data_4FGN # _entry.id 4FGN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4FGN pdb_00004fgn 10.2210/pdb4fgn/pdb NDB NA1830 ? ? RCSB RCSB072876 ? ? WWPDB D_1000072876 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2FUF 'apo-large T-antigen origin binding domain' unspecified PDB 2NTC 'large T-antigen origin binding domain in complex with subset of Site II DNA (P1, P3)' unspecified PDB 2ITL 'large T-antigen origin binding domain in complex with Site II DNA (P1-P4)' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4FGN _pdbx_database_status.recvd_initial_deposition_date 2012-06-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Meinke, G.' 1 'Bohm, A.' 2 'Bullock, P.A.' 3 # _citation.id primary _citation.title ;Analysis of the Costructure of the Simian Virus 40 T-Antigen Origin Binding Domain with Site I Reveals a Correlation between GAGGC Spacing and Spiral Assembly. ; _citation.journal_abbrev J.Virol. _citation.journal_volume 87 _citation.page_first 2923 _citation.page_last 2934 _citation.year 2013 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23269808 _citation.pdbx_database_id_DOI 10.1128/JVI.02549-12 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Meinke, G.' 1 ? primary 'Phelan, P.J.' 2 ? primary 'Harrison, C.J.' 3 ? primary 'Bullock, P.A.' 4 ? # _cell.entry_id 4FGN _cell.length_a 58.604 _cell.length_b 139.672 _cell.length_c 132.112 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FGN _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Large T antigen' 15240.476 2 3.6.4.- ? 'origin binding domain, UNP residues 131-260' ? 2 polymer syn 'Site I DNA' 6963.528 1 ? ? ? ? 3 polymer syn 'Site I DNA' 7158.603 1 ? ? ? ? 4 water nat water 18.015 3 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'LT, LT-AG' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSKVEDPKDFPSELLSFLSHAVFSNRTLACFAIYTTKEKAALLYKKIMEKYSVTFISRHNSYNHNILFFLTPHRHRVSAI NNYAQKLCTFSFLICKGVNKEYLMYSALTRDPFSVIEESLPGGLKEHDFNPE ; ;GSKVEDPKDFPSELLSFLSHAVFSNRTLACFAIYTTKEKAALLYKKIMEKYSVTFISRHNSYNHNILFFLTPHRHRVSAI NNYAQKLCTFSFLICKGVNKEYLMYSALTRDPFSVIEESLPGGLKEHDFNPE ; A,B ? 2 polydeoxyribonucleotide no no ;(DA)(DG)(DG)(DC)(DC)(DT)(DC)(DC)(DA)(DA)(DA)(DA)(DA)(DA)(DG)(DC)(DC)(DT)(DC)(DC) (DT)(DC)(DA) ; AGGCCTCCAAAAAAGCCTCCTCA Z ? 3 polydeoxyribonucleotide no no ;(DG)(DA)(DG)(DG)(DA)(DG)(DG)(DC)(DT)(DT)(DT)(DT)(DT)(DT)(DG)(DG)(DA)(DG)(DG)(DC) (DC)(DT)(DT) ; GAGGAGGCTTTTTTGGAGGCCTT Y ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 LYS n 1 4 VAL n 1 5 GLU n 1 6 ASP n 1 7 PRO n 1 8 LYS n 1 9 ASP n 1 10 PHE n 1 11 PRO n 1 12 SER n 1 13 GLU n 1 14 LEU n 1 15 LEU n 1 16 SER n 1 17 PHE n 1 18 LEU n 1 19 SER n 1 20 HIS n 1 21 ALA n 1 22 VAL n 1 23 PHE n 1 24 SER n 1 25 ASN n 1 26 ARG n 1 27 THR n 1 28 LEU n 1 29 ALA n 1 30 CYS n 1 31 PHE n 1 32 ALA n 1 33 ILE n 1 34 TYR n 1 35 THR n 1 36 THR n 1 37 LYS n 1 38 GLU n 1 39 LYS n 1 40 ALA n 1 41 ALA n 1 42 LEU n 1 43 LEU n 1 44 TYR n 1 45 LYS n 1 46 LYS n 1 47 ILE n 1 48 MET n 1 49 GLU n 1 50 LYS n 1 51 TYR n 1 52 SER n 1 53 VAL n 1 54 THR n 1 55 PHE n 1 56 ILE n 1 57 SER n 1 58 ARG n 1 59 HIS n 1 60 ASN n 1 61 SER n 1 62 TYR n 1 63 ASN n 1 64 HIS n 1 65 ASN n 1 66 ILE n 1 67 LEU n 1 68 PHE n 1 69 PHE n 1 70 LEU n 1 71 THR n 1 72 PRO n 1 73 HIS n 1 74 ARG n 1 75 HIS n 1 76 ARG n 1 77 VAL n 1 78 SER n 1 79 ALA n 1 80 ILE n 1 81 ASN n 1 82 ASN n 1 83 TYR n 1 84 ALA n 1 85 GLN n 1 86 LYS n 1 87 LEU n 1 88 CYS n 1 89 THR n 1 90 PHE n 1 91 SER n 1 92 PHE n 1 93 LEU n 1 94 ILE n 1 95 CYS n 1 96 LYS n 1 97 GLY n 1 98 VAL n 1 99 ASN n 1 100 LYS n 1 101 GLU n 1 102 TYR n 1 103 LEU n 1 104 MET n 1 105 TYR n 1 106 SER n 1 107 ALA n 1 108 LEU n 1 109 THR n 1 110 ARG n 1 111 ASP n 1 112 PRO n 1 113 PHE n 1 114 SER n 1 115 VAL n 1 116 ILE n 1 117 GLU n 1 118 GLU n 1 119 SER n 1 120 LEU n 1 121 PRO n 1 122 GLY n 1 123 GLY n 1 124 LEU n 1 125 LYS n 1 126 GLU n 1 127 HIS n 1 128 ASP n 1 129 PHE n 1 130 ASN n 1 131 PRO n 1 132 GLU n 2 1 DA n 2 2 DG n 2 3 DG n 2 4 DC n 2 5 DC n 2 6 DT n 2 7 DC n 2 8 DC n 2 9 DA n 2 10 DA n 2 11 DA n 2 12 DA n 2 13 DA n 2 14 DA n 2 15 DG n 2 16 DC n 2 17 DC n 2 18 DT n 2 19 DC n 2 20 DC n 2 21 DT n 2 22 DC n 2 23 DA n 3 1 DG n 3 2 DA n 3 3 DG n 3 4 DG n 3 5 DA n 3 6 DG n 3 7 DG n 3 8 DC n 3 9 DT n 3 10 DT n 3 11 DT n 3 12 DT n 3 13 DT n 3 14 DT n 3 15 DG n 3 16 DG n 3 17 DA n 3 18 DG n 3 19 DG n 3 20 DC n 3 21 DC n 3 22 DT n 3 23 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name SV40 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Simian virus 40' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10633 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Bl21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'Simian virus 40' ? 10633 'This DNA sequence is termed Site 1 in SV40' 3 1 sample ? ? 'Simian virus 40' ? 10633 'This DNA sequence is from sv40 site I' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP LT_SV40 P03070 1 ;KVEDPKDFPSELLSFLSHAVFSNRTLACFAIYTTKEKAALLYKKIMEKYSVTFISRHNSYNHNILFFLTPHRHRVSAINN YAQKLCTFSFLICKGVNKEYLMYSALTRDPFSVIEESLPGGLKEHDFNPE ; 131 ? 2 PDB 4FGN 4FGN 2 AGGCCTCCAAAAAAGCCTCCTCA ? ? 3 PDB 4FGN 4FGN 3 GAGGAGGCTTTTTTGGAGGCCTT ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4FGN A 3 ? 132 ? P03070 131 ? 260 ? 131 260 2 1 4FGN B 3 ? 132 ? P03070 131 ? 260 ? 131 260 3 2 4FGN Z 1 ? 23 ? 4FGN 1 ? 23 ? 1 23 4 3 4FGN Y 1 ? 23 ? 4FGN 1 ? 23 ? 1 23 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4FGN GLY A 1 ? UNP P03070 ? ? 'expression tag' 129 1 1 4FGN SER A 2 ? UNP P03070 ? ? 'expression tag' 130 2 2 4FGN GLY B 1 ? UNP P03070 ? ? 'expression tag' 129 3 2 4FGN SER B 2 ? UNP P03070 ? ? 'expression tag' 130 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4FGN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.03 _exptl_crystal.density_percent_sol 59.41 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1M sodium acetate pH 4.6, .2M ammonium sulfate, 30 % Peg 4000, 10 mM CaCl2, VAPOR DIFFUSION, HANGING DROP, temperature 291K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength 0.9792 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4FGN _reflns.observed_criterion_sigma_I 1.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 3.200 _reflns.number_obs 9304 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 3.20 _reflns_shell.d_res_low 3.31 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4FGN _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 8841 _refine.ls_number_reflns_all 9305 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 47.99 _refine.ls_d_res_high 3.20 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.191 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.188 _refine.ls_R_factor_R_free 0.267 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 444 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.971 _refine.correlation_coeff_Fo_to_Fc_free 0.952 _refine.B_iso_mean 137.11 _refine.aniso_B[1][1] -0.22000 _refine.aniso_B[2][2] -0.13000 _refine.aniso_B[3][3] 0.35000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model 2NTC _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.504 _refine.overall_SU_ML 0.517 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 73.091 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2027 _refine_hist.pdbx_number_atoms_nucleic_acid 937 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 2967 _refine_hist.d_res_high 3.20 _refine_hist.d_res_low 47.99 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.017 ? 3132 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.767 1.737 ? 4434 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 8.224 5.000 ? 248 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.384 23.061 ? 98 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 20.750 15.000 ? 345 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 26.134 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.102 0.200 ? 448 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.021 ? 2062 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.20 _refine_ls_shell.d_res_low 3.28 _refine_ls_shell.number_reflns_R_work 563 _refine_ls_shell.R_factor_R_work 0.3020 _refine_ls_shell.percent_reflns_obs 97.69 _refine_ls_shell.R_factor_R_free 0.2660 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 29 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4FGN _struct.title 'Crystal structure of the SV40 large T-antigen origin bining domain bound to Site I DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4FGN _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text 'origin binding domain, DNA BINDING PROTEIN-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 13 ? LEU A 18 ? GLU A 141 LEU A 146 5 ? 6 HELX_P HELX_P2 2 THR A 36 ? TYR A 51 ? THR A 164 TYR A 179 1 ? 16 HELX_P HELX_P3 3 ARG A 76 ? LYS A 86 ? ARG A 204 LYS A 214 1 ? 11 HELX_P HELX_P4 4 LYS A 100 ? ARG A 110 ? LYS A 228 ARG A 238 1 ? 11 HELX_P HELX_P5 5 GLY A 122 ? GLU A 126 ? GLY A 250 GLU A 254 5 ? 5 HELX_P HELX_P6 6 PRO B 11 ? LEU B 18 ? PRO B 139 LEU B 146 5 ? 8 HELX_P HELX_P7 7 ALA B 40 ? SER B 52 ? ALA B 168 SER B 180 1 ? 13 HELX_P HELX_P8 8 ARG B 76 ? CYS B 88 ? ARG B 204 CYS B 216 1 ? 13 HELX_P HELX_P9 9 LYS B 100 ? ARG B 110 ? LYS B 228 ARG B 238 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DA 1 N1 ? ? ? 1_555 D DT 22 N3 ? ? Z DA 1 Y DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DA 1 N6 ? ? ? 1_555 D DT 22 O4 ? ? Z DA 1 Y DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 21 N3 ? ? Z DG 2 Y DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 21 O2 ? ? Z DG 2 Y DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 21 N4 ? ? Z DG 2 Y DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 20 N3 ? ? Z DG 3 Y DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 20 O2 ? ? Z DG 3 Y DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 20 N4 ? ? Z DG 3 Y DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DC 4 N3 ? ? ? 1_555 D DG 19 N1 ? ? Z DC 4 Y DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DC 4 N4 ? ? ? 1_555 D DG 19 O6 ? ? Z DC 4 Y DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DC 4 O2 ? ? ? 1_555 D DG 19 N2 ? ? Z DC 4 Y DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 18 N1 ? ? Z DC 5 Y DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D DG 18 O6 ? ? Z DC 5 Y DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D DG 18 N2 ? ? Z DC 5 Y DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 17 N1 ? ? Z DT 6 Y DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 17 N6 ? ? Z DT 6 Y DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 16 N1 ? ? Z DC 7 Y DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 16 O6 ? ? Z DC 7 Y DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 16 N2 ? ? Z DC 7 Y DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 15 N1 ? ? Z DC 8 Y DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 15 O6 ? ? Z DC 8 Y DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 15 N2 ? ? Z DC 8 Y DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 14 N3 ? ? Z DA 9 Y DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DT 14 O4 ? ? Z DA 9 Y DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DT 13 N3 ? ? Z DA 10 Y DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DA 10 N6 ? ? ? 1_555 D DT 13 O4 ? ? Z DA 10 Y DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DA 11 N1 ? ? ? 1_555 D DT 12 N3 ? ? Z DA 11 Y DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DA 11 N6 ? ? ? 1_555 D DT 12 O4 ? ? Z DA 11 Y DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DA 12 N1 ? ? ? 1_555 D DT 11 N3 ? ? Z DA 12 Y DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DA 12 N6 ? ? ? 1_555 D DT 11 O4 ? ? Z DA 12 Y DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DA 13 N1 ? ? ? 1_555 D DT 10 N3 ? ? Z DA 13 Y DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DA 13 N6 ? ? ? 1_555 D DT 10 O4 ? ? Z DA 13 Y DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DA 14 N1 ? ? ? 1_555 D DT 9 N3 ? ? Z DA 14 Y DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DA 14 N6 ? ? ? 1_555 D DT 9 O4 ? ? Z DA 14 Y DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 15 N1 ? ? ? 1_555 D DC 8 N3 ? ? Z DG 15 Y DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 15 N2 ? ? ? 1_555 D DC 8 O2 ? ? Z DG 15 Y DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 15 O6 ? ? ? 1_555 D DC 8 N4 ? ? Z DG 15 Y DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 16 N3 ? ? ? 1_555 D DG 7 N1 ? ? Z DC 16 Y DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DC 16 N4 ? ? ? 1_555 D DG 7 O6 ? ? Z DC 16 Y DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 16 O2 ? ? ? 1_555 D DG 7 N2 ? ? Z DC 16 Y DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 17 N3 ? ? ? 1_555 D DG 6 N1 ? ? Z DC 17 Y DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 17 N4 ? ? ? 1_555 D DG 6 O6 ? ? Z DC 17 Y DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DC 17 O2 ? ? ? 1_555 D DG 6 N2 ? ? Z DC 17 Y DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DT 18 N3 ? ? ? 1_555 D DA 5 N1 ? ? Z DT 18 Y DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DT 18 O4 ? ? ? 1_555 D DA 5 N6 ? ? Z DT 18 Y DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DC 19 N3 ? ? ? 1_555 D DG 4 N1 ? ? Z DC 19 Y DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DC 19 N4 ? ? ? 1_555 D DG 4 O6 ? ? Z DC 19 Y DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DC 19 O2 ? ? ? 1_555 D DG 4 N2 ? ? Z DC 19 Y DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DC 20 O2 ? ? ? 1_555 D DG 3 N2 ? ? Z DC 20 Y DG 3 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog50 hydrog ? ? C DT 21 N3 ? ? ? 1_555 D DA 2 N1 ? ? Z DT 21 Y DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DT 21 O4 ? ? ? 1_555 D DA 2 N6 ? ? Z DT 21 Y DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DC 22 N4 ? ? ? 1_555 D DG 1 O6 ? ? Z DC 22 Y DG 1 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 111 A . ? ASP 239 A PRO 112 A ? PRO 240 A 1 12.73 2 ASP 111 B . ? ASP 239 B PRO 112 B ? PRO 240 B 1 0.19 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 93 ? GLY A 97 ? LEU A 221 GLY A 225 A 2 LEU A 28 ? THR A 35 ? LEU A 156 THR A 163 A 3 ASN A 65 ? HIS A 75 ? ASN A 193 HIS A 203 A 4 PHE A 55 ? ASN A 60 ? PHE A 183 ASN A 188 A 5 VAL A 115 ? GLU A 118 ? VAL A 243 GLU A 246 B 1 LEU B 28 ? THR B 35 ? LEU B 156 THR B 163 B 2 ASN B 65 ? HIS B 75 ? ASN B 193 HIS B 203 B 3 PHE B 55 ? ASN B 60 ? PHE B 183 ASN B 188 B 4 SER B 114 ? GLU B 118 ? SER B 242 GLU B 246 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 96 ? O LYS A 224 N ALA A 32 ? N ALA A 160 A 2 3 N LEU A 28 ? N LEU A 156 O HIS A 75 ? O HIS A 203 A 3 4 O ILE A 66 ? O ILE A 194 N HIS A 59 ? N HIS A 187 A 4 5 N ARG A 58 ? N ARG A 186 O ILE A 116 ? O ILE A 244 B 1 2 N LEU B 28 ? N LEU B 156 O HIS B 75 ? O HIS B 203 B 2 3 O PHE B 68 ? O PHE B 196 N SER B 57 ? N SER B 185 B 3 4 N ASN B 60 ? N ASN B 188 O SER B 114 ? O SER B 242 # _database_PDB_matrix.entry_id 4FGN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4FGN _atom_sites.fract_transf_matrix[1][1] 0.017064 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007160 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007569 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 129 ? ? ? A . n A 1 2 SER 2 130 ? ? ? A . n A 1 3 LYS 3 131 ? ? ? A . n A 1 4 VAL 4 132 ? ? ? A . n A 1 5 GLU 5 133 133 GLU GLU A . n A 1 6 ASP 6 134 134 ASP ASP A . n A 1 7 PRO 7 135 135 PRO PRO A . n A 1 8 LYS 8 136 136 LYS LYS A . n A 1 9 ASP 9 137 137 ASP ASP A . n A 1 10 PHE 10 138 138 PHE PHE A . n A 1 11 PRO 11 139 139 PRO PRO A . n A 1 12 SER 12 140 140 SER SER A . n A 1 13 GLU 13 141 141 GLU GLU A . n A 1 14 LEU 14 142 142 LEU LEU A . n A 1 15 LEU 15 143 143 LEU LEU A . n A 1 16 SER 16 144 144 SER SER A . n A 1 17 PHE 17 145 145 PHE PHE A . n A 1 18 LEU 18 146 146 LEU LEU A . n A 1 19 SER 19 147 147 SER SER A . n A 1 20 HIS 20 148 148 HIS HIS A . n A 1 21 ALA 21 149 149 ALA ALA A . n A 1 22 VAL 22 150 150 VAL VAL A . n A 1 23 PHE 23 151 151 PHE PHE A . n A 1 24 SER 24 152 152 SER SER A . n A 1 25 ASN 25 153 153 ASN ASN A . n A 1 26 ARG 26 154 154 ARG ARG A . n A 1 27 THR 27 155 155 THR THR A . n A 1 28 LEU 28 156 156 LEU LEU A . n A 1 29 ALA 29 157 157 ALA ALA A . n A 1 30 CYS 30 158 158 CYS CYS A . n A 1 31 PHE 31 159 159 PHE PHE A . n A 1 32 ALA 32 160 160 ALA ALA A . n A 1 33 ILE 33 161 161 ILE ILE A . n A 1 34 TYR 34 162 162 TYR TYR A . n A 1 35 THR 35 163 163 THR THR A . n A 1 36 THR 36 164 164 THR THR A . n A 1 37 LYS 37 165 165 LYS LYS A . n A 1 38 GLU 38 166 166 GLU GLU A . n A 1 39 LYS 39 167 167 LYS LYS A . n A 1 40 ALA 40 168 168 ALA ALA A . n A 1 41 ALA 41 169 169 ALA ALA A . n A 1 42 LEU 42 170 170 LEU LEU A . n A 1 43 LEU 43 171 171 LEU LEU A . n A 1 44 TYR 44 172 172 TYR TYR A . n A 1 45 LYS 45 173 173 LYS LYS A . n A 1 46 LYS 46 174 174 LYS LYS A . n A 1 47 ILE 47 175 175 ILE ILE A . n A 1 48 MET 48 176 176 MET MET A . n A 1 49 GLU 49 177 177 GLU GLU A . n A 1 50 LYS 50 178 178 LYS LYS A . n A 1 51 TYR 51 179 179 TYR TYR A . n A 1 52 SER 52 180 180 SER SER A . n A 1 53 VAL 53 181 181 VAL VAL A . n A 1 54 THR 54 182 182 THR THR A . n A 1 55 PHE 55 183 183 PHE PHE A . n A 1 56 ILE 56 184 184 ILE ILE A . n A 1 57 SER 57 185 185 SER SER A . n A 1 58 ARG 58 186 186 ARG ARG A . n A 1 59 HIS 59 187 187 HIS HIS A . n A 1 60 ASN 60 188 188 ASN ASN A . n A 1 61 SER 61 189 189 SER SER A . n A 1 62 TYR 62 190 190 TYR TYR A . n A 1 63 ASN 63 191 191 ASN ASN A . n A 1 64 HIS 64 192 192 HIS HIS A . n A 1 65 ASN 65 193 193 ASN ASN A . n A 1 66 ILE 66 194 194 ILE ILE A . n A 1 67 LEU 67 195 195 LEU LEU A . n A 1 68 PHE 68 196 196 PHE PHE A . n A 1 69 PHE 69 197 197 PHE PHE A . n A 1 70 LEU 70 198 198 LEU LEU A . n A 1 71 THR 71 199 199 THR THR A . n A 1 72 PRO 72 200 200 PRO PRO A . n A 1 73 HIS 73 201 201 HIS HIS A . n A 1 74 ARG 74 202 202 ARG ARG A . n A 1 75 HIS 75 203 203 HIS HIS A . n A 1 76 ARG 76 204 204 ARG ARG A . n A 1 77 VAL 77 205 205 VAL VAL A . n A 1 78 SER 78 206 206 SER SER A . n A 1 79 ALA 79 207 207 ALA ALA A . n A 1 80 ILE 80 208 208 ILE ILE A . n A 1 81 ASN 81 209 209 ASN ASN A . n A 1 82 ASN 82 210 210 ASN ASN A . n A 1 83 TYR 83 211 211 TYR TYR A . n A 1 84 ALA 84 212 212 ALA ALA A . n A 1 85 GLN 85 213 213 GLN GLN A . n A 1 86 LYS 86 214 214 LYS LYS A . n A 1 87 LEU 87 215 215 LEU LEU A . n A 1 88 CYS 88 216 216 CYS CYS A . n A 1 89 THR 89 217 217 THR THR A . n A 1 90 PHE 90 218 218 PHE PHE A . n A 1 91 SER 91 219 219 SER SER A . n A 1 92 PHE 92 220 220 PHE PHE A . n A 1 93 LEU 93 221 221 LEU LEU A . n A 1 94 ILE 94 222 222 ILE ILE A . n A 1 95 CYS 95 223 223 CYS CYS A . n A 1 96 LYS 96 224 224 LYS LYS A . n A 1 97 GLY 97 225 225 GLY GLY A . n A 1 98 VAL 98 226 226 VAL VAL A . n A 1 99 ASN 99 227 227 ASN ASN A . n A 1 100 LYS 100 228 228 LYS LYS A . n A 1 101 GLU 101 229 229 GLU GLU A . n A 1 102 TYR 102 230 230 TYR TYR A . n A 1 103 LEU 103 231 231 LEU LEU A . n A 1 104 MET 104 232 232 MET MET A . n A 1 105 TYR 105 233 233 TYR TYR A . n A 1 106 SER 106 234 234 SER SER A . n A 1 107 ALA 107 235 235 ALA ALA A . n A 1 108 LEU 108 236 236 LEU LEU A . n A 1 109 THR 109 237 237 THR THR A . n A 1 110 ARG 110 238 238 ARG ARG A . n A 1 111 ASP 111 239 239 ASP ASP A . n A 1 112 PRO 112 240 240 PRO PRO A . n A 1 113 PHE 113 241 241 PHE PHE A . n A 1 114 SER 114 242 242 SER SER A . n A 1 115 VAL 115 243 243 VAL VAL A . n A 1 116 ILE 116 244 244 ILE ILE A . n A 1 117 GLU 117 245 245 GLU GLU A . n A 1 118 GLU 118 246 246 GLU GLU A . n A 1 119 SER 119 247 247 SER SER A . n A 1 120 LEU 120 248 248 LEU LEU A . n A 1 121 PRO 121 249 249 PRO PRO A . n A 1 122 GLY 122 250 250 GLY GLY A . n A 1 123 GLY 123 251 251 GLY GLY A . n A 1 124 LEU 124 252 252 LEU LEU A . n A 1 125 LYS 125 253 253 LYS LYS A . n A 1 126 GLU 126 254 254 GLU GLU A . n A 1 127 HIS 127 255 255 HIS HIS A . n A 1 128 ASP 128 256 256 ASP ASP A . n A 1 129 PHE 129 257 257 PHE PHE A . n A 1 130 ASN 130 258 258 ASN ASN A . n A 1 131 PRO 131 259 ? ? ? A . n A 1 132 GLU 132 260 ? ? ? A . n B 1 1 GLY 1 129 ? ? ? B . n B 1 2 SER 2 130 ? ? ? B . n B 1 3 LYS 3 131 ? ? ? B . n B 1 4 VAL 4 132 ? ? ? B . n B 1 5 GLU 5 133 ? ? ? B . n B 1 6 ASP 6 134 134 ASP ASP B . n B 1 7 PRO 7 135 135 PRO PRO B . n B 1 8 LYS 8 136 136 LYS LYS B . n B 1 9 ASP 9 137 137 ASP ASP B . n B 1 10 PHE 10 138 138 PHE PHE B . n B 1 11 PRO 11 139 139 PRO PRO B . n B 1 12 SER 12 140 140 SER SER B . n B 1 13 GLU 13 141 141 GLU GLU B . n B 1 14 LEU 14 142 142 LEU LEU B . n B 1 15 LEU 15 143 143 LEU LEU B . n B 1 16 SER 16 144 144 SER SER B . n B 1 17 PHE 17 145 145 PHE PHE B . n B 1 18 LEU 18 146 146 LEU LEU B . n B 1 19 SER 19 147 147 SER SER B . n B 1 20 HIS 20 148 148 HIS HIS B . n B 1 21 ALA 21 149 149 ALA ALA B . n B 1 22 VAL 22 150 150 VAL VAL B . n B 1 23 PHE 23 151 151 PHE PHE B . n B 1 24 SER 24 152 152 SER SER B . n B 1 25 ASN 25 153 153 ASN ASN B . n B 1 26 ARG 26 154 154 ARG ARG B . n B 1 27 THR 27 155 155 THR THR B . n B 1 28 LEU 28 156 156 LEU LEU B . n B 1 29 ALA 29 157 157 ALA ALA B . n B 1 30 CYS 30 158 158 CYS CYS B . n B 1 31 PHE 31 159 159 PHE PHE B . n B 1 32 ALA 32 160 160 ALA ALA B . n B 1 33 ILE 33 161 161 ILE ILE B . n B 1 34 TYR 34 162 162 TYR TYR B . n B 1 35 THR 35 163 163 THR THR B . n B 1 36 THR 36 164 164 THR THR B . n B 1 37 LYS 37 165 165 LYS LYS B . n B 1 38 GLU 38 166 166 GLU GLU B . n B 1 39 LYS 39 167 167 LYS LYS B . n B 1 40 ALA 40 168 168 ALA ALA B . n B 1 41 ALA 41 169 169 ALA ALA B . n B 1 42 LEU 42 170 170 LEU LEU B . n B 1 43 LEU 43 171 171 LEU LEU B . n B 1 44 TYR 44 172 172 TYR TYR B . n B 1 45 LYS 45 173 173 LYS LYS B . n B 1 46 LYS 46 174 174 LYS LYS B . n B 1 47 ILE 47 175 175 ILE ILE B . n B 1 48 MET 48 176 176 MET MET B . n B 1 49 GLU 49 177 177 GLU GLU B . n B 1 50 LYS 50 178 178 LYS LYS B . n B 1 51 TYR 51 179 179 TYR TYR B . n B 1 52 SER 52 180 180 SER SER B . n B 1 53 VAL 53 181 181 VAL VAL B . n B 1 54 THR 54 182 182 THR THR B . n B 1 55 PHE 55 183 183 PHE PHE B . n B 1 56 ILE 56 184 184 ILE ILE B . n B 1 57 SER 57 185 185 SER SER B . n B 1 58 ARG 58 186 186 ARG ARG B . n B 1 59 HIS 59 187 187 HIS HIS B . n B 1 60 ASN 60 188 188 ASN ASN B . n B 1 61 SER 61 189 189 SER SER B . n B 1 62 TYR 62 190 190 TYR TYR B . n B 1 63 ASN 63 191 191 ASN ASN B . n B 1 64 HIS 64 192 192 HIS HIS B . n B 1 65 ASN 65 193 193 ASN ASN B . n B 1 66 ILE 66 194 194 ILE ILE B . n B 1 67 LEU 67 195 195 LEU LEU B . n B 1 68 PHE 68 196 196 PHE PHE B . n B 1 69 PHE 69 197 197 PHE PHE B . n B 1 70 LEU 70 198 198 LEU LEU B . n B 1 71 THR 71 199 199 THR THR B . n B 1 72 PRO 72 200 200 PRO PRO B . n B 1 73 HIS 73 201 201 HIS HIS B . n B 1 74 ARG 74 202 202 ARG ARG B . n B 1 75 HIS 75 203 203 HIS HIS B . n B 1 76 ARG 76 204 204 ARG ARG B . n B 1 77 VAL 77 205 205 VAL VAL B . n B 1 78 SER 78 206 206 SER SER B . n B 1 79 ALA 79 207 207 ALA ALA B . n B 1 80 ILE 80 208 208 ILE ILE B . n B 1 81 ASN 81 209 209 ASN ASN B . n B 1 82 ASN 82 210 210 ASN ASN B . n B 1 83 TYR 83 211 211 TYR TYR B . n B 1 84 ALA 84 212 212 ALA ALA B . n B 1 85 GLN 85 213 213 GLN GLN B . n B 1 86 LYS 86 214 214 LYS LYS B . n B 1 87 LEU 87 215 215 LEU LEU B . n B 1 88 CYS 88 216 216 CYS CYS B . n B 1 89 THR 89 217 217 THR THR B . n B 1 90 PHE 90 218 218 PHE PHE B . n B 1 91 SER 91 219 219 SER SER B . n B 1 92 PHE 92 220 220 PHE PHE B . n B 1 93 LEU 93 221 221 LEU LEU B . n B 1 94 ILE 94 222 222 ILE ILE B . n B 1 95 CYS 95 223 223 CYS CYS B . n B 1 96 LYS 96 224 224 LYS LYS B . n B 1 97 GLY 97 225 225 GLY GLY B . n B 1 98 VAL 98 226 226 VAL VAL B . n B 1 99 ASN 99 227 227 ASN ASN B . n B 1 100 LYS 100 228 228 LYS LYS B . n B 1 101 GLU 101 229 229 GLU GLU B . n B 1 102 TYR 102 230 230 TYR TYR B . n B 1 103 LEU 103 231 231 LEU LEU B . n B 1 104 MET 104 232 232 MET MET B . n B 1 105 TYR 105 233 233 TYR TYR B . n B 1 106 SER 106 234 234 SER SER B . n B 1 107 ALA 107 235 235 ALA ALA B . n B 1 108 LEU 108 236 236 LEU LEU B . n B 1 109 THR 109 237 237 THR THR B . n B 1 110 ARG 110 238 238 ARG ARG B . n B 1 111 ASP 111 239 239 ASP ASP B . n B 1 112 PRO 112 240 240 PRO PRO B . n B 1 113 PHE 113 241 241 PHE PHE B . n B 1 114 SER 114 242 242 SER SER B . n B 1 115 VAL 115 243 243 VAL VAL B . n B 1 116 ILE 116 244 244 ILE ILE B . n B 1 117 GLU 117 245 245 GLU GLU B . n B 1 118 GLU 118 246 246 GLU GLU B . n B 1 119 SER 119 247 247 SER SER B . n B 1 120 LEU 120 248 248 LEU LEU B . n B 1 121 PRO 121 249 249 PRO PRO B . n B 1 122 GLY 122 250 250 GLY GLY B . n B 1 123 GLY 123 251 251 GLY GLY B . n B 1 124 LEU 124 252 252 LEU LEU B . n B 1 125 LYS 125 253 253 LYS LYS B . n B 1 126 GLU 126 254 254 GLU GLU B . n B 1 127 HIS 127 255 255 HIS HIS B . n B 1 128 ASP 128 256 256 ASP ASP B . n B 1 129 PHE 129 257 257 PHE PHE B . n B 1 130 ASN 130 258 ? ? ? B . n B 1 131 PRO 131 259 ? ? ? B . n B 1 132 GLU 132 260 ? ? ? B . n C 2 1 DA 1 1 1 DA DA Z . n C 2 2 DG 2 2 2 DG DG Z . n C 2 3 DG 3 3 3 DG DG Z . n C 2 4 DC 4 4 4 DC DC Z . n C 2 5 DC 5 5 5 DC DC Z . n C 2 6 DT 6 6 6 DT DT Z . n C 2 7 DC 7 7 7 DC DC Z . n C 2 8 DC 8 8 8 DC DC Z . n C 2 9 DA 9 9 9 DA DA Z . n C 2 10 DA 10 10 10 DA DA Z . n C 2 11 DA 11 11 11 DA DA Z . n C 2 12 DA 12 12 12 DA DA Z . n C 2 13 DA 13 13 13 DA DA Z . n C 2 14 DA 14 14 14 DA DA Z . n C 2 15 DG 15 15 15 DG DG Z . n C 2 16 DC 16 16 16 DC DC Z . n C 2 17 DC 17 17 17 DC DC Z . n C 2 18 DT 18 18 18 DT DT Z . n C 2 19 DC 19 19 19 DC DC Z . n C 2 20 DC 20 20 20 DC DC Z . n C 2 21 DT 21 21 21 DT DT Z . n C 2 22 DC 22 22 22 DC DC Z . n C 2 23 DA 23 23 23 DA DA Z . n D 3 1 DG 1 1 1 DG DG Y . n D 3 2 DA 2 2 2 DA DA Y . n D 3 3 DG 3 3 3 DG DG Y . n D 3 4 DG 4 4 4 DG DG Y . n D 3 5 DA 5 5 5 DA DA Y . n D 3 6 DG 6 6 6 DG DG Y . n D 3 7 DG 7 7 7 DG DG Y . n D 3 8 DC 8 8 8 DC DC Y . n D 3 9 DT 9 9 9 DT DT Y . n D 3 10 DT 10 10 10 DT DT Y . n D 3 11 DT 11 11 11 DT DT Y . n D 3 12 DT 12 12 12 DT DT Y . n D 3 13 DT 13 13 13 DT DT Y . n D 3 14 DT 14 14 14 DT DT Y . n D 3 15 DG 15 15 15 DG DG Y . n D 3 16 DG 16 16 16 DG DG Y . n D 3 17 DA 17 17 17 DA DA Y . n D 3 18 DG 18 18 18 DG DG Y . n D 3 19 DG 19 19 19 DG DG Y . n D 3 20 DC 20 20 20 DC DC Y . n D 3 21 DC 21 21 21 DC DC Y . n D 3 22 DT 22 22 22 DT DT Y . n D 3 23 DT 23 23 23 DT DT Y . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 301 1 HOH HOH A . E 4 HOH 2 302 2 HOH HOH A . F 4 HOH 1 301 3 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4860 ? 1 MORE -34 ? 1 'SSA (A^2)' 19360 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 301 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-01-23 2 'Structure model' 1 1 2013-02-27 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 1.5594 42.2545 -0.2878 0.3479 0.6030 0.8232 -0.0302 0.2384 -0.0679 4.3163 14.3332 11.8625 -2.8324 -1.0743 2.3666 0.0745 -0.2827 -0.9794 0.8123 -0.7172 0.6496 0.5555 -0.3503 0.6427 'X-RAY DIFFRACTION' 2 ? refined 3.1383 5.6793 -17.5268 1.2112 1.5418 0.7115 -0.4074 -0.4374 -0.1961 10.8722 11.1175 3.7342 2.9635 1.3241 0.2369 0.9076 -0.6183 -0.5681 -0.2245 -0.7337 1.4421 1.6383 -1.9481 -0.1738 'X-RAY DIFFRACTION' 3 ? refined 17.6876 27.3756 -20.0936 1.0534 0.6879 0.7649 0.2711 0.1618 -0.0419 4.5856 8.9030 3.2417 -5.0544 -0.7161 3.2412 0.6374 0.3198 0.9739 -1.2909 -0.4605 -1.7934 -0.3216 0.3427 -0.1769 'X-RAY DIFFRACTION' 4 ? refined 16.4447 29.9636 -20.6853 0.9832 0.6251 0.7814 0.2006 0.2339 -0.0533 2.5926 4.0713 4.1954 -2.6339 1.4469 0.4706 0.9031 0.5819 0.0307 -1.4441 -0.7736 0.2976 -0.2765 0.1121 -0.1295 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 133 ? ? A 258 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 134 ? ? B 257 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 Z 1 ? ? Z 23 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 Y 1 ? ? Y 23 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.6.0117 ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 HIS _pdbx_validate_rmsd_bond.auth_seq_id_1 148 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 HIS _pdbx_validate_rmsd_bond.auth_seq_id_2 148 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.413 _pdbx_validate_rmsd_bond.bond_target_value 1.354 _pdbx_validate_rmsd_bond.bond_deviation 0.059 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.009 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" Z DA 9 ? ? "O3'" Z DA 9 ? ? P Z DA 10 ? ? 127.53 119.70 7.83 1.20 Y 2 1 "C3'" Z DA 13 ? ? "O3'" Z DA 13 ? ? P Z DA 14 ? ? 127.20 119.70 7.50 1.20 Y 3 1 "C3'" Z DA 14 ? ? "O3'" Z DA 14 ? ? P Z DG 15 ? ? 129.43 119.70 9.73 1.20 Y 4 1 "C3'" Z DC 16 ? ? "O3'" Z DC 16 ? ? P Z DC 17 ? ? 111.32 119.70 -8.38 1.20 Y 5 1 "C3'" Y DA 2 ? ? "O3'" Y DA 2 ? ? P Y DG 3 ? ? 111.60 119.70 -8.10 1.20 Y 6 1 "C3'" Y DT 9 ? ? "O3'" Y DT 9 ? ? P Y DT 10 ? ? 128.87 119.70 9.17 1.20 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 135 ? ? -37.48 130.90 2 1 SER A 140 ? ? -1.63 -66.13 3 1 ALA A 149 ? ? -52.32 105.22 4 1 PHE A 151 ? ? -105.55 47.07 5 1 THR A 163 ? ? -165.28 -167.31 6 1 SER A 189 ? ? -160.08 98.49 7 1 LEU A 215 ? ? -89.57 31.22 8 1 CYS A 216 ? ? -168.08 98.03 9 1 PHE A 218 ? ? -137.72 -36.56 10 1 LEU A 221 ? ? -161.15 119.82 11 1 ILE A 244 ? ? -126.42 -80.60 12 1 SER A 247 ? ? -55.44 -86.80 13 1 SER B 140 ? ? -24.99 -57.72 14 1 ARG B 154 ? ? -38.27 120.48 15 1 LYS B 173 ? ? -75.82 -78.88 16 1 ASN B 191 ? ? 46.66 18.05 17 1 HIS B 192 ? ? -112.28 -154.54 18 1 SER B 219 ? ? 69.93 -117.26 19 1 LEU B 221 ? ? -174.48 104.98 20 1 CYS B 223 ? ? -169.79 119.10 21 1 MET B 232 ? ? -65.00 -72.33 22 1 PRO B 249 ? ? -34.16 127.40 23 1 LYS B 253 ? ? -83.48 -128.46 24 1 GLU B 254 ? ? -106.73 -67.40 25 1 HIS B 255 ? ? -2.91 -56.43 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 PHE A 257 ? ? ASN A 258 ? ? 149.86 2 1 THR B 217 ? ? PHE B 218 ? ? 148.93 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 136 ? CG ? A LYS 8 CG 2 1 Y 1 A LYS 136 ? CD ? A LYS 8 CD 3 1 Y 1 A LYS 136 ? CE ? A LYS 8 CE 4 1 Y 1 A LYS 136 ? NZ ? A LYS 8 NZ 5 1 Y 1 B LYS 136 ? CG ? B LYS 8 CG 6 1 Y 1 B LYS 136 ? CD ? B LYS 8 CD 7 1 Y 1 B LYS 136 ? CE ? B LYS 8 CE 8 1 Y 1 B LYS 136 ? NZ ? B LYS 8 NZ 9 1 Y 1 B LYS 167 ? CG ? B LYS 39 CG 10 1 Y 1 B LYS 167 ? CD ? B LYS 39 CD 11 1 Y 1 B LYS 167 ? CE ? B LYS 39 CE 12 1 Y 1 B LYS 167 ? NZ ? B LYS 39 NZ 13 1 Y 1 B LYS 214 ? CG ? B LYS 86 CG 14 1 Y 1 B LYS 214 ? CD ? B LYS 86 CD 15 1 Y 1 B LYS 214 ? CE ? B LYS 86 CE 16 1 Y 1 B LYS 214 ? NZ ? B LYS 86 NZ 17 1 Y 1 B LYS 228 ? CG ? B LYS 100 CG 18 1 Y 1 B LYS 228 ? CD ? B LYS 100 CD 19 1 Y 1 B LYS 228 ? CE ? B LYS 100 CE 20 1 Y 1 B LYS 228 ? NZ ? B LYS 100 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 129 ? A GLY 1 2 1 Y 1 A SER 130 ? A SER 2 3 1 Y 1 A LYS 131 ? A LYS 3 4 1 Y 1 A VAL 132 ? A VAL 4 5 1 Y 1 A PRO 259 ? A PRO 131 6 1 Y 1 A GLU 260 ? A GLU 132 7 1 Y 1 B GLY 129 ? B GLY 1 8 1 Y 1 B SER 130 ? B SER 2 9 1 Y 1 B LYS 131 ? B LYS 3 10 1 Y 1 B VAL 132 ? B VAL 4 11 1 Y 1 B GLU 133 ? B GLU 5 12 1 Y 1 B ASN 258 ? B ASN 130 13 1 Y 1 B PRO 259 ? B PRO 131 14 1 Y 1 B GLU 260 ? B GLU 132 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TYR N N N N 464 TYR CA C N S 465 TYR C C N N 466 TYR O O N N 467 TYR CB C N N 468 TYR CG C Y N 469 TYR CD1 C Y N 470 TYR CD2 C Y N 471 TYR CE1 C Y N 472 TYR CE2 C Y N 473 TYR CZ C Y N 474 TYR OH O N N 475 TYR OXT O N N 476 TYR H H N N 477 TYR H2 H N N 478 TYR HA H N N 479 TYR HB2 H N N 480 TYR HB3 H N N 481 TYR HD1 H N N 482 TYR HD2 H N N 483 TYR HE1 H N N 484 TYR HE2 H N N 485 TYR HH H N N 486 TYR HXT H N N 487 VAL N N N N 488 VAL CA C N S 489 VAL C C N N 490 VAL O O N N 491 VAL CB C N N 492 VAL CG1 C N N 493 VAL CG2 C N N 494 VAL OXT O N N 495 VAL H H N N 496 VAL H2 H N N 497 VAL HA H N N 498 VAL HB H N N 499 VAL HG11 H N N 500 VAL HG12 H N N 501 VAL HG13 H N N 502 VAL HG21 H N N 503 VAL HG22 H N N 504 VAL HG23 H N N 505 VAL HXT H N N 506 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TYR N CA sing N N 455 TYR N H sing N N 456 TYR N H2 sing N N 457 TYR CA C sing N N 458 TYR CA CB sing N N 459 TYR CA HA sing N N 460 TYR C O doub N N 461 TYR C OXT sing N N 462 TYR CB CG sing N N 463 TYR CB HB2 sing N N 464 TYR CB HB3 sing N N 465 TYR CG CD1 doub Y N 466 TYR CG CD2 sing Y N 467 TYR CD1 CE1 sing Y N 468 TYR CD1 HD1 sing N N 469 TYR CD2 CE2 doub Y N 470 TYR CD2 HD2 sing N N 471 TYR CE1 CZ doub Y N 472 TYR CE1 HE1 sing N N 473 TYR CE2 CZ sing Y N 474 TYR CE2 HE2 sing N N 475 TYR CZ OH sing N N 476 TYR OH HH sing N N 477 TYR OXT HXT sing N N 478 VAL N CA sing N N 479 VAL N H sing N N 480 VAL N H2 sing N N 481 VAL CA C sing N N 482 VAL CA CB sing N N 483 VAL CA HA sing N N 484 VAL C O doub N N 485 VAL C OXT sing N N 486 VAL CB CG1 sing N N 487 VAL CB CG2 sing N N 488 VAL CB HB sing N N 489 VAL CG1 HG11 sing N N 490 VAL CG1 HG12 sing N N 491 VAL CG1 HG13 sing N N 492 VAL CG2 HG21 sing N N 493 VAL CG2 HG22 sing N N 494 VAL CG2 HG23 sing N N 495 VAL OXT HXT sing N N 496 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4FGN 'double helix' 4FGN 'a-form double helix' 4FGN 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DA 1 1_555 D DT 22 1_555 0.958 -0.003 0.720 -3.003 10.378 -10.187 1 Z_DA1:DT22_Y Z 1 ? Y 22 ? 20 1 1 C DG 2 1_555 D DC 21 1_555 0.727 0.098 0.328 20.953 7.859 -8.330 2 Z_DG2:DC21_Y Z 2 ? Y 21 ? 19 1 1 C DG 3 1_555 D DC 20 1_555 0.098 0.300 0.764 15.207 -15.141 -3.070 3 Z_DG3:DC20_Y Z 3 ? Y 20 ? 19 1 1 C DC 4 1_555 D DG 19 1_555 0.546 -0.362 0.347 0.130 -16.534 -4.802 4 Z_DC4:DG19_Y Z 4 ? Y 19 ? 19 1 1 C DC 5 1_555 D DG 18 1_555 0.680 -0.298 0.649 -6.545 0.461 8.520 5 Z_DC5:DG18_Y Z 5 ? Y 18 ? 19 1 1 C DT 6 1_555 D DA 17 1_555 -1.190 -0.208 0.124 13.875 -0.918 -9.780 6 Z_DT6:DA17_Y Z 6 ? Y 17 ? 20 1 1 C DC 7 1_555 D DG 16 1_555 0.193 -0.248 -0.407 8.852 -3.808 -3.820 7 Z_DC7:DG16_Y Z 7 ? Y 16 ? 19 1 1 C DC 8 1_555 D DG 15 1_555 -0.343 0.014 -0.619 14.391 3.329 -9.777 8 Z_DC8:DG15_Y Z 8 ? Y 15 ? 19 1 1 C DA 9 1_555 D DT 14 1_555 0.580 -0.041 0.631 34.447 -5.531 5.065 9 Z_DA9:DT14_Y Z 9 ? Y 14 ? 20 1 1 C DA 10 1_555 D DT 13 1_555 -0.170 0.149 -0.395 17.007 -2.776 0.550 10 Z_DA10:DT13_Y Z 10 ? Y 13 ? 20 1 1 C DA 11 1_555 D DT 12 1_555 -0.197 0.194 -0.295 11.548 1.649 3.894 11 Z_DA11:DT12_Y Z 11 ? Y 12 ? 20 1 1 C DA 12 1_555 D DT 11 1_555 -0.051 -0.066 -0.125 9.465 -7.428 1.052 12 Z_DA12:DT11_Y Z 12 ? Y 11 ? 20 1 1 C DA 13 1_555 D DT 10 1_555 0.073 -0.032 0.101 11.523 -14.833 4.487 13 Z_DA13:DT10_Y Z 13 ? Y 10 ? 20 1 1 C DA 14 1_555 D DT 9 1_555 0.244 -0.006 -0.027 7.223 -3.732 -6.075 14 Z_DA14:DT9_Y Z 14 ? Y 9 ? 20 1 1 C DG 15 1_555 D DC 8 1_555 -0.667 -0.176 0.202 -7.013 -17.385 -4.802 15 Z_DG15:DC8_Y Z 15 ? Y 8 ? 19 1 1 C DC 16 1_555 D DG 7 1_555 0.141 -0.162 0.195 -5.912 -3.874 -2.382 16 Z_DC16:DG7_Y Z 16 ? Y 7 ? 19 1 1 C DC 17 1_555 D DG 6 1_555 0.473 0.022 0.894 -13.740 14.522 8.338 17 Z_DC17:DG6_Y Z 17 ? Y 6 ? 19 1 1 C DT 18 1_555 D DA 5 1_555 -0.293 -0.050 0.231 17.433 -4.519 -4.740 18 Z_DT18:DA5_Y Z 18 ? Y 5 ? 20 1 1 C DC 19 1_555 D DG 4 1_555 1.097 -0.361 0.315 10.670 -15.931 4.933 19 Z_DC19:DG4_Y Z 19 ? Y 4 ? 19 1 1 C DC 20 1_555 D DG 3 1_555 -0.024 0.485 -0.172 9.206 -1.153 7.551 20 Z_DC20:DG3_Y Z 20 ? Y 3 ? ? 1 1 C DT 21 1_555 D DA 2 1_555 0.222 -0.061 -0.415 18.496 -10.680 6.665 21 Z_DT21:DA2_Y Z 21 ? Y 2 ? 20 1 1 C DC 22 1_555 D DG 1 1_555 -0.601 -4.796 -0.413 12.025 10.804 74.235 22 Z_DC22:DG1_Y Z 22 ? Y 1 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DA 1 1_555 D DT 22 1_555 C DG 2 1_555 D DC 21 1_555 0.660 -0.783 2.952 3.272 -1.857 29.282 -1.173 -0.654 3.048 -3.655 -6.440 29.517 1 ZZ_DA1DG2:DC21DT22_YY Z 1 ? Y 22 ? Z 2 ? Y 21 ? 1 C DG 2 1_555 D DC 21 1_555 C DG 3 1_555 D DC 20 1_555 0.771 -0.965 3.590 -2.703 -5.430 31.723 -0.663 -1.920 3.624 -9.821 4.888 32.283 2 ZZ_DG2DG3:DC20DC21_YY Z 2 ? Y 21 ? Z 3 ? Y 20 ? 1 C DG 3 1_555 D DC 20 1_555 C DC 4 1_555 D DG 19 1_555 0.126 -1.735 3.494 6.597 -1.356 38.486 -2.420 0.671 3.524 -2.038 -9.916 39.049 3 ZZ_DG3DC4:DG19DC20_YY Z 3 ? Y 20 ? Z 4 ? Y 19 ? 1 C DC 4 1_555 D DG 19 1_555 C DC 5 1_555 D DG 18 1_555 1.495 -1.007 3.229 3.447 5.452 35.084 -2.425 -1.949 3.170 8.950 -5.659 35.654 4 ZZ_DC4DC5:DG18DG19_YY Z 4 ? Y 19 ? Z 5 ? Y 18 ? 1 C DC 5 1_555 D DG 18 1_555 C DT 6 1_555 D DA 17 1_555 -1.763 -0.724 2.863 6.795 7.226 21.890 -3.523 5.915 1.905 17.893 -16.827 24.008 5 ZZ_DC5DT6:DA17DG18_YY Z 5 ? Y 18 ? Z 6 ? Y 17 ? 1 C DT 6 1_555 D DA 17 1_555 C DC 7 1_555 D DG 16 1_555 0.126 -0.258 3.301 3.370 2.265 38.286 -0.675 0.230 3.280 3.442 -5.120 38.493 6 ZZ_DT6DC7:DG16DA17_YY Z 6 ? Y 17 ? Z 7 ? Y 16 ? 1 C DC 7 1_555 D DG 16 1_555 C DC 8 1_555 D DG 15 1_555 0.565 0.680 3.166 1.314 4.441 33.527 0.463 -0.761 3.245 7.653 -2.264 33.837 7 ZZ_DC7DC8:DG15DG16_YY Z 7 ? Y 16 ? Z 8 ? Y 15 ? 1 C DC 8 1_555 D DG 15 1_555 C DA 9 1_555 D DT 14 1_555 -0.233 0.892 2.905 -12.254 8.232 42.965 0.480 -0.706 2.976 10.863 16.170 45.317 8 ZZ_DC8DA9:DT14DG15_YY Z 8 ? Y 15 ? Z 9 ? Y 14 ? 1 C DA 9 1_555 D DT 14 1_555 C DA 10 1_555 D DT 13 1_555 -0.072 -0.764 3.796 3.247 0.248 20.736 -2.218 1.789 3.731 0.684 -8.949 20.987 9 ZZ_DA9DA10:DT13DT14_YY Z 9 ? Y 14 ? Z 10 ? Y 13 ? 1 C DA 10 1_555 D DT 13 1_555 C DA 11 1_555 D DT 12 1_555 -0.069 0.096 3.389 -3.463 -4.366 39.123 0.675 -0.320 3.354 -6.480 5.139 39.502 10 ZZ_DA10DA11:DT12DT13_YY Z 10 ? Y 13 ? Z 11 ? Y 12 ? 1 C DA 11 1_555 D DT 12 1_555 C DA 12 1_555 D DT 11 1_555 -0.396 -0.244 3.275 -1.630 -0.185 39.747 -0.337 0.392 3.289 -0.272 2.396 39.779 11 ZZ_DA11DA12:DT11DT12_YY Z 11 ? Y 12 ? Z 12 ? Y 11 ? 1 C DA 12 1_555 D DT 11 1_555 C DA 13 1_555 D DT 10 1_555 0.255 -0.297 3.238 -0.143 -7.735 35.748 0.594 -0.426 3.229 -12.421 0.229 36.549 12 ZZ_DA12DA13:DT10DT11_YY Z 12 ? Y 11 ? Z 13 ? Y 10 ? 1 C DA 13 1_555 D DT 10 1_555 C DA 14 1_555 D DT 9 1_555 -0.060 -0.651 3.219 0.516 -0.217 36.825 -1.001 0.164 3.221 -0.344 -0.816 36.829 13 ZZ_DA13DA14:DT9DT10_YY Z 13 ? Y 10 ? Z 14 ? Y 9 ? 1 C DA 14 1_555 D DT 9 1_555 C DG 15 1_555 D DC 8 1_555 0.017 -0.983 3.688 -2.756 -4.315 33.595 -0.890 -0.534 3.768 -7.413 4.734 33.972 14 ZZ_DA14DG15:DC8DT9_YY Z 14 ? Y 9 ? Z 15 ? Y 8 ? 1 C DG 15 1_555 D DC 8 1_555 C DC 16 1_555 D DG 7 1_555 -0.562 -1.226 3.055 0.164 4.908 36.901 -2.515 0.900 2.872 7.712 -0.257 37.215 15 ZZ_DG15DC16:DG7DC8_YY Z 15 ? Y 8 ? Z 16 ? Y 7 ? 1 C DC 16 1_555 D DG 7 1_555 C DC 17 1_555 D DG 6 1_555 1.174 -0.480 3.605 -3.648 -2.150 40.524 -0.431 -2.126 3.511 -3.094 5.249 40.735 16 ZZ_DC16DC17:DG6DG7_YY Z 16 ? Y 7 ? Z 17 ? Y 6 ? 1 C DC 17 1_555 D DG 6 1_555 C DT 18 1_555 D DA 5 1_555 -1.077 -0.757 2.622 9.943 -10.918 19.715 0.873 4.943 2.010 -27.447 -24.996 24.588 17 ZZ_DC17DT18:DA5DG6_YY Z 17 ? Y 6 ? Z 18 ? Y 5 ? 1 C DT 18 1_555 D DA 5 1_555 C DC 19 1_555 D DG 4 1_555 1.469 0.043 3.503 5.042 -3.926 43.288 0.469 -1.444 3.626 -5.288 -6.791 43.735 18 ZZ_DT18DC19:DG4DA5_YY Z 18 ? Y 5 ? Z 19 ? Y 4 ? 1 C DC 19 1_555 D DG 4 1_555 C DC 20 1_555 D DG 3 1_555 0.023 0.128 2.976 5.992 12.576 31.255 -1.618 0.835 2.780 22.023 -10.492 34.148 19 ZZ_DC19DC20:DG3DG4_YY Z 19 ? Y 4 ? Z 20 ? Y 3 ? 1 C DC 20 1_555 D DG 3 1_555 C DT 21 1_555 D DA 2 1_555 -0.535 0.242 2.981 2.233 7.564 30.643 -0.838 1.360 2.911 14.023 -4.141 31.618 20 ZZ_DC20DT21:DA2DG3_YY Z 20 ? Y 3 ? Z 21 ? Y 2 ? 1 C DT 21 1_555 D DA 2 1_555 C DC 22 1_555 D DG 1 1_555 -1.989 -3.848 1.128 -176.563 9.037 -139.154 1.917 -1.135 0.433 -4.524 -88.382 -178.882 21 ZZ_DT21DC22:DG1DA2_YY Z 21 ? Y 2 ? Z 22 ? Y 1 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2NTC _pdbx_initial_refinement_model.details ? #