HEADER PROTEIN BINDING 13-JUL-12 4G2V TITLE STRUCTURE COMPLEX OF LGN BINDING WITH FRMPD1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: G-PROTEIN-SIGNALING MODULATOR 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TPR DOMAIN, UNP RESIDUES 22-357; COMPND 5 SYNONYM: PINS HOMOLOG; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEPTIDE FROM FERM AND PDZ DOMAIN-CONTAINING PROTEIN 1; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: UNP RESIDUES 901-938; COMPND 11 SYNONYM: FERM DOMAIN-CONTAINING PROTEIN 2; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 14 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TPR REPEAT, LGN, CELL POLARITY, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR Y.SHANG,Z.PAN,W.WEN,W.WANG,M.ZHANG REVDAT 3 20-MAR-24 4G2V 1 REMARK SEQADV REVDAT 2 17-JUL-13 4G2V 1 JRNL REVDAT 1 23-JAN-13 4G2V 0 JRNL AUTH Z.PAN,Y.SHANG,M.JIA,L.ZHANG,C.XIA,M.ZHANG,W.WANG,W.WEN JRNL TITL STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF THE JRNL TITL 2 INTERACTION BETWEEN LGN AND FRMPD1 JRNL REF J.MOL.BIOL. V. 425 1039 2013 JRNL REFN ISSN 0022-2836 JRNL PMID 23318951 JRNL DOI 10.1016/J.JMB.2013.01.003 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 18248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.2402 - 4.5899 1.00 2698 119 0.1990 0.2263 REMARK 3 2 4.5899 - 3.6439 1.00 2491 143 0.1738 0.2096 REMARK 3 3 3.6439 - 3.1835 1.00 2476 130 0.1833 0.2281 REMARK 3 4 3.1835 - 2.8925 1.00 2437 133 0.1910 0.2500 REMARK 3 5 2.8925 - 2.6852 1.00 2441 121 0.1951 0.2763 REMARK 3 6 2.6852 - 2.5269 1.00 2388 152 0.1977 0.2371 REMARK 3 7 2.5269 - 2.4004 1.00 2388 131 0.2050 0.2754 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.72 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 55.52 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.570 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.77530 REMARK 3 B22 (A**2) : 6.77530 REMARK 3 B33 (A**2) : -13.55060 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2683 REMARK 3 ANGLE : 0.712 3601 REMARK 3 CHIRALITY : 0.056 389 REMARK 3 PLANARITY : 0.003 469 REMARK 3 DIHEDRAL : 17.369 969 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 13:87) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6124 -33.2786 -14.5726 REMARK 3 T TENSOR REMARK 3 T11: 0.5717 T22: 0.4208 REMARK 3 T33: 0.2452 T12: -0.2300 REMARK 3 T13: -0.0323 T23: 0.0723 REMARK 3 L TENSOR REMARK 3 L11: 3.3373 L22: 4.0064 REMARK 3 L33: 2.0455 L12: 1.3692 REMARK 3 L13: -1.5131 L23: -1.1858 REMARK 3 S TENSOR REMARK 3 S11: -0.1546 S12: -0.1157 S13: -0.3773 REMARK 3 S21: 0.3002 S22: 0.1362 S23: 0.1920 REMARK 3 S31: 0.8008 S32: -0.6518 S33: 0.0474 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 88:164) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1418 -20.6593 -15.9253 REMARK 3 T TENSOR REMARK 3 T11: 0.3289 T22: 0.1281 REMARK 3 T33: 0.2160 T12: -0.0484 REMARK 3 T13: -0.0922 T23: 0.0593 REMARK 3 L TENSOR REMARK 3 L11: 6.9469 L22: 1.5363 REMARK 3 L33: 2.9191 L12: -1.4017 REMARK 3 L13: -0.2615 L23: 0.4497 REMARK 3 S TENSOR REMARK 3 S11: -0.1239 S12: 0.2213 S13: 0.4202 REMARK 3 S21: -0.0896 S22: 0.0027 S23: -0.0988 REMARK 3 S31: -0.1139 S32: -0.1236 S33: 0.1030 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 165:268) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4924 -30.8447 -6.0363 REMARK 3 T TENSOR REMARK 3 T11: 0.4145 T22: 0.1727 REMARK 3 T33: 0.2504 T12: 0.0853 REMARK 3 T13: -0.1520 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 2.8583 L22: 2.0668 REMARK 3 L33: 1.5117 L12: -0.4591 REMARK 3 L13: 0.0051 L23: 0.1156 REMARK 3 S TENSOR REMARK 3 S11: -0.1361 S12: -0.0657 S13: -0.2258 REMARK 3 S21: 0.3262 S22: 0.0699 S23: -0.2363 REMARK 3 S31: 0.3727 S32: 0.3086 S33: 0.1029 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 269:344) REMARK 3 ORIGIN FOR THE GROUP (A): 28.4777 -54.3777 -15.9361 REMARK 3 T TENSOR REMARK 3 T11: 1.1687 T22: 0.4814 REMARK 3 T33: 0.6185 T12: 0.3247 REMARK 3 T13: -0.0002 T23: -0.0339 REMARK 3 L TENSOR REMARK 3 L11: 1.5441 L22: 4.5499 REMARK 3 L33: 3.6714 L12: -1.5790 REMARK 3 L13: -0.0020 L23: 1.8095 REMARK 3 S TENSOR REMARK 3 S11: -0.0879 S12: 0.3519 S13: -0.0398 REMARK 3 S21: -0.2635 S22: -0.2539 S23: -0.2642 REMARK 3 S31: 1.5790 S32: 0.5347 S33: 0.1280 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 4:11) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7095 -33.5535 -11.4174 REMARK 3 T TENSOR REMARK 3 T11: 0.6953 T22: 0.3508 REMARK 3 T33: 0.4885 T12: 0.0425 REMARK 3 T13: -0.0403 T23: -0.0625 REMARK 3 L TENSOR REMARK 3 L11: 5.9209 L22: 5.5542 REMARK 3 L33: 4.2868 L12: -5.7312 REMARK 3 L13: -5.0377 L23: 4.8782 REMARK 3 S TENSOR REMARK 3 S11: 0.3225 S12: 0.9498 S13: -0.8834 REMARK 3 S21: -0.6764 S22: -0.2307 S23: 0.1440 REMARK 3 S31: 0.9940 S32: -0.1451 S33: -0.1887 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 12:16) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9158 -27.3240 -8.9575 REMARK 3 T TENSOR REMARK 3 T11: 0.3509 T22: 0.3550 REMARK 3 T33: 0.1027 T12: -0.0480 REMARK 3 T13: -0.0198 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 6.0460 L22: 7.2369 REMARK 3 L33: 5.2600 L12: 0.9815 REMARK 3 L13: -4.7777 L23: -3.1083 REMARK 3 S TENSOR REMARK 3 S11: 0.2445 S12: -0.9951 S13: -0.1944 REMARK 3 S21: 0.9063 S22: -0.2728 S23: -0.0827 REMARK 3 S31: -0.2768 S32: -0.4992 S33: 0.0155 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 17:19) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9801 -27.4310 -2.7707 REMARK 3 T TENSOR REMARK 3 T11: 1.0041 T22: 0.9915 REMARK 3 T33: 0.9617 T12: -0.3846 REMARK 3 T13: 0.3139 T23: 0.0679 REMARK 3 L TENSOR REMARK 3 L11: 5.1628 L22: 4.2746 REMARK 3 L33: 1.9520 L12: 4.6977 REMARK 3 L13: 3.1746 L23: 2.8886 REMARK 3 S TENSOR REMARK 3 S11: 0.9972 S12: -1.1346 S13: 0.8081 REMARK 3 S21: 3.1368 S22: -1.6358 S23: 1.3289 REMARK 3 S31: 2.3167 S32: -2.4014 S33: 0.6941 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4G2V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000073668. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18332 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.90 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM CHLORIDE, 0.1M BISTIS REMARK 280 PH6.5, 25% PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.62100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 115.24200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 86.43150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 144.05250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.81050 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 57.62100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 115.24200 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 144.05250 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 86.43150 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 28.81050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CD1 PHE A 152 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 552 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 11 REMARK 465 PRO A 12 REMARK 465 GLY A 153 REMARK 465 CYS A 154 REMARK 465 PRO A 155 REMARK 465 GLY A 156 REMARK 465 PRO A 157 REMARK 465 GLN A 158 REMARK 465 ASP A 159 REMARK 465 THR A 160 REMARK 465 GLY A 161 REMARK 465 GLU A 162 REMARK 465 PHE A 163 REMARK 465 SER A 345 REMARK 465 ARG A 346 REMARK 465 GLU A 347 REMARK 465 VAL A 348 REMARK 465 GLY A 349 REMARK 465 ASP A 350 REMARK 465 ALA B -15 REMARK 465 LEU B -14 REMARK 465 GLY B -13 REMARK 465 LEU B -12 REMARK 465 LEU B -11 REMARK 465 ALA B -10 REMARK 465 PRO B -9 REMARK 465 LEU B -8 REMARK 465 ARG B -7 REMARK 465 GLU B -6 REMARK 465 THR B -5 REMARK 465 LYS B -4 REMARK 465 SER B -3 REMARK 465 THR B -2 REMARK 465 ASN B -1 REMARK 465 PRO B 0 REMARK 465 ALA B 1 REMARK 465 SER B 2 REMARK 465 ARG B 3 REMARK 465 ARG B 21 REMARK 465 VAL B 22 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 252 CG CD OE1 OE2 REMARK 470 LEU A 262 CG CD1 CD2 REMARK 470 LYS A 269 CG CD CE NZ REMARK 470 GLN A 289 CG CD OE1 NE2 REMARK 470 GLU A 292 CG CD OE1 OE2 REMARK 470 LEU A 302 CG CD1 CD2 REMARK 470 ILE A 304 CG1 CG2 CD1 REMARK 470 LEU A 308 CG CD1 CD2 REMARK 470 LYS A 309 CG CD CE NZ REMARK 470 ARG A 311 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 316 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 331 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 340 CG CD CE NZ REMARK 470 LEU A 342 CG CD1 CD2 REMARK 470 ILE A 344 CG1 CG2 CD1 REMARK 470 VAL B 4 CG1 CG2 REMARK 470 SER B 20 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 179 O HOH A 567 2.10 REMARK 500 NH1 ARG A 120 O HOH A 573 2.13 REMARK 500 O TRP A 319 ND2 ASN A 323 2.19 REMARK 500 NH1 ARG A 271 OE2 GLU A 307 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD1 PHE A 152 CE1 PHE A 152 9554 1.40 REMARK 500 CG PHE A 152 CD1 PHE A 152 9554 1.41 REMARK 500 CG PHE A 152 CE1 PHE A 152 9554 1.70 REMARK 500 O HOH A 563 O HOH A 572 6555 2.12 REMARK 500 NZ LYS A 300 O SER B 20 8545 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 331 -120.80 61.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 PHE A 152 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTB A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 101 DBREF 4G2V A 15 350 UNP Q8VDU0 GPSM2_MOUSE 22 357 DBREF 4G2V B -15 22 UNP Q5SYB0 FRPD1_HUMAN 901 938 SEQADV 4G2V GLY A 11 UNP Q8VDU0 EXPRESSION TAG SEQADV 4G2V PRO A 12 UNP Q8VDU0 EXPRESSION TAG SEQADV 4G2V GLY A 13 UNP Q8VDU0 EXPRESSION TAG SEQADV 4G2V SER A 14 UNP Q8VDU0 EXPRESSION TAG SEQRES 1 A 340 GLY PRO GLY SER ALA SER CYS LEU GLU LEU ALA LEU GLU SEQRES 2 A 340 GLY GLU ARG LEU CYS LYS SER GLY ASP CYS ARG ALA GLY SEQRES 3 A 340 VAL SER PHE PHE GLU ALA ALA VAL GLN VAL GLY THR GLU SEQRES 4 A 340 ASP LEU LYS THR LEU SER ALA ILE TYR SER GLN LEU GLY SEQRES 5 A 340 ASN ALA TYR PHE TYR LEU HIS ASP TYR ALA LYS ALA LEU SEQRES 6 A 340 GLU TYR HIS HIS HIS ASP LEU THR LEU ALA ARG THR ILE SEQRES 7 A 340 GLY ASP GLN LEU GLY GLU ALA LYS ALA SER GLY ASN LEU SEQRES 8 A 340 GLY ASN THR LEU LYS VAL LEU GLY ASN PHE ASP GLU ALA SEQRES 9 A 340 ILE VAL CYS CYS GLN ARG HIS LEU ASP ILE SER ARG GLU SEQRES 10 A 340 LEU ASN ASP LYS VAL GLY GLU ALA ARG ALA LEU TYR ASN SEQRES 11 A 340 LEU GLY ASN VAL TYR HIS ALA LYS GLY LYS SER PHE GLY SEQRES 12 A 340 CYS PRO GLY PRO GLN ASP THR GLY GLU PHE PRO GLU ASP SEQRES 13 A 340 VAL ARG ASN ALA LEU GLN ALA ALA VAL ASP LEU TYR GLU SEQRES 14 A 340 GLU ASN LEU SER LEU VAL THR ALA LEU GLY ASP ARG ALA SEQRES 15 A 340 ALA GLN GLY ARG ALA PHE GLY ASN LEU GLY ASN THR HIS SEQRES 16 A 340 TYR LEU LEU GLY ASN PHE ARG ASP ALA VAL ILE ALA HIS SEQRES 17 A 340 GLU GLN ARG LEU LEU ILE ALA LYS GLU PHE GLY ASP LYS SEQRES 18 A 340 ALA ALA GLU ARG ARG ALA TYR SER ASN LEU GLY ASN ALA SEQRES 19 A 340 TYR ILE PHE LEU GLY GLU PHE GLU THR ALA SER GLU TYR SEQRES 20 A 340 TYR LYS LYS THR LEU LEU LEU ALA ARG GLN LEU LYS ASP SEQRES 21 A 340 ARG ALA VAL GLU ALA GLN SER CYS TYR SER LEU GLY ASN SEQRES 22 A 340 THR TYR THR LEU LEU GLN ASP TYR GLU LYS ALA ILE ASP SEQRES 23 A 340 TYR HIS LEU LYS HIS LEU ALA ILE ALA GLN GLU LEU LYS SEQRES 24 A 340 ASP ARG ILE GLY GLU GLY ARG ALA CYS TRP SER LEU GLY SEQRES 25 A 340 ASN ALA TYR THR ALA LEU GLY ASN HIS ASP GLN ALA MET SEQRES 26 A 340 HIS PHE ALA GLU LYS HIS LEU GLU ILE SER ARG GLU VAL SEQRES 27 A 340 GLY ASP SEQRES 1 B 38 ALA LEU GLY LEU LEU ALA PRO LEU ARG GLU THR LYS SER SEQRES 2 B 38 THR ASN PRO ALA SER ARG VAL MET GLU MET GLU PRO GLU SEQRES 3 B 38 THR MET GLU THR LYS SER VAL ILE ASP SER ARG VAL HET GOL A 401 6 HET GOL A 402 6 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET GOL A 406 6 HET GOL A 407 6 HET BTB A 408 14 HET CL A 409 1 HET GOL B 101 6 HETNAM GOL GLYCEROL HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN BTB BIS-TRIS BUFFER FORMUL 3 GOL 8(C3 H8 O3) FORMUL 10 BTB C8 H19 N O5 FORMUL 11 CL CL 1- FORMUL 13 HOH *84(H2 O) HELIX 1 1 GLY A 13 SER A 30 1 18 HELIX 2 2 ASP A 32 GLY A 47 1 16 HELIX 3 3 ASP A 50 LEU A 68 1 19 HELIX 4 4 ASP A 70 ILE A 88 1 19 HELIX 5 5 ASP A 90 GLY A 109 1 20 HELIX 6 6 ASN A 110 LEU A 128 1 19 HELIX 7 7 ASP A 130 PHE A 152 1 23 HELIX 8 8 GLU A 165 GLY A 189 1 25 HELIX 9 9 ASP A 190 GLY A 209 1 20 HELIX 10 10 ASN A 210 GLY A 229 1 20 HELIX 11 11 ASP A 230 LEU A 248 1 19 HELIX 12 12 GLU A 250 LEU A 268 1 19 HELIX 13 13 ASP A 270 LEU A 288 1 19 HELIX 14 14 ASP A 290 LEU A 308 1 19 HELIX 15 15 ASP A 310 LEU A 328 1 19 HELIX 16 16 HIS A 331 ILE A 344 1 14 SITE 1 AC1 4 GLN A 119 LEU A 122 ARG A 126 GLU A 180 SITE 1 AC2 7 LEU A 92 ASP A 130 VAL A 132 GLY A 133 SITE 2 AC2 7 ARG A 136 GLU B 13 GOL B 101 SITE 1 AC3 12 VAL A 132 ALA A 135 ARG A 136 ASN A 181 SITE 2 AC3 12 VAL A 185 ASP A 190 ALA A 193 ARG A 196 SITE 3 AC3 12 GOL A 404 HOH A 514 HOH A 515 HOH A 525 SITE 1 AC4 5 ASP A 190 ALA A 192 ALA A 193 ARG A 196 SITE 2 AC4 5 GOL A 403 SITE 1 AC5 4 LYS A 106 ASN A 143 LYS A 150 GLU B 8 SITE 1 AC6 4 ARG A 221 PHE A 228 ASP A 230 HOH A 524 SITE 1 AC7 6 LYS A 73 GLU A 76 TYR A 77 GLU A 219 SITE 2 AC7 6 GLN A 220 HOH A 542 SITE 1 AC8 10 LEU A 75 GLU A 76 HIS A 79 GLU A 179 SITE 2 AC8 10 PHE A 198 LEU A 201 ILE A 216 HOH A 502 SITE 3 AC8 10 HOH A 534 HOH A 572 SITE 1 AC9 2 ARG A 120 HOH A 551 SITE 1 BC1 5 LYS A 96 VAL A 132 GOL A 402 GLU B 13 SITE 2 BC1 5 THR B 14 CRYST1 93.835 93.835 172.863 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010657 0.006153 0.000000 0.00000 SCALE2 0.000000 0.012306 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005785 0.00000