HEADER TRANSPORT PROTEIN 28-MAY-12 4FDD TITLE CRYSTAL STRUCTURE OF KAP BETA2-PY-NLS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSPORTIN-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IMPORTIN BETA-2, KARYOPHERIN BETA-2, M9 REGION INTERACTION COMPND 5 PROTEIN, MIP; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA-BINDING PROTEIN FUS; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: 75 KDA DNA-PAIRING PROTEIN, ONCOGENE FUS, ONCOGENE TLS, COMPND 11 POMP75, TRANSLOCATED IN LIPOSARCOMA PROTEIN; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KPNB2, MIP1, TNPO1, TRANSPORTIN-1, TRN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEXTEV; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: FUS, TLS; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PGEXTEV KEYWDS HEAT REPEATS, KARYOPHERIN, NUCLEAR IMPORT, PROTEIN TRANSPORT, KEYWDS 2 IMPORTIN, TRANSPORTIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Z.C.ZHANG,Y.M.CHOOK REVDAT 5 28-FEB-24 4FDD 1 SEQADV REVDAT 4 15-NOV-17 4FDD 1 REMARK REVDAT 3 16-AUG-17 4FDD 1 SOURCE REMARK REVDAT 2 12-DEC-12 4FDD 1 JRNL REVDAT 1 18-JUL-12 4FDD 0 JRNL AUTH Z.C.ZHANG,Y.M.CHOOK JRNL TITL STRUCTURAL AND ENERGETIC BASIS OF ALS-CAUSING MUTATIONS IN JRNL TITL 2 THE ATYPICAL PROLINE-TYROSINE NUCLEAR LOCALIZATION SIGNAL OF JRNL TITL 3 THE FUSED IN SARCOMA PROTEIN (FUS). JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 12017 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22778397 JRNL DOI 10.1073/PNAS.1207247109 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.E.CANSIZOGLU,Y.M.CHOOK REMARK 1 TITL CONFORMATIONAL HETEROGENEITY OF KARYOPHERIN BETA2 IS REMARK 1 TITL 2 SEGMENTAL. REMARK 1 REF STRUCTURE V. 15 1431 2007 REMARK 1 REFN ISSN 0969-2126 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.E.CANSIZOGLU,B.J.LEE,Z.C.ZHANG,B.M.FONTOURA,Y.M CHOOK REMARK 1 TITL STRUCTURE-BASED DESIGN OF A PATHWAY-SPECIFIC NUCLEAR IMPORT REMARK 1 TITL 2 INHIBITOR. REMARK 1 REF NAT.STRUCT.MOL.BIOL. V. 14 452 2007 REMARK 1 REFN ISSN 1545-9993 REMARK 1 REFERENCE 3 REMARK 1 AUTH B.J.LEE,A.E.CANSIZOGLU,T.H.LOUIS,Z.C.ZHANG,Y.M.CHOOK REMARK 1 TITL RULES FOR NUCLEAR LOCALIZATION SEQUENCE RECOGNITION BY REMARK 1 TITL 2 KARYOPHERIN BETA 2. REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 126 543 2006 REMARK 1 REFN ISSN 0092-8674 REMARK 1 REFERENCE 4 REMARK 1 AUTH Y.M.CHOOK,G.BLOBEL REMARK 1 TITL STRUCTURE OF THE NUCLEAR TRANSPORT COMPLEX REMARK 1 TITL 2 KARYOPHERIN-BETA2-RAN X GPPNHP. REMARK 1 REF NATURE V. 399 230 1999 REMARK 1 REFN ISSN 0028-0836 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 99.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 60430 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.287 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3061 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3279 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.3650 REMARK 3 BIN FREE R VALUE SET COUNT : 157 REMARK 3 BIN FREE R VALUE : 0.3850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6821 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 148 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.11000 REMARK 3 B22 (A**2) : 0.37000 REMARK 3 B33 (A**2) : 1.75000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.238 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.201 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.182 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.740 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6967 ; 0.007 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9457 ; 1.223 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 853 ; 4.934 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 317 ;40.998 ;24.984 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1249 ;17.894 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;19.822 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1077 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5220 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 890 REMARK 3 ORIGIN FOR THE GROUP (A): 34.8450 38.0960 -3.7420 REMARK 3 T TENSOR REMARK 3 T11: 0.0480 T22: 0.1404 REMARK 3 T33: 0.0761 T12: 0.0247 REMARK 3 T13: 0.0074 T23: 0.0363 REMARK 3 L TENSOR REMARK 3 L11: 0.5613 L22: 0.3567 REMARK 3 L33: 0.0514 L12: -0.1140 REMARK 3 L13: -0.0727 L23: 0.1277 REMARK 3 S TENSOR REMARK 3 S11: 0.0960 S12: 0.0181 S13: 0.0708 REMARK 3 S21: -0.0270 S22: -0.0814 S23: -0.0525 REMARK 3 S31: -0.0101 S32: -0.0084 S33: -0.0147 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 507 B 526 REMARK 3 ORIGIN FOR THE GROUP (A): 33.5170 42.6880 4.6610 REMARK 3 T TENSOR REMARK 3 T11: 0.0835 T22: 0.1635 REMARK 3 T33: 0.1367 T12: -0.0141 REMARK 3 T13: 0.0385 T23: 0.0541 REMARK 3 L TENSOR REMARK 3 L11: 2.8715 L22: 1.8119 REMARK 3 L33: 0.1017 L12: 0.4639 REMARK 3 L13: 0.4513 L23: 0.1568 REMARK 3 S TENSOR REMARK 3 S11: 0.0610 S12: -0.0054 S13: 0.1294 REMARK 3 S21: 0.1183 S22: -0.0238 S23: 0.0768 REMARK 3 S31: 0.0003 S32: -0.0267 S33: -0.0372 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 4FDD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000072759. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60461 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 99.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.45300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M SUCCINIC ACID, 0.1 M HEPES PH 7.0 REMARK 280 AND 1% PEG MME 2000, VAPOR DIFFUSION, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 64.36000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 78.62750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 64.36000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 78.62750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 TYR A 3 REMARK 465 GLU A 4 REMARK 465 ASP A 359 REMARK 465 VAL A 360 REMARK 465 GLU A 361 REMARK 465 GLY A 362 REMARK 465 GLY A 363 REMARK 465 SER A 364 REMARK 465 GLY A 365 REMARK 465 GLY A 366 REMARK 465 ASP A 367 REMARK 465 ASP A 368 REMARK 465 THR A 369 REMARK 465 ILE A 370 REMARK 465 ARG B 498 REMARK 465 GLY B 499 REMARK 465 GLY B 500 REMARK 465 GLY B 501 REMARK 465 ASP B 502 REMARK 465 ARG B 503 REMARK 465 GLY B 504 REMARK 465 GLY B 505 REMARK 465 PHE B 506 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 184 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 78 -6.76 -148.27 REMARK 500 SER A 119 -74.31 -56.73 REMARK 500 LEU A 123 -102.42 16.31 REMARK 500 GLU A 161 -9.35 126.18 REMARK 500 ARG A 170 80.94 8.21 REMARK 500 ARG A 246 56.49 -118.61 REMARK 500 ARG A 391 -127.64 47.39 REMARK 500 CYS A 512 -124.78 52.50 REMARK 500 GLN A 534 -168.19 -74.89 REMARK 500 ASP A 582 -7.18 -56.51 REMARK 500 GLN A 598 -127.23 47.69 REMARK 500 CYS A 698 75.16 -154.19 REMARK 500 VAL A 750 -33.78 -138.79 REMARK 500 LEU A 884 40.10 -84.47 REMARK 500 ALA A 885 -31.93 -133.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2QMR RELATED DB: PDB REMARK 900 KARYOPHERIN BETA2/TRANSPORTIN REMARK 900 RELATED ID: 2OT8 RELATED DB: PDB REMARK 900 KARYOPHERIN BETA2/TRANSPORTIN-HNRNPM NLS COMPLEX REMARK 900 RELATED ID: 2H4M RELATED DB: PDB REMARK 900 KARYOPHERIN BETA2/TRANSPORTIN-M9NLS REMARK 900 RELATED ID: 1QBK RELATED DB: PDB REMARK 900 STRUCTURE OF THE KARYOPHERIN BETA2-RAN GPPNHP NUCLEAR TRANSPORT REMARK 900 COMPLEX DBREF 4FDD A 1 361 UNP Q92973 TNPO1_HUMAN 9 331 DBREF 4FDD A 367 890 UNP Q92973 TNPO1_HUMAN 375 898 DBREF 4FDD B 498 526 UNP P35637 FUS_HUMAN 498 526 SEQADV 4FDD GLY A 362 UNP Q92973 LINKER SEQADV 4FDD GLY A 363 UNP Q92973 LINKER SEQADV 4FDD SER A 364 UNP Q92973 LINKER SEQADV 4FDD GLY A 365 UNP Q92973 LINKER SEQADV 4FDD GLY A 366 UNP Q92973 LINKER SEQRES 1 A 852 MET GLU TYR GLU TRP LYS PRO ASP GLU GLN GLY LEU GLN SEQRES 2 A 852 GLN ILE LEU GLN LEU LEU LYS GLU SER GLN SER PRO ASP SEQRES 3 A 852 THR THR ILE GLN ARG THR VAL GLN GLN LYS LEU GLU GLN SEQRES 4 A 852 LEU ASN GLN TYR PRO ASP PHE ASN ASN TYR LEU ILE PHE SEQRES 5 A 852 VAL LEU THR LYS LEU LYS SER GLU ASP GLU PRO THR ARG SEQRES 6 A 852 SER LEU SER GLY LEU ILE LEU LYS ASN ASN VAL LYS ALA SEQRES 7 A 852 HIS PHE GLN ASN PHE PRO ASN GLY VAL THR ASP PHE ILE SEQRES 8 A 852 LYS SER GLU CYS LEU ASN ASN ILE GLY ASP SER SER PRO SEQRES 9 A 852 LEU ILE ARG ALA THR VAL GLY ILE LEU ILE THR THR ILE SEQRES 10 A 852 ALA SER LYS GLY GLU LEU GLN ASN TRP PRO ASP LEU LEU SEQRES 11 A 852 PRO LYS LEU CYS SER LEU LEU ASP SER GLU ASP TYR ASN SEQRES 12 A 852 THR CYS GLU GLY ALA PHE GLY ALA LEU GLN LYS ILE CYS SEQRES 13 A 852 GLU ASP SER ALA GLU ILE LEU ASP SER ASP VAL LEU ASP SEQRES 14 A 852 ARG PRO LEU ASN ILE MET ILE PRO LYS PHE LEU GLN PHE SEQRES 15 A 852 PHE LYS HIS SER SER PRO LYS ILE ARG SER HIS ALA VAL SEQRES 16 A 852 ALA CYS VAL ASN GLN PHE ILE ILE SER ARG THR GLN ALA SEQRES 17 A 852 LEU MET LEU HIS ILE ASP SER PHE ILE GLU ASN LEU PHE SEQRES 18 A 852 ALA LEU ALA GLY ASP GLU GLU PRO GLU VAL ARG LYS ASN SEQRES 19 A 852 VAL CYS ARG ALA LEU VAL MET LEU LEU GLU VAL ARG MET SEQRES 20 A 852 ASP ARG LEU LEU PRO HIS MET HIS ASN ILE VAL GLU TYR SEQRES 21 A 852 MET LEU GLN ARG THR GLN ASP GLN ASP GLU ASN VAL ALA SEQRES 22 A 852 LEU GLU ALA CYS GLU PHE TRP LEU THR LEU ALA GLU GLN SEQRES 23 A 852 PRO ILE CYS LYS ASP VAL LEU VAL ARG HIS LEU PRO LYS SEQRES 24 A 852 LEU ILE PRO VAL LEU VAL ASN GLY MET LYS TYR SER ASP SEQRES 25 A 852 ILE ASP ILE ILE LEU LEU LYS GLY ASP VAL GLU GLY GLY SEQRES 26 A 852 SER GLY GLY ASP ASP THR ILE SER ASP TRP ASN LEU ARG SEQRES 27 A 852 LYS CYS SER ALA ALA ALA LEU ASP VAL LEU ALA ASN VAL SEQRES 28 A 852 TYR ARG ASP GLU LEU LEU PRO HIS ILE LEU PRO LEU LEU SEQRES 29 A 852 LYS GLU LEU LEU PHE HIS HIS GLU TRP VAL VAL LYS GLU SEQRES 30 A 852 SER GLY ILE LEU VAL LEU GLY ALA ILE ALA GLU GLY CYS SEQRES 31 A 852 MET GLN GLY MET ILE PRO TYR LEU PRO GLU LEU ILE PRO SEQRES 32 A 852 HIS LEU ILE GLN CYS LEU SER ASP LYS LYS ALA LEU VAL SEQRES 33 A 852 ARG SER ILE THR CYS TRP THR LEU SER ARG TYR ALA HIS SEQRES 34 A 852 TRP VAL VAL SER GLN PRO PRO ASP THR TYR LEU LYS PRO SEQRES 35 A 852 LEU MET THR GLU LEU LEU LYS ARG ILE LEU ASP SER ASN SEQRES 36 A 852 LYS ARG VAL GLN GLU ALA ALA CYS SER ALA PHE ALA THR SEQRES 37 A 852 LEU GLU GLU GLU ALA CYS THR GLU LEU VAL PRO TYR LEU SEQRES 38 A 852 ALA TYR ILE LEU ASP THR LEU VAL PHE ALA PHE SER LYS SEQRES 39 A 852 TYR GLN HIS LYS ASN LEU LEU ILE LEU TYR ASP ALA ILE SEQRES 40 A 852 GLY THR LEU ALA ASP SER VAL GLY HIS HIS LEU ASN LYS SEQRES 41 A 852 PRO GLU TYR ILE GLN MET LEU MET PRO PRO LEU ILE GLN SEQRES 42 A 852 LYS TRP ASN MET LEU LYS ASP GLU ASP LYS ASP LEU PHE SEQRES 43 A 852 PRO LEU LEU GLU CYS LEU SER SER VAL ALA THR ALA LEU SEQRES 44 A 852 GLN SER GLY PHE LEU PRO TYR CYS GLU PRO VAL TYR GLN SEQRES 45 A 852 ARG CYS VAL ASN LEU VAL GLN LYS THR LEU ALA GLN ALA SEQRES 46 A 852 MET LEU ASN ASN ALA GLN PRO ASP GLN TYR GLU ALA PRO SEQRES 47 A 852 ASP LYS ASP PHE MET ILE VAL ALA LEU ASP LEU LEU SER SEQRES 48 A 852 GLY LEU ALA GLU GLY LEU GLY GLY ASN ILE GLU GLN LEU SEQRES 49 A 852 VAL ALA ARG SER ASN ILE LEU THR LEU MET TYR GLN CYS SEQRES 50 A 852 MET GLN ASP LYS MET PRO GLU VAL ARG GLN SER SER PHE SEQRES 51 A 852 ALA LEU LEU GLY ASP LEU THR LYS ALA CYS PHE GLN HIS SEQRES 52 A 852 VAL LYS PRO CYS ILE ALA ASP PHE MET PRO ILE LEU GLY SEQRES 53 A 852 THR ASN LEU ASN PRO GLU PHE ILE SER VAL CYS ASN ASN SEQRES 54 A 852 ALA THR TRP ALA ILE GLY GLU ILE SER ILE GLN MET GLY SEQRES 55 A 852 ILE GLU MET GLN PRO TYR ILE PRO MET VAL LEU HIS GLN SEQRES 56 A 852 LEU VAL GLU ILE ILE ASN ARG PRO ASN THR PRO LYS THR SEQRES 57 A 852 LEU LEU GLU ASN THR ALA ILE THR ILE GLY ARG LEU GLY SEQRES 58 A 852 TYR VAL CYS PRO GLN GLU VAL ALA PRO MET LEU GLN GLN SEQRES 59 A 852 PHE ILE ARG PRO TRP CYS THR SER LEU ARG ASN ILE ARG SEQRES 60 A 852 ASP ASN GLU GLU LYS ASP SER ALA PHE ARG GLY ILE CYS SEQRES 61 A 852 THR MET ILE SER VAL ASN PRO SER GLY VAL ILE GLN ASP SEQRES 62 A 852 PHE ILE PHE PHE CYS ASP ALA VAL ALA SER TRP ILE ASN SEQRES 63 A 852 PRO LYS ASP ASP LEU ARG ASP MET PHE CYS LYS ILE LEU SEQRES 64 A 852 HIS GLY PHE LYS ASN GLN VAL GLY ASP GLU ASN TRP ARG SEQRES 65 A 852 ARG PHE SER ASP GLN PHE PRO LEU PRO LEU LYS GLU ARG SEQRES 66 A 852 LEU ALA ALA PHE TYR GLY VAL SEQRES 1 B 29 ARG GLY GLY GLY ASP ARG GLY GLY PHE GLY PRO GLY LYS SEQRES 2 B 29 MET ASP SER ARG GLY GLU HIS ARG GLN ASP ARG ARG GLU SEQRES 3 B 29 ARG PRO TYR FORMUL 3 HOH *148(H2 O) HELIX 1 1 ASP A 8 GLN A 23 1 16 HELIX 2 2 ASP A 26 ASN A 41 1 16 HELIX 3 3 TYR A 43 LYS A 56 1 14 HELIX 4 4 ASP A 61 VAL A 76 1 16 HELIX 5 5 LYS A 77 ALA A 78 5 2 HELIX 6 6 HIS A 79 PHE A 83 5 5 HELIX 7 7 PRO A 84 ASN A 97 1 14 HELIX 8 8 SER A 103 GLY A 121 1 19 HELIX 9 9 ASP A 128 ASP A 138 1 11 HELIX 10 10 ASP A 141 ALA A 160 1 20 HELIX 11 11 GLU A 161 ASP A 166 1 6 HELIX 12 12 PRO A 171 LEU A 180 1 10 HELIX 13 13 SER A 187 GLN A 200 1 14 HELIX 14 14 THR A 206 LEU A 211 1 6 HELIX 15 15 HIS A 212 GLY A 225 1 14 HELIX 16 16 GLU A 228 ARG A 246 1 19 HELIX 17 17 ARG A 246 LEU A 251 1 6 HELIX 18 18 HIS A 253 GLN A 266 1 14 HELIX 19 19 ASP A 269 ALA A 284 1 16 HELIX 20 20 ILE A 288 VAL A 294 1 7 HELIX 21 21 HIS A 296 MET A 308 1 13 HELIX 22 22 SER A 311 GLY A 320 1 10 HELIX 23 23 ASN A 374 ARG A 391 1 18 HELIX 24 24 LEU A 394 PHE A 407 1 14 HELIX 25 25 GLU A 410 ILE A 424 1 15 HELIX 26 26 CYS A 428 ILE A 433 1 6 HELIX 27 27 TYR A 435 LEU A 447 1 13 HELIX 28 28 LYS A 451 TYR A 465 1 15 HELIX 29 29 TYR A 465 GLN A 472 1 8 HELIX 30 30 TYR A 477 LEU A 490 1 14 HELIX 31 31 ASN A 493 CYS A 512 1 20 HELIX 32 32 THR A 513 PRO A 517 5 5 HELIX 33 33 TYR A 518 TYR A 533 1 16 HELIX 34 34 GLN A 534 GLY A 553 1 20 HELIX 35 35 HIS A 554 ASN A 557 5 4 HELIX 36 36 LYS A 558 LEU A 576 1 19 HELIX 37 37 ASP A 582 GLN A 598 1 17 HELIX 38 38 SER A 599 PRO A 603 5 5 HELIX 39 39 TYR A 604 GLN A 629 1 26 HELIX 40 40 LYS A 638 GLY A 656 1 19 HELIX 41 41 ILE A 659 ARG A 665 1 7 HELIX 42 42 ASN A 667 MET A 676 1 10 HELIX 43 43 MET A 680 CYS A 698 1 19 HELIX 44 44 PHE A 699 PRO A 704 5 6 HELIX 45 45 CYS A 705 ASN A 716 1 12 HELIX 46 46 PHE A 721 GLY A 740 1 20 HELIX 47 47 ILE A 741 TYR A 746 5 6 HELIX 48 48 ILE A 747 ASN A 759 1 13 HELIX 49 49 PRO A 764 CYS A 782 1 19 HELIX 50 50 CYS A 782 ALA A 787 1 6 HELIX 51 51 MET A 789 ASN A 803 1 15 HELIX 52 52 ASN A 807 ASN A 824 1 18 HELIX 53 53 PRO A 825 GLN A 830 5 6 HELIX 54 54 ASP A 831 SER A 841 1 11 HELIX 55 55 LYS A 846 SER A 873 1 28 HELIX 56 56 ASP A 874 PHE A 876 5 3 HELIX 57 57 PRO A 877 PHE A 887 1 11 HELIX 58 58 SER B 513 ARG B 522 1 10 CRYST1 128.720 157.255 67.543 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007769 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006359 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014805 0.00000