HEADER HYDROLASE 18-MAY-12 4F8Z TITLE CARBOXYPEPTIDASE T WITH BOC-LEU COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOXYPEPTIDASE T; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 99-421; COMPND 5 EC: 3.4.17.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOACTINOMYCES VULGARIS; SOURCE 3 ORGANISM_TAXID: 2026; SOURCE 4 GENE: CPT; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.I.TIMOFEEV,S.A.KUZNETSOV,V.K.AKPAROV,I.P.KURANOVA REVDAT 2 30-SEP-15 4F8Z 1 JRNL REVDAT 1 22-MAY-13 4F8Z 0 JRNL AUTH V.I.TIMOFEEV,S.A.KUZNETSOV,V.K.H.AKPAROV,G.G.CHESTUKHINA, JRNL AUTH 2 I.P.KURANOVA JRNL TITL THREE-DIMENSIONAL STRUCTURE OF CARBOXYPEPTIDASE T FROM JRNL TITL 2 THERMOACTINOMYCES VULGARIS IN COMPLEX WITH N-BOC-L-LEUCINE. JRNL REF BIOCHEMISTRY MOSC. V. 78 252 2013 JRNL REFN ISSN 0006-2979 JRNL PMID 23586718 JRNL DOI 10.1134/S0006297913030061 REMARK 2 REMARK 2 RESOLUTION. 1.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 146524 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.140 REMARK 3 R VALUE (WORKING SET) : 0.139 REMARK 3 FREE R VALUE : 0.152 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7780 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.38 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10026 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 526 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2581 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 168 REMARK 3 SOLVENT ATOMS : 419 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.033 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.032 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.019 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.076 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2912 ; 0.007 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 16 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3943 ; 1.194 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 32 ; 0.384 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 352 ; 6.169 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 142 ;29.713 ;24.437 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 434 ;10.885 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;14.022 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 418 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2245 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2927 ; 0.975 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 122 ;21.819 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3178 ; 9.251 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4F8Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAY-12. REMARK 100 THE RCSB ID CODE IS RCSB072605. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 286940 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.120 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: COUNTER-DIFFUSION. PROTEIN SOLUTION: REMARK 280 250 MM NACL, 1 MM CACL2, 10 MM MES/NAOH, PH 6.0. PRECIPITANT REMARK 280 SOLUTION: 1.4 M (NH4)2SO4, 5% MPD, 50 MM, MES/NAOH, PH 6.0, 2.4 M REMARK 280 BOC-L-LEU REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 52.03400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 52.03400 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 52.03400 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 52.03400 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 52.03400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 52.03400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 595 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 597 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 72 55.92 -91.75 REMARK 500 ASN A 110 97.79 -161.43 REMARK 500 ASN A 131 -167.20 -75.12 REMARK 500 SER A 207 -14.07 155.58 REMARK 500 CYS A 314 78.51 54.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS A 155 CYS A 156 -149.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 204 ND1 REMARK 620 2 HIS A 69 ND1 101.6 REMARK 620 3 GLU A 72 OE2 148.2 93.3 REMARK 620 4 GLU A 72 OE1 90.9 114.9 57.3 REMARK 620 5 BL2 A 402 O 125.6 87.3 82.7 133.6 REMARK 620 6 BL2 A 402 OXT 96.6 137.4 90.9 102.8 51.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 407 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 800 O REMARK 620 2 GLU A 104 OE1 113.1 REMARK 620 3 ASP A 56 OD1 155.9 90.9 REMARK 620 4 HOH A 646 O 79.9 166.8 76.1 REMARK 620 5 GLU A 57 O 88.8 82.0 92.7 96.0 REMARK 620 6 GLU A 61 OE2 88.0 87.1 95.5 96.4 166.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 409 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 501 O REMARK 620 2 HOH A 866 O 91.8 REMARK 620 3 SER A 7 O 95.8 75.5 REMARK 620 4 TYR A 9 O 90.1 159.4 83.9 REMARK 620 5 HOH A 555 O 168.2 98.6 92.2 82.2 REMARK 620 6 GLU A 14 OE1 81.4 114.9 169.2 85.6 89.1 REMARK 620 7 GLU A 14 OE2 85.8 68.0 143.5 132.5 92.9 47.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 406 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 57 OE1 REMARK 620 2 ASP A 51 O 94.1 REMARK 620 3 SER A 50 OG 171.8 88.6 REMARK 620 4 HOH A 506 O 90.3 79.6 82.5 REMARK 620 5 ASP A 51 OD1 90.8 70.8 97.5 150.3 REMARK 620 6 GLU A 59 OE1 91.7 174.2 85.8 100.7 108.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 408 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 59 OE2 REMARK 620 2 ASN A 101 O 75.0 REMARK 620 3 ASP A 51 OD2 130.5 78.8 REMARK 620 4 ASP A 51 OD1 88.5 76.1 44.3 REMARK 620 N 1 2 3 REMARK 630 REMARK 630 MOLECULE TYPE: NULL REMARK 630 MOLECULE NAME: N-(TERT-BUTOXYCARBONYL)-L-LEUCINE REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 BL2 A 402 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: BOC LEU REMARK 630 DETAILS: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BL2 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 422 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 424 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 425 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 426 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 427 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 428 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 429 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 430 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 431 DBREF 4F8Z A 1 323 UNP P29068 CBPT_THEVU 99 421 SEQRES 1 A 323 ASP PHE PRO SER TYR ASP SER GLY TYR HIS ASN TYR ASN SEQRES 2 A 323 GLU MET VAL ASN LYS ILE ASN THR VAL ALA SER ASN TYR SEQRES 3 A 323 PRO ASN ILE VAL LYS LYS PHE SER ILE GLY LYS SER TYR SEQRES 4 A 323 GLU GLY ARG GLU LEU TRP ALA VAL LYS ILE SER ASP ASN SEQRES 5 A 323 VAL GLY THR ASP GLU ASN GLU PRO GLU VAL LEU TYR THR SEQRES 6 A 323 ALA LEU HIS HIS ALA ARG GLU HIS LEU THR VAL GLU MET SEQRES 7 A 323 ALA LEU TYR THR LEU ASP LEU PHE THR GLN ASN TYR ASN SEQRES 8 A 323 LEU ASP SER ARG ILE THR ASN LEU VAL ASN ASN ARG GLU SEQRES 9 A 323 ILE TYR ILE VAL PHE ASN ILE ASN PRO ASP GLY GLY GLU SEQRES 10 A 323 TYR ASP ILE SER SER GLY SER TYR LYS SER TRP ARG LYS SEQRES 11 A 323 ASN ARG GLN PRO ASN SER GLY SER SER TYR VAL GLY THR SEQRES 12 A 323 ASP LEU ASN ARG ASN TYR GLY TYR LYS TRP GLY CYS CYS SEQRES 13 A 323 GLY GLY SER SER GLY SER PRO SER SER GLU THR TYR ARG SEQRES 14 A 323 GLY ARG SER ALA PHE SER ALA PRO GLU THR ALA ALA MET SEQRES 15 A 323 ARG ASP PHE ILE ASN SER ARG VAL VAL GLY GLY LYS GLN SEQRES 16 A 323 GLN ILE LYS THR LEU ILE THR PHE HIS THR TYR SER GLU SEQRES 17 A 323 LEU ILE LEU TYR PRO TYR GLY TYR THR TYR THR ASP VAL SEQRES 18 A 323 PRO SER ASP MET THR GLN ASP ASP PHE ASN VAL PHE LYS SEQRES 19 A 323 THR MET ALA ASN THR MET ALA GLN THR ASN GLY TYR THR SEQRES 20 A 323 PRO GLN GLN ALA SER ASP LEU TYR ILE THR ASP GLY ASP SEQRES 21 A 323 MET THR ASP TRP ALA TYR GLY GLN HIS LYS ILE PHE ALA SEQRES 22 A 323 PHE THR PHE GLU MET TYR PRO THR SER TYR ASN PRO GLY SEQRES 23 A 323 PHE TYR PRO PRO ASP GLU VAL ILE GLY ARG GLU THR SER SEQRES 24 A 323 ARG ASN LYS GLU ALA VAL LEU TYR VAL ALA GLU LYS ALA SEQRES 25 A 323 ASP CYS PRO TYR SER VAL ILE GLY LYS SER CYS HET ZN A 401 1 HET BL2 A 402 16 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET CA A 406 1 HET CA A 407 1 HET CA A 408 1 HET CA A 409 1 HET GOL A 410 6 HET GOL A 411 6 HET GOL A 412 6 HET GOL A 413 6 HET GOL A 414 6 HET GOL A 415 6 HET GOL A 416 6 HET GOL A 417 6 HET GOL A 418 6 HET GOL A 419 6 HET GOL A 420 6 HET GOL A 421 6 HET GOL A 422 6 HET GOL A 423 6 HET GOL A 424 6 HET GOL A 425 6 HET GOL A 426 6 HET GOL A 427 6 HET GOL A 428 6 HET GOL A 429 6 HET GOL A 430 6 HET GOL A 431 6 HETNAM ZN ZINC ION HETNAM BL2 N-(TERT-BUTOXYCARBONYL)-L-LEUCINE HETNAM SO4 SULFATE ION HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 BL2 C11 H21 N O4 FORMUL 4 SO4 3(O4 S 2-) FORMUL 7 CA 4(CA 2+) FORMUL 11 GOL 22(C3 H8 O3) FORMUL 33 HOH *419(H2 O) HELIX 1 1 PRO A 3 SER A 7 5 5 HELIX 2 2 ASN A 11 TYR A 26 1 16 HELIX 3 3 HIS A 73 ASN A 89 1 17 HELIX 4 4 ASP A 93 ARG A 103 1 11 HELIX 5 5 ASN A 112 SER A 121 1 10 HELIX 6 6 ASP A 144 ASN A 148 5 5 HELIX 7 7 ALA A 176 ARG A 189 1 14 HELIX 8 8 THR A 226 GLY A 245 1 20 HELIX 9 9 ALA A 251 TYR A 255 1 5 HELIX 10 10 ASP A 260 LYS A 270 1 11 HELIX 11 11 PRO A 290 GLU A 292 5 3 HELIX 12 12 VAL A 293 ARG A 300 1 8 HELIX 13 13 ASN A 301 ALA A 312 1 12 HELIX 14 14 ASP A 313 GLY A 320 5 8 SHEET 1 A 8 VAL A 30 LYS A 37 0 SHEET 2 A 8 GLU A 43 ILE A 49 -1 O ALA A 46 N PHE A 33 SHEET 3 A 8 GLU A 104 VAL A 108 -1 O ILE A 105 N ILE A 49 SHEET 4 A 8 GLU A 61 ALA A 66 1 N VAL A 62 O TYR A 106 SHEET 5 A 8 ILE A 197 HIS A 204 1 O PHE A 203 N THR A 65 SHEET 6 A 8 PHE A 272 GLU A 277 1 O PHE A 276 N HIS A 204 SHEET 7 A 8 LEU A 209 TYR A 212 -1 N LEU A 211 O THR A 275 SHEET 8 A 8 THR A 247 GLN A 250 1 O GLN A 249 N ILE A 210 SHEET 1 B 2 VAL A 190 VAL A 191 0 SHEET 2 B 2 LYS A 194 GLN A 195 -1 O LYS A 194 N VAL A 191 SSBOND 1 CYS A 155 CYS A 156 1555 1555 2.05 SSBOND 2 CYS A 314 CYS A 323 1555 1555 2.04 LINK ND1 HIS A 204 ZN ZN A 401 1555 1555 2.07 LINK ND1 HIS A 69 ZN ZN A 401 1555 1555 2.08 LINK CA CA A 407 O HOH A 800 1555 1555 2.14 LINK CA CA A 409 O HOH A 501 1555 1555 2.26 LINK OE2 GLU A 72 ZN ZN A 401 1555 1555 2.26 LINK OE1 GLU A 57 CA CA A 406 1555 1555 2.26 LINK OE1 GLU A 104 CA CA A 407 1555 1555 2.28 LINK OE1 GLU A 72 ZN ZN A 401 1555 1555 2.30 LINK CA CA A 409 O HOH A 866 1555 1555 2.30 LINK O ASP A 51 CA CA A 406 1555 1555 2.34 LINK O SER A 7 CA CA A 409 1555 1555 2.36 LINK OG SER A 50 CA CA A 406 1555 1555 2.36 LINK OD1 ASP A 56 CA CA A 407 1555 1555 2.38 LINK O TYR A 9 CA CA A 409 1555 1555 2.38 LINK CA CA A 407 O HOH A 646 1555 1555 2.39 LINK O GLU A 57 CA CA A 407 1555 1555 2.41 LINK CA CA A 406 O HOH A 506 1555 1555 2.41 LINK OD1 ASP A 51 CA CA A 406 1555 1555 2.41 LINK OE2 GLU A 59 CA CA A 408 1555 1555 2.41 LINK OE2 GLU A 61 CA CA A 407 1555 1555 2.46 LINK CA CA A 409 O HOH A 555 1555 1555 2.48 LINK OE1 GLU A 59 CA CA A 406 1555 1555 2.50 LINK OE1 GLU A 14 CA CA A 409 1555 1555 2.50 LINK O ASN A 101 CA CA A 408 1555 1555 2.54 LINK OD2 ASP A 51 CA CA A 408 1555 1555 2.87 LINK OE2 GLU A 14 CA CA A 409 1555 1555 2.90 LINK OD1 ASP A 51 CA CA A 408 1555 1555 2.92 LINK ZN ZN A 401 O BL2 A 402 1555 1555 2.18 LINK ZN ZN A 401 OXT BL2 A 402 1555 1555 2.62 CISPEP 1 THR A 205 TYR A 206 0 -3.74 CISPEP 2 PRO A 213 TYR A 214 0 0.57 CISPEP 3 TYR A 279 PRO A 280 0 -0.41 CISPEP 4 ASN A 284 PRO A 285 0 11.18 SITE 1 AC1 4 HIS A 69 GLU A 72 HIS A 204 BL2 A 402 SITE 1 AC2 14 HIS A 69 ARG A 71 GLU A 72 ARG A 129 SITE 2 AC2 14 HIS A 204 THR A 205 TYR A 206 SER A 207 SITE 3 AC2 14 TYR A 255 GLU A 277 PHE A 287 ZN A 401 SITE 4 AC2 14 SO4 A 403 HOH A 507 SITE 1 AC3 8 HIS A 69 ARG A 129 ASN A 146 ARG A 147 SITE 2 AC3 8 TYR A 255 GLU A 277 BL2 A 402 GOL A 413 SITE 1 AC4 8 PHE A 174 ARG A 183 ASN A 187 TRP A 264 SITE 2 AC4 8 GLN A 268 HOH A 622 HOH A 643 HOH A 809 SITE 1 AC5 7 VAL A 16 ASN A 20 ASN A 25 LYS A 32 SITE 2 AC5 7 TRP A 45 HOH A 533 HOH A 841 SITE 1 AC6 5 SER A 50 ASP A 51 GLU A 57 GLU A 59 SITE 2 AC6 5 HOH A 506 SITE 1 AC7 6 ASP A 56 GLU A 57 GLU A 61 GLU A 104 SITE 2 AC7 6 HOH A 646 HOH A 800 SITE 1 AC8 4 ASP A 51 GLU A 57 GLU A 59 ASN A 101 SITE 1 AC9 6 SER A 7 TYR A 9 GLU A 14 HOH A 501 SITE 2 AC9 6 HOH A 555 HOH A 866 SITE 1 BC1 5 PRO A 3 SER A 4 TYR A 5 HOH A 759 SITE 2 BC1 5 HOH A 781 SITE 1 BC2 4 HIS A 10 LYS A 18 HOH A 603 HOH A 675 SITE 1 BC3 9 HIS A 10 LYS A 18 GLU A 77 LEU A 80 SITE 2 BC3 9 TYR A 81 ASP A 84 ILE A 294 HOH A 634 SITE 3 BC3 9 HOH A 758 SITE 1 BC4 8 ASN A 146 LEU A 211 ALA A 251 THR A 257 SITE 2 BC4 8 ASP A 260 SO4 A 403 HOH A 737 HOH A 810 SITE 1 BC5 9 TRP A 128 TYR A 140 VAL A 141 GOL A 415 SITE 2 BC5 9 HOH A 552 HOH A 589 HOH A 623 HOH A 693 SITE 3 BC5 9 HOH A 726 SITE 1 BC6 3 SER A 139 TYR A 140 GOL A 414 SITE 1 BC7 6 PHE A 33 ASP A 184 PHE A 185 GOL A 417 SITE 2 BC7 6 HOH A 539 HOH A 897 SITE 1 BC8 4 LYS A 48 TYR A 106 GOL A 416 HOH A 556 SITE 1 BC9 6 GLY A 193 GLN A 195 HIS A 269 HOH A 694 SITE 2 BC9 6 HOH A 805 HOH A 831 SITE 1 CC1 11 VAL A 221 PRO A 222 SER A 223 TYR A 283 SITE 2 CC1 11 ASN A 284 PRO A 285 GOL A 421 HOH A 518 SITE 3 CC1 11 HOH A 580 HOH A 630 HOH A 682 SITE 1 CC2 6 THR A 226 GLN A 227 ASP A 228 HOH A 820 SITE 2 CC2 6 HOH A 833 HOH A 890 SITE 1 CC3 8 SER A 223 TYR A 288 GOL A 419 HOH A 585 SITE 2 CC3 8 HOH A 587 HOH A 630 HOH A 801 HOH A 862 SITE 1 CC4 7 SER A 138 SER A 139 TYR A 140 ARG A 171 SITE 2 CC4 7 SER A 172 HOH A 547 HOH A 620 SITE 1 CC5 8 TYR A 39 GLN A 133 PRO A 134 ARG A 171 SITE 2 CC5 8 GOL A 427 HOH A 685 HOH A 742 HOH A 826 SITE 1 CC6 4 ARG A 296 SER A 299 HOH A 772 HOH A 799 SITE 1 CC7 7 ASP A 1 ASN A 11 GLU A 117 ILE A 120 SITE 2 CC7 7 HOH A 548 HOH A 701 HOH A 881 SITE 1 CC8 5 SER A 207 THR A 247 THR A 281 HOH A 669 SITE 2 CC8 5 HOH A 806 SITE 1 CC9 8 PHE A 174 SER A 175 PRO A 177 ALA A 180 SITE 2 CC9 8 GOL A 423 HOH A 566 HOH A 826 HOH A 851 SITE 1 DC1 5 THR A 239 TYR A 307 LYS A 311 HOH A 787 SITE 2 DC1 5 HOH A 843 SITE 1 DC2 4 TYR A 12 ARG A 42 GLU A 117 GOL A 431 SITE 1 DC3 7 TYR A 81 ASP A 84 LEU A 85 GLN A 88 SITE 2 DC3 7 ASN A 89 HOH A 818 HOH A 840 SITE 1 DC4 3 GLU A 40 GLY A 41 GOL A 429 CRYST1 157.914 157.914 104.068 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006333 0.003656 0.000000 0.00000 SCALE2 0.000000 0.007312 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009609 0.00000