data_4FLP # _entry.id 4FLP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4FLP pdb_00004flp 10.2210/pdb4flp/pdb RCSB RCSB073055 ? ? WWPDB D_1000073055 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2RFJ _pdbx_database_related.details 'Holo structure of human BRDT first bromodomain' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4FLP _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-06-15 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Filippakopoulos, P.' 1 'Picaud, S.' 2 'Qi, J.' 3 'Felletar, I.' 4 'Canning, P.' 5 'Muniz, J.' 6 'von Delft, F.' 7 'Bountra, C.' 8 'Arrowsmith, C.H.' 9 'Edwards, A.' 10 'Bradner, J.' 11 'Knapp, S.' 12 'Structural Genomics Consortium (SGC)' 13 # _citation.id primary _citation.title 'Small-Molecule Inhibition of BRDT for Male Contraception.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 150 _citation.page_first 673 _citation.page_last 684 _citation.year 2012 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22901802 _citation.pdbx_database_id_DOI 10.1016/j.cell.2012.06.045 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Matzuk, M.M.' 1 ? primary 'McKeown, M.R.' 2 ? primary 'Filippakopoulos, P.' 3 ? primary 'Li, Q.' 4 ? primary 'Ma, L.' 5 ? primary 'Agno, J.E.' 6 ? primary 'Lemieux, M.E.' 7 ? primary 'Picaud, S.' 8 ? primary 'Yu, R.N.' 9 ? primary 'Qi, J.' 10 ? primary 'Knapp, S.' 11 ? primary 'Bradner, J.E.' 12 ? # _cell.entry_id 4FLP _cell.length_a 37.400 _cell.length_b 57.420 _cell.length_c 128.690 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4FLP _symmetry.space_group_name_H-M 'P 21 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain testis-specific protein' 14166.427 2 ? ? 'first bromodomain (UNP residues 21-137)' ? 2 non-polymer syn ;(6S)-6-(2-tert-butoxy-2-oxoethyl)-4-(4-chlorophenyl)-2,3,9-trimethyl-6,7-dihydrothieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-10-ium ; 457.996 2 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 4 water nat water 18.015 59 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cancer/testis antigen 9, CT9, RING3-like protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMNTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEE ; _entity_poly.pdbx_seq_one_letter_code_can ;SMNTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ASN n 1 4 THR n 1 5 LYS n 1 6 LYS n 1 7 ASN n 1 8 GLY n 1 9 ARG n 1 10 LEU n 1 11 THR n 1 12 ASN n 1 13 GLN n 1 14 LEU n 1 15 GLN n 1 16 TYR n 1 17 LEU n 1 18 GLN n 1 19 LYS n 1 20 VAL n 1 21 VAL n 1 22 LEU n 1 23 LYS n 1 24 ASP n 1 25 LEU n 1 26 TRP n 1 27 LYS n 1 28 HIS n 1 29 SER n 1 30 PHE n 1 31 SER n 1 32 TRP n 1 33 PRO n 1 34 PHE n 1 35 GLN n 1 36 ARG n 1 37 PRO n 1 38 VAL n 1 39 ASP n 1 40 ALA n 1 41 VAL n 1 42 LYS n 1 43 LEU n 1 44 GLN n 1 45 LEU n 1 46 PRO n 1 47 ASP n 1 48 TYR n 1 49 TYR n 1 50 THR n 1 51 ILE n 1 52 ILE n 1 53 LYS n 1 54 ASN n 1 55 PRO n 1 56 MET n 1 57 ASP n 1 58 LEU n 1 59 ASN n 1 60 THR n 1 61 ILE n 1 62 LYS n 1 63 LYS n 1 64 ARG n 1 65 LEU n 1 66 GLU n 1 67 ASN n 1 68 LYS n 1 69 TYR n 1 70 TYR n 1 71 ALA n 1 72 LYS n 1 73 ALA n 1 74 SER n 1 75 GLU n 1 76 CYS n 1 77 ILE n 1 78 GLU n 1 79 ASP n 1 80 PHE n 1 81 ASN n 1 82 THR n 1 83 MET n 1 84 PHE n 1 85 SER n 1 86 ASN n 1 87 CYS n 1 88 TYR n 1 89 LEU n 1 90 TYR n 1 91 ASN n 1 92 LYS n 1 93 PRO n 1 94 GLY n 1 95 ASP n 1 96 ASP n 1 97 ILE n 1 98 VAL n 1 99 LEU n 1 100 MET n 1 101 ALA n 1 102 GLN n 1 103 ALA n 1 104 LEU n 1 105 GLU n 1 106 LYS n 1 107 LEU n 1 108 PHE n 1 109 MET n 1 110 GLN n 1 111 LYS n 1 112 LEU n 1 113 SER n 1 114 GLN n 1 115 MET n 1 116 PRO n 1 117 GLN n 1 118 GLU n 1 119 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BRDT _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-R3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC28-Bsa4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRDT_HUMAN _struct_ref.pdbx_db_accession Q58F21 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNT MFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEE ; _struct_ref.pdbx_align_begin 21 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4FLP A 3 ? 119 ? Q58F21 21 ? 137 ? 21 137 2 1 4FLP B 3 ? 118 ? Q58F21 21 ? 137 ? 21 136 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4FLP SER A 1 ? UNP Q58F21 ? ? 'expression tag' 19 1 1 4FLP MET A 2 ? UNP Q58F21 ? ? 'expression tag' 20 2 2 4FLP SER B 1 ? UNP Q58F21 ? ? 'expression tag' 19 3 2 4FLP MET B 2 ? UNP Q58F21 ? ? 'expression tag' 20 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 JQ1 non-polymer . ;(6S)-6-(2-tert-butoxy-2-oxoethyl)-4-(4-chlorophenyl)-2,3,9-trimethyl-6,7-dihydrothieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-10-ium ; ? 'C23 H26 Cl N4 O2 S 1' 457.996 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4FLP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.44 _exptl_crystal.density_percent_sol 49.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1M BisTris propane pH 8.0, 0.15M KSCN, 25% PEG3350, 10% EtGly , VAPOR DIFFUSION, SITTING DROP, temperature 277K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-01-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9763 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9763 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4FLP _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 37.400 _reflns.d_resolution_high 2.200 _reflns.number_obs 14655 _reflns.number_all 14729 _reflns.percent_possible_obs 99.500 _reflns.pdbx_Rmerge_I_obs 0.110 _reflns.pdbx_Rsym_value 0.110 _reflns.pdbx_netI_over_sigmaI 7.200 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.400 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 2.200 2.320 99.900 0.655 0.655 1.100 3.600 ? ? ? ? ? ? 1 2 2.320 2.460 99.900 0.436 0.436 1.700 3.500 ? ? ? ? ? ? 1 3 2.460 2.630 99.900 0.287 0.287 2.600 3.500 ? ? ? ? ? ? 1 4 2.630 2.840 99.900 0.191 0.191 3.800 3.500 ? ? ? ? ? ? 1 5 2.840 3.110 99.800 0.121 0.121 5.700 3.400 ? ? ? ? ? ? 1 6 3.110 3.480 99.400 0.088 0.088 6.600 3.500 ? ? ? ? ? ? 1 7 3.480 4.020 99.000 0.084 0.084 7.000 3.500 ? ? ? ? ? ? 1 8 4.020 4.920 99.000 0.084 0.084 6.500 3.100 ? ? ? ? ? ? 1 9 4.920 6.960 99.100 0.081 0.081 6.200 3.200 ? ? ? ? ? ? 1 10 6.960 37.400 96.400 0.067 0.067 6.900 3.000 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4FLP _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13419 _refine.ls_number_reflns_all 14168 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.84 _refine.ls_d_res_high 2.23 _refine.ls_percent_reflns_obs 99.71 _refine.ls_R_factor_obs 0.21343 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21113 _refine.ls_R_factor_R_free 0.25487 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 708 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.500 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.936 _refine.B_iso_mean 37.929 _refine.aniso_B[1][1] 0.42 _refine.aniso_B[2][2] -0.49 _refine.aniso_B[3][3] 0.07 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'Ensemble of 2RFJ, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.271 _refine.pdbx_overall_ESU_R_Free 0.217 _refine.overall_SU_ML 0.167 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 12.026 _refine.overall_SU_R_Cruickshank_DPI 0.2648 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1730 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 63 _refine_hist.number_atoms_solvent 59 _refine_hist.number_atoms_total 1852 _refine_hist.d_res_high 2.23 _refine_hist.d_res_low 42.84 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 1881 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1234 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.660 2.006 ? 2572 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.923 3.001 ? 3014 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.893 5.000 ? 220 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.596 25.244 ? 82 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.006 15.000 ? 317 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11.536 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.086 0.200 ? 272 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.021 ? 2052 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 355 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 4.170 3.000 ? 1093 'X-RAY DIFFRACTION' ? r_mcbond_other 1.259 3.000 ? 421 'X-RAY DIFFRACTION' ? r_mcangle_it 6.335 5.000 ? 1774 'X-RAY DIFFRACTION' ? r_scbond_it 9.847 8.000 ? 788 'X-RAY DIFFRACTION' ? r_scangle_it 11.799 11.000 ? 795 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.230 _refine_ls_shell.d_res_low 2.288 _refine_ls_shell.number_reflns_R_work 978 _refine_ls_shell.R_factor_R_work 0.356 _refine_ls_shell.percent_reflns_obs 99.90 _refine_ls_shell.R_factor_R_free 0.499 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 46 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4FLP _struct.title 'Crystal Structure of the first bromodomain of human BRDT in complex with the inhibitor JQ1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4FLP _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR/INHIBITOR' _struct_keywords.text ;BRDT, bromodomain containing protein testis specific, Nucleus, Transcription, Transcription regulation, Structural Genomics Consortium, SGC, Bromodomain, TRANSCRIPTION REGULATOR-INHIBITOR complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 11 ? VAL A 20 ? THR A 29 VAL A 38 1 ? 10 HELX_P HELX_P2 2 VAL A 20 ? HIS A 28 ? VAL A 38 HIS A 46 1 ? 9 HELX_P HELX_P3 3 SER A 31 ? GLN A 35 ? SER A 49 GLN A 53 5 ? 5 HELX_P HELX_P4 4 ASP A 39 ? GLN A 44 ? ASP A 57 GLN A 62 1 ? 6 HELX_P HELX_P5 5 ASP A 47 ? ILE A 52 ? ASP A 65 ILE A 70 1 ? 6 HELX_P HELX_P6 6 ASP A 57 ? ASN A 67 ? ASP A 75 ASN A 85 1 ? 11 HELX_P HELX_P7 7 LYS A 72 ? ASN A 91 ? LYS A 90 ASN A 109 1 ? 20 HELX_P HELX_P8 8 ASP A 95 ? GLN A 114 ? ASP A 113 GLN A 132 1 ? 20 HELX_P HELX_P9 9 ASN B 12 ? VAL B 20 ? ASN B 30 VAL B 38 1 ? 9 HELX_P HELX_P10 10 VAL B 20 ? HIS B 28 ? VAL B 38 HIS B 46 1 ? 9 HELX_P HELX_P11 11 SER B 29 ? GLN B 35 ? SER B 47 GLN B 53 5 ? 7 HELX_P HELX_P12 12 ASP B 39 ? GLN B 44 ? ASP B 57 GLN B 62 1 ? 6 HELX_P HELX_P13 13 ASP B 47 ? ILE B 52 ? ASP B 65 ILE B 70 1 ? 6 HELX_P HELX_P14 14 ASP B 57 ? LYS B 68 ? ASP B 75 LYS B 86 1 ? 12 HELX_P HELX_P15 15 LYS B 72 ? ASN B 91 ? LYS B 90 ASN B 109 1 ? 20 HELX_P HELX_P16 16 ASP B 95 ? GLN B 114 ? ASP B 113 GLN B 132 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B TYR 88 O ? ? ? 1_555 E K . K ? ? B TYR 106 B K 202 1_555 ? ? ? ? ? ? ? 2.663 ? ? metalc2 metalc ? ? B LEU 89 O ? ? ? 1_555 E K . K ? ? B LEU 107 B K 202 1_555 ? ? ? ? ? ? ? 2.771 ? ? metalc3 metalc ? ? B ASN 91 O ? ? ? 1_555 E K . K ? ? B ASN 109 B K 202 1_555 ? ? ? ? ? ? ? 2.666 ? ? metalc4 metalc ? ? E K . K ? ? ? 1_555 G HOH . O ? ? B K 202 B HOH 307 1_555 ? ? ? ? ? ? ? 3.291 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A JQ1 201 ? 11 'BINDING SITE FOR RESIDUE JQ1 A 201' AC2 Software B JQ1 201 ? 9 'BINDING SITE FOR RESIDUE JQ1 B 201' AC3 Software B K 202 ? 6 'BINDING SITE FOR RESIDUE K B 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 TRP A 32 ? TRP A 50 . ? 1_555 ? 2 AC1 11 PRO A 33 ? PRO A 51 . ? 1_555 ? 3 AC1 11 LEU A 43 ? LEU A 61 . ? 1_555 ? 4 AC1 11 LEU A 45 ? LEU A 63 . ? 1_555 ? 5 AC1 11 THR A 50 ? THR A 68 . ? 3_454 ? 6 AC1 11 ASN A 91 ? ASN A 109 . ? 1_555 ? 7 AC1 11 ASP A 96 ? ASP A 114 . ? 1_555 ? 8 AC1 11 ILE A 97 ? ILE A 115 . ? 1_555 ? 9 AC1 11 HOH F . ? HOH A 301 . ? 1_555 ? 10 AC1 11 HOH F . ? HOH A 345 . ? 1_555 ? 11 AC1 11 SER B 29 ? SER B 47 . ? 3_454 ? 12 AC2 9 SER A 29 ? SER A 47 . ? 3_554 ? 13 AC2 9 TRP B 32 ? TRP B 50 . ? 1_555 ? 14 AC2 9 PRO B 33 ? PRO B 51 . ? 1_555 ? 15 AC2 9 VAL B 38 ? VAL B 56 . ? 1_555 ? 16 AC2 9 LEU B 43 ? LEU B 61 . ? 1_555 ? 17 AC2 9 LEU B 45 ? LEU B 63 . ? 1_555 ? 18 AC2 9 ASN B 91 ? ASN B 109 . ? 1_555 ? 19 AC2 9 ASP B 96 ? ASP B 114 . ? 1_555 ? 20 AC2 9 ILE B 97 ? ILE B 115 . ? 1_555 ? 21 AC3 6 TYR B 88 ? TYR B 106 . ? 1_555 ? 22 AC3 6 TYR B 88 ? TYR B 106 . ? 2_654 ? 23 AC3 6 LEU B 89 ? LEU B 107 . ? 1_555 ? 24 AC3 6 LEU B 89 ? LEU B 107 . ? 2_654 ? 25 AC3 6 ASN B 91 ? ASN B 109 . ? 1_555 ? 26 AC3 6 ASN B 91 ? ASN B 109 . ? 2_654 ? # _atom_sites.entry_id 4FLP _atom_sites.fract_transf_matrix[1][1] 0.026738 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017416 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007771 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL K N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 19 ? ? ? A . n A 1 2 MET 2 20 ? ? ? A . n A 1 3 ASN 3 21 ? ? ? A . n A 1 4 THR 4 22 ? ? ? A . n A 1 5 LYS 5 23 ? ? ? A . n A 1 6 LYS 6 24 ? ? ? A . n A 1 7 ASN 7 25 ? ? ? A . n A 1 8 GLY 8 26 ? ? ? A . n A 1 9 ARG 9 27 ? ? ? A . n A 1 10 LEU 10 28 ? ? ? A . n A 1 11 THR 11 29 29 THR THR A . n A 1 12 ASN 12 30 30 ASN ASN A . n A 1 13 GLN 13 31 31 GLN GLN A . n A 1 14 LEU 14 32 32 LEU LEU A . n A 1 15 GLN 15 33 33 GLN GLN A . n A 1 16 TYR 16 34 34 TYR TYR A . n A 1 17 LEU 17 35 35 LEU LEU A . n A 1 18 GLN 18 36 36 GLN GLN A . n A 1 19 LYS 19 37 37 LYS LYS A . n A 1 20 VAL 20 38 38 VAL VAL A . n A 1 21 VAL 21 39 39 VAL VAL A . n A 1 22 LEU 22 40 40 LEU LEU A . n A 1 23 LYS 23 41 41 LYS LYS A . n A 1 24 ASP 24 42 42 ASP ASP A . n A 1 25 LEU 25 43 43 LEU LEU A . n A 1 26 TRP 26 44 44 TRP TRP A . n A 1 27 LYS 27 45 45 LYS LYS A . n A 1 28 HIS 28 46 46 HIS HIS A . n A 1 29 SER 29 47 47 SER SER A . n A 1 30 PHE 30 48 48 PHE PHE A . n A 1 31 SER 31 49 49 SER SER A . n A 1 32 TRP 32 50 50 TRP TRP A . n A 1 33 PRO 33 51 51 PRO PRO A . n A 1 34 PHE 34 52 52 PHE PHE A . n A 1 35 GLN 35 53 53 GLN GLN A . n A 1 36 ARG 36 54 54 ARG ARG A . n A 1 37 PRO 37 55 55 PRO PRO A . n A 1 38 VAL 38 56 56 VAL VAL A . n A 1 39 ASP 39 57 57 ASP ASP A . n A 1 40 ALA 40 58 58 ALA ALA A . n A 1 41 VAL 41 59 59 VAL VAL A . n A 1 42 LYS 42 60 60 LYS LYS A . n A 1 43 LEU 43 61 61 LEU LEU A . n A 1 44 GLN 44 62 62 GLN GLN A . n A 1 45 LEU 45 63 63 LEU LEU A . n A 1 46 PRO 46 64 64 PRO PRO A . n A 1 47 ASP 47 65 65 ASP ASP A . n A 1 48 TYR 48 66 66 TYR TYR A . n A 1 49 TYR 49 67 67 TYR TYR A . n A 1 50 THR 50 68 68 THR THR A . n A 1 51 ILE 51 69 69 ILE ILE A . n A 1 52 ILE 52 70 70 ILE ILE A . n A 1 53 LYS 53 71 71 LYS LYS A . n A 1 54 ASN 54 72 72 ASN ASN A . n A 1 55 PRO 55 73 73 PRO PRO A . n A 1 56 MET 56 74 74 MET MET A . n A 1 57 ASP 57 75 75 ASP ASP A . n A 1 58 LEU 58 76 76 LEU LEU A . n A 1 59 ASN 59 77 77 ASN ASN A . n A 1 60 THR 60 78 78 THR THR A . n A 1 61 ILE 61 79 79 ILE ILE A . n A 1 62 LYS 62 80 80 LYS LYS A . n A 1 63 LYS 63 81 81 LYS LYS A . n A 1 64 ARG 64 82 82 ARG ARG A . n A 1 65 LEU 65 83 83 LEU LEU A . n A 1 66 GLU 66 84 84 GLU GLU A . n A 1 67 ASN 67 85 85 ASN ASN A . n A 1 68 LYS 68 86 86 LYS LYS A . n A 1 69 TYR 69 87 87 TYR TYR A . n A 1 70 TYR 70 88 88 TYR TYR A . n A 1 71 ALA 71 89 89 ALA ALA A . n A 1 72 LYS 72 90 90 LYS LYS A . n A 1 73 ALA 73 91 91 ALA ALA A . n A 1 74 SER 74 92 92 SER SER A . n A 1 75 GLU 75 93 93 GLU GLU A . n A 1 76 CYS 76 94 94 CYS CYS A . n A 1 77 ILE 77 95 95 ILE ILE A . n A 1 78 GLU 78 96 96 GLU GLU A . n A 1 79 ASP 79 97 97 ASP ASP A . n A 1 80 PHE 80 98 98 PHE PHE A . n A 1 81 ASN 81 99 99 ASN ASN A . n A 1 82 THR 82 100 100 THR THR A . n A 1 83 MET 83 101 101 MET MET A . n A 1 84 PHE 84 102 102 PHE PHE A . n A 1 85 SER 85 103 103 SER SER A . n A 1 86 ASN 86 104 104 ASN ASN A . n A 1 87 CYS 87 105 105 CYS CYS A . n A 1 88 TYR 88 106 106 TYR TYR A . n A 1 89 LEU 89 107 107 LEU LEU A . n A 1 90 TYR 90 108 108 TYR TYR A . n A 1 91 ASN 91 109 109 ASN ASN A . n A 1 92 LYS 92 110 110 LYS LYS A . n A 1 93 PRO 93 111 111 PRO PRO A . n A 1 94 GLY 94 112 112 GLY GLY A . n A 1 95 ASP 95 113 113 ASP ASP A . n A 1 96 ASP 96 114 114 ASP ASP A . n A 1 97 ILE 97 115 115 ILE ILE A . n A 1 98 VAL 98 116 116 VAL VAL A . n A 1 99 LEU 99 117 117 LEU LEU A . n A 1 100 MET 100 118 118 MET MET A . n A 1 101 ALA 101 119 119 ALA ALA A . n A 1 102 GLN 102 120 120 GLN GLN A . n A 1 103 ALA 103 121 121 ALA ALA A . n A 1 104 LEU 104 122 122 LEU LEU A . n A 1 105 GLU 105 123 123 GLU GLU A . n A 1 106 LYS 106 124 124 LYS LYS A . n A 1 107 LEU 107 125 125 LEU LEU A . n A 1 108 PHE 108 126 126 PHE PHE A . n A 1 109 MET 109 127 127 MET MET A . n A 1 110 GLN 110 128 128 GLN GLN A . n A 1 111 LYS 111 129 129 LYS LYS A . n A 1 112 LEU 112 130 130 LEU LEU A . n A 1 113 SER 113 131 131 SER SER A . n A 1 114 GLN 114 132 132 GLN GLN A . n A 1 115 MET 115 133 133 MET MET A . n A 1 116 PRO 116 134 134 PRO PRO A . n A 1 117 GLN 117 135 ? ? ? A . n A 1 118 GLU 118 136 ? ? ? A . n A 1 119 GLU 119 137 ? ? ? A . n B 1 1 SER 1 19 ? ? ? B . n B 1 2 MET 2 20 ? ? ? B . n B 1 3 ASN 3 21 ? ? ? B . n B 1 4 THR 4 22 ? ? ? B . n B 1 5 LYS 5 23 ? ? ? B . n B 1 6 LYS 6 24 ? ? ? B . n B 1 7 ASN 7 25 ? ? ? B . n B 1 8 GLY 8 26 ? ? ? B . n B 1 9 ARG 9 27 ? ? ? B . n B 1 10 LEU 10 28 ? ? ? B . n B 1 11 THR 11 29 29 THR THR B . n B 1 12 ASN 12 30 30 ASN ASN B . n B 1 13 GLN 13 31 31 GLN GLN B . n B 1 14 LEU 14 32 32 LEU LEU B . n B 1 15 GLN 15 33 33 GLN GLN B . n B 1 16 TYR 16 34 34 TYR TYR B . n B 1 17 LEU 17 35 35 LEU LEU B . n B 1 18 GLN 18 36 36 GLN GLN B . n B 1 19 LYS 19 37 37 LYS LYS B . n B 1 20 VAL 20 38 38 VAL VAL B . n B 1 21 VAL 21 39 39 VAL VAL B . n B 1 22 LEU 22 40 40 LEU LEU B . n B 1 23 LYS 23 41 41 LYS LYS B . n B 1 24 ASP 24 42 42 ASP ASP B . n B 1 25 LEU 25 43 43 LEU LEU B . n B 1 26 TRP 26 44 44 TRP TRP B . n B 1 27 LYS 27 45 45 LYS LYS B . n B 1 28 HIS 28 46 46 HIS HIS B . n B 1 29 SER 29 47 47 SER SER B . n B 1 30 PHE 30 48 48 PHE PHE B . n B 1 31 SER 31 49 49 SER SER B . n B 1 32 TRP 32 50 50 TRP TRP B . n B 1 33 PRO 33 51 51 PRO PRO B . n B 1 34 PHE 34 52 52 PHE PHE B . n B 1 35 GLN 35 53 53 GLN GLN B . n B 1 36 ARG 36 54 54 ARG ARG B . n B 1 37 PRO 37 55 55 PRO PRO B . n B 1 38 VAL 38 56 56 VAL VAL B . n B 1 39 ASP 39 57 57 ASP ASP B . n B 1 40 ALA 40 58 58 ALA ALA B . n B 1 41 VAL 41 59 59 VAL VAL B . n B 1 42 LYS 42 60 60 LYS LYS B . n B 1 43 LEU 43 61 61 LEU LEU B . n B 1 44 GLN 44 62 62 GLN GLN B . n B 1 45 LEU 45 63 63 LEU LEU B . n B 1 46 PRO 46 64 64 PRO PRO B . n B 1 47 ASP 47 65 65 ASP ASP B . n B 1 48 TYR 48 66 66 TYR TYR B . n B 1 49 TYR 49 67 67 TYR TYR B . n B 1 50 THR 50 68 68 THR THR B . n B 1 51 ILE 51 69 69 ILE ILE B . n B 1 52 ILE 52 70 70 ILE ILE B . n B 1 53 LYS 53 71 71 LYS LYS B . n B 1 54 ASN 54 72 72 ASN ASN B . n B 1 55 PRO 55 73 73 PRO PRO B . n B 1 56 MET 56 74 74 MET MET B . n B 1 57 ASP 57 75 75 ASP ASP B . n B 1 58 LEU 58 76 76 LEU LEU B . n B 1 59 ASN 59 77 77 ASN ASN B . n B 1 60 THR 60 78 78 THR THR B . n B 1 61 ILE 61 79 79 ILE ILE B . n B 1 62 LYS 62 80 80 LYS LYS B . n B 1 63 LYS 63 81 81 LYS LYS B . n B 1 64 ARG 64 82 82 ARG ARG B . n B 1 65 LEU 65 83 83 LEU LEU B . n B 1 66 GLU 66 84 84 GLU GLU B . n B 1 67 ASN 67 85 85 ASN ASN B . n B 1 68 LYS 68 86 86 LYS LYS B . n B 1 69 TYR 69 87 87 TYR TYR B . n B 1 70 TYR 70 88 88 TYR TYR B . n B 1 71 ALA 71 89 89 ALA ALA B . n B 1 72 LYS 72 90 90 LYS LYS B . n B 1 73 ALA 73 91 91 ALA ALA B . n B 1 74 SER 74 92 92 SER SER B . n B 1 75 GLU 75 93 93 GLU GLU B . n B 1 76 CYS 76 94 94 CYS CYS B . n B 1 77 ILE 77 95 95 ILE ILE B . n B 1 78 GLU 78 96 96 GLU GLU B . n B 1 79 ASP 79 97 97 ASP ASP B . n B 1 80 PHE 80 98 98 PHE PHE B . n B 1 81 ASN 81 99 99 ASN ASN B . n B 1 82 THR 82 100 100 THR THR B . n B 1 83 MET 83 101 101 MET MET B . n B 1 84 PHE 84 102 102 PHE PHE B . n B 1 85 SER 85 103 103 SER SER B . n B 1 86 ASN 86 104 104 ASN ASN B . n B 1 87 CYS 87 105 105 CYS CYS B . n B 1 88 TYR 88 106 106 TYR TYR B . n B 1 89 LEU 89 107 107 LEU LEU B . n B 1 90 TYR 90 108 108 TYR TYR B . n B 1 91 ASN 91 109 109 ASN ASN B . n B 1 92 LYS 92 110 110 LYS LYS B . n B 1 93 PRO 93 111 111 PRO PRO B . n B 1 94 GLY 94 112 112 GLY GLY B . n B 1 95 ASP 95 113 113 ASP ASP B . n B 1 96 ASP 96 114 114 ASP ASP B . n B 1 97 ILE 97 115 115 ILE ILE B . n B 1 98 VAL 98 116 116 VAL VAL B . n B 1 99 LEU 99 117 117 LEU LEU B . n B 1 100 MET 100 118 118 MET MET B . n B 1 101 ALA 101 119 119 ALA ALA B . n B 1 102 GLN 102 120 120 GLN GLN B . n B 1 103 ALA 103 121 121 ALA ALA B . n B 1 104 LEU 104 122 122 LEU LEU B . n B 1 105 GLU 105 123 123 GLU GLU B . n B 1 106 LYS 106 124 124 LYS LYS B . n B 1 107 LEU 107 125 125 LEU LEU B . n B 1 108 PHE 108 126 126 PHE PHE B . n B 1 109 MET 109 127 127 MET MET B . n B 1 110 GLN 110 128 128 GLN GLN B . n B 1 111 LYS 111 129 129 LYS LYS B . n B 1 112 LEU 112 130 130 LEU LEU B . n B 1 113 SER 113 131 131 SER SER B . n B 1 114 GLN 114 132 132 GLN GLN B . n B 1 115 MET 115 133 133 MET MET B . n B 1 116 PRO 116 134 134 PRO PRO B . n B 1 117 GLN 117 135 135 GLN GLU B . n B 1 118 GLU 118 136 ? ? ? B . n B 1 119 GLU 119 137 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 JQ1 1 201 1 JQ1 JQ1 A . D 2 JQ1 1 201 2 JQ1 JQ1 B . E 3 K 1 202 1 K K B . F 4 HOH 1 301 1 HOH HOH A . F 4 HOH 2 302 2 HOH HOH A . F 4 HOH 3 303 3 HOH HOH A . F 4 HOH 4 304 4 HOH HOH A . F 4 HOH 5 305 5 HOH HOH A . F 4 HOH 6 306 6 HOH HOH A . F 4 HOH 7 307 7 HOH HOH A . F 4 HOH 8 308 8 HOH HOH A . F 4 HOH 9 309 10 HOH HOH A . F 4 HOH 10 310 11 HOH HOH A . F 4 HOH 11 311 12 HOH HOH A . F 4 HOH 12 312 14 HOH HOH A . F 4 HOH 13 313 15 HOH HOH A . F 4 HOH 14 314 17 HOH HOH A . F 4 HOH 15 315 18 HOH HOH A . F 4 HOH 16 316 20 HOH HOH A . F 4 HOH 17 317 22 HOH HOH A . F 4 HOH 18 318 23 HOH HOH A . F 4 HOH 19 319 24 HOH HOH A . F 4 HOH 20 320 26 HOH HOH A . F 4 HOH 21 321 29 HOH HOH A . F 4 HOH 22 322 30 HOH HOH A . F 4 HOH 23 323 31 HOH HOH A . F 4 HOH 24 324 33 HOH HOH A . F 4 HOH 25 325 34 HOH HOH A . F 4 HOH 26 326 35 HOH HOH A . F 4 HOH 27 327 36 HOH HOH A . F 4 HOH 28 328 37 HOH HOH A . F 4 HOH 29 329 38 HOH HOH A . F 4 HOH 30 330 41 HOH HOH A . F 4 HOH 31 331 42 HOH HOH A . F 4 HOH 32 332 43 HOH HOH A . F 4 HOH 33 333 44 HOH HOH A . F 4 HOH 34 334 46 HOH HOH A . F 4 HOH 35 335 47 HOH HOH A . F 4 HOH 36 336 48 HOH HOH A . F 4 HOH 37 337 49 HOH HOH A . F 4 HOH 38 338 50 HOH HOH A . F 4 HOH 39 339 51 HOH HOH A . F 4 HOH 40 340 52 HOH HOH A . F 4 HOH 41 341 53 HOH HOH A . F 4 HOH 42 342 56 HOH HOH A . F 4 HOH 43 343 57 HOH HOH A . F 4 HOH 44 344 58 HOH HOH A . F 4 HOH 45 345 59 HOH HOH A . G 4 HOH 1 301 9 HOH HOH B . G 4 HOH 2 302 13 HOH HOH B . G 4 HOH 3 303 16 HOH HOH B . G 4 HOH 4 304 19 HOH HOH B . G 4 HOH 5 305 21 HOH HOH B . G 4 HOH 6 306 25 HOH HOH B . G 4 HOH 7 307 27 HOH HOH B . G 4 HOH 8 308 28 HOH HOH B . G 4 HOH 9 309 32 HOH HOH B . G 4 HOH 10 310 39 HOH HOH B . G 4 HOH 11 311 40 HOH HOH B . G 4 HOH 12 312 45 HOH HOH B . G 4 HOH 13 313 54 HOH HOH B . G 4 HOH 14 314 55 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,F 2 1 B,D,E,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B K 202 ? E K . 2 1 B HOH 307 ? G HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? B TYR 88 ? B TYR 106 ? 1_555 K ? E K . ? B K 202 ? 1_555 O ? B LEU 89 ? B LEU 107 ? 1_555 67.2 ? 2 O ? B TYR 88 ? B TYR 106 ? 1_555 K ? E K . ? B K 202 ? 1_555 O ? B ASN 91 ? B ASN 109 ? 1_555 78.4 ? 3 O ? B LEU 89 ? B LEU 107 ? 1_555 K ? E K . ? B K 202 ? 1_555 O ? B ASN 91 ? B ASN 109 ? 1_555 85.2 ? 4 O ? B TYR 88 ? B TYR 106 ? 1_555 K ? E K . ? B K 202 ? 1_555 O ? G HOH . ? B HOH 307 ? 1_555 141.0 ? 5 O ? B LEU 89 ? B LEU 107 ? 1_555 K ? E K . ? B K 202 ? 1_555 O ? G HOH . ? B HOH 307 ? 1_555 102.4 ? 6 O ? B ASN 91 ? B ASN 109 ? 1_555 K ? E K . ? B K 202 ? 1_555 O ? G HOH . ? B HOH 307 ? 1_555 63.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-07-11 2 'Structure model' 1 1 2012-08-29 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.value' 12 3 'Structure model' '_struct_conn.pdbx_dist_value' 13 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 14 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 15 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 16 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 17 3 'Structure model' '_struct_ref_seq_dif.details' 18 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.200 _diffrn_reflns.pdbx_d_res_low 37.400 _diffrn_reflns.pdbx_number_obs 14655 _diffrn_reflns.pdbx_Rmerge_I_obs ? _diffrn_reflns.pdbx_Rsym_value 0.110 _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.av_sigmaI_over_netI 4.10 _diffrn_reflns.pdbx_redundancy 3.40 _diffrn_reflns.pdbx_percent_possible_obs 99.50 _diffrn_reflns.number 50419 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 6.96 37.40 ? ? 0.067 0.067 ? 3.00 96.40 1 4.92 6.96 ? ? 0.081 0.081 ? 3.20 99.10 1 4.02 4.92 ? ? 0.084 0.084 ? 3.10 99.00 1 3.48 4.02 ? ? 0.084 0.084 ? 3.50 99.00 1 3.11 3.48 ? ? 0.088 0.088 ? 3.50 99.40 1 2.84 3.11 ? ? 0.121 0.121 ? 3.40 99.80 1 2.63 2.84 ? ? 0.191 0.191 ? 3.50 99.90 1 2.46 2.63 ? ? 0.287 0.287 ? 3.50 99.90 1 2.32 2.46 ? ? 0.436 0.436 ? 3.50 99.90 1 2.20 2.32 ? ? 0.655 0.655 ? 3.60 99.90 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 10.0889 -14.6915 -26.5138 0.0432 0.1797 0.0807 0.0047 0.0225 -0.0104 1.3124 0.9486 0.9864 0.2977 -0.4159 -0.3516 -0.1329 0.0226 -0.1662 0.0185 0.0593 -0.0879 0.0860 -0.0381 0.0736 'X-RAY DIFFRACTION' 2 ? refined 12.8874 -5.7402 -53.9038 0.1253 0.2480 0.0276 -0.0420 -0.0468 -0.0209 0.1063 1.5854 3.3429 -0.3148 -0.2415 -0.5831 0.0510 0.0435 -0.0077 -0.1856 -0.0281 0.0118 0.1909 -0.2902 -0.0229 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 29 ? ? A 134 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 29 ? ? B 135 ? ? ? ? # _pdbx_phasing_MR.entry_id 4FLP _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 47.720 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 35.930 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 35.930 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA 3.3.16 2010/01/06 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PHASER 2.1.4 'Wed Jun 24 14:00:05 2009' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.11 'August 3, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 DNA . ? ? ? ? 'data collection' ? ? ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 105 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 105 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.708 _pdbx_validate_rmsd_bond.bond_target_value 1.812 _pdbx_validate_rmsd_bond.bond_deviation -0.104 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 38 ? ? -101.04 -63.06 2 1 LEU A 63 ? ? -117.18 76.54 3 1 ASN A 72 ? ? -119.76 73.58 4 1 VAL B 38 ? ? -107.51 -66.32 5 1 ASN B 72 ? ? -119.80 68.32 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 30 ? CG ? A ASN 12 CG 2 1 Y 1 A ASN 30 ? OD1 ? A ASN 12 OD1 3 1 Y 1 A ASN 30 ? ND2 ? A ASN 12 ND2 4 1 Y 1 A LYS 86 ? CD ? A LYS 68 CD 5 1 Y 1 A LYS 86 ? CE ? A LYS 68 CE 6 1 Y 1 A LYS 86 ? NZ ? A LYS 68 NZ 7 1 Y 1 A LYS 90 ? CE ? A LYS 72 CE 8 1 Y 1 A LYS 90 ? NZ ? A LYS 72 NZ 9 1 Y 1 A GLN 132 ? CD ? A GLN 114 CD 10 1 Y 1 A GLN 132 ? OE1 ? A GLN 114 OE1 11 1 Y 1 A GLN 132 ? NE2 ? A GLN 114 NE2 12 1 Y 1 B THR 29 ? OG1 ? B THR 11 OG1 13 1 Y 1 B THR 29 ? CG2 ? B THR 11 CG2 14 1 Y 1 B ASN 30 ? CG ? B ASN 12 CG 15 1 Y 1 B ASN 30 ? OD1 ? B ASN 12 OD1 16 1 Y 1 B ASN 30 ? ND2 ? B ASN 12 ND2 17 1 Y 1 B LYS 37 ? CE ? B LYS 19 CE 18 1 Y 1 B LYS 37 ? NZ ? B LYS 19 NZ 19 1 Y 1 B LYS 41 ? CE ? B LYS 23 CE 20 1 Y 1 B LYS 41 ? NZ ? B LYS 23 NZ 21 1 Y 1 B LYS 60 ? CD ? B LYS 42 CD 22 1 Y 1 B LYS 60 ? CE ? B LYS 42 CE 23 1 Y 1 B LYS 60 ? NZ ? B LYS 42 NZ 24 1 Y 1 B GLN 62 ? CG ? B GLN 44 CG 25 1 Y 1 B GLN 62 ? CD ? B GLN 44 CD 26 1 Y 1 B GLN 62 ? OE1 ? B GLN 44 OE1 27 1 Y 1 B GLN 62 ? NE2 ? B GLN 44 NE2 28 1 Y 1 B LYS 71 ? CG ? B LYS 53 CG 29 1 Y 1 B LYS 71 ? CD ? B LYS 53 CD 30 1 Y 1 B LYS 71 ? CE ? B LYS 53 CE 31 1 Y 1 B LYS 71 ? NZ ? B LYS 53 NZ 32 1 Y 1 B LYS 86 ? CG ? B LYS 68 CG 33 1 Y 1 B LYS 86 ? CD ? B LYS 68 CD 34 1 Y 1 B LYS 86 ? CE ? B LYS 68 CE 35 1 Y 1 B LYS 86 ? NZ ? B LYS 68 NZ 36 1 Y 1 B LYS 90 ? CG ? B LYS 72 CG 37 1 Y 1 B LYS 90 ? CD ? B LYS 72 CD 38 1 Y 1 B LYS 90 ? CE ? B LYS 72 CE 39 1 Y 1 B LYS 90 ? NZ ? B LYS 72 NZ 40 1 Y 1 B GLU 93 ? CG ? B GLU 75 CG 41 1 Y 1 B GLU 93 ? CD ? B GLU 75 CD 42 1 Y 1 B GLU 93 ? OE1 ? B GLU 75 OE1 43 1 Y 1 B GLU 93 ? OE2 ? B GLU 75 OE2 44 1 Y 1 B LYS 124 ? CD ? B LYS 106 CD 45 1 Y 1 B LYS 124 ? CE ? B LYS 106 CE 46 1 Y 1 B LYS 124 ? NZ ? B LYS 106 NZ 47 1 Y 1 B GLN 128 ? CD ? B GLN 110 CD 48 1 Y 1 B GLN 128 ? OE1 ? B GLN 110 OE1 49 1 Y 1 B GLN 128 ? NE2 ? B GLN 110 NE2 50 1 Y 1 B GLN 135 ? CG ? B GLN 117 CG 51 1 Y 1 B GLN 135 ? CD ? B GLN 117 CD 52 1 Y 1 B GLN 135 ? OE1 ? B GLN 117 OE1 53 1 Y 1 B GLN 135 ? NE2 ? B GLN 117 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 19 ? A SER 1 2 1 Y 1 A MET 20 ? A MET 2 3 1 Y 1 A ASN 21 ? A ASN 3 4 1 Y 1 A THR 22 ? A THR 4 5 1 Y 1 A LYS 23 ? A LYS 5 6 1 Y 1 A LYS 24 ? A LYS 6 7 1 Y 1 A ASN 25 ? A ASN 7 8 1 Y 1 A GLY 26 ? A GLY 8 9 1 Y 1 A ARG 27 ? A ARG 9 10 1 Y 1 A LEU 28 ? A LEU 10 11 1 Y 1 A GLN 135 ? A GLN 117 12 1 Y 1 A GLU 136 ? A GLU 118 13 1 Y 1 A GLU 137 ? A GLU 119 14 1 Y 1 B SER 19 ? B SER 1 15 1 Y 1 B MET 20 ? B MET 2 16 1 Y 1 B ASN 21 ? B ASN 3 17 1 Y 1 B THR 22 ? B THR 4 18 1 Y 1 B LYS 23 ? B LYS 5 19 1 Y 1 B LYS 24 ? B LYS 6 20 1 Y 1 B ASN 25 ? B ASN 7 21 1 Y 1 B GLY 26 ? B GLY 8 22 1 Y 1 B ARG 27 ? B ARG 9 23 1 Y 1 B LEU 28 ? B LEU 10 24 1 Y 1 B GLU 136 ? B GLU 118 25 1 Y 1 B GLU 137 ? B GLU 119 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 JQ1 CAA C N N 183 JQ1 CAB C N N 184 JQ1 CAC C N N 185 JQ1 CAD C N N 186 JQ1 CAE C N N 187 JQ1 CAF C N N 188 JQ1 OAG O N N 189 JQ1 CLAH CL N N 190 JQ1 CAI C Y N 191 JQ1 CAJ C Y N 192 JQ1 CAK C Y N 193 JQ1 CAL C Y N 194 JQ1 CAM C N N 195 JQ1 NAN N N N 196 JQ1 NAO N Y N 197 JQ1 NAP N Y N 198 JQ1 OAQ O N N 199 JQ1 SAR S Y N 200 JQ1 CAS C N N 201 JQ1 CAT C N N 202 JQ1 CAU C Y N 203 JQ1 CAV C Y N 204 JQ1 CAW C Y N 205 JQ1 CAX C Y N 206 JQ1 CAY C Y N 207 JQ1 CAZ C Y N 208 JQ1 CBA C Y N 209 JQ1 CBB C Y N 210 JQ1 CBC C N S 211 JQ1 NBD N Y N 212 JQ1 CBE C N N 213 JQ1 HAA H N N 214 JQ1 HAAA H N N 215 JQ1 HAAB H N N 216 JQ1 HAB H N N 217 JQ1 HABA H N N 218 JQ1 HABB H N N 219 JQ1 HAC H N N 220 JQ1 HACA H N N 221 JQ1 HACB H N N 222 JQ1 HAD H N N 223 JQ1 HADA H N N 224 JQ1 HADB H N N 225 JQ1 HAE H N N 226 JQ1 HAEA H N N 227 JQ1 HAEB H N N 228 JQ1 HAF H N N 229 JQ1 HAFA H N N 230 JQ1 HAFB H N N 231 JQ1 HAI H N N 232 JQ1 HAJ H N N 233 JQ1 HAK H N N 234 JQ1 HAL H N N 235 JQ1 HAM H N N 236 JQ1 HAMA H N N 237 JQ1 HNAP H N N 238 JQ1 HBC H N N 239 K K K N N 240 LEU N N N N 241 LEU CA C N S 242 LEU C C N N 243 LEU O O N N 244 LEU CB C N N 245 LEU CG C N N 246 LEU CD1 C N N 247 LEU CD2 C N N 248 LEU OXT O N N 249 LEU H H N N 250 LEU H2 H N N 251 LEU HA H N N 252 LEU HB2 H N N 253 LEU HB3 H N N 254 LEU HG H N N 255 LEU HD11 H N N 256 LEU HD12 H N N 257 LEU HD13 H N N 258 LEU HD21 H N N 259 LEU HD22 H N N 260 LEU HD23 H N N 261 LEU HXT H N N 262 LYS N N N N 263 LYS CA C N S 264 LYS C C N N 265 LYS O O N N 266 LYS CB C N N 267 LYS CG C N N 268 LYS CD C N N 269 LYS CE C N N 270 LYS NZ N N N 271 LYS OXT O N N 272 LYS H H N N 273 LYS H2 H N N 274 LYS HA H N N 275 LYS HB2 H N N 276 LYS HB3 H N N 277 LYS HG2 H N N 278 LYS HG3 H N N 279 LYS HD2 H N N 280 LYS HD3 H N N 281 LYS HE2 H N N 282 LYS HE3 H N N 283 LYS HZ1 H N N 284 LYS HZ2 H N N 285 LYS HZ3 H N N 286 LYS HXT H N N 287 MET N N N N 288 MET CA C N S 289 MET C C N N 290 MET O O N N 291 MET CB C N N 292 MET CG C N N 293 MET SD S N N 294 MET CE C N N 295 MET OXT O N N 296 MET H H N N 297 MET H2 H N N 298 MET HA H N N 299 MET HB2 H N N 300 MET HB3 H N N 301 MET HG2 H N N 302 MET HG3 H N N 303 MET HE1 H N N 304 MET HE2 H N N 305 MET HE3 H N N 306 MET HXT H N N 307 PHE N N N N 308 PHE CA C N S 309 PHE C C N N 310 PHE O O N N 311 PHE CB C N N 312 PHE CG C Y N 313 PHE CD1 C Y N 314 PHE CD2 C Y N 315 PHE CE1 C Y N 316 PHE CE2 C Y N 317 PHE CZ C Y N 318 PHE OXT O N N 319 PHE H H N N 320 PHE H2 H N N 321 PHE HA H N N 322 PHE HB2 H N N 323 PHE HB3 H N N 324 PHE HD1 H N N 325 PHE HD2 H N N 326 PHE HE1 H N N 327 PHE HE2 H N N 328 PHE HZ H N N 329 PHE HXT H N N 330 PRO N N N N 331 PRO CA C N S 332 PRO C C N N 333 PRO O O N N 334 PRO CB C N N 335 PRO CG C N N 336 PRO CD C N N 337 PRO OXT O N N 338 PRO H H N N 339 PRO HA H N N 340 PRO HB2 H N N 341 PRO HB3 H N N 342 PRO HG2 H N N 343 PRO HG3 H N N 344 PRO HD2 H N N 345 PRO HD3 H N N 346 PRO HXT H N N 347 SER N N N N 348 SER CA C N S 349 SER C C N N 350 SER O O N N 351 SER CB C N N 352 SER OG O N N 353 SER OXT O N N 354 SER H H N N 355 SER H2 H N N 356 SER HA H N N 357 SER HB2 H N N 358 SER HB3 H N N 359 SER HG H N N 360 SER HXT H N N 361 THR N N N N 362 THR CA C N S 363 THR C C N N 364 THR O O N N 365 THR CB C N R 366 THR OG1 O N N 367 THR CG2 C N N 368 THR OXT O N N 369 THR H H N N 370 THR H2 H N N 371 THR HA H N N 372 THR HB H N N 373 THR HG1 H N N 374 THR HG21 H N N 375 THR HG22 H N N 376 THR HG23 H N N 377 THR HXT H N N 378 TRP N N N N 379 TRP CA C N S 380 TRP C C N N 381 TRP O O N N 382 TRP CB C N N 383 TRP CG C Y N 384 TRP CD1 C Y N 385 TRP CD2 C Y N 386 TRP NE1 N Y N 387 TRP CE2 C Y N 388 TRP CE3 C Y N 389 TRP CZ2 C Y N 390 TRP CZ3 C Y N 391 TRP CH2 C Y N 392 TRP OXT O N N 393 TRP H H N N 394 TRP H2 H N N 395 TRP HA H N N 396 TRP HB2 H N N 397 TRP HB3 H N N 398 TRP HD1 H N N 399 TRP HE1 H N N 400 TRP HE3 H N N 401 TRP HZ2 H N N 402 TRP HZ3 H N N 403 TRP HH2 H N N 404 TRP HXT H N N 405 TYR N N N N 406 TYR CA C N S 407 TYR C C N N 408 TYR O O N N 409 TYR CB C N N 410 TYR CG C Y N 411 TYR CD1 C Y N 412 TYR CD2 C Y N 413 TYR CE1 C Y N 414 TYR CE2 C Y N 415 TYR CZ C Y N 416 TYR OH O N N 417 TYR OXT O N N 418 TYR H H N N 419 TYR H2 H N N 420 TYR HA H N N 421 TYR HB2 H N N 422 TYR HB3 H N N 423 TYR HD1 H N N 424 TYR HD2 H N N 425 TYR HE1 H N N 426 TYR HE2 H N N 427 TYR HH H N N 428 TYR HXT H N N 429 VAL N N N N 430 VAL CA C N S 431 VAL C C N N 432 VAL O O N N 433 VAL CB C N N 434 VAL CG1 C N N 435 VAL CG2 C N N 436 VAL OXT O N N 437 VAL H H N N 438 VAL H2 H N N 439 VAL HA H N N 440 VAL HB H N N 441 VAL HG11 H N N 442 VAL HG12 H N N 443 VAL HG13 H N N 444 VAL HG21 H N N 445 VAL HG22 H N N 446 VAL HG23 H N N 447 VAL HXT H N N 448 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 JQ1 CAA CAV sing N N 173 JQ1 CAB CAX sing N N 174 JQ1 CAC CAY sing N N 175 JQ1 CAD CBE sing N N 176 JQ1 CAE CBE sing N N 177 JQ1 CAF CBE sing N N 178 JQ1 OAG CAS doub N N 179 JQ1 CLAH CAU sing N N 180 JQ1 CAI CAK doub Y N 181 JQ1 CAI CAU sing Y N 182 JQ1 CAJ CAL sing Y N 183 JQ1 CAJ CAU doub Y N 184 JQ1 CAK CAW sing Y N 185 JQ1 CAL CAW doub Y N 186 JQ1 CAM CAS sing N N 187 JQ1 CAM CBC sing N N 188 JQ1 NAN CAT doub N N 189 JQ1 NAN CBC sing N N 190 JQ1 NAO NAP sing Y N 191 JQ1 NAO CAV doub Y N 192 JQ1 NAP CAZ sing Y N 193 JQ1 OAQ CAS sing N N 194 JQ1 OAQ CBE sing N N 195 JQ1 SAR CAX sing Y N 196 JQ1 SAR CBB sing Y N 197 JQ1 CAT CAW sing N N 198 JQ1 CAT CBA sing N N 199 JQ1 CAV NBD sing Y N 200 JQ1 CAX CAY doub Y N 201 JQ1 CAY CBA sing Y N 202 JQ1 CAZ CBC sing N N 203 JQ1 CAZ NBD doub Y N 204 JQ1 CBA CBB doub Y N 205 JQ1 CBB NBD sing Y N 206 JQ1 CAA HAA sing N N 207 JQ1 CAA HAAA sing N N 208 JQ1 CAA HAAB sing N N 209 JQ1 CAB HAB sing N N 210 JQ1 CAB HABA sing N N 211 JQ1 CAB HABB sing N N 212 JQ1 CAC HAC sing N N 213 JQ1 CAC HACA sing N N 214 JQ1 CAC HACB sing N N 215 JQ1 CAD HAD sing N N 216 JQ1 CAD HADA sing N N 217 JQ1 CAD HADB sing N N 218 JQ1 CAE HAE sing N N 219 JQ1 CAE HAEA sing N N 220 JQ1 CAE HAEB sing N N 221 JQ1 CAF HAF sing N N 222 JQ1 CAF HAFA sing N N 223 JQ1 CAF HAFB sing N N 224 JQ1 CAI HAI sing N N 225 JQ1 CAJ HAJ sing N N 226 JQ1 CAK HAK sing N N 227 JQ1 CAL HAL sing N N 228 JQ1 CAM HAM sing N N 229 JQ1 CAM HAMA sing N N 230 JQ1 NAP HNAP sing N N 231 JQ1 CBC HBC sing N N 232 LEU N CA sing N N 233 LEU N H sing N N 234 LEU N H2 sing N N 235 LEU CA C sing N N 236 LEU CA CB sing N N 237 LEU CA HA sing N N 238 LEU C O doub N N 239 LEU C OXT sing N N 240 LEU CB CG sing N N 241 LEU CB HB2 sing N N 242 LEU CB HB3 sing N N 243 LEU CG CD1 sing N N 244 LEU CG CD2 sing N N 245 LEU CG HG sing N N 246 LEU CD1 HD11 sing N N 247 LEU CD1 HD12 sing N N 248 LEU CD1 HD13 sing N N 249 LEU CD2 HD21 sing N N 250 LEU CD2 HD22 sing N N 251 LEU CD2 HD23 sing N N 252 LEU OXT HXT sing N N 253 LYS N CA sing N N 254 LYS N H sing N N 255 LYS N H2 sing N N 256 LYS CA C sing N N 257 LYS CA CB sing N N 258 LYS CA HA sing N N 259 LYS C O doub N N 260 LYS C OXT sing N N 261 LYS CB CG sing N N 262 LYS CB HB2 sing N N 263 LYS CB HB3 sing N N 264 LYS CG CD sing N N 265 LYS CG HG2 sing N N 266 LYS CG HG3 sing N N 267 LYS CD CE sing N N 268 LYS CD HD2 sing N N 269 LYS CD HD3 sing N N 270 LYS CE NZ sing N N 271 LYS CE HE2 sing N N 272 LYS CE HE3 sing N N 273 LYS NZ HZ1 sing N N 274 LYS NZ HZ2 sing N N 275 LYS NZ HZ3 sing N N 276 LYS OXT HXT sing N N 277 MET N CA sing N N 278 MET N H sing N N 279 MET N H2 sing N N 280 MET CA C sing N N 281 MET CA CB sing N N 282 MET CA HA sing N N 283 MET C O doub N N 284 MET C OXT sing N N 285 MET CB CG sing N N 286 MET CB HB2 sing N N 287 MET CB HB3 sing N N 288 MET CG SD sing N N 289 MET CG HG2 sing N N 290 MET CG HG3 sing N N 291 MET SD CE sing N N 292 MET CE HE1 sing N N 293 MET CE HE2 sing N N 294 MET CE HE3 sing N N 295 MET OXT HXT sing N N 296 PHE N CA sing N N 297 PHE N H sing N N 298 PHE N H2 sing N N 299 PHE CA C sing N N 300 PHE CA CB sing N N 301 PHE CA HA sing N N 302 PHE C O doub N N 303 PHE C OXT sing N N 304 PHE CB CG sing N N 305 PHE CB HB2 sing N N 306 PHE CB HB3 sing N N 307 PHE CG CD1 doub Y N 308 PHE CG CD2 sing Y N 309 PHE CD1 CE1 sing Y N 310 PHE CD1 HD1 sing N N 311 PHE CD2 CE2 doub Y N 312 PHE CD2 HD2 sing N N 313 PHE CE1 CZ doub Y N 314 PHE CE1 HE1 sing N N 315 PHE CE2 CZ sing Y N 316 PHE CE2 HE2 sing N N 317 PHE CZ HZ sing N N 318 PHE OXT HXT sing N N 319 PRO N CA sing N N 320 PRO N CD sing N N 321 PRO N H sing N N 322 PRO CA C sing N N 323 PRO CA CB sing N N 324 PRO CA HA sing N N 325 PRO C O doub N N 326 PRO C OXT sing N N 327 PRO CB CG sing N N 328 PRO CB HB2 sing N N 329 PRO CB HB3 sing N N 330 PRO CG CD sing N N 331 PRO CG HG2 sing N N 332 PRO CG HG3 sing N N 333 PRO CD HD2 sing N N 334 PRO CD HD3 sing N N 335 PRO OXT HXT sing N N 336 SER N CA sing N N 337 SER N H sing N N 338 SER N H2 sing N N 339 SER CA C sing N N 340 SER CA CB sing N N 341 SER CA HA sing N N 342 SER C O doub N N 343 SER C OXT sing N N 344 SER CB OG sing N N 345 SER CB HB2 sing N N 346 SER CB HB3 sing N N 347 SER OG HG sing N N 348 SER OXT HXT sing N N 349 THR N CA sing N N 350 THR N H sing N N 351 THR N H2 sing N N 352 THR CA C sing N N 353 THR CA CB sing N N 354 THR CA HA sing N N 355 THR C O doub N N 356 THR C OXT sing N N 357 THR CB OG1 sing N N 358 THR CB CG2 sing N N 359 THR CB HB sing N N 360 THR OG1 HG1 sing N N 361 THR CG2 HG21 sing N N 362 THR CG2 HG22 sing N N 363 THR CG2 HG23 sing N N 364 THR OXT HXT sing N N 365 TRP N CA sing N N 366 TRP N H sing N N 367 TRP N H2 sing N N 368 TRP CA C sing N N 369 TRP CA CB sing N N 370 TRP CA HA sing N N 371 TRP C O doub N N 372 TRP C OXT sing N N 373 TRP CB CG sing N N 374 TRP CB HB2 sing N N 375 TRP CB HB3 sing N N 376 TRP CG CD1 doub Y N 377 TRP CG CD2 sing Y N 378 TRP CD1 NE1 sing Y N 379 TRP CD1 HD1 sing N N 380 TRP CD2 CE2 doub Y N 381 TRP CD2 CE3 sing Y N 382 TRP NE1 CE2 sing Y N 383 TRP NE1 HE1 sing N N 384 TRP CE2 CZ2 sing Y N 385 TRP CE3 CZ3 doub Y N 386 TRP CE3 HE3 sing N N 387 TRP CZ2 CH2 doub Y N 388 TRP CZ2 HZ2 sing N N 389 TRP CZ3 CH2 sing Y N 390 TRP CZ3 HZ3 sing N N 391 TRP CH2 HH2 sing N N 392 TRP OXT HXT sing N N 393 TYR N CA sing N N 394 TYR N H sing N N 395 TYR N H2 sing N N 396 TYR CA C sing N N 397 TYR CA CB sing N N 398 TYR CA HA sing N N 399 TYR C O doub N N 400 TYR C OXT sing N N 401 TYR CB CG sing N N 402 TYR CB HB2 sing N N 403 TYR CB HB3 sing N N 404 TYR CG CD1 doub Y N 405 TYR CG CD2 sing Y N 406 TYR CD1 CE1 sing Y N 407 TYR CD1 HD1 sing N N 408 TYR CD2 CE2 doub Y N 409 TYR CD2 HD2 sing N N 410 TYR CE1 CZ doub Y N 411 TYR CE1 HE1 sing N N 412 TYR CE2 CZ sing Y N 413 TYR CE2 HE2 sing N N 414 TYR CZ OH sing N N 415 TYR OH HH sing N N 416 TYR OXT HXT sing N N 417 VAL N CA sing N N 418 VAL N H sing N N 419 VAL N H2 sing N N 420 VAL CA C sing N N 421 VAL CA CB sing N N 422 VAL CA HA sing N N 423 VAL C O doub N N 424 VAL C OXT sing N N 425 VAL CB CG1 sing N N 426 VAL CB CG2 sing N N 427 VAL CB HB sing N N 428 VAL CG1 HG11 sing N N 429 VAL CG1 HG12 sing N N 430 VAL CG1 HG13 sing N N 431 VAL CG2 HG21 sing N N 432 VAL CG2 HG22 sing N N 433 VAL CG2 HG23 sing N N 434 VAL OXT HXT sing N N 435 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(6S)-6-(2-tert-butoxy-2-oxoethyl)-4-(4-chlorophenyl)-2,3,9-trimethyl-6,7-dihydrothieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-10-ium ; JQ1 3 'POTASSIUM ION' K 4 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 2RFJ 'Ensemble of 2RFJ, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 2 ? 'experimental model' PDB 2OSS 'Ensemble of 2RFJ, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 3 ? 'experimental model' PDB 2OUO 'Ensemble of 2RFJ, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 4 ? 'experimental model' PDB 2GRC 'Ensemble of 2RFJ, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 5 ? 'experimental model' PDB 2OO1 'Ensemble of 2RFJ, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 6 ? 'experimental model' PDB 3DAI 'Ensemble of 2RFJ, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 7 ? 'experimental model' PDB 3D7C 'Ensemble of 2RFJ, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 8 ? 'experimental model' PDB 3DWY 'Ensemble of 2RFJ, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' #