data_4G1A # _entry.id 4G1A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4G1A pdb_00004g1a 10.2210/pdb4g1a/pdb RCSB RCSB073611 ? ? WWPDB D_1000073611 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-05 2 'Structure model' 1 1 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_struct_conn_angle 5 2 'Structure model' struct_conn 6 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 2 'Structure model' '_pdbx_struct_conn_angle.value' 21 2 'Structure model' '_struct_conn.pdbx_dist_value' 22 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 36 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 37 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 38 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4G1A _pdbx_database_status.recvd_initial_deposition_date 2012-07-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ni, S.' 1 'Kennedy, M.A.' 2 'Ogawa, M.Y.' 3 # _citation.id primary _citation.title ;Metal-binding properties and structural characterization of a self-assembled coiled coil: Formation of a polynuclear Cd-thiolate cluster. ; _citation.journal_abbrev J.Inorg.Biochem. _citation.journal_volume 119C _citation.page_first 1 _citation.page_last 9 _citation.year 2012 _citation.journal_id_ASTM JIBIDJ _citation.country US _citation.journal_id_ISSN 0162-0134 _citation.journal_id_CSD 0525 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23160144 _citation.pdbx_database_id_DOI 10.1016/j.jinorgbio.2012.10.010 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zaytsev, D.V.' 1 ? primary 'Morozov, V.A.' 2 ? primary 'Fan, J.' 3 ? primary 'Zhu, X.' 4 ? primary 'Mukherjee, M.' 5 ? primary 'Ni, S.' 6 ? primary 'Kennedy, M.A.' 7 ? primary 'Ogawa, M.Y.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'AQ-C16C19 peptide' 3422.966 3 ? ? ? ? 2 non-polymer syn 'CADMIUM ION' 112.411 4 ? ? ? ? 3 water nat water 18.015 10 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code QIAALEQKIAALEQKCAACEQKIAALEQKGGY _entity_poly.pdbx_seq_one_letter_code_can QIAALEQKIAALEQKCAACEQKIAALEQKGGY _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CADMIUM ION' CD 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ILE n 1 3 ALA n 1 4 ALA n 1 5 LEU n 1 6 GLU n 1 7 GLN n 1 8 LYS n 1 9 ILE n 1 10 ALA n 1 11 ALA n 1 12 LEU n 1 13 GLU n 1 14 GLN n 1 15 LYS n 1 16 CYS n 1 17 ALA n 1 18 ALA n 1 19 CYS n 1 20 GLU n 1 21 GLN n 1 22 LYS n 1 23 ILE n 1 24 ALA n 1 25 ALA n 1 26 LEU n 1 27 GLU n 1 28 GLN n 1 29 LYS n 1 30 GLY n 1 31 GLY n 1 32 TYR n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'Peptide synthesis was done using an Applied Biosystems 433A and purified on a preparative C18 reverse phase HPLC.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 ? ? ? A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 CYS 16 16 16 CYS CYS A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 CYS 19 19 19 CYS CYS A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 GLN 28 28 ? ? ? A . n A 1 29 LYS 29 29 ? ? ? A . n A 1 30 GLY 30 30 ? ? ? A . n A 1 31 GLY 31 31 ? ? ? A . n A 1 32 TYR 32 32 ? ? ? A . n B 1 1 GLN 1 1 ? ? ? B . n B 1 2 ILE 2 2 ? ? ? B . n B 1 3 ALA 3 3 ? ? ? B . n B 1 4 ALA 4 4 4 ALA ALA B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 GLU 6 6 6 GLU GLU B . n B 1 7 GLN 7 7 7 GLN GLN B . n B 1 8 LYS 8 8 8 LYS LYS B . n B 1 9 ILE 9 9 9 ILE ILE B . n B 1 10 ALA 10 10 10 ALA ALA B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 GLU 13 13 13 GLU GLU B . n B 1 14 GLN 14 14 14 GLN GLN B . n B 1 15 LYS 15 15 15 LYS LYS B . n B 1 16 CYS 16 16 16 CYS CYS B . n B 1 17 ALA 17 17 17 ALA ALA B . n B 1 18 ALA 18 18 18 ALA ALA B . n B 1 19 CYS 19 19 19 CYS CYS B . n B 1 20 GLU 20 20 20 GLU GLU B . n B 1 21 GLN 21 21 21 GLN GLN B . n B 1 22 LYS 22 22 22 LYS LYS B . n B 1 23 ILE 23 23 23 ILE ILE B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 GLU 27 27 27 GLU GLU B . n B 1 28 GLN 28 28 ? ? ? B . n B 1 29 LYS 29 29 ? ? ? B . n B 1 30 GLY 30 30 ? ? ? B . n B 1 31 GLY 31 31 ? ? ? B . n B 1 32 TYR 32 32 ? ? ? B . n C 1 1 GLN 1 1 ? ? ? C . n C 1 2 ILE 2 2 ? ? ? C . n C 1 3 ALA 3 3 3 ALA ALA C . n C 1 4 ALA 4 4 4 ALA ALA C . n C 1 5 LEU 5 5 5 LEU LEU C . n C 1 6 GLU 6 6 6 GLU GLU C . n C 1 7 GLN 7 7 7 GLN GLN C . n C 1 8 LYS 8 8 8 LYS LYS C . n C 1 9 ILE 9 9 9 ILE ILE C . n C 1 10 ALA 10 10 10 ALA ALA C . n C 1 11 ALA 11 11 11 ALA ALA C . n C 1 12 LEU 12 12 12 LEU LEU C . n C 1 13 GLU 13 13 13 GLU GLU C . n C 1 14 GLN 14 14 14 GLN GLN C . n C 1 15 LYS 15 15 15 LYS LYS C . n C 1 16 CYS 16 16 16 CYS CYS C . n C 1 17 ALA 17 17 17 ALA ALA C . n C 1 18 ALA 18 18 18 ALA ALA C . n C 1 19 CYS 19 19 19 CYS CYS C . n C 1 20 GLU 20 20 20 GLU GLU C . n C 1 21 GLN 21 21 21 GLN GLN C . n C 1 22 LYS 22 22 22 LYS LYS C . n C 1 23 ILE 23 23 23 ILE ILE C . n C 1 24 ALA 24 24 24 ALA ALA C . n C 1 25 ALA 25 25 25 ALA ALA C . n C 1 26 LEU 26 26 26 LEU LEU C . n C 1 27 GLU 27 27 27 GLU GLU C . n C 1 28 GLN 28 28 28 GLN GLN C . n C 1 29 LYS 29 29 29 LYS LYS C . n C 1 30 GLY 30 30 ? ? ? C . n C 1 31 GLY 31 31 ? ? ? C . n C 1 32 TYR 32 32 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CD 1 101 1 CD CD A . E 2 CD 1 102 2 CD CD A . F 2 CD 1 101 4 CD CD B . G 2 CD 1 101 3 CD CD C . H 3 HOH 1 201 2 HOH HOH A . H 3 HOH 2 202 16 HOH HOH A . I 3 HOH 1 201 3 HOH HOH B . I 3 HOH 2 202 9 HOH HOH B . I 3 HOH 3 203 15 HOH HOH B . J 3 HOH 1 201 4 HOH HOH C . J 3 HOH 2 202 5 HOH HOH C . J 3 HOH 3 203 8 HOH HOH C . J 3 HOH 4 204 13 HOH HOH C . J 3 HOH 5 205 14 HOH HOH C . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal 'PROTEUM PLUS' 'data collection' PLUS ? 1 SHELXS phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 SAINT 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _cell.entry_id 4G1A _cell.length_a 30.762 _cell.length_b 35.204 _cell.length_c 64.123 _cell.angle_alpha 90.00 _cell.angle_beta 97.49 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4G1A _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4G1A _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.68 _exptl_crystal.density_percent_sol 26.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '100mM HEPES pH 7.5 and 1.5-2.0M ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRUKER SMART 6000' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details 'Montel200 mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'BRUKER AXS MICROSTAR' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 4G1A _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 23.05 _reflns.d_resolution_high 1.85 _reflns.number_obs 5702 _reflns.number_all 5926 _reflns.percent_possible_obs 96.2 _reflns.pdbx_Rmerge_I_obs 0.025 _reflns.pdbx_Rsym_value 0.087 _reflns.pdbx_netI_over_sigmaI 42.9 _reflns.B_iso_Wilson_estimate 18.85 _reflns.pdbx_redundancy 55.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.91 _reflns_shell.percent_possible_all 71 _reflns_shell.Rmerge_I_obs 0.25 _reflns_shell.pdbx_Rsym_value 0.25 _reflns_shell.meanI_over_sigI_obs 4.21 _reflns_shell.pdbx_redundancy 3.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 449 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4G1A _refine.ls_number_reflns_obs 4707 _refine.ls_number_reflns_all 4707 _refine.pdbx_ls_sigma_I 3 _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.05 _refine.ls_d_res_high 1.85 _refine.ls_percent_reflns_obs 83.23 _refine.ls_R_factor_obs 0.19437 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19133 _refine.ls_R_factor_R_free 0.25244 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.5 _refine.ls_number_reflns_R_free 223 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.933 _refine.correlation_coeff_Fo_to_Fc_free 0.870 _refine.B_iso_mean 18.851 _refine.aniso_B[1][1] 1.45 _refine.aniso_B[2][2] -2.12 _refine.aniso_B[3][3] 0.72 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.20 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.177 _refine.overall_SU_ML 0.119 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 8.760 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 567 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 10 _refine_hist.number_atoms_total 581 _refine_hist.d_res_high 1.85 _refine_hist.d_res_low 23.05 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.021 0.022 ? 564 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.786 1.998 ? 750 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.236 5.000 ? 74 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 48.388 30.000 ? 22 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 21.312 15.000 ? 122 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_chiral_restr 0.114 0.200 ? 93 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.020 ? 384 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1.349 1.500 ? 382 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2.381 2.000 ? 591 ? 'X-RAY DIFFRACTION' r_scbond_it 4.623 3.000 ? 182 ? 'X-RAY DIFFRACTION' r_scangle_it 7.848 4.500 ? 159 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 2.203 3.000 ? 564 ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.850 _refine_ls_shell.d_res_low 1.91 _refine_ls_shell.number_reflns_R_work 154 _refine_ls_shell.R_factor_R_work 0.159 _refine_ls_shell.percent_reflns_obs 71 _refine_ls_shell.R_factor_R_free 0.180 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 3 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 319 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4G1A _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4G1A _struct.title 'Metal-binding properties of a self-assembled coiled coil: formation of a polynuclear Cd-thiolated cluster' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4G1A _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.text 'helical bundles, metallopeptide complexes, polynuclear metal-binding, Cd(II), self-assembly, METAL BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 3 ? J N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4G1A _struct_ref.pdbx_db_accession 4G1A _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code QIAALEQKIAALEQKCAACEQKIAALEQKGGY _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4G1A A 1 ? 32 ? 4G1A 1 ? 32 ? 1 32 2 1 4G1A B 1 ? 32 ? 4G1A 1 ? 32 ? 1 32 3 1 4G1A C 1 ? 32 ? 4G1A 1 ? 32 ? 1 32 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2960 ? 1 MORE -32 ? 1 'SSA (A^2)' 4990 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 2 ? CYS A 16 ? ILE A 2 CYS A 16 1 ? 15 HELX_P HELX_P2 2 ALA A 18 ? GLU A 27 ? ALA A 18 GLU A 27 1 ? 10 HELX_P HELX_P3 3 LEU B 5 ? CYS B 16 ? LEU B 5 CYS B 16 1 ? 12 HELX_P HELX_P4 4 ALA B 18 ? GLU B 27 ? ALA B 18 GLU B 27 1 ? 10 HELX_P HELX_P5 5 ALA C 4 ? CYS C 16 ? ALA C 4 CYS C 16 1 ? 13 HELX_P HELX_P6 6 ALA C 18 ? LYS C 29 ? ALA C 18 LYS C 29 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 16 SG ? ? ? 1_555 E CD . CD ? ? A CYS 16 A CD 102 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc2 metalc ? ? A CYS 16 SG ? ? ? 1_555 G CD . CD ? ? A CYS 16 C CD 101 1_555 ? ? ? ? ? ? ? 2.600 ? ? metalc3 metalc ? ? A CYS 19 SG ? ? ? 1_555 D CD . CD ? ? A CYS 19 A CD 101 1_555 ? ? ? ? ? ? ? 2.497 ? ? metalc4 metalc ? ? A CYS 19 SG ? ? ? 1_555 G CD . CD ? ? A CYS 19 C CD 101 1_555 ? ? ? ? ? ? ? 2.597 ? ? metalc5 metalc ? ? A GLU 20 OE1 ? ? ? 1_555 D CD . CD ? ? A GLU 20 A CD 101 1_555 ? ? ? ? ? ? ? 1.917 ? ? metalc6 metalc ? ? D CD . CD ? ? ? 1_555 B CYS 16 SG ? ? A CD 101 B CYS 16 1_555 ? ? ? ? ? ? ? 2.558 ? ? metalc7 metalc ? ? D CD . CD ? ? ? 1_555 B CYS 19 SG ? ? A CD 101 B CYS 19 1_555 ? ? ? ? ? ? ? 2.712 ? ? metalc8 metalc ? ? E CD . CD ? ? ? 1_555 H HOH . O ? ? A CD 102 A HOH 202 1_555 ? ? ? ? ? ? ? 2.457 ? ? metalc9 metalc ? ? E CD . CD ? ? ? 1_555 B CYS 16 SG ? ? A CD 102 B CYS 16 1_555 ? ? ? ? ? ? ? 2.449 ? ? metalc10 metalc ? ? E CD . CD ? ? ? 1_555 C CYS 16 SG ? ? A CD 102 C CYS 16 1_555 ? ? ? ? ? ? ? 2.492 ? ? metalc11 metalc ? ? B CYS 19 SG ? ? ? 1_555 F CD . CD ? ? B CYS 19 B CD 101 1_555 ? ? ? ? ? ? ? 2.402 ? ? metalc12 metalc ? ? B GLU 20 OE1 ? ? ? 1_555 F CD . CD ? ? B GLU 20 B CD 101 1_555 ? ? ? ? ? ? ? 2.085 ? ? metalc13 metalc ? ? B GLU 20 OE2 ? ? ? 1_555 F CD . CD ? ? B GLU 20 B CD 101 1_555 ? ? ? ? ? ? ? 2.474 ? ? metalc14 metalc ? ? F CD . CD ? ? ? 1_555 C CYS 16 SG ? ? B CD 101 C CYS 16 1_555 ? ? ? ? ? ? ? 2.642 ? ? metalc15 metalc ? ? F CD . CD ? ? ? 1_555 C CYS 19 SG ? ? B CD 101 C CYS 19 1_555 ? ? ? ? ? ? ? 2.466 ? ? metalc16 metalc ? ? C CYS 19 SG ? ? ? 1_555 G CD . CD ? ? C CYS 19 C CD 101 1_555 ? ? ? ? ? ? ? 2.429 ? ? metalc17 metalc ? ? C GLU 20 OE2 ? ? ? 1_555 G CD . CD ? ? C GLU 20 C CD 101 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc18 metalc ? ? C GLU 20 OE1 ? ? ? 1_555 G CD . CD ? ? C GLU 20 C CD 101 1_555 ? ? ? ? ? ? ? 2.609 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 16 ? A CYS 16 ? 1_555 CD ? E CD . ? A CD 102 ? 1_555 O ? H HOH . ? A HOH 202 ? 1_555 108.7 ? 2 SG ? A CYS 16 ? A CYS 16 ? 1_555 CD ? E CD . ? A CD 102 ? 1_555 SG ? B CYS 16 ? B CYS 16 ? 1_555 109.9 ? 3 O ? H HOH . ? A HOH 202 ? 1_555 CD ? E CD . ? A CD 102 ? 1_555 SG ? B CYS 16 ? B CYS 16 ? 1_555 105.5 ? 4 SG ? A CYS 16 ? A CYS 16 ? 1_555 CD ? E CD . ? A CD 102 ? 1_555 SG ? C CYS 16 ? C CYS 16 ? 1_555 113.1 ? 5 O ? H HOH . ? A HOH 202 ? 1_555 CD ? E CD . ? A CD 102 ? 1_555 SG ? C CYS 16 ? C CYS 16 ? 1_555 106.9 ? 6 SG ? B CYS 16 ? B CYS 16 ? 1_555 CD ? E CD . ? A CD 102 ? 1_555 SG ? C CYS 16 ? C CYS 16 ? 1_555 112.3 ? 7 SG ? A CYS 16 ? A CYS 16 ? 1_555 CD ? G CD . ? C CD 101 ? 1_555 SG ? A CYS 19 ? A CYS 19 ? 1_555 116.1 ? 8 SG ? A CYS 16 ? A CYS 16 ? 1_555 CD ? G CD . ? C CD 101 ? 1_555 SG ? C CYS 19 ? C CYS 19 ? 1_555 121.1 ? 9 SG ? A CYS 19 ? A CYS 19 ? 1_555 CD ? G CD . ? C CD 101 ? 1_555 SG ? C CYS 19 ? C CYS 19 ? 1_555 89.8 ? 10 SG ? A CYS 16 ? A CYS 16 ? 1_555 CD ? G CD . ? C CD 101 ? 1_555 OE2 ? C GLU 20 ? C GLU 20 ? 1_555 115.6 ? 11 SG ? A CYS 19 ? A CYS 19 ? 1_555 CD ? G CD . ? C CD 101 ? 1_555 OE2 ? C GLU 20 ? C GLU 20 ? 1_555 90.2 ? 12 SG ? C CYS 19 ? C CYS 19 ? 1_555 CD ? G CD . ? C CD 101 ? 1_555 OE2 ? C GLU 20 ? C GLU 20 ? 1_555 116.2 ? 13 SG ? A CYS 16 ? A CYS 16 ? 1_555 CD ? G CD . ? C CD 101 ? 1_555 OE1 ? C GLU 20 ? C GLU 20 ? 1_555 91.3 ? 14 SG ? A CYS 19 ? A CYS 19 ? 1_555 CD ? G CD . ? C CD 101 ? 1_555 OE1 ? C GLU 20 ? C GLU 20 ? 1_555 142.6 ? 15 SG ? C CYS 19 ? C CYS 19 ? 1_555 CD ? G CD . ? C CD 101 ? 1_555 OE1 ? C GLU 20 ? C GLU 20 ? 1_555 97.4 ? 16 OE2 ? C GLU 20 ? C GLU 20 ? 1_555 CD ? G CD . ? C CD 101 ? 1_555 OE1 ? C GLU 20 ? C GLU 20 ? 1_555 53.8 ? 17 SG ? A CYS 19 ? A CYS 19 ? 1_555 CD ? D CD . ? A CD 101 ? 1_555 OE1 ? A GLU 20 ? A GLU 20 ? 1_555 111.5 ? 18 SG ? A CYS 19 ? A CYS 19 ? 1_555 CD ? D CD . ? A CD 101 ? 1_555 SG ? B CYS 16 ? B CYS 16 ? 1_555 129.1 ? 19 OE1 ? A GLU 20 ? A GLU 20 ? 1_555 CD ? D CD . ? A CD 101 ? 1_555 SG ? B CYS 16 ? B CYS 16 ? 1_555 110.6 ? 20 SG ? A CYS 19 ? A CYS 19 ? 1_555 CD ? D CD . ? A CD 101 ? 1_555 SG ? B CYS 19 ? B CYS 19 ? 1_555 97.3 ? 21 OE1 ? A GLU 20 ? A GLU 20 ? 1_555 CD ? D CD . ? A CD 101 ? 1_555 SG ? B CYS 19 ? B CYS 19 ? 1_555 93.9 ? 22 SG ? B CYS 16 ? B CYS 16 ? 1_555 CD ? D CD . ? A CD 101 ? 1_555 SG ? B CYS 19 ? B CYS 19 ? 1_555 107.1 ? 23 SG ? B CYS 19 ? B CYS 19 ? 1_555 CD ? F CD . ? B CD 101 ? 1_555 OE1 ? B GLU 20 ? B GLU 20 ? 1_555 113.8 ? 24 SG ? B CYS 19 ? B CYS 19 ? 1_555 CD ? F CD . ? B CD 101 ? 1_555 OE2 ? B GLU 20 ? B GLU 20 ? 1_555 87.5 ? 25 OE1 ? B GLU 20 ? B GLU 20 ? 1_555 CD ? F CD . ? B CD 101 ? 1_555 OE2 ? B GLU 20 ? B GLU 20 ? 1_555 56.6 ? 26 SG ? B CYS 19 ? B CYS 19 ? 1_555 CD ? F CD . ? B CD 101 ? 1_555 SG ? C CYS 16 ? C CYS 16 ? 1_555 120.9 ? 27 OE1 ? B GLU 20 ? B GLU 20 ? 1_555 CD ? F CD . ? B CD 101 ? 1_555 SG ? C CYS 16 ? C CYS 16 ? 1_555 111.7 ? 28 OE2 ? B GLU 20 ? B GLU 20 ? 1_555 CD ? F CD . ? B CD 101 ? 1_555 SG ? C CYS 16 ? C CYS 16 ? 1_555 87.8 ? 29 SG ? B CYS 19 ? B CYS 19 ? 1_555 CD ? F CD . ? B CD 101 ? 1_555 SG ? C CYS 19 ? C CYS 19 ? 1_555 100.5 ? 30 OE1 ? B GLU 20 ? B GLU 20 ? 1_555 CD ? F CD . ? B CD 101 ? 1_555 SG ? C CYS 19 ? C CYS 19 ? 1_555 92.4 ? 31 OE2 ? B GLU 20 ? B GLU 20 ? 1_555 CD ? F CD . ? B CD 101 ? 1_555 SG ? C CYS 19 ? C CYS 19 ? 1_555 148.1 ? 32 SG ? C CYS 16 ? C CYS 16 ? 1_555 CD ? F CD . ? B CD 101 ? 1_555 SG ? C CYS 19 ? C CYS 19 ? 1_555 113.1 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CD 101 ? 4 'BINDING SITE FOR RESIDUE CD A 101' AC2 Software A CD 102 ? 4 'BINDING SITE FOR RESIDUE CD A 102' AC3 Software B CD 101 ? 4 'BINDING SITE FOR RESIDUE CD B 101' AC4 Software C CD 101 ? 4 'BINDING SITE FOR RESIDUE CD C 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 19 ? CYS A 19 . ? 1_555 ? 2 AC1 4 GLU A 20 ? GLU A 20 . ? 1_555 ? 3 AC1 4 CYS B 16 ? CYS B 16 . ? 1_555 ? 4 AC1 4 CYS B 19 ? CYS B 19 . ? 1_555 ? 5 AC2 4 CYS A 16 ? CYS A 16 . ? 1_555 ? 6 AC2 4 HOH H . ? HOH A 202 . ? 1_555 ? 7 AC2 4 CYS B 16 ? CYS B 16 . ? 1_555 ? 8 AC2 4 CYS C 16 ? CYS C 16 . ? 1_555 ? 9 AC3 4 CYS B 19 ? CYS B 19 . ? 1_555 ? 10 AC3 4 GLU B 20 ? GLU B 20 . ? 1_555 ? 11 AC3 4 CYS C 16 ? CYS C 16 . ? 1_555 ? 12 AC3 4 CYS C 19 ? CYS C 19 . ? 1_555 ? 13 AC4 4 CYS A 16 ? CYS A 16 . ? 1_555 ? 14 AC4 4 CYS A 19 ? CYS A 19 . ? 1_555 ? 15 AC4 4 CYS C 19 ? CYS C 19 . ? 1_555 ? 16 AC4 4 GLU C 20 ? GLU C 20 . ? 1_555 ? # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 NE2 C GLN 7 ? ? 1_555 NE2 C GLN 7 ? ? 2_755 1.60 2 1 CD C GLN 7 ? ? 1_555 NE2 C GLN 7 ? ? 2_755 2.11 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A CYS 19 ? ? SG A CYS 19 ? ? 1.699 1.812 -0.113 0.016 N 2 1 CB C CYS 19 ? ? SG C CYS 19 ? ? 1.657 1.812 -0.155 0.016 N # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id C _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 203 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id J _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 1 ? A GLN 1 2 1 Y 1 A GLN 28 ? A GLN 28 3 1 Y 1 A LYS 29 ? A LYS 29 4 1 Y 1 A GLY 30 ? A GLY 30 5 1 Y 1 A GLY 31 ? A GLY 31 6 1 Y 1 A TYR 32 ? A TYR 32 7 1 Y 1 B GLN 1 ? B GLN 1 8 1 Y 1 B ILE 2 ? B ILE 2 9 1 Y 1 B ALA 3 ? B ALA 3 10 1 Y 1 B GLN 28 ? B GLN 28 11 1 Y 1 B LYS 29 ? B LYS 29 12 1 Y 1 B GLY 30 ? B GLY 30 13 1 Y 1 B GLY 31 ? B GLY 31 14 1 Y 1 B TYR 32 ? B TYR 32 15 1 Y 1 C GLN 1 ? C GLN 1 16 1 Y 1 C ILE 2 ? C ILE 2 17 1 Y 1 C GLY 30 ? C GLY 30 18 1 Y 1 C GLY 31 ? C GLY 31 19 1 Y 1 C TYR 32 ? C TYR 32 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 CD CD CD N N 14 CYS N N N N 15 CYS CA C N R 16 CYS C C N N 17 CYS O O N N 18 CYS CB C N N 19 CYS SG S N N 20 CYS OXT O N N 21 CYS H H N N 22 CYS H2 H N N 23 CYS HA H N N 24 CYS HB2 H N N 25 CYS HB3 H N N 26 CYS HG H N N 27 CYS HXT H N N 28 GLN N N N N 29 GLN CA C N S 30 GLN C C N N 31 GLN O O N N 32 GLN CB C N N 33 GLN CG C N N 34 GLN CD C N N 35 GLN OE1 O N N 36 GLN NE2 N N N 37 GLN OXT O N N 38 GLN H H N N 39 GLN H2 H N N 40 GLN HA H N N 41 GLN HB2 H N N 42 GLN HB3 H N N 43 GLN HG2 H N N 44 GLN HG3 H N N 45 GLN HE21 H N N 46 GLN HE22 H N N 47 GLN HXT H N N 48 GLU N N N N 49 GLU CA C N S 50 GLU C C N N 51 GLU O O N N 52 GLU CB C N N 53 GLU CG C N N 54 GLU CD C N N 55 GLU OE1 O N N 56 GLU OE2 O N N 57 GLU OXT O N N 58 GLU H H N N 59 GLU H2 H N N 60 GLU HA H N N 61 GLU HB2 H N N 62 GLU HB3 H N N 63 GLU HG2 H N N 64 GLU HG3 H N N 65 GLU HE2 H N N 66 GLU HXT H N N 67 GLY N N N N 68 GLY CA C N N 69 GLY C C N N 70 GLY O O N N 71 GLY OXT O N N 72 GLY H H N N 73 GLY H2 H N N 74 GLY HA2 H N N 75 GLY HA3 H N N 76 GLY HXT H N N 77 HOH O O N N 78 HOH H1 H N N 79 HOH H2 H N N 80 ILE N N N N 81 ILE CA C N S 82 ILE C C N N 83 ILE O O N N 84 ILE CB C N S 85 ILE CG1 C N N 86 ILE CG2 C N N 87 ILE CD1 C N N 88 ILE OXT O N N 89 ILE H H N N 90 ILE H2 H N N 91 ILE HA H N N 92 ILE HB H N N 93 ILE HG12 H N N 94 ILE HG13 H N N 95 ILE HG21 H N N 96 ILE HG22 H N N 97 ILE HG23 H N N 98 ILE HD11 H N N 99 ILE HD12 H N N 100 ILE HD13 H N N 101 ILE HXT H N N 102 LEU N N N N 103 LEU CA C N S 104 LEU C C N N 105 LEU O O N N 106 LEU CB C N N 107 LEU CG C N N 108 LEU CD1 C N N 109 LEU CD2 C N N 110 LEU OXT O N N 111 LEU H H N N 112 LEU H2 H N N 113 LEU HA H N N 114 LEU HB2 H N N 115 LEU HB3 H N N 116 LEU HG H N N 117 LEU HD11 H N N 118 LEU HD12 H N N 119 LEU HD13 H N N 120 LEU HD21 H N N 121 LEU HD22 H N N 122 LEU HD23 H N N 123 LEU HXT H N N 124 LYS N N N N 125 LYS CA C N S 126 LYS C C N N 127 LYS O O N N 128 LYS CB C N N 129 LYS CG C N N 130 LYS CD C N N 131 LYS CE C N N 132 LYS NZ N N N 133 LYS OXT O N N 134 LYS H H N N 135 LYS H2 H N N 136 LYS HA H N N 137 LYS HB2 H N N 138 LYS HB3 H N N 139 LYS HG2 H N N 140 LYS HG3 H N N 141 LYS HD2 H N N 142 LYS HD3 H N N 143 LYS HE2 H N N 144 LYS HE3 H N N 145 LYS HZ1 H N N 146 LYS HZ2 H N N 147 LYS HZ3 H N N 148 LYS HXT H N N 149 TYR N N N N 150 TYR CA C N S 151 TYR C C N N 152 TYR O O N N 153 TYR CB C N N 154 TYR CG C Y N 155 TYR CD1 C Y N 156 TYR CD2 C Y N 157 TYR CE1 C Y N 158 TYR CE2 C Y N 159 TYR CZ C Y N 160 TYR OH O N N 161 TYR OXT O N N 162 TYR H H N N 163 TYR H2 H N N 164 TYR HA H N N 165 TYR HB2 H N N 166 TYR HB3 H N N 167 TYR HD1 H N N 168 TYR HD2 H N N 169 TYR HE1 H N N 170 TYR HE2 H N N 171 TYR HH H N N 172 TYR HXT H N N 173 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 CYS N CA sing N N 13 CYS N H sing N N 14 CYS N H2 sing N N 15 CYS CA C sing N N 16 CYS CA CB sing N N 17 CYS CA HA sing N N 18 CYS C O doub N N 19 CYS C OXT sing N N 20 CYS CB SG sing N N 21 CYS CB HB2 sing N N 22 CYS CB HB3 sing N N 23 CYS SG HG sing N N 24 CYS OXT HXT sing N N 25 GLN N CA sing N N 26 GLN N H sing N N 27 GLN N H2 sing N N 28 GLN CA C sing N N 29 GLN CA CB sing N N 30 GLN CA HA sing N N 31 GLN C O doub N N 32 GLN C OXT sing N N 33 GLN CB CG sing N N 34 GLN CB HB2 sing N N 35 GLN CB HB3 sing N N 36 GLN CG CD sing N N 37 GLN CG HG2 sing N N 38 GLN CG HG3 sing N N 39 GLN CD OE1 doub N N 40 GLN CD NE2 sing N N 41 GLN NE2 HE21 sing N N 42 GLN NE2 HE22 sing N N 43 GLN OXT HXT sing N N 44 GLU N CA sing N N 45 GLU N H sing N N 46 GLU N H2 sing N N 47 GLU CA C sing N N 48 GLU CA CB sing N N 49 GLU CA HA sing N N 50 GLU C O doub N N 51 GLU C OXT sing N N 52 GLU CB CG sing N N 53 GLU CB HB2 sing N N 54 GLU CB HB3 sing N N 55 GLU CG CD sing N N 56 GLU CG HG2 sing N N 57 GLU CG HG3 sing N N 58 GLU CD OE1 doub N N 59 GLU CD OE2 sing N N 60 GLU OE2 HE2 sing N N 61 GLU OXT HXT sing N N 62 GLY N CA sing N N 63 GLY N H sing N N 64 GLY N H2 sing N N 65 GLY CA C sing N N 66 GLY CA HA2 sing N N 67 GLY CA HA3 sing N N 68 GLY C O doub N N 69 GLY C OXT sing N N 70 GLY OXT HXT sing N N 71 HOH O H1 sing N N 72 HOH O H2 sing N N 73 ILE N CA sing N N 74 ILE N H sing N N 75 ILE N H2 sing N N 76 ILE CA C sing N N 77 ILE CA CB sing N N 78 ILE CA HA sing N N 79 ILE C O doub N N 80 ILE C OXT sing N N 81 ILE CB CG1 sing N N 82 ILE CB CG2 sing N N 83 ILE CB HB sing N N 84 ILE CG1 CD1 sing N N 85 ILE CG1 HG12 sing N N 86 ILE CG1 HG13 sing N N 87 ILE CG2 HG21 sing N N 88 ILE CG2 HG22 sing N N 89 ILE CG2 HG23 sing N N 90 ILE CD1 HD11 sing N N 91 ILE CD1 HD12 sing N N 92 ILE CD1 HD13 sing N N 93 ILE OXT HXT sing N N 94 LEU N CA sing N N 95 LEU N H sing N N 96 LEU N H2 sing N N 97 LEU CA C sing N N 98 LEU CA CB sing N N 99 LEU CA HA sing N N 100 LEU C O doub N N 101 LEU C OXT sing N N 102 LEU CB CG sing N N 103 LEU CB HB2 sing N N 104 LEU CB HB3 sing N N 105 LEU CG CD1 sing N N 106 LEU CG CD2 sing N N 107 LEU CG HG sing N N 108 LEU CD1 HD11 sing N N 109 LEU CD1 HD12 sing N N 110 LEU CD1 HD13 sing N N 111 LEU CD2 HD21 sing N N 112 LEU CD2 HD22 sing N N 113 LEU CD2 HD23 sing N N 114 LEU OXT HXT sing N N 115 LYS N CA sing N N 116 LYS N H sing N N 117 LYS N H2 sing N N 118 LYS CA C sing N N 119 LYS CA CB sing N N 120 LYS CA HA sing N N 121 LYS C O doub N N 122 LYS C OXT sing N N 123 LYS CB CG sing N N 124 LYS CB HB2 sing N N 125 LYS CB HB3 sing N N 126 LYS CG CD sing N N 127 LYS CG HG2 sing N N 128 LYS CG HG3 sing N N 129 LYS CD CE sing N N 130 LYS CD HD2 sing N N 131 LYS CD HD3 sing N N 132 LYS CE NZ sing N N 133 LYS CE HE2 sing N N 134 LYS CE HE3 sing N N 135 LYS NZ HZ1 sing N N 136 LYS NZ HZ2 sing N N 137 LYS NZ HZ3 sing N N 138 LYS OXT HXT sing N N 139 TYR N CA sing N N 140 TYR N H sing N N 141 TYR N H2 sing N N 142 TYR CA C sing N N 143 TYR CA CB sing N N 144 TYR CA HA sing N N 145 TYR C O doub N N 146 TYR C OXT sing N N 147 TYR CB CG sing N N 148 TYR CB HB2 sing N N 149 TYR CB HB3 sing N N 150 TYR CG CD1 doub Y N 151 TYR CG CD2 sing Y N 152 TYR CD1 CE1 sing Y N 153 TYR CD1 HD1 sing N N 154 TYR CD2 CE2 doub Y N 155 TYR CD2 HD2 sing N N 156 TYR CE1 CZ doub Y N 157 TYR CE1 HE1 sing N N 158 TYR CE2 CZ sing Y N 159 TYR CE2 HE2 sing N N 160 TYR CZ OH sing N N 161 TYR OH HH sing N N 162 TYR OXT HXT sing N N 163 # _atom_sites.entry_id 4G1A _atom_sites.fract_transf_matrix[1][1] 0.032508 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004272 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028406 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015729 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CD N O S # loop_