data_4F7H # _entry.id 4F7H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4F7H pdb_00004f7h 10.2210/pdb4f7h/pdb RCSB RCSB072551 ? ? WWPDB D_1000072551 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2LKO _pdbx_database_related.details 'the solution structure of the same domain in complex with IP4' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4F7H _pdbx_database_status.recvd_initial_deposition_date 2012-05-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, Y.' 1 'Zhu, Y.' 2 'Qin, J.' 3 'Ye, S.' 4 'Zhang, R.' 5 # _citation.id primary _citation.title ;Crystal structure of kindlin-2 PH domain reveals a conformational transition for its membrane anchoring and regulation of integrin activation. ; _citation.journal_abbrev 'Protein Cell' _citation.journal_volume 3 _citation.page_first 434 _citation.page_last 440 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country CN _citation.journal_id_ISSN 1674-800X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22653426 _citation.pdbx_database_id_DOI 10.1007/s13238-012-2046-1 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, Y.' 1 ? primary 'Zhu, Y.' 2 ? primary 'Ye, S.' 3 ? primary 'Zhang, R.' 4 ? # _cell.entry_id 4F7H _cell.length_a 58.474 _cell.length_b 58.474 _cell.length_c 92.249 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F7H _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Fermitin family homolog 2' 19433.139 1 ? ? 'pleckstrin homology domain, UNP residues 328-499' ? 2 non-polymer syn 'S,R MESO-TARTARIC ACID' 150.087 2 ? ? ? ? 3 water nat water 18.015 86 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Kindlin-2, Mitogen-inducible gene 2 protein, MIG-2, Pleckstrin homology domain-containing family C member 1, PH domain-containing family C member 1 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SSIMTSENHLNNSDKEVDEVDAALSDLEITLEGGKTSTILGDITSIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISC YKSKEESSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKGKTMADSSYN LEVQNILSFLKMQ ; _entity_poly.pdbx_seq_one_letter_code_can ;SSIMTSENHLNNSDKEVDEVDAALSDLEITLEGGKTSTILGDITSIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISC YKSKEESSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKGKTMADSSYN LEVQNILSFLKMQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 SER n 1 3 ILE n 1 4 MET n 1 5 THR n 1 6 SER n 1 7 GLU n 1 8 ASN n 1 9 HIS n 1 10 LEU n 1 11 ASN n 1 12 ASN n 1 13 SER n 1 14 ASP n 1 15 LYS n 1 16 GLU n 1 17 VAL n 1 18 ASP n 1 19 GLU n 1 20 VAL n 1 21 ASP n 1 22 ALA n 1 23 ALA n 1 24 LEU n 1 25 SER n 1 26 ASP n 1 27 LEU n 1 28 GLU n 1 29 ILE n 1 30 THR n 1 31 LEU n 1 32 GLU n 1 33 GLY n 1 34 GLY n 1 35 LYS n 1 36 THR n 1 37 SER n 1 38 THR n 1 39 ILE n 1 40 LEU n 1 41 GLY n 1 42 ASP n 1 43 ILE n 1 44 THR n 1 45 SER n 1 46 ILE n 1 47 PRO n 1 48 GLU n 1 49 LEU n 1 50 ALA n 1 51 ASP n 1 52 TYR n 1 53 ILE n 1 54 LYS n 1 55 VAL n 1 56 PHE n 1 57 LYS n 1 58 PRO n 1 59 LYS n 1 60 LYS n 1 61 LEU n 1 62 THR n 1 63 LEU n 1 64 LYS n 1 65 GLY n 1 66 TYR n 1 67 LYS n 1 68 GLN n 1 69 TYR n 1 70 TRP n 1 71 CYS n 1 72 THR n 1 73 PHE n 1 74 LYS n 1 75 ASP n 1 76 THR n 1 77 SER n 1 78 ILE n 1 79 SER n 1 80 CYS n 1 81 TYR n 1 82 LYS n 1 83 SER n 1 84 LYS n 1 85 GLU n 1 86 GLU n 1 87 SER n 1 88 SER n 1 89 GLY n 1 90 THR n 1 91 PRO n 1 92 ALA n 1 93 HIS n 1 94 GLN n 1 95 MET n 1 96 ASN n 1 97 LEU n 1 98 ARG n 1 99 GLY n 1 100 CYS n 1 101 GLU n 1 102 VAL n 1 103 THR n 1 104 PRO n 1 105 ASP n 1 106 VAL n 1 107 ASN n 1 108 ILE n 1 109 SER n 1 110 GLY n 1 111 GLN n 1 112 LYS n 1 113 PHE n 1 114 ASN n 1 115 ILE n 1 116 LYS n 1 117 LEU n 1 118 LEU n 1 119 ILE n 1 120 PRO n 1 121 VAL n 1 122 ALA n 1 123 GLU n 1 124 GLY n 1 125 MET n 1 126 ASN n 1 127 GLU n 1 128 ILE n 1 129 TRP n 1 130 LEU n 1 131 ARG n 1 132 CYS n 1 133 ASP n 1 134 ASN n 1 135 GLU n 1 136 LYS n 1 137 GLN n 1 138 TYR n 1 139 ALA n 1 140 HIS n 1 141 TRP n 1 142 MET n 1 143 ALA n 1 144 ALA n 1 145 CYS n 1 146 ARG n 1 147 LEU n 1 148 ALA n 1 149 SER n 1 150 LYS n 1 151 GLY n 1 152 LYS n 1 153 THR n 1 154 MET n 1 155 ALA n 1 156 ASP n 1 157 SER n 1 158 SER n 1 159 TYR n 1 160 ASN n 1 161 LEU n 1 162 GLU n 1 163 VAL n 1 164 GLN n 1 165 ASN n 1 166 ILE n 1 167 LEU n 1 168 SER n 1 169 PHE n 1 170 LEU n 1 171 LYS n 1 172 MET n 1 173 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'FERMT2, KIND2, MIG2, PLEKHC1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FERM2_HUMAN _struct_ref.pdbx_db_accession Q96AC1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SIMTSENHLNNSDKEVDEVDAALSDLEITLEGGKTSTILGDITSIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCY KSKEESSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKGKTMADSSYNL EVQNILSFLKMQ ; _struct_ref.pdbx_align_begin 328 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4F7H _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 173 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q96AC1 _struct_ref_seq.db_align_beg 328 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 499 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 328 _struct_ref_seq.pdbx_auth_seq_align_end 499 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4F7H _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q96AC1 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 327 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SRT non-polymer . 'S,R MESO-TARTARIC ACID' ? 'C4 H6 O6' 150.087 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4F7H _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.03 _exptl_crystal.density_percent_sol 39.37 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '1.4 M ammonium tartrate dibasic, 0.1 M tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944+' _diffrn_detector.pdbx_collection_date 2012-05-07 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Ni Filter' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 4F7H _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 29.237 _reflns.d_resolution_high 1.9 _reflns.number_obs 13245 _reflns.number_all 13258 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 1.94 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 6.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 848 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4F7H _refine.ls_number_reflns_obs 13195 _refine.ls_number_reflns_all 13258 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.237 _refine.ls_d_res_high 1.900 _refine.ls_percent_reflns_obs 99.96 _refine.ls_R_factor_obs 0.1964 _refine.ls_R_factor_all 0.197 _refine.ls_R_factor_R_work 0.1950 _refine.ls_R_factor_R_free 0.2241 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.94 _refine.ls_number_reflns_R_free 652 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 2.2800 _refine.aniso_B[2][2] 2.2800 _refine.aniso_B[3][3] -4.5599 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.381 _refine.solvent_model_param_bsol 45.960 _refine.pdbx_solvent_vdw_probe_radii 0.90 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.60 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 2YS3 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.24 _refine.pdbx_overall_phase_error 21.40 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1076 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 1182 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 29.237 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.013 ? ? 1116 ? 'X-RAY DIFFRACTION' f_angle_d 1.486 ? ? 1503 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 17.150 ? ? 422 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.098 ? ? 166 ? 'X-RAY DIFFRACTION' f_plane_restr 0.006 ? ? 189 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.8997 2.0464 2417 0.2465 100.00 0.2886 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.0464 2.2522 2475 0.2007 100.00 0.2258 . . 135 . . . . 'X-RAY DIFFRACTION' . 2.2522 2.5780 2465 0.2009 100.00 0.2593 . . 125 . . . . 'X-RAY DIFFRACTION' . 2.5780 3.2473 2506 0.1950 100.00 0.2255 . . 136 . . . . 'X-RAY DIFFRACTION' . 3.2473 29.2404 2680 0.1838 100.00 0.1978 . . 118 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4F7H _struct.title 'The crystal structure of kindlin-2 pleckstrin homology domain in free form' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4F7H _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'beta-barrel, membrane binding, integrin activation, cytoplasmic membrane, CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 42 ? ILE A 46 ? ASP A 368 ILE A 372 5 ? 5 HELX_P HELX_P2 2 SER A 83 ? SER A 87 ? SER A 409 SER A 413 5 ? 5 HELX_P HELX_P3 3 ASN A 134 ? LYS A 150 ? ASN A 460 LYS A 476 1 ? 17 HELX_P HELX_P4 4 SER A 157 ? LEU A 170 ? SER A 483 LEU A 496 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ILE _struct_mon_prot_cis.label_seq_id 46 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ILE _struct_mon_prot_cis.auth_seq_id 372 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 47 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 373 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.91 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 93 ? ASN A 96 ? HIS A 419 ASN A 422 A 2 SER A 77 ? TYR A 81 ? SER A 403 TYR A 407 A 3 LYS A 67 ? LYS A 74 ? LYS A 393 LYS A 400 A 4 LEU A 49 ? PHE A 56 ? LEU A 375 PHE A 382 A 5 GLY A 124 ? CYS A 132 ? GLY A 450 CYS A 458 A 6 LYS A 112 ? VAL A 121 ? LYS A 438 VAL A 447 A 7 GLU A 101 ? ASN A 107 ? GLU A 427 ASN A 433 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 93 ? O HIS A 419 N CYS A 80 ? N CYS A 406 A 2 3 O TYR A 81 ? O TYR A 407 N TRP A 70 ? N TRP A 396 A 3 4 O CYS A 71 ? O CYS A 397 N ASP A 51 ? N ASP A 377 A 4 5 N LYS A 54 ? N LYS A 380 O ARG A 131 ? O ARG A 457 A 5 6 O LEU A 130 ? O LEU A 456 N ILE A 115 ? N ILE A 441 A 6 7 O LYS A 112 ? O LYS A 438 N ASN A 107 ? N ASN A 433 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SRT 601 ? 11 'BINDING SITE FOR RESIDUE SRT A 601' AC2 Software A SRT 602 ? 9 'BINDING SITE FOR RESIDUE SRT A 602' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 ASP A 75 ? ASP A 401 . ? 3_544 ? 2 AC1 11 THR A 76 ? THR A 402 . ? 3_544 ? 3 AC1 11 SER A 77 ? SER A 403 . ? 3_544 ? 4 AC1 11 LYS A 84 ? LYS A 410 . ? 1_555 ? 5 AC1 11 GLU A 85 ? GLU A 411 . ? 1_555 ? 6 AC1 11 GLU A 86 ? GLU A 412 . ? 1_555 ? 7 AC1 11 SER A 87 ? SER A 413 . ? 1_555 ? 8 AC1 11 SER A 88 ? SER A 414 . ? 1_555 ? 9 AC1 11 ASN A 96 ? ASN A 422 . ? 3_544 ? 10 AC1 11 ARG A 98 ? ARG A 424 . ? 3_544 ? 11 AC1 11 HOH D . ? HOH A 741 . ? 3_544 ? 12 AC2 9 LYS A 74 ? LYS A 400 . ? 4_555 ? 13 AC2 9 LYS A 150 ? LYS A 476 . ? 1_555 ? 14 AC2 9 GLY A 151 ? GLY A 477 . ? 1_555 ? 15 AC2 9 LYS A 152 ? LYS A 478 . ? 1_555 ? 16 AC2 9 HOH D . ? HOH A 724 . ? 4_555 ? 17 AC2 9 HOH D . ? HOH A 729 . ? 4_555 ? 18 AC2 9 HOH D . ? HOH A 775 . ? 1_555 ? 19 AC2 9 HOH D . ? HOH A 778 . ? 4_555 ? 20 AC2 9 HOH D . ? HOH A 781 . ? 1_555 ? # _database_PDB_matrix.entry_id 4F7H _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4F7H _atom_sites.fract_transf_matrix[1][1] 0.017102 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017102 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010840 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 327 ? ? ? A . n A 1 2 SER 2 328 ? ? ? A . n A 1 3 ILE 3 329 ? ? ? A . n A 1 4 MET 4 330 ? ? ? A . n A 1 5 THR 5 331 ? ? ? A . n A 1 6 SER 6 332 ? ? ? A . n A 1 7 GLU 7 333 ? ? ? A . n A 1 8 ASN 8 334 ? ? ? A . n A 1 9 HIS 9 335 ? ? ? A . n A 1 10 LEU 10 336 ? ? ? A . n A 1 11 ASN 11 337 ? ? ? A . n A 1 12 ASN 12 338 ? ? ? A . n A 1 13 SER 13 339 ? ? ? A . n A 1 14 ASP 14 340 ? ? ? A . n A 1 15 LYS 15 341 ? ? ? A . n A 1 16 GLU 16 342 ? ? ? A . n A 1 17 VAL 17 343 ? ? ? A . n A 1 18 ASP 18 344 ? ? ? A . n A 1 19 GLU 19 345 ? ? ? A . n A 1 20 VAL 20 346 ? ? ? A . n A 1 21 ASP 21 347 ? ? ? A . n A 1 22 ALA 22 348 ? ? ? A . n A 1 23 ALA 23 349 ? ? ? A . n A 1 24 LEU 24 350 ? ? ? A . n A 1 25 SER 25 351 ? ? ? A . n A 1 26 ASP 26 352 ? ? ? A . n A 1 27 LEU 27 353 ? ? ? A . n A 1 28 GLU 28 354 ? ? ? A . n A 1 29 ILE 29 355 ? ? ? A . n A 1 30 THR 30 356 ? ? ? A . n A 1 31 LEU 31 357 ? ? ? A . n A 1 32 GLU 32 358 ? ? ? A . n A 1 33 GLY 33 359 ? ? ? A . n A 1 34 GLY 34 360 ? ? ? A . n A 1 35 LYS 35 361 ? ? ? A . n A 1 36 THR 36 362 ? ? ? A . n A 1 37 SER 37 363 ? ? ? A . n A 1 38 THR 38 364 ? ? ? A . n A 1 39 ILE 39 365 365 ILE ILE A . n A 1 40 LEU 40 366 366 LEU LEU A . n A 1 41 GLY 41 367 367 GLY GLY A . n A 1 42 ASP 42 368 368 ASP ASP A . n A 1 43 ILE 43 369 369 ILE ILE A . n A 1 44 THR 44 370 370 THR THR A . n A 1 45 SER 45 371 371 SER SER A . n A 1 46 ILE 46 372 372 ILE ILE A . n A 1 47 PRO 47 373 373 PRO PRO A . n A 1 48 GLU 48 374 374 GLU GLU A . n A 1 49 LEU 49 375 375 LEU LEU A . n A 1 50 ALA 50 376 376 ALA ALA A . n A 1 51 ASP 51 377 377 ASP ASP A . n A 1 52 TYR 52 378 378 TYR TYR A . n A 1 53 ILE 53 379 379 ILE ILE A . n A 1 54 LYS 54 380 380 LYS LYS A . n A 1 55 VAL 55 381 381 VAL VAL A . n A 1 56 PHE 56 382 382 PHE PHE A . n A 1 57 LYS 57 383 383 LYS LYS A . n A 1 58 PRO 58 384 384 PRO PRO A . n A 1 59 LYS 59 385 385 LYS LYS A . n A 1 60 LYS 60 386 386 LYS LYS A . n A 1 61 LEU 61 387 387 LEU LEU A . n A 1 62 THR 62 388 388 THR THR A . n A 1 63 LEU 63 389 389 LEU LEU A . n A 1 64 LYS 64 390 390 LYS LYS A . n A 1 65 GLY 65 391 391 GLY GLY A . n A 1 66 TYR 66 392 392 TYR TYR A . n A 1 67 LYS 67 393 393 LYS LYS A . n A 1 68 GLN 68 394 394 GLN GLN A . n A 1 69 TYR 69 395 395 TYR TYR A . n A 1 70 TRP 70 396 396 TRP TRP A . n A 1 71 CYS 71 397 397 CYS CYS A . n A 1 72 THR 72 398 398 THR THR A . n A 1 73 PHE 73 399 399 PHE PHE A . n A 1 74 LYS 74 400 400 LYS LYS A . n A 1 75 ASP 75 401 401 ASP ASP A . n A 1 76 THR 76 402 402 THR THR A . n A 1 77 SER 77 403 403 SER SER A . n A 1 78 ILE 78 404 404 ILE ILE A . n A 1 79 SER 79 405 405 SER SER A . n A 1 80 CYS 80 406 406 CYS CYS A . n A 1 81 TYR 81 407 407 TYR TYR A . n A 1 82 LYS 82 408 408 LYS LYS A . n A 1 83 SER 83 409 409 SER SER A . n A 1 84 LYS 84 410 410 LYS LYS A . n A 1 85 GLU 85 411 411 GLU GLU A . n A 1 86 GLU 86 412 412 GLU GLU A . n A 1 87 SER 87 413 413 SER SER A . n A 1 88 SER 88 414 414 SER SER A . n A 1 89 GLY 89 415 415 GLY GLY A . n A 1 90 THR 90 416 416 THR THR A . n A 1 91 PRO 91 417 417 PRO PRO A . n A 1 92 ALA 92 418 418 ALA ALA A . n A 1 93 HIS 93 419 419 HIS HIS A . n A 1 94 GLN 94 420 420 GLN GLN A . n A 1 95 MET 95 421 421 MET MET A . n A 1 96 ASN 96 422 422 ASN ASN A . n A 1 97 LEU 97 423 423 LEU LEU A . n A 1 98 ARG 98 424 424 ARG ARG A . n A 1 99 GLY 99 425 425 GLY GLY A . n A 1 100 CYS 100 426 426 CYS CYS A . n A 1 101 GLU 101 427 427 GLU GLU A . n A 1 102 VAL 102 428 428 VAL VAL A . n A 1 103 THR 103 429 429 THR THR A . n A 1 104 PRO 104 430 430 PRO PRO A . n A 1 105 ASP 105 431 431 ASP ASP A . n A 1 106 VAL 106 432 432 VAL VAL A . n A 1 107 ASN 107 433 433 ASN ASN A . n A 1 108 ILE 108 434 434 ILE ILE A . n A 1 109 SER 109 435 435 SER SER A . n A 1 110 GLY 110 436 436 GLY GLY A . n A 1 111 GLN 111 437 437 GLN GLN A . n A 1 112 LYS 112 438 438 LYS LYS A . n A 1 113 PHE 113 439 439 PHE PHE A . n A 1 114 ASN 114 440 440 ASN ASN A . n A 1 115 ILE 115 441 441 ILE ILE A . n A 1 116 LYS 116 442 442 LYS LYS A . n A 1 117 LEU 117 443 443 LEU LEU A . n A 1 118 LEU 118 444 444 LEU LEU A . n A 1 119 ILE 119 445 445 ILE ILE A . n A 1 120 PRO 120 446 446 PRO PRO A . n A 1 121 VAL 121 447 447 VAL VAL A . n A 1 122 ALA 122 448 448 ALA ALA A . n A 1 123 GLU 123 449 449 GLU GLU A . n A 1 124 GLY 124 450 450 GLY GLY A . n A 1 125 MET 125 451 451 MET MET A . n A 1 126 ASN 126 452 452 ASN ASN A . n A 1 127 GLU 127 453 453 GLU GLU A . n A 1 128 ILE 128 454 454 ILE ILE A . n A 1 129 TRP 129 455 455 TRP TRP A . n A 1 130 LEU 130 456 456 LEU LEU A . n A 1 131 ARG 131 457 457 ARG ARG A . n A 1 132 CYS 132 458 458 CYS CYS A . n A 1 133 ASP 133 459 459 ASP ASP A . n A 1 134 ASN 134 460 460 ASN ASN A . n A 1 135 GLU 135 461 461 GLU GLU A . n A 1 136 LYS 136 462 462 LYS LYS A . n A 1 137 GLN 137 463 463 GLN GLN A . n A 1 138 TYR 138 464 464 TYR TYR A . n A 1 139 ALA 139 465 465 ALA ALA A . n A 1 140 HIS 140 466 466 HIS HIS A . n A 1 141 TRP 141 467 467 TRP TRP A . n A 1 142 MET 142 468 468 MET MET A . n A 1 143 ALA 143 469 469 ALA ALA A . n A 1 144 ALA 144 470 470 ALA ALA A . n A 1 145 CYS 145 471 471 CYS CYS A . n A 1 146 ARG 146 472 472 ARG ARG A . n A 1 147 LEU 147 473 473 LEU LEU A . n A 1 148 ALA 148 474 474 ALA ALA A . n A 1 149 SER 149 475 475 SER SER A . n A 1 150 LYS 150 476 476 LYS LYS A . n A 1 151 GLY 151 477 477 GLY GLY A . n A 1 152 LYS 152 478 478 LYS LYS A . n A 1 153 THR 153 479 479 THR THR A . n A 1 154 MET 154 480 480 MET MET A . n A 1 155 ALA 155 481 481 ALA ALA A . n A 1 156 ASP 156 482 482 ASP ASP A . n A 1 157 SER 157 483 483 SER SER A . n A 1 158 SER 158 484 484 SER SER A . n A 1 159 TYR 159 485 485 TYR TYR A . n A 1 160 ASN 160 486 486 ASN ASN A . n A 1 161 LEU 161 487 487 LEU LEU A . n A 1 162 GLU 162 488 488 GLU GLU A . n A 1 163 VAL 163 489 489 VAL VAL A . n A 1 164 GLN 164 490 490 GLN GLN A . n A 1 165 ASN 165 491 491 ASN ASN A . n A 1 166 ILE 166 492 492 ILE ILE A . n A 1 167 LEU 167 493 493 LEU LEU A . n A 1 168 SER 168 494 494 SER SER A . n A 1 169 PHE 169 495 495 PHE PHE A . n A 1 170 LEU 170 496 496 LEU LEU A . n A 1 171 LYS 171 497 497 LYS LYS A . n A 1 172 MET 172 498 498 MET MET A . n A 1 173 GLN 173 499 499 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SRT 1 601 601 SRT TAR A . C 2 SRT 1 602 602 SRT TAR A . D 3 HOH 1 701 1 HOH HOH A . D 3 HOH 2 702 2 HOH HOH A . D 3 HOH 3 703 3 HOH HOH A . D 3 HOH 4 704 4 HOH HOH A . D 3 HOH 5 705 5 HOH HOH A . D 3 HOH 6 706 6 HOH HOH A . D 3 HOH 7 707 7 HOH HOH A . D 3 HOH 8 708 8 HOH HOH A . D 3 HOH 9 709 9 HOH HOH A . D 3 HOH 10 710 10 HOH HOH A . D 3 HOH 11 711 11 HOH HOH A . D 3 HOH 12 712 12 HOH HOH A . D 3 HOH 13 713 13 HOH HOH A . D 3 HOH 14 714 14 HOH HOH A . D 3 HOH 15 715 15 HOH HOH A . D 3 HOH 16 716 16 HOH HOH A . D 3 HOH 17 717 17 HOH HOH A . D 3 HOH 18 718 18 HOH HOH A . D 3 HOH 19 719 19 HOH HOH A . D 3 HOH 20 720 20 HOH HOH A . D 3 HOH 21 721 21 HOH HOH A . D 3 HOH 22 722 22 HOH HOH A . D 3 HOH 23 723 23 HOH HOH A . D 3 HOH 24 724 24 HOH HOH A . D 3 HOH 25 725 25 HOH HOH A . D 3 HOH 26 726 26 HOH HOH A . D 3 HOH 27 727 27 HOH HOH A . D 3 HOH 28 728 28 HOH HOH A . D 3 HOH 29 729 29 HOH HOH A . D 3 HOH 30 730 30 HOH HOH A . D 3 HOH 31 731 31 HOH HOH A . D 3 HOH 32 732 32 HOH HOH A . D 3 HOH 33 733 33 HOH HOH A . D 3 HOH 34 734 34 HOH HOH A . D 3 HOH 35 735 35 HOH HOH A . D 3 HOH 36 736 36 HOH HOH A . D 3 HOH 37 737 37 HOH HOH A . D 3 HOH 38 738 38 HOH HOH A . D 3 HOH 39 739 39 HOH HOH A . D 3 HOH 40 740 40 HOH HOH A . D 3 HOH 41 741 41 HOH HOH A . D 3 HOH 42 742 42 HOH HOH A . D 3 HOH 43 743 43 HOH HOH A . D 3 HOH 44 744 44 HOH HOH A . D 3 HOH 45 745 45 HOH HOH A . D 3 HOH 46 746 46 HOH HOH A . D 3 HOH 47 747 47 HOH HOH A . D 3 HOH 48 748 48 HOH HOH A . D 3 HOH 49 749 49 HOH HOH A . D 3 HOH 50 750 50 HOH HOH A . D 3 HOH 51 751 51 HOH HOH A . D 3 HOH 52 752 52 HOH HOH A . D 3 HOH 53 753 53 HOH HOH A . D 3 HOH 54 754 54 HOH HOH A . D 3 HOH 55 755 55 HOH HOH A . D 3 HOH 56 756 56 HOH HOH A . D 3 HOH 57 757 57 HOH HOH A . D 3 HOH 58 758 58 HOH HOH A . D 3 HOH 59 759 59 HOH HOH A . D 3 HOH 60 760 60 HOH HOH A . D 3 HOH 61 761 61 HOH HOH A . D 3 HOH 62 762 62 HOH HOH A . D 3 HOH 63 763 63 HOH HOH A . D 3 HOH 64 764 64 HOH HOH A . D 3 HOH 65 765 65 HOH HOH A . D 3 HOH 66 766 66 HOH HOH A . D 3 HOH 67 767 67 HOH HOH A . D 3 HOH 68 768 68 HOH HOH A . D 3 HOH 69 769 69 HOH HOH A . D 3 HOH 70 770 70 HOH HOH A . D 3 HOH 71 771 71 HOH HOH A . D 3 HOH 72 772 72 HOH HOH A . D 3 HOH 73 773 73 HOH HOH A . D 3 HOH 74 774 74 HOH HOH A . D 3 HOH 75 775 75 HOH HOH A . D 3 HOH 76 776 76 HOH HOH A . D 3 HOH 77 777 77 HOH HOH A . D 3 HOH 78 778 78 HOH HOH A . D 3 HOH 79 779 79 HOH HOH A . D 3 HOH 80 780 80 HOH HOH A . D 3 HOH 81 781 81 HOH HOH A . D 3 HOH 82 782 82 HOH HOH A . D 3 HOH 83 783 83 HOH HOH A . D 3 HOH 84 784 84 HOH HOH A . D 3 HOH 85 785 85 HOH HOH A . D 3 HOH 86 786 86 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 739 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-13 2 'Structure model' 1 1 2012-07-18 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 22.1511 10.2129 24.5856 0.3459 0.2083 0.2169 0.0199 0.0342 0.0156 1.0361 4.7027 0.4290 0.9275 0.2142 0.9769 0.2038 0.1268 -0.0871 0.2486 -0.2024 -0.3236 0.1729 0.1529 -0.0635 'X-RAY DIFFRACTION' 2 ? refined 22.3689 11.2320 27.9062 0.2864 0.1846 0.1868 -0.0693 0.0146 -0.0114 1.2204 3.0966 4.4855 -0.0261 -0.4947 0.3994 0.0164 -0.0215 0.1808 -0.3507 0.0936 -0.0046 -0.6666 0.4504 -0.0559 'X-RAY DIFFRACTION' 3 ? refined 15.9554 6.1194 34.9868 0.2302 0.1004 0.1862 -0.0192 0.0199 -0.0062 3.1324 2.8244 3.6402 -0.3522 0.4916 0.0578 -0.0403 -0.0117 0.1637 0.0238 -0.0475 0.1163 -0.3238 -0.0187 0.0517 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 365:392) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 393:447) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 448:499) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 PHASES phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 741 ? ? O A HOH 774 ? ? 1.81 2 1 OD2 A ASP 431 ? ? O A HOH 754 ? ? 1.91 3 1 O A HOH 736 ? ? O A HOH 782 ? ? 2.09 4 1 N A ILE 365 ? ? O A HOH 721 ? ? 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 366 ? ? 56.93 19.28 2 1 ASP A 368 ? ? -103.77 -157.05 3 1 ASP A 401 ? ? 57.00 -112.21 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 327 ? A SER 1 2 1 Y 1 A SER 328 ? A SER 2 3 1 Y 1 A ILE 329 ? A ILE 3 4 1 Y 1 A MET 330 ? A MET 4 5 1 Y 1 A THR 331 ? A THR 5 6 1 Y 1 A SER 332 ? A SER 6 7 1 Y 1 A GLU 333 ? A GLU 7 8 1 Y 1 A ASN 334 ? A ASN 8 9 1 Y 1 A HIS 335 ? A HIS 9 10 1 Y 1 A LEU 336 ? A LEU 10 11 1 Y 1 A ASN 337 ? A ASN 11 12 1 Y 1 A ASN 338 ? A ASN 12 13 1 Y 1 A SER 339 ? A SER 13 14 1 Y 1 A ASP 340 ? A ASP 14 15 1 Y 1 A LYS 341 ? A LYS 15 16 1 Y 1 A GLU 342 ? A GLU 16 17 1 Y 1 A VAL 343 ? A VAL 17 18 1 Y 1 A ASP 344 ? A ASP 18 19 1 Y 1 A GLU 345 ? A GLU 19 20 1 Y 1 A VAL 346 ? A VAL 20 21 1 Y 1 A ASP 347 ? A ASP 21 22 1 Y 1 A ALA 348 ? A ALA 22 23 1 Y 1 A ALA 349 ? A ALA 23 24 1 Y 1 A LEU 350 ? A LEU 24 25 1 Y 1 A SER 351 ? A SER 25 26 1 Y 1 A ASP 352 ? A ASP 26 27 1 Y 1 A LEU 353 ? A LEU 27 28 1 Y 1 A GLU 354 ? A GLU 28 29 1 Y 1 A ILE 355 ? A ILE 29 30 1 Y 1 A THR 356 ? A THR 30 31 1 Y 1 A LEU 357 ? A LEU 31 32 1 Y 1 A GLU 358 ? A GLU 32 33 1 Y 1 A GLY 359 ? A GLY 33 34 1 Y 1 A GLY 360 ? A GLY 34 35 1 Y 1 A LYS 361 ? A LYS 35 36 1 Y 1 A THR 362 ? A THR 36 37 1 Y 1 A SER 363 ? A SER 37 38 1 Y 1 A THR 364 ? A THR 38 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 SRT O1 O N N 304 SRT O11 O N N 305 SRT C1 C N N 306 SRT C2 C N S 307 SRT O2 O N N 308 SRT C3 C N R 309 SRT O3 O N N 310 SRT C4 C N N 311 SRT O4 O N N 312 SRT O41 O N N 313 SRT H1 H N N 314 SRT H2 H N N 315 SRT HA H N N 316 SRT H3 H N N 317 SRT HB H N N 318 SRT H41 H N N 319 THR N N N N 320 THR CA C N S 321 THR C C N N 322 THR O O N N 323 THR CB C N R 324 THR OG1 O N N 325 THR CG2 C N N 326 THR OXT O N N 327 THR H H N N 328 THR H2 H N N 329 THR HA H N N 330 THR HB H N N 331 THR HG1 H N N 332 THR HG21 H N N 333 THR HG22 H N N 334 THR HG23 H N N 335 THR HXT H N N 336 TRP N N N N 337 TRP CA C N S 338 TRP C C N N 339 TRP O O N N 340 TRP CB C N N 341 TRP CG C Y N 342 TRP CD1 C Y N 343 TRP CD2 C Y N 344 TRP NE1 N Y N 345 TRP CE2 C Y N 346 TRP CE3 C Y N 347 TRP CZ2 C Y N 348 TRP CZ3 C Y N 349 TRP CH2 C Y N 350 TRP OXT O N N 351 TRP H H N N 352 TRP H2 H N N 353 TRP HA H N N 354 TRP HB2 H N N 355 TRP HB3 H N N 356 TRP HD1 H N N 357 TRP HE1 H N N 358 TRP HE3 H N N 359 TRP HZ2 H N N 360 TRP HZ3 H N N 361 TRP HH2 H N N 362 TRP HXT H N N 363 TYR N N N N 364 TYR CA C N S 365 TYR C C N N 366 TYR O O N N 367 TYR CB C N N 368 TYR CG C Y N 369 TYR CD1 C Y N 370 TYR CD2 C Y N 371 TYR CE1 C Y N 372 TYR CE2 C Y N 373 TYR CZ C Y N 374 TYR OH O N N 375 TYR OXT O N N 376 TYR H H N N 377 TYR H2 H N N 378 TYR HA H N N 379 TYR HB2 H N N 380 TYR HB3 H N N 381 TYR HD1 H N N 382 TYR HD2 H N N 383 TYR HE1 H N N 384 TYR HE2 H N N 385 TYR HH H N N 386 TYR HXT H N N 387 VAL N N N N 388 VAL CA C N S 389 VAL C C N N 390 VAL O O N N 391 VAL CB C N N 392 VAL CG1 C N N 393 VAL CG2 C N N 394 VAL OXT O N N 395 VAL H H N N 396 VAL H2 H N N 397 VAL HA H N N 398 VAL HB H N N 399 VAL HG11 H N N 400 VAL HG12 H N N 401 VAL HG13 H N N 402 VAL HG21 H N N 403 VAL HG22 H N N 404 VAL HG23 H N N 405 VAL HXT H N N 406 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 SRT O1 C1 sing N N 290 SRT O1 H1 sing N N 291 SRT O11 C1 doub N N 292 SRT C1 C2 sing N N 293 SRT C2 O2 sing N N 294 SRT C2 C3 sing N N 295 SRT C2 H2 sing N N 296 SRT O2 HA sing N N 297 SRT C3 O3 sing N N 298 SRT C3 C4 sing N N 299 SRT C3 H3 sing N N 300 SRT O3 HB sing N N 301 SRT C4 O4 doub N N 302 SRT C4 O41 sing N N 303 SRT O41 H41 sing N N 304 THR N CA sing N N 305 THR N H sing N N 306 THR N H2 sing N N 307 THR CA C sing N N 308 THR CA CB sing N N 309 THR CA HA sing N N 310 THR C O doub N N 311 THR C OXT sing N N 312 THR CB OG1 sing N N 313 THR CB CG2 sing N N 314 THR CB HB sing N N 315 THR OG1 HG1 sing N N 316 THR CG2 HG21 sing N N 317 THR CG2 HG22 sing N N 318 THR CG2 HG23 sing N N 319 THR OXT HXT sing N N 320 TRP N CA sing N N 321 TRP N H sing N N 322 TRP N H2 sing N N 323 TRP CA C sing N N 324 TRP CA CB sing N N 325 TRP CA HA sing N N 326 TRP C O doub N N 327 TRP C OXT sing N N 328 TRP CB CG sing N N 329 TRP CB HB2 sing N N 330 TRP CB HB3 sing N N 331 TRP CG CD1 doub Y N 332 TRP CG CD2 sing Y N 333 TRP CD1 NE1 sing Y N 334 TRP CD1 HD1 sing N N 335 TRP CD2 CE2 doub Y N 336 TRP CD2 CE3 sing Y N 337 TRP NE1 CE2 sing Y N 338 TRP NE1 HE1 sing N N 339 TRP CE2 CZ2 sing Y N 340 TRP CE3 CZ3 doub Y N 341 TRP CE3 HE3 sing N N 342 TRP CZ2 CH2 doub Y N 343 TRP CZ2 HZ2 sing N N 344 TRP CZ3 CH2 sing Y N 345 TRP CZ3 HZ3 sing N N 346 TRP CH2 HH2 sing N N 347 TRP OXT HXT sing N N 348 TYR N CA sing N N 349 TYR N H sing N N 350 TYR N H2 sing N N 351 TYR CA C sing N N 352 TYR CA CB sing N N 353 TYR CA HA sing N N 354 TYR C O doub N N 355 TYR C OXT sing N N 356 TYR CB CG sing N N 357 TYR CB HB2 sing N N 358 TYR CB HB3 sing N N 359 TYR CG CD1 doub Y N 360 TYR CG CD2 sing Y N 361 TYR CD1 CE1 sing Y N 362 TYR CD1 HD1 sing N N 363 TYR CD2 CE2 doub Y N 364 TYR CD2 HD2 sing N N 365 TYR CE1 CZ doub Y N 366 TYR CE1 HE1 sing N N 367 TYR CE2 CZ sing Y N 368 TYR CE2 HE2 sing N N 369 TYR CZ OH sing N N 370 TYR OH HH sing N N 371 TYR OXT HXT sing N N 372 VAL N CA sing N N 373 VAL N H sing N N 374 VAL N H2 sing N N 375 VAL CA C sing N N 376 VAL CA CB sing N N 377 VAL CA HA sing N N 378 VAL C O doub N N 379 VAL C OXT sing N N 380 VAL CB CG1 sing N N 381 VAL CB CG2 sing N N 382 VAL CB HB sing N N 383 VAL CG1 HG11 sing N N 384 VAL CG1 HG12 sing N N 385 VAL CG1 HG13 sing N N 386 VAL CG2 HG21 sing N N 387 VAL CG2 HG22 sing N N 388 VAL CG2 HG23 sing N N 389 VAL OXT HXT sing N N 390 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'S,R MESO-TARTARIC ACID' SRT 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2YS3 _pdbx_initial_refinement_model.details ? #