ3 HZ3 sing N N 531 TRP CH2 HH2 sing N N 532 TRP OXT HXT sing N N 533 TYR N CA sing N N 534 TYR N H sing N N 535 TYR N H2 sing N N 536 TYR CA C sing N N 537 TYR CA CB sing N N 538 TYR CA HA sing N N 539 TYR C O doub N N 540 TYR C OXT sing N N 541 TYR CB CG sing N N 542 TYR CB HB2 sing N N 543 TYR CB HB3 sing N N 544 TYR CG CD1 doub Y N 545 TYR CG CD2 sing Y N 546 TYR CD1 CE1 sing Y N 547 TYR CD1 HD1 sing N N 548 TYR CD2 CE2 doub Y N 549 TYR CD2 HD2 sing N N 550 TYR CE1 CZ doub Y N 551 TYR CE1 HE1 sing N N 552 TYR CE2 CZ sing Y N 553 TYR CE2 HE2 sing N N 554 TYR CZ OH sing N N 555 TYR OH HH sing N N 556 TYR OXT HXT sing N N 557 VAL N CA sing N N 558 VAL N H sing N N 559 VAL N H2 sing N N 560 VAL CA C sing N N 561 VAL CA CB sing N N 562 VAL CA HA sing N N 563 VAL C O doub N N 564 VAL C OXT sing N N 565 VAL CB CG1 sing N N 566 VAL CB CG2 sing N N 567 VAL CB HB sing N N 568 VAL CG1 HG11 sing N N 569 VAL CG1 HG12 sing N N 570 VAL CG1 HG13 sing N N 571 VAL CG2 HG21 sing N N 572 VAL CG2 HG22 sing N N 573 VAL CG2 HG23 sing N N 574 VAL OXT HXT sing N N 575 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4F6N 'double helix' 4F6N 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 19 1_555 -0.029 -0.030 0.399 -2.347 -7.952 -0.711 1 D_DG1:DC38_E D 1 ? E 38 ? 19 1 1 B DT 2 1_555 C DA 18 1_555 0.209 -0.041 0.243 -2.376 -8.501 -1.507 2 D_DT2:DA37_E D 2 ? E 37 ? 20 1 1 B DG 3 1_555 C DC 17 1_555 -0.080 0.006 -0.024 -3.906 -12.451 1.275 3 D_DG3:DC36_E D 3 ? E 36 ? 19 1 1 B DT 4 1_555 C DA 16 1_555 0.176 -0.067 0.174 -4.873 -15.841 -2.183 4 D_DT4:DA35_E D 4 ? E 35 ? 20 1 1 B DC 5 1_555 C DG 15 1_555 0.070 -0.059 -0.070 -4.670 -5.979 -0.903 5 D_DC5:DG34_E D 5 ? E 34 ? 19 1 1 B DA 6 1_555 C DT 14 1_555 -0.195 -0.035 0.064 -10.270 -13.609 -3.507 6 D_DA6:DT33_E D 6 ? E 33 ? 20 1 1 B DC 7 1_555 C DG 13 1_555 -0.307 0.010 0.001 -9.590 -3.311 0.570 7 D_DC7:DG32_E D 7 ? E 32 ? 19 1 1 B 5CM 8 1_555 C DG 12 1_555 0.091 -0.056 -0.129 2.707 -4.026 0.331 8 D_5CM8:DG31_E D 8 ? E 31 ? 19 1 1 B DG 9 1_555 C 5CM 11 1_555 0.215 0.021 0.150 2.434 -14.035 -0.903 9 D_DG9:5CM30_E D 9 ? E 30 ? 19 1 1 B 5CM 10 1_555 C DG 10 1_555 0.351 -0.165 0.236 1.428 -14.010 -2.185 10 D_5CM10:DG29_E D 10 ? E 29 ? 19 1 1 B DG 11 1_555 C 5CM 9 1_555 -0.625 -0.106 -0.174 -6.325 -7.388 1.101 11 D_DG11:5CM28_E D 11 ? E 28 ? 19 1 1 B DT 12 1_555 C DA 8 1_555 -0.046 -0.045 0.401 5.952 -9.784 -1.726 12 D_DT12:DA27_E D 12 ? E 27 ? 20 1 1 B DC 13 1_555 C DG 7 1_555 0.366 -0.080 0.310 -3.527 -16.114 -0.635 13 D_DC13:DG26_E D 13 ? E 26 ? 19 1 1 B DT 14 1_555 C DA 6 1_555 0.452 -0.087 -0.089 1.330 -5.094 3.122 14 D_DT14:DA25_E D 14 ? E 25 ? 20 1 1 B DA 15 1_555 C DT 5 1_555 0.940 -0.032 0.132 -5.069 -3.283 0.519 15 D_DA15:DT24_E D 15 ? E 24 ? 20 1 1 B DT 16 1_555 C DA 4 1_555 0.269 -0.046 0.184 0.290 -2.824 0.237 16 D_DT16:DA23_E D 16 ? E 23 ? 20 1 1 B DA 17 1_555 C DT 3 1_555 0.381 0.015 -0.477 -4.650 -2.020 -1.501 17 D_DA17:DT22_E D 17 ? E 22 ? 20 1 1 B DC 18 1_555 C DG 2 1_555 -0.937 -0.014 0.066 12.827 -11.611 -0.273 18 D_DC18:DG21_E D 18 ? E 21 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 19 1_555 B DT 2 1_555 C DA 18 1_555 -0.206 -0.007 3.295 2.235 0.794 32.132 -0.155 0.771 3.272 1.431 -4.031 32.217 1 DD_DG1DT2:DA37DC38_EE D 1 ? E 38 ? D 2 ? E 37 ? 1 B DT 2 1_555 C DA 18 1_555 B DG 3 1_555 C DC 17 1_555 0.187 2.515 3.331 1.840 -7.511 49.449 3.500 -0.093 2.949 -8.915 -2.184 50.012 2 DD_DT2DG3:DC36DA37_EE D 2 ? E 37 ? D 3 ? E 36 ? 1 B DG 3 1_555 C DC 17 1_555 B DT 4 1_555 C DA 16 1_555 -0.854 0.667 3.286 -3.389 -0.386 35.977 1.131 0.892 3.343 -0.623 5.472 36.133 3 DD_DG3DT4:DA35DC36_EE D 3 ? E 36 ? D 4 ? E 35 ? 1 B DT 4 1_555 C DA 16 1_555 B DC 5 1_555 C DG 15 1_555 0.779 1.730 3.289 3.228 -3.325 42.077 2.735 -0.751 3.198 -4.614 -4.479 42.320 4 DD_DT4DC5:DG34DA35_EE D 4 ? E 35 ? D 5 ? E 34 ? 1 B DC 5 1_555 C DG 15 1_555 B DA 6 1_555 C DT 14 1_555 -0.867 2.281 3.408 -4.394 -2.322 43.950 3.255 0.726 3.357 -3.090 5.849 44.216 5 DD_DC5DA6:DT33DG34_EE D 5 ? E 34 ? D 6 ? E 33 ? 1 B DA 6 1_555 C DT 14 1_555 B DC 7 1_555 C DG 13 1_555 0.673 0.798 3.407 -2.330 -3.519 35.500 1.819 -1.440 3.266 -5.747 3.805 35.742 6 DD_DA6DC7:DG32DT33_EE D 6 ? E 33 ? D 7 ? E 32 ? 1 B DC 7 1_555 C DG 13 1_555 B 5CM 8 1_555 C DG 12 1_555 -0.616 0.897 3.152 2.138 7.736 25.742 -0.047 1.868 3.219 16.850 -4.657 26.944 7 DD_DC75CM8:DG31DG32_EE D 7 ? E 32 ? D 8 ? E 31 ? 1 B 5CM 8 1_555 C DG 12 1_555 B DG 9 1_555 C 5CM 11 1_555 -0.637 1.178 3.460 -4.760 4.771 43.568 1.083 0.362 3.610 6.382 6.367 44.061 8 DD_5CM8DG9:5CM30DG31_EE D 8 ? E 31 ? D 9 ? E 30 ? 1 B DG 9 1_555 C 5CM 11 1_555 B 5CM 10 1_555 C DG 10 1_555 0.423 -0.469 3.302 0.362 -1.659 30.266 -0.557 -0.736 3.327 -3.175 -0.692 30.312 9 DD_DG95CM10:DG295CM30_EE D 9 ? E 30 ? D 10 ? E 29 ? 1 B 5CM 10 1_555 C DG 10 1_555 B DG 11 1_555 C 5CM 9 1_555 1.090 0.222 3.341 8.796 7.659 34.385 -0.795 -0.430 3.476 12.518 -14.376 36.252 10 DD_5CM10DG11:5CM28DG29_EE D 10 ? E 29 ? D 11 ? E 28 ? 1 B DG 11 1_555 C 5CM 9 1_555 B DT 12 1_555 C DA 8 1_555 -0.517 -0.026 3.092 -5.669 -0.873 31.170 0.106 -0.055 3.134 -1.608 10.439 31.681 11 DD_DG11DT12:DA275CM28_EE D 11 ? E 28 ? D 12 ? E 27 ? 1 B DT 12 1_555 C DA 8 1_555 B DC 13 1_555 C DG 7 1_555 -0.008 -0.285 3.401 -0.330 -1.426 39.528 -0.246 -0.028 3.409 -2.107 0.488 39.554 12 DD_DT12DC13:DG26DA27_EE D 12 ? E 27 ? D 13 ? E 26 ? 1 B DC 13 1_555 C DG 7 1_555 B DT 14 1_555 C DA 6 1_555 0.018 -0.141 3.192 3.894 5.563 35.364 -0.998 0.511 3.119 9.055 -6.338 35.990 13 DD_DC13DT14:DA25DG26_EE D 13 ? E 26 ? D 14 ? E 25 ? 1 B DT 14 1_555 C DA 6 1_555 B DA 15 1_555 C DT 5 1_555 -0.117 -0.314 3.380 -1.211 7.178 41.773 -1.185 0.035 3.287 9.976 1.683 42.375 14 DD_DT14DA15:DT24DA25_EE D 14 ? E 25 ? D 15 ? E 24 ? 1 B DA 15 1_555 C DT 5 1_555 B DT 16 1_555 C DA 4 1_555 -0.535 -0.305 3.194 -0.429 -1.620 27.721 -0.254 1.014 3.214 -3.377 0.894 27.770 15 DD_DA15DT16:DA23DT24_EE D 15 ? E 24 ? D 16 ? E 23 ? 1 B DT 16 1_555 C DA 4 1_555 B DA 17 1_555 C DT 3 1_555 0.199 -0.779 3.397 5.816 6.354 33.014 -2.362 0.606 3.184 10.951 -10.023 34.089 16 DD_DT16DA17:DT22DA23_EE D 16 ? E 23 ? D 17 ? E 22 ? 1 B DA 17 1_555 C DT 3 1_555 B DC 18 1_555 C DG 2 1_555 1.073 -0.640 2.923 -8.064 1.880 20.660 -2.244 -5.287 2.279 4.990 21.409 22.241 17 DD_DA17DC18:DG21DT22_EE D 17 ? E 22 ? D 18 ? E 21 ? # _pdbx_initial_refinement_model.accession_code 4F6M _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details 'Kaiso from complex with Kaiso binding site protein' # _atom_sites.entry_id 4F6N _atom_sites.fract_transf_matrix[1][1] 0.022702 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005453 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004345 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_