HEADER CELL INVASION 10-JUL-12 4G1I TITLE STRUCTURE OF THE PRGH PERIPLASMIC DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN PRGH; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 170-392; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM; SOURCE 4 ORGANISM_COMMON: SALMONELLA TYPHIMURIUM; SOURCE 5 ORGANISM_TAXID: 90371; SOURCE 6 GENE: PRGH, STM2874; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS RING-BUILDING MOTIF, TYPE III SECRETION, INVG, CELL INVASION EXPDTA X-RAY DIFFRACTION AUTHOR J.R.C.BERGERON,L.J.WORRALL,N.C.J.STRYNADKA REVDAT 4 13-SEP-23 4G1I 1 REMARK SEQADV REVDAT 3 15-NOV-17 4G1I 1 REMARK REVDAT 2 22-MAY-13 4G1I 1 JRNL REVDAT 1 08-MAY-13 4G1I 0 JRNL AUTH J.R.BERGERON,L.J.WORRALL,N.G.SGOURAKIS,F.DIMAIO, JRNL AUTH 2 R.A.PFUETZNER,H.B.FELISE,M.VUCKOVIC,A.C.YU,S.I.MILLER, JRNL AUTH 3 D.BAKER,N.C.STRYNADKA JRNL TITL A REFINED MODEL OF THE PROTOTYPICAL SALMONELLA SPI-1 T3SS JRNL TITL 2 BASAL BODY REVEALS THE MOLECULAR BASIS FOR ITS ASSEMBLY. JRNL REF PLOS PATHOG. V. 9 03307 2013 JRNL REFN ISSN 1553-7366 JRNL PMID 23633951 JRNL DOI 10.1371/JOURNAL.PPAT.1003307 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 36630 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1835 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9714 - 4.3488 0.96 2735 150 0.1898 0.2124 REMARK 3 2 4.3488 - 3.4522 0.99 2682 161 0.1514 0.1952 REMARK 3 3 3.4522 - 3.0159 0.99 2688 132 0.1669 0.2066 REMARK 3 4 3.0159 - 2.7402 0.99 2688 144 0.1659 0.2055 REMARK 3 5 2.7402 - 2.5438 1.00 2667 147 0.1724 0.2186 REMARK 3 6 2.5438 - 2.3938 1.00 2691 133 0.1614 0.1967 REMARK 3 7 2.3938 - 2.2739 1.00 2683 135 0.1750 0.2357 REMARK 3 8 2.2739 - 2.1750 1.00 2658 140 0.1694 0.2386 REMARK 3 9 2.1750 - 2.0912 1.00 2649 139 0.1799 0.1970 REMARK 3 10 2.0912 - 2.0191 1.00 2670 140 0.1836 0.2462 REMARK 3 11 2.0191 - 1.9559 1.00 2640 140 0.1971 0.2549 REMARK 3 12 1.9559 - 1.9000 1.00 2688 144 0.2081 0.2653 REMARK 3 13 1.9000 - 1.8500 1.00 2656 130 0.2385 0.3163 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.76820 REMARK 3 B22 (A**2) : -7.96000 REMARK 3 B33 (A**2) : 6.19180 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -5.67610 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 3320 REMARK 3 ANGLE : 1.545 4464 REMARK 3 CHIRALITY : 0.118 463 REMARK 3 PLANARITY : 0.007 572 REMARK 3 DIHEDRAL : 18.006 1281 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 173:184) REMARK 3 ORIGIN FOR THE GROUP (A): -43.6965 -0.6902 31.7675 REMARK 3 T TENSOR REMARK 3 T11: 0.5711 T22: 0.4950 REMARK 3 T33: 0.3177 T12: 0.1430 REMARK 3 T13: -0.0272 T23: 0.0470 REMARK 3 L TENSOR REMARK 3 L11: 0.0146 L22: -0.0008 REMARK 3 L33: 0.0083 L12: 0.0188 REMARK 3 L13: 0.0511 L23: 0.0100 REMARK 3 S TENSOR REMARK 3 S11: -0.3658 S12: -0.2153 S13: 0.4376 REMARK 3 S21: 0.5110 S22: 0.4448 S23: 0.3517 REMARK 3 S31: -0.0042 S32: 0.3471 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 185:201) REMARK 3 ORIGIN FOR THE GROUP (A): -49.9071 -1.3272 23.1334 REMARK 3 T TENSOR REMARK 3 T11: 0.5185 T22: 0.3189 REMARK 3 T33: 0.2660 T12: -0.0430 REMARK 3 T13: -0.0575 T23: 0.0727 REMARK 3 L TENSOR REMARK 3 L11: 0.0446 L22: 0.1058 REMARK 3 L33: 0.0665 L12: -0.0890 REMARK 3 L13: 0.0477 L23: 0.0038 REMARK 3 S TENSOR REMARK 3 S11: 0.1137 S12: -0.2301 S13: -0.1069 REMARK 3 S21: 0.1997 S22: 0.1010 S23: -0.3091 REMARK 3 S31: 0.5127 S32: -0.0046 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 202:214) REMARK 3 ORIGIN FOR THE GROUP (A): -36.8297 -3.6560 23.2645 REMARK 3 T TENSOR REMARK 3 T11: 0.5804 T22: 0.3485 REMARK 3 T33: 0.3654 T12: 0.1192 REMARK 3 T13: -0.1864 T23: -0.0523 REMARK 3 L TENSOR REMARK 3 L11: -0.0106 L22: 0.0024 REMARK 3 L33: 0.0495 L12: 0.0582 REMARK 3 L13: 0.0014 L23: -0.0076 REMARK 3 S TENSOR REMARK 3 S11: -0.1061 S12: -0.1380 S13: 0.1918 REMARK 3 S21: 0.1369 S22: 0.0958 S23: -0.2818 REMARK 3 S31: 0.1743 S32: 0.3169 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 215:221) REMARK 3 ORIGIN FOR THE GROUP (A): -45.5288 -11.3432 25.1230 REMARK 3 T TENSOR REMARK 3 T11: 0.6038 T22: 0.2562 REMARK 3 T33: 0.3545 T12: 0.0114 REMARK 3 T13: -0.0132 T23: 0.0458 REMARK 3 L TENSOR REMARK 3 L11: -0.0185 L22: -0.0138 REMARK 3 L33: -0.0149 L12: 0.0353 REMARK 3 L13: 0.0039 L23: -0.0338 REMARK 3 S TENSOR REMARK 3 S11: -0.2398 S12: 0.0656 S13: -0.1549 REMARK 3 S21: -0.2839 S22: -0.2283 S23: 0.4880 REMARK 3 S31: -0.0362 S32: 0.3313 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 222:266) REMARK 3 ORIGIN FOR THE GROUP (A): -54.4520 7.2484 8.7686 REMARK 3 T TENSOR REMARK 3 T11: 0.1545 T22: 0.1012 REMARK 3 T33: 0.1148 T12: -0.0036 REMARK 3 T13: -0.0076 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 0.5352 L22: 0.9221 REMARK 3 L33: -0.2538 L12: 0.7077 REMARK 3 L13: -0.1485 L23: 0.0646 REMARK 3 S TENSOR REMARK 3 S11: 0.0438 S12: -0.0032 S13: -0.0367 REMARK 3 S21: 0.0616 S22: -0.0753 S23: 0.0463 REMARK 3 S31: 0.0483 S32: 0.0447 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 267:278) REMARK 3 ORIGIN FOR THE GROUP (A): -67.8887 6.5540 7.9584 REMARK 3 T TENSOR REMARK 3 T11: 0.2008 T22: 0.2286 REMARK 3 T33: 0.2630 T12: -0.0122 REMARK 3 T13: 0.0298 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: -0.0110 L22: 0.0224 REMARK 3 L33: -0.0004 L12: 0.0023 REMARK 3 L13: 0.0121 L23: -0.0606 REMARK 3 S TENSOR REMARK 3 S11: 0.0384 S12: -0.0791 S13: -0.1291 REMARK 3 S21: 0.2594 S22: -0.0358 S23: 0.3742 REMARK 3 S31: -0.1050 S32: -0.0890 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 279:308) REMARK 3 ORIGIN FOR THE GROUP (A): -54.6837 14.2897 10.2586 REMARK 3 T TENSOR REMARK 3 T11: 0.1551 T22: 0.1535 REMARK 3 T33: 0.1375 T12: -0.0119 REMARK 3 T13: -0.0113 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.3584 L22: 0.4182 REMARK 3 L33: 0.0225 L12: -0.3818 REMARK 3 L13: -0.0344 L23: 0.2846 REMARK 3 S TENSOR REMARK 3 S11: 0.0074 S12: -0.0649 S13: 0.1583 REMARK 3 S21: 0.0779 S22: 0.0408 S23: 0.1535 REMARK 3 S31: 0.0093 S32: -0.0457 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 309:331) REMARK 3 ORIGIN FOR THE GROUP (A): -41.2271 23.5738 -4.6858 REMARK 3 T TENSOR REMARK 3 T11: 0.2578 T22: 0.2848 REMARK 3 T33: 0.2701 T12: 0.0204 REMARK 3 T13: 0.0892 T23: 0.0631 REMARK 3 L TENSOR REMARK 3 L11: 0.1370 L22: 0.1192 REMARK 3 L33: 0.3718 L12: -0.0485 REMARK 3 L13: -0.1787 L23: -0.0988 REMARK 3 S TENSOR REMARK 3 S11: 0.2037 S12: 0.0785 S13: 0.3154 REMARK 3 S21: -0.2543 S22: -0.2516 S23: -0.2038 REMARK 3 S31: 0.0931 S32: -0.0441 S33: -0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 332:363) REMARK 3 ORIGIN FOR THE GROUP (A): -37.5902 18.7425 1.8680 REMARK 3 T TENSOR REMARK 3 T11: 0.1416 T22: 0.1788 REMARK 3 T33: 0.1281 T12: -0.0013 REMARK 3 T13: 0.0098 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.1352 L22: 0.4043 REMARK 3 L33: 0.2211 L12: 0.1147 REMARK 3 L13: -0.2334 L23: -0.0035 REMARK 3 S TENSOR REMARK 3 S11: -0.0198 S12: -0.0741 S13: -0.0618 REMARK 3 S21: -0.0474 S22: 0.0618 S23: 0.0051 REMARK 3 S31: 0.0905 S32: 0.0957 S33: -0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 183:217) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5359 38.8532 37.5422 REMARK 3 T TENSOR REMARK 3 T11: 0.2732 T22: 0.4055 REMARK 3 T33: 0.3874 T12: 0.0447 REMARK 3 T13: -0.0864 T23: -0.0841 REMARK 3 L TENSOR REMARK 3 L11: 0.4464 L22: 0.0580 REMARK 3 L33: 0.1712 L12: -0.0853 REMARK 3 L13: 0.2338 L23: -0.0046 REMARK 3 S TENSOR REMARK 3 S11: -0.0639 S12: -0.1802 S13: 0.2625 REMARK 3 S21: 0.0460 S22: 0.0797 S23: -0.2508 REMARK 3 S31: 0.0737 S32: -0.1680 S33: -0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 218:294) REMARK 3 ORIGIN FOR THE GROUP (A): -17.0552 29.8555 22.0881 REMARK 3 T TENSOR REMARK 3 T11: 0.1267 T22: 0.1793 REMARK 3 T33: 0.2137 T12: -0.0091 REMARK 3 T13: -0.0050 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 1.0178 L22: 0.3225 REMARK 3 L33: 0.2433 L12: 0.6832 REMARK 3 L13: -0.3624 L23: -0.4546 REMARK 3 S TENSOR REMARK 3 S11: -0.0987 S12: 0.0748 S13: 0.0595 REMARK 3 S21: 0.0731 S22: 0.0117 S23: -0.0742 REMARK 3 S31: 0.0015 S32: -0.0133 S33: 0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 295:356) REMARK 3 ORIGIN FOR THE GROUP (A): -27.8449 13.1358 35.7373 REMARK 3 T TENSOR REMARK 3 T11: 0.2244 T22: 0.1825 REMARK 3 T33: 0.1671 T12: 0.0168 REMARK 3 T13: -0.0022 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.7532 L22: 0.2776 REMARK 3 L33: 0.6594 L12: 0.3092 REMARK 3 L13: -0.2490 L23: -0.0753 REMARK 3 S TENSOR REMARK 3 S11: 0.0678 S12: -0.0296 S13: -0.0242 REMARK 3 S21: 0.0626 S22: 0.0574 S23: -0.1010 REMARK 3 S31: 0.0649 S32: 0.0240 S33: 0.0000 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 357:367) REMARK 3 ORIGIN FOR THE GROUP (A): -38.5416 10.0416 47.7402 REMARK 3 T TENSOR REMARK 3 T11: 0.2393 T22: 0.2217 REMARK 3 T33: 0.2800 T12: 0.0020 REMARK 3 T13: 0.0723 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 0.0330 L22: -0.0259 REMARK 3 L33: 0.0169 L12: 0.1250 REMARK 3 L13: 0.0512 L23: 0.0806 REMARK 3 S TENSOR REMARK 3 S11: -0.0206 S12: 0.3640 S13: -0.7076 REMARK 3 S21: 0.2255 S22: -0.1418 S23: -0.1806 REMARK 3 S31: -0.3558 S32: -0.4870 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4G1I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000073619. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43189 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3GR0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BICINE, PH 8.5, 20% PEG6000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 132.21600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 16.69000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 132.21600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 16.69000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THOUGH THE CLONED PROTEIN CONSTRUCT THAT WAS CRYSTALLIZED REMARK 300 IS A MONOMER, THE FULL-LENGTH VERSION OF THIS PROTEIN FORMS A 24- REMARK 300 MER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 166 REMARK 465 SER A 167 REMARK 465 HIS A 168 REMARK 465 MET A 169 REMARK 465 ALA A 170 REMARK 465 ALA A 171 REMARK 465 GLU A 180 REMARK 465 LYS A 181 REMARK 465 GLU A 182 REMARK 465 ASP A 364 REMARK 465 TRP A 365 REMARK 465 LEU A 366 REMARK 465 LYS A 367 REMARK 465 GLY A 368 REMARK 465 ARG A 369 REMARK 465 SER A 370 REMARK 465 PHE A 371 REMARK 465 GLN A 372 REMARK 465 TYR A 373 REMARK 465 GLY A 374 REMARK 465 ALA A 375 REMARK 465 GLU A 376 REMARK 465 GLY A 377 REMARK 465 TYR A 378 REMARK 465 ILE A 379 REMARK 465 LYS A 380 REMARK 465 MET A 381 REMARK 465 SER A 382 REMARK 465 PRO A 383 REMARK 465 GLY A 384 REMARK 465 HIS A 385 REMARK 465 TRP A 386 REMARK 465 TYR A 387 REMARK 465 PHE A 388 REMARK 465 PRO A 389 REMARK 465 SER A 390 REMARK 465 PRO A 391 REMARK 465 LEU A 392 REMARK 465 GLY B 166 REMARK 465 SER B 167 REMARK 465 HIS B 168 REMARK 465 MET B 169 REMARK 465 ALA B 170 REMARK 465 ALA B 171 REMARK 465 GLU B 180 REMARK 465 LYS B 181 REMARK 465 SER B 370 REMARK 465 PHE B 371 REMARK 465 GLN B 372 REMARK 465 TYR B 373 REMARK 465 GLY B 374 REMARK 465 ALA B 375 REMARK 465 GLU B 376 REMARK 465 GLY B 377 REMARK 465 TYR B 378 REMARK 465 ILE B 379 REMARK 465 LYS B 380 REMARK 465 MET B 381 REMARK 465 SER B 382 REMARK 465 PRO B 383 REMARK 465 GLY B 384 REMARK 465 HIS B 385 REMARK 465 TRP B 386 REMARK 465 TYR B 387 REMARK 465 PHE B 388 REMARK 465 PRO B 389 REMARK 465 SER B 390 REMARK 465 PRO B 391 REMARK 465 LEU B 392 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 179 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 344 O HOH A 586 2.03 REMARK 500 O ASP A 363 O HOH A 618 2.03 REMARK 500 O HOH A 609 O HOH A 613 2.08 REMARK 500 O HOH A 593 O HOH A 597 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 217 -13.44 -49.23 REMARK 500 LYS A 218 16.94 -141.03 REMARK 500 TYR A 246 -72.22 -107.15 REMARK 500 TYR A 354 -80.63 -124.52 REMARK 500 ASP B 215 72.53 23.58 REMARK 500 TYR B 246 -70.57 -111.68 REMARK 500 TYR B 354 -72.81 -127.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 401 REMARK 610 1PE A 402 REMARK 610 1PE B 401 REMARK 610 1PE B 402 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GR0 RELATED DB: PDB REMARK 900 ALTERNATIVE CRYSTAL FORM REMARK 900 RELATED ID: 3GR1 RELATED DB: PDB REMARK 900 ALTERNATIVE CRYSTAL FORM REMARK 900 RELATED ID: 4G08 RELATED DB: PDB REMARK 900 RELATED ID: 4G2S RELATED DB: PDB DBREF 4G1I A 170 392 UNP P41783 PRGH_SALTY 170 392 DBREF 4G1I B 170 392 UNP P41783 PRGH_SALTY 170 392 SEQADV 4G1I GLY A 166 UNP P41783 EXPRESSION TAG SEQADV 4G1I SER A 167 UNP P41783 EXPRESSION TAG SEQADV 4G1I HIS A 168 UNP P41783 EXPRESSION TAG SEQADV 4G1I MET A 169 UNP P41783 EXPRESSION TAG SEQADV 4G1I GLY B 166 UNP P41783 EXPRESSION TAG SEQADV 4G1I SER B 167 UNP P41783 EXPRESSION TAG SEQADV 4G1I HIS B 168 UNP P41783 EXPRESSION TAG SEQADV 4G1I MET B 169 UNP P41783 EXPRESSION TAG SEQRES 1 A 227 GLY SER HIS MET ALA ALA GLU LEU ASP SER LEU LEU GLY SEQRES 2 A 227 GLN GLU LYS GLU ARG PHE GLN VAL LEU PRO GLY ARG ASP SEQRES 3 A 227 LYS MET LEU TYR VAL ALA ALA GLN ASN GLU ARG ASP THR SEQRES 4 A 227 LEU TRP ALA ARG GLN VAL LEU ALA ARG GLY ASP TYR ASP SEQRES 5 A 227 LYS ASN ALA ARG VAL ILE ASN GLU ASN GLU GLU ASN LYS SEQRES 6 A 227 ARG ILE SER ILE TRP LEU ASP THR TYR TYR PRO GLN LEU SEQRES 7 A 227 ALA TYR TYR ARG ILE HIS PHE ASP GLU PRO ARG LYS PRO SEQRES 8 A 227 VAL PHE TRP LEU SER ARG GLN ARG ASN THR MET SER LYS SEQRES 9 A 227 LYS GLU LEU GLU VAL LEU SER GLN LYS LEU ARG ALA LEU SEQRES 10 A 227 MET PRO TYR ALA ASP SER VAL ASN ILE THR LEU MET ASP SEQRES 11 A 227 ASP VAL THR ALA ALA GLY GLN ALA GLU ALA GLY LEU LYS SEQRES 12 A 227 GLN GLN ALA LEU PRO TYR SER ARG ARG ASN HIS LYS GLY SEQRES 13 A 227 GLY VAL THR PHE VAL ILE GLN GLY ALA LEU ASP ASP VAL SEQRES 14 A 227 GLU ILE LEU ARG ALA ARG GLN PHE VAL ASP SER TYR TYR SEQRES 15 A 227 ARG THR TRP GLY GLY ARG TYR VAL GLN PHE ALA ILE GLU SEQRES 16 A 227 LEU LYS ASP ASP TRP LEU LYS GLY ARG SER PHE GLN TYR SEQRES 17 A 227 GLY ALA GLU GLY TYR ILE LYS MET SER PRO GLY HIS TRP SEQRES 18 A 227 TYR PHE PRO SER PRO LEU SEQRES 1 B 227 GLY SER HIS MET ALA ALA GLU LEU ASP SER LEU LEU GLY SEQRES 2 B 227 GLN GLU LYS GLU ARG PHE GLN VAL LEU PRO GLY ARG ASP SEQRES 3 B 227 LYS MET LEU TYR VAL ALA ALA GLN ASN GLU ARG ASP THR SEQRES 4 B 227 LEU TRP ALA ARG GLN VAL LEU ALA ARG GLY ASP TYR ASP SEQRES 5 B 227 LYS ASN ALA ARG VAL ILE ASN GLU ASN GLU GLU ASN LYS SEQRES 6 B 227 ARG ILE SER ILE TRP LEU ASP THR TYR TYR PRO GLN LEU SEQRES 7 B 227 ALA TYR TYR ARG ILE HIS PHE ASP GLU PRO ARG LYS PRO SEQRES 8 B 227 VAL PHE TRP LEU SER ARG GLN ARG ASN THR MET SER LYS SEQRES 9 B 227 LYS GLU LEU GLU VAL LEU SER GLN LYS LEU ARG ALA LEU SEQRES 10 B 227 MET PRO TYR ALA ASP SER VAL ASN ILE THR LEU MET ASP SEQRES 11 B 227 ASP VAL THR ALA ALA GLY GLN ALA GLU ALA GLY LEU LYS SEQRES 12 B 227 GLN GLN ALA LEU PRO TYR SER ARG ARG ASN HIS LYS GLY SEQRES 13 B 227 GLY VAL THR PHE VAL ILE GLN GLY ALA LEU ASP ASP VAL SEQRES 14 B 227 GLU ILE LEU ARG ALA ARG GLN PHE VAL ASP SER TYR TYR SEQRES 15 B 227 ARG THR TRP GLY GLY ARG TYR VAL GLN PHE ALA ILE GLU SEQRES 16 B 227 LEU LYS ASP ASP TRP LEU LYS GLY ARG SER PHE GLN TYR SEQRES 17 B 227 GLY ALA GLU GLY TYR ILE LYS MET SER PRO GLY HIS TRP SEQRES 18 B 227 TYR PHE PRO SER PRO LEU HET 1PE A 401 14 HET 1PE A 402 14 HET PO4 A 403 5 HET PO4 A 404 5 HET 1PE B 401 14 HET 1PE B 402 14 HET PO4 B 403 5 HET PO4 B 404 5 HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM PO4 PHOSPHATE ION HETSYN 1PE PEG400 FORMUL 3 1PE 4(C10 H22 O6) FORMUL 5 PO4 4(O4 P 3-) FORMUL 11 HOH *233(H2 O) HELIX 1 1 GLU A 172 GLN A 179 1 8 HELIX 2 2 ASN A 200 ARG A 213 1 14 HELIX 3 3 ASN A 224 TYR A 240 1 17 HELIX 4 4 SER A 268 MET A 283 1 16 HELIX 5 5 ASP A 295 GLN A 310 1 16 HELIX 6 6 ASP A 332 GLY A 351 1 20 HELIX 7 7 LEU B 173 GLN B 179 1 7 HELIX 8 8 ASN B 200 GLY B 214 1 15 HELIX 9 9 ASN B 224 TYR B 240 1 17 HELIX 10 10 SER B 268 MET B 283 1 16 HELIX 11 11 ASP B 295 GLN B 310 1 16 HELIX 12 12 ASP B 332 GLY B 351 1 20 SHEET 1 A 3 PHE A 184 PRO A 188 0 SHEET 2 A 3 LEU A 194 ALA A 198 -1 O TYR A 195 N LEU A 187 SHEET 3 A 3 ALA A 220 ILE A 223 1 O ILE A 223 N VAL A 196 SHEET 1 B 3 TYR A 245 HIS A 249 0 SHEET 2 B 3 VAL A 257 SER A 261 -1 O VAL A 257 N HIS A 249 SHEET 3 B 3 ASN A 290 MET A 294 1 O MET A 294 N LEU A 260 SHEET 1 C 3 TYR A 314 HIS A 319 0 SHEET 2 C 3 GLY A 322 GLY A 329 -1 O VAL A 326 N SER A 315 SHEET 3 C 3 VAL A 355 LEU A 361 1 O GLU A 360 N ILE A 327 SHEET 1 D 3 GLN B 185 PRO B 188 0 SHEET 2 D 3 LEU B 194 ALA B 197 -1 O TYR B 195 N LEU B 187 SHEET 3 D 3 ALA B 220 ILE B 223 1 O ARG B 221 N VAL B 196 SHEET 1 E 3 TYR B 245 HIS B 249 0 SHEET 2 E 3 VAL B 257 SER B 261 -1 O VAL B 257 N HIS B 249 SHEET 3 E 3 ASN B 290 MET B 294 1 O MET B 294 N LEU B 260 SHEET 1 F 3 TYR B 314 ASN B 318 0 SHEET 2 F 3 VAL B 323 ILE B 327 -1 O VAL B 326 N SER B 315 SHEET 3 F 3 VAL B 355 ILE B 359 1 O ALA B 358 N ILE B 327 SITE 1 AC1 8 TYR A 239 TYR A 240 GLN A 263 ASN A 265 SITE 2 AC1 8 THR A 266 VAL A 274 LYS A 278 HOH A 614 SITE 1 AC2 8 GLU A 227 ARG A 231 LEU A 282 THR A 298 SITE 2 AC2 8 GLY A 301 ALA A 305 HOH A 505 TRP B 365 SITE 1 AC3 4 THR A 298 GLN A 302 TRP A 350 HOH A 630 SITE 1 AC4 5 MET A 294 ASP A 295 THR A 298 HOH A 571 SITE 2 AC4 5 HOH A 630 SITE 1 AC5 3 TYR B 239 LYS B 278 ALA B 281 SITE 1 AC6 7 ARG B 221 ARG B 231 LEU B 282 THR B 298 SITE 2 AC6 7 GLY B 301 GLN B 302 HOH B 584 SITE 1 AC7 7 GLY A 329 ALA A 330 LEU A 331 LYS A 362 SITE 2 AC7 7 ARG B 340 VAL B 343 ASP B 344 SITE 1 AC8 4 ALA A 358 HOH A 581 ARG B 317 HOH B 569 CRYST1 264.432 33.380 48.530 90.00 91.60 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003788 0.000000 0.000112 0.00000 SCALE2 0.000000 0.029985 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020628 0.00000