data_4G6X # _entry.id 4G6X # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4G6X RCSB RCSB073814 WWPDB D_1000073814 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type TargetTrack apc103202 . unspecified TargetTrack MCSG-APC103202 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4G6X _pdbx_database_status.recvd_initial_deposition_date 2012-07-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Filippova, E.V.' 1 'Minasov, G.' 2 'Shuvalova, L.' 3 'Kiryukhina, O.' 4 'Jedrzejczak, R.' 5 'Joachimiak, A.' 6 'Anderson, W.F.' 7 'Midwest Center for Structural Genomics (MCSG)' 8 # _citation.id primary _citation.title 'Crystal structure of glyoxalase/bleomycin resistance protein from Catenulispora acidiphila.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Filippova, E.V.' 1 primary 'Minasov, G.' 2 primary 'Shuvalova, L.' 3 primary 'Kiryukhina, O.' 4 primary 'Jedrzejczak, R.' 5 primary 'Joachimiak, A.' 6 primary 'Anderson, W.F.' 7 primary 'Midwest Center for Structural Genomics (MCSG)' 8 # _cell.entry_id 4G6X _cell.length_a 61.969 _cell.length_b 61.969 _cell.length_c 77.842 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4G6X _symmetry.space_group_name_H-M 'P 43 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Glyoxalase/bleomycin resistance protein/dioxygenase' 16950.324 1 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 water nat water 18.015 96 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)HHHHHHSSGVDLGTENLYFQSNA(MSE)RIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAP DGTQLLLEPSSHAAVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTD(MSE)GPVVTAILDDTCGNLIQL (MSE)QIAYDG ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGVDLGTENLYFQSNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLE PSSHAAVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIAYDG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier MCSG-APC103202 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 ASN n 1 24 ALA n 1 25 MSE n 1 26 ARG n 1 27 ILE n 1 28 HIS n 1 29 LEU n 1 30 THR n 1 31 ASN n 1 32 VAL n 1 33 PHE n 1 34 VAL n 1 35 ASP n 1 36 ASP n 1 37 GLN n 1 38 ALA n 1 39 LYS n 1 40 ALA n 1 41 GLU n 1 42 SER n 1 43 PHE n 1 44 TYR n 1 45 THR n 1 46 GLY n 1 47 LYS n 1 48 LEU n 1 49 GLY n 1 50 PHE n 1 51 LEU n 1 52 VAL n 1 53 LYS n 1 54 ALA n 1 55 ASP n 1 56 VAL n 1 57 PRO n 1 58 VAL n 1 59 GLY n 1 60 ALA n 1 61 ASP n 1 62 ARG n 1 63 TRP n 1 64 LEU n 1 65 THR n 1 66 VAL n 1 67 VAL n 1 68 SER n 1 69 PRO n 1 70 GLU n 1 71 ALA n 1 72 PRO n 1 73 ASP n 1 74 GLY n 1 75 THR n 1 76 GLN n 1 77 LEU n 1 78 LEU n 1 79 LEU n 1 80 GLU n 1 81 PRO n 1 82 SER n 1 83 SER n 1 84 HIS n 1 85 ALA n 1 86 ALA n 1 87 VAL n 1 88 THR n 1 89 PRO n 1 90 PHE n 1 91 LYS n 1 92 GLU n 1 93 ALA n 1 94 LEU n 1 95 VAL n 1 96 ALA n 1 97 ASP n 1 98 GLY n 1 99 ILE n 1 100 PRO n 1 101 ALA n 1 102 ALA n 1 103 SER n 1 104 PHE n 1 105 ALA n 1 106 VAL n 1 107 ASP n 1 108 ASP n 1 109 ILE n 1 110 ALA n 1 111 ALA n 1 112 GLU n 1 113 TYR n 1 114 GLU n 1 115 ARG n 1 116 LEU n 1 117 SER n 1 118 ALA n 1 119 LEU n 1 120 GLY n 1 121 VAL n 1 122 ARG n 1 123 PHE n 1 124 THR n 1 125 GLN n 1 126 GLU n 1 127 PRO n 1 128 THR n 1 129 ASP n 1 130 MSE n 1 131 GLY n 1 132 PRO n 1 133 VAL n 1 134 VAL n 1 135 THR n 1 136 ALA n 1 137 ILE n 1 138 LEU n 1 139 ASP n 1 140 ASP n 1 141 THR n 1 142 CYS n 1 143 GLY n 1 144 ASN n 1 145 LEU n 1 146 ILE n 1 147 GLN n 1 148 LEU n 1 149 MSE n 1 150 GLN n 1 151 ILE n 1 152 ALA n 1 153 TYR n 1 154 ASP n 1 155 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Caci_4633 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 44928' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Catenulispora acidiphila' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 479433 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG57 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C7PY34_CATAD _struct_ref.pdbx_db_accession C7PY34 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPAASF AVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIAYDG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4G6X _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 25 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 155 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession C7PY34 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 131 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 131 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4G6X MSE A 1 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -23 1 1 4G6X HIS A 2 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -22 2 1 4G6X HIS A 3 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -21 3 1 4G6X HIS A 4 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -20 4 1 4G6X HIS A 5 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -19 5 1 4G6X HIS A 6 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -18 6 1 4G6X HIS A 7 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -17 7 1 4G6X SER A 8 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -16 8 1 4G6X SER A 9 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -15 9 1 4G6X GLY A 10 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -14 10 1 4G6X VAL A 11 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -13 11 1 4G6X ASP A 12 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -12 12 1 4G6X LEU A 13 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -11 13 1 4G6X GLY A 14 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -10 14 1 4G6X THR A 15 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -9 15 1 4G6X GLU A 16 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -8 16 1 4G6X ASN A 17 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -7 17 1 4G6X LEU A 18 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -6 18 1 4G6X TYR A 19 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -5 19 1 4G6X PHE A 20 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -4 20 1 4G6X GLN A 21 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -3 21 1 4G6X SER A 22 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -2 22 1 4G6X ASN A 23 ? UNP C7PY34 ? ? 'EXPRESSION TAG' -1 23 1 4G6X ALA A 24 ? UNP C7PY34 ? ? 'EXPRESSION TAG' 0 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4G6X _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.20 _exptl_crystal.density_percent_sol 44.20 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.1 M Tris-HCL, 1.5 M Ammonium Sulfate, 15% Glycerol, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2012-07-12 _diffrn_detector.details MIRROR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI-111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97856 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-G' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-G _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97856 # _reflns.entry_id 4G6X _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.00 _reflns.d_resolution_high 1.73 _reflns.number_obs 30170 _reflns.number_all 30170 _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 42.24 _reflns.B_iso_Wilson_estimate 38.7 _reflns.pdbx_redundancy 7.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.73 _reflns_shell.d_res_low 1.76 _reflns_shell.percent_possible_all 87.1 _reflns_shell.Rmerge_I_obs 0.45 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4G6X _refine.ls_number_reflns_obs 15590 _refine.ls_number_reflns_all 15590 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.80 _refine.ls_d_res_high 1.73 _refine.ls_percent_reflns_obs 99.29 _refine.ls_R_factor_obs 0.16685 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16564 _refine.ls_R_factor_R_free 0.19105 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 828 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.975 _refine.correlation_coeff_Fo_to_Fc_free 0.967 _refine.B_iso_mean 39.307 _refine.aniso_B[1][1] 2.60 _refine.aniso_B[2][2] 2.60 _refine.aniso_B[3][3] -5.20 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ISOTROPIC _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.090 _refine.pdbx_overall_ESU_R_Free 0.089 _refine.overall_SU_ML 0.068 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.189 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4G6X _refine_analyze.Luzzati_coordinate_error_obs 0.23 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 969 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 96 _refine_hist.number_atoms_total 1071 _refine_hist.d_res_high 1.73 _refine_hist.d_res_low 28.80 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.015 0.020 ? 1000 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 956 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.788 1.984 ? 1366 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.907 3.000 ? 2204 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.210 5.000 ? 130 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 39.035 25.366 ? 41 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 11.977 15.000 ? 145 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 16.141 15.000 ? 4 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.127 0.200 ? 164 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.009 0.021 ? 1138 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.002 0.020 ? 206 ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.726 _refine_ls_shell.d_res_low 1.771 _refine_ls_shell.number_reflns_R_work 1044 _refine_ls_shell.R_factor_R_work 0.287 _refine_ls_shell.percent_reflns_obs 92.81 _refine_ls_shell.R_factor_R_free 0.251 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 53 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4G6X _struct.title 'Crystal structure of glyoxalase/bleomycin resistance protein from Catenulispora acidiphila.' _struct.pdbx_descriptor 'Glyoxalase/bleomycin resistance protein/dioxygenase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4G6X _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, dioxygenase, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 36 ? LYS A 47 ? ASP A 12 LYS A 23 1 ? 12 HELX_P HELX_P2 2 ALA A 86 ? ASP A 97 ? ALA A 62 ASP A 73 1 ? 12 HELX_P HELX_P3 3 ASP A 108 ? LEU A 119 ? ASP A 84 LEU A 95 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 24 C ? ? ? 1_555 A MSE 25 N ? ? A ALA 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A MSE 25 C ? ? ? 1_555 A ARG 26 N ? ? A MSE 1 A ARG 2 1_555 ? ? ? ? ? ? ? 1.317 ? covale3 covale ? ? A ASP 129 C ? ? ? 1_555 A MSE 130 N ? ? A ASP 105 A MSE 106 1_555 ? ? ? ? ? ? ? 1.334 ? covale4 covale ? ? A MSE 130 C ? ? ? 1_555 A GLY 131 N ? ? A MSE 106 A GLY 107 1_555 ? ? ? ? ? ? ? 1.333 ? covale5 covale ? ? A LEU 148 C ? ? ? 1_555 A MSE 149 N ? ? A LEU 124 A MSE 125 1_555 ? ? ? ? ? ? ? 1.318 ? covale6 covale ? ? A MSE 149 C ? ? ? 1_555 A GLN 150 N ? ? A MSE 125 A GLN 126 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 29 ? VAL A 34 ? LEU A 5 VAL A 10 A 2 GLN A 76 ? PRO A 81 ? GLN A 52 PRO A 57 A 3 ASP A 61 ? VAL A 67 ? ASP A 37 VAL A 43 A 4 LEU A 51 ? VAL A 58 ? LEU A 27 VAL A 34 B 1 ALA A 102 ? VAL A 106 ? ALA A 78 VAL A 82 B 2 LEU A 145 ? GLN A 150 ? LEU A 121 GLN A 126 B 3 VAL A 134 ? ASP A 139 ? VAL A 110 ASP A 115 B 4 PHE A 123 ? ASP A 129 ? PHE A 99 ASP A 105 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 34 ? N VAL A 10 O GLU A 80 ? O GLU A 56 A 2 3 O LEU A 79 ? O LEU A 55 N LEU A 64 ? N LEU A 40 A 3 4 O ASP A 61 ? O ASP A 37 N VAL A 58 ? N VAL A 34 B 1 2 N ALA A 102 ? N ALA A 78 O GLN A 147 ? O GLN A 123 B 2 3 O GLN A 150 ? O GLN A 126 N VAL A 134 ? N VAL A 110 B 3 4 O THR A 135 ? O THR A 111 N THR A 128 ? N THR A 104 # _database_PDB_matrix.entry_id 4G6X _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4G6X _atom_sites.fract_transf_matrix[1][1] 0.016137 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016137 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012847 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -23 ? ? ? A . n A 1 2 HIS 2 -22 ? ? ? A . n A 1 3 HIS 3 -21 ? ? ? A . n A 1 4 HIS 4 -20 ? ? ? A . n A 1 5 HIS 5 -19 ? ? ? A . n A 1 6 HIS 6 -18 ? ? ? A . n A 1 7 HIS 7 -17 ? ? ? A . n A 1 8 SER 8 -16 ? ? ? A . n A 1 9 SER 9 -15 ? ? ? A . n A 1 10 GLY 10 -14 ? ? ? A . n A 1 11 VAL 11 -13 ? ? ? A . n A 1 12 ASP 12 -12 ? ? ? A . n A 1 13 LEU 13 -11 ? ? ? A . n A 1 14 GLY 14 -10 ? ? ? A . n A 1 15 THR 15 -9 ? ? ? A . n A 1 16 GLU 16 -8 ? ? ? A . n A 1 17 ASN 17 -7 ? ? ? A . n A 1 18 LEU 18 -6 ? ? ? A . n A 1 19 TYR 19 -5 ? ? ? A . n A 1 20 PHE 20 -4 ? ? ? A . n A 1 21 GLN 21 -3 ? ? ? A . n A 1 22 SER 22 -2 ? ? ? A . n A 1 23 ASN 23 -1 -1 ASN ASN A . n A 1 24 ALA 24 0 0 ALA ALA A . n A 1 25 MSE 25 1 1 MSE MSE A . n A 1 26 ARG 26 2 2 ARG ARG A . n A 1 27 ILE 27 3 3 ILE ILE A . n A 1 28 HIS 28 4 4 HIS HIS A . n A 1 29 LEU 29 5 5 LEU LEU A . n A 1 30 THR 30 6 6 THR THR A . n A 1 31 ASN 31 7 7 ASN ASN A . n A 1 32 VAL 32 8 8 VAL VAL A . n A 1 33 PHE 33 9 9 PHE PHE A . n A 1 34 VAL 34 10 10 VAL VAL A . n A 1 35 ASP 35 11 11 ASP ASP A . n A 1 36 ASP 36 12 12 ASP ASP A . n A 1 37 GLN 37 13 13 GLN GLN A . n A 1 38 ALA 38 14 14 ALA ALA A . n A 1 39 LYS 39 15 15 LYS LYS A . n A 1 40 ALA 40 16 16 ALA ALA A . n A 1 41 GLU 41 17 17 GLU GLU A . n A 1 42 SER 42 18 18 SER SER A . n A 1 43 PHE 43 19 19 PHE PHE A . n A 1 44 TYR 44 20 20 TYR TYR A . n A 1 45 THR 45 21 21 THR THR A . n A 1 46 GLY 46 22 22 GLY GLY A . n A 1 47 LYS 47 23 23 LYS LYS A . n A 1 48 LEU 48 24 24 LEU LEU A . n A 1 49 GLY 49 25 25 GLY GLY A . n A 1 50 PHE 50 26 26 PHE PHE A . n A 1 51 LEU 51 27 27 LEU LEU A . n A 1 52 VAL 52 28 28 VAL VAL A . n A 1 53 LYS 53 29 29 LYS LYS A . n A 1 54 ALA 54 30 30 ALA ALA A . n A 1 55 ASP 55 31 31 ASP ASP A . n A 1 56 VAL 56 32 32 VAL VAL A . n A 1 57 PRO 57 33 33 PRO PRO A . n A 1 58 VAL 58 34 34 VAL VAL A . n A 1 59 GLY 59 35 35 GLY GLY A . n A 1 60 ALA 60 36 36 ALA ALA A . n A 1 61 ASP 61 37 37 ASP ASP A . n A 1 62 ARG 62 38 38 ARG ARG A . n A 1 63 TRP 63 39 39 TRP TRP A . n A 1 64 LEU 64 40 40 LEU LEU A . n A 1 65 THR 65 41 41 THR THR A . n A 1 66 VAL 66 42 42 VAL VAL A . n A 1 67 VAL 67 43 43 VAL VAL A . n A 1 68 SER 68 44 44 SER SER A . n A 1 69 PRO 69 45 45 PRO PRO A . n A 1 70 GLU 70 46 46 GLU GLU A . n A 1 71 ALA 71 47 47 ALA ALA A . n A 1 72 PRO 72 48 48 PRO PRO A . n A 1 73 ASP 73 49 49 ASP ASP A . n A 1 74 GLY 74 50 50 GLY GLY A . n A 1 75 THR 75 51 51 THR THR A . n A 1 76 GLN 76 52 52 GLN GLN A . n A 1 77 LEU 77 53 53 LEU LEU A . n A 1 78 LEU 78 54 54 LEU LEU A . n A 1 79 LEU 79 55 55 LEU LEU A . n A 1 80 GLU 80 56 56 GLU GLU A . n A 1 81 PRO 81 57 57 PRO PRO A . n A 1 82 SER 82 58 58 SER SER A . n A 1 83 SER 83 59 59 SER SER A . n A 1 84 HIS 84 60 60 HIS HIS A . n A 1 85 ALA 85 61 61 ALA ALA A . n A 1 86 ALA 86 62 62 ALA ALA A . n A 1 87 VAL 87 63 63 VAL VAL A . n A 1 88 THR 88 64 64 THR THR A . n A 1 89 PRO 89 65 65 PRO PRO A . n A 1 90 PHE 90 66 66 PHE PHE A . n A 1 91 LYS 91 67 67 LYS LYS A . n A 1 92 GLU 92 68 68 GLU GLU A . n A 1 93 ALA 93 69 69 ALA ALA A . n A 1 94 LEU 94 70 70 LEU LEU A . n A 1 95 VAL 95 71 71 VAL VAL A . n A 1 96 ALA 96 72 72 ALA ALA A . n A 1 97 ASP 97 73 73 ASP ASP A . n A 1 98 GLY 98 74 74 GLY GLY A . n A 1 99 ILE 99 75 75 ILE ILE A . n A 1 100 PRO 100 76 76 PRO PRO A . n A 1 101 ALA 101 77 77 ALA ALA A . n A 1 102 ALA 102 78 78 ALA ALA A . n A 1 103 SER 103 79 79 SER SER A . n A 1 104 PHE 104 80 80 PHE PHE A . n A 1 105 ALA 105 81 81 ALA ALA A . n A 1 106 VAL 106 82 82 VAL VAL A . n A 1 107 ASP 107 83 83 ASP ASP A . n A 1 108 ASP 108 84 84 ASP ASP A . n A 1 109 ILE 109 85 85 ILE ILE A . n A 1 110 ALA 110 86 86 ALA ALA A . n A 1 111 ALA 111 87 87 ALA ALA A . n A 1 112 GLU 112 88 88 GLU GLU A . n A 1 113 TYR 113 89 89 TYR TYR A . n A 1 114 GLU 114 90 90 GLU GLU A . n A 1 115 ARG 115 91 91 ARG ARG A . n A 1 116 LEU 116 92 92 LEU LEU A . n A 1 117 SER 117 93 93 SER SER A . n A 1 118 ALA 118 94 94 ALA ALA A . n A 1 119 LEU 119 95 95 LEU LEU A . n A 1 120 GLY 120 96 96 GLY GLY A . n A 1 121 VAL 121 97 97 VAL VAL A . n A 1 122 ARG 122 98 98 ARG ARG A . n A 1 123 PHE 123 99 99 PHE PHE A . n A 1 124 THR 124 100 100 THR THR A . n A 1 125 GLN 125 101 101 GLN GLN A . n A 1 126 GLU 126 102 102 GLU GLU A . n A 1 127 PRO 127 103 103 PRO PRO A . n A 1 128 THR 128 104 104 THR THR A . n A 1 129 ASP 129 105 105 ASP ASP A . n A 1 130 MSE 130 106 106 MSE MSE A . n A 1 131 GLY 131 107 107 GLY GLY A . n A 1 132 PRO 132 108 108 PRO PRO A . n A 1 133 VAL 133 109 109 VAL VAL A . n A 1 134 VAL 134 110 110 VAL VAL A . n A 1 135 THR 135 111 111 THR THR A . n A 1 136 ALA 136 112 112 ALA ALA A . n A 1 137 ILE 137 113 113 ILE ILE A . n A 1 138 LEU 138 114 114 LEU LEU A . n A 1 139 ASP 139 115 115 ASP ASP A . n A 1 140 ASP 140 116 116 ASP ASP A . n A 1 141 THR 141 117 117 THR THR A . n A 1 142 CYS 142 118 118 CYS CYS A . n A 1 143 GLY 143 119 119 GLY GLY A . n A 1 144 ASN 144 120 120 ASN ASN A . n A 1 145 LEU 145 121 121 LEU LEU A . n A 1 146 ILE 146 122 122 ILE ILE A . n A 1 147 GLN 147 123 123 GLN GLN A . n A 1 148 LEU 148 124 124 LEU LEU A . n A 1 149 MSE 149 125 125 MSE MSE A . n A 1 150 GLN 150 126 126 GLN GLN A . n A 1 151 ILE 151 127 127 ILE ILE A . n A 1 152 ALA 152 128 ? ? ? A . n A 1 153 TYR 153 129 ? ? ? A . n A 1 154 ASP 154 130 ? ? ? A . n A 1 155 GLY 155 131 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 201 1 GOL GOL A . C 3 HOH 1 301 1 HOH HOH A . C 3 HOH 2 302 2 HOH HOH A . C 3 HOH 3 303 3 HOH HOH A . C 3 HOH 4 304 4 HOH HOH A . C 3 HOH 5 305 5 HOH HOH A . C 3 HOH 6 306 6 HOH HOH A . C 3 HOH 7 307 7 HOH HOH A . C 3 HOH 8 308 8 HOH HOH A . C 3 HOH 9 309 9 HOH HOH A . C 3 HOH 10 310 10 HOH HOH A . C 3 HOH 11 311 11 HOH HOH A . C 3 HOH 12 312 12 HOH HOH A . C 3 HOH 13 313 13 HOH HOH A . C 3 HOH 14 314 14 HOH HOH A . C 3 HOH 15 315 15 HOH HOH A . C 3 HOH 16 316 16 HOH HOH A . C 3 HOH 17 317 17 HOH HOH A . C 3 HOH 18 318 18 HOH HOH A . C 3 HOH 19 319 19 HOH HOH A . C 3 HOH 20 320 20 HOH HOH A . C 3 HOH 21 321 21 HOH HOH A . C 3 HOH 22 322 22 HOH HOH A . C 3 HOH 23 323 23 HOH HOH A . C 3 HOH 24 324 24 HOH HOH A . C 3 HOH 25 325 25 HOH HOH A . C 3 HOH 26 326 26 HOH HOH A . C 3 HOH 27 327 27 HOH HOH A . C 3 HOH 28 328 28 HOH HOH A . C 3 HOH 29 329 29 HOH HOH A . C 3 HOH 30 330 30 HOH HOH A . C 3 HOH 31 331 31 HOH HOH A . C 3 HOH 32 332 32 HOH HOH A . C 3 HOH 33 333 33 HOH HOH A . C 3 HOH 34 334 34 HOH HOH A . C 3 HOH 35 335 35 HOH HOH A . C 3 HOH 36 336 36 HOH HOH A . C 3 HOH 37 337 37 HOH HOH A . C 3 HOH 38 338 38 HOH HOH A . C 3 HOH 39 339 39 HOH HOH A . C 3 HOH 40 340 40 HOH HOH A . C 3 HOH 41 341 41 HOH HOH A . C 3 HOH 42 342 42 HOH HOH A . C 3 HOH 43 343 43 HOH HOH A . C 3 HOH 44 344 44 HOH HOH A . C 3 HOH 45 345 45 HOH HOH A . C 3 HOH 46 346 46 HOH HOH A . C 3 HOH 47 347 47 HOH HOH A . C 3 HOH 48 348 48 HOH HOH A . C 3 HOH 49 349 49 HOH HOH A . C 3 HOH 50 350 50 HOH HOH A . C 3 HOH 51 351 51 HOH HOH A . C 3 HOH 52 352 52 HOH HOH A . C 3 HOH 53 353 53 HOH HOH A . C 3 HOH 54 354 54 HOH HOH A . C 3 HOH 55 355 55 HOH HOH A . C 3 HOH 56 356 56 HOH HOH A . C 3 HOH 57 357 57 HOH HOH A . C 3 HOH 58 358 58 HOH HOH A . C 3 HOH 59 359 59 HOH HOH A . C 3 HOH 60 360 60 HOH HOH A . C 3 HOH 61 361 61 HOH HOH A . C 3 HOH 62 362 62 HOH HOH A . C 3 HOH 63 363 63 HOH HOH A . C 3 HOH 64 364 64 HOH HOH A . C 3 HOH 65 365 65 HOH HOH A . C 3 HOH 66 366 66 HOH HOH A . C 3 HOH 67 367 67 HOH HOH A . C 3 HOH 68 368 68 HOH HOH A . C 3 HOH 69 369 69 HOH HOH A . C 3 HOH 70 370 70 HOH HOH A . C 3 HOH 71 371 71 HOH HOH A . C 3 HOH 72 372 72 HOH HOH A . C 3 HOH 73 373 73 HOH HOH A . C 3 HOH 74 374 74 HOH HOH A . C 3 HOH 75 375 75 HOH HOH A . C 3 HOH 76 376 76 HOH HOH A . C 3 HOH 77 377 77 HOH HOH A . C 3 HOH 78 378 78 HOH HOH A . C 3 HOH 79 379 79 HOH HOH A . C 3 HOH 80 380 80 HOH HOH A . C 3 HOH 81 381 81 HOH HOH A . C 3 HOH 82 382 82 HOH HOH A . C 3 HOH 83 383 84 HOH HOH A . C 3 HOH 84 384 85 HOH HOH A . C 3 HOH 85 385 86 HOH HOH A . C 3 HOH 86 386 87 HOH HOH A . C 3 HOH 87 387 88 HOH HOH A . C 3 HOH 88 388 89 HOH HOH A . C 3 HOH 89 389 90 HOH HOH A . C 3 HOH 90 390 91 HOH HOH A . C 3 HOH 91 391 92 HOH HOH A . C 3 HOH 92 392 93 HOH HOH A . C 3 HOH 93 393 94 HOH HOH A . C 3 HOH 94 394 95 HOH HOH A . C 3 HOH 95 395 96 HOH HOH A . C 3 HOH 96 396 97 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 25 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 130 A MSE 106 ? MET SELENOMETHIONINE 3 A MSE 149 A MSE 125 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3990 ? 1 MORE -28 ? 1 'SSA (A^2)' 11490 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 61.9690000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 385 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-08-15 2 'Structure model' 1 1 2012-10-10 3 'Structure model' 1 2 2017-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.name' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 34.6796 59.0808 9.6445 0.0948 0.0142 0.1622 -0.0118 -0.0098 -0.0155 1.6524 1.6078 1.7045 -0.6252 0.4108 -0.2878 0.0142 -0.0650 0.1370 0.0198 -0.0921 -0.0530 -0.2497 0.0200 0.0779 'X-RAY DIFFRACTION' 2 ? refined 38.9809 49.2453 0.1299 0.0154 0.0328 0.1329 0.0170 0.0049 0.0182 1.4431 1.6000 2.1319 0.2149 0.1937 -0.3826 0.1152 0.1719 0.0352 -0.0311 -0.1004 -0.0536 0.0029 0.1082 -0.0149 'X-RAY DIFFRACTION' 3 ? refined 48.2321 56.2843 -3.1680 0.0524 0.1083 0.1998 0.0040 0.0342 0.0879 1.5008 4.5413 2.9679 -0.0598 0.5095 -1.6515 0.0665 0.3408 0.2172 -0.2333 -0.2601 -0.4295 -0.1811 0.3799 0.1936 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A -1 ? ? A 56 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 57 ? ? A 87 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 88 ? ? A 127 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' Max ? 1 HKL-3000 phasing . ? 2 REFMAC refinement 5.7.0029 ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id THR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 117 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 73.82 _pdbx_validate_torsion.psi -7.97 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -23 ? A MSE 1 2 1 Y 1 A HIS -22 ? A HIS 2 3 1 Y 1 A HIS -21 ? A HIS 3 4 1 Y 1 A HIS -20 ? A HIS 4 5 1 Y 1 A HIS -19 ? A HIS 5 6 1 Y 1 A HIS -18 ? A HIS 6 7 1 Y 1 A HIS -17 ? A HIS 7 8 1 Y 1 A SER -16 ? A SER 8 9 1 Y 1 A SER -15 ? A SER 9 10 1 Y 1 A GLY -14 ? A GLY 10 11 1 Y 1 A VAL -13 ? A VAL 11 12 1 Y 1 A ASP -12 ? A ASP 12 13 1 Y 1 A LEU -11 ? A LEU 13 14 1 Y 1 A GLY -10 ? A GLY 14 15 1 Y 1 A THR -9 ? A THR 15 16 1 Y 1 A GLU -8 ? A GLU 16 17 1 Y 1 A ASN -7 ? A ASN 17 18 1 Y 1 A LEU -6 ? A LEU 18 19 1 Y 1 A TYR -5 ? A TYR 19 20 1 Y 1 A PHE -4 ? A PHE 20 21 1 Y 1 A GLN -3 ? A GLN 21 22 1 Y 1 A SER -2 ? A SER 22 23 1 Y 1 A ALA 128 ? A ALA 152 24 1 Y 1 A TYR 129 ? A TYR 153 25 1 Y 1 A ASP 130 ? A ASP 154 26 1 Y 1 A GLY 131 ? A GLY 155 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH #