data_4GKC # _entry.id 4GKC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4GKC pdb_00004gkc 10.2210/pdb4gkc/pdb RCSB RCSB074291 ? ? WWPDB D_1000074291 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4GKC _pdbx_database_status.recvd_initial_deposition_date 2012-08-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nossoni, Z.' 1 'Geiger, J.H.' 2 # _citation.id primary _citation.title 'Tuning the electronic absorption of protein-embedded all-trans-retinal.' _citation.journal_abbrev Science _citation.journal_volume 338 _citation.page_first 1340 _citation.page_last 1343 _citation.year 2012 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23224553 _citation.pdbx_database_id_DOI 10.1126/science.1226135 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, W.' 1 ? primary 'Nossoni, Z.' 2 ? primary 'Berbasova, T.' 3 ? primary 'Watson, C.T.' 4 ? primary 'Yapici, I.' 5 ? primary 'Lee, K.S.' 6 ? primary 'Vasileiou, C.' 7 ? primary 'Geiger, J.H.' 8 ? primary 'Borhan, B.' 9 ? # _cell.entry_id 4GKC _cell.length_a 30.970 _cell.length_b 36.002 _cell.length_c 64.016 _cell.angle_alpha 86.10 _cell.angle_beta 86.46 _cell.angle_gamma 65.32 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4GKC _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Retinol-binding protein 2' 15589.603 2 ? Q108K,K40L,T51V,T53C,Y19W,R58W,T29L,Q4A ? ? 2 non-polymer syn RETINAL 284.436 2 ? ? ? ? 3 water nat water 18.015 354 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cellular retinol-binding protein II, CRBP-II' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TRDANGTWEMESNENFEGWMKALDIDFALRKIAVRLTQTLVIDQDGDNFKVKCTSTFWNYDVDFTVGVEFDEYTKSLDNR HVKALVTWEGDVLVCVQKGEKENRGWKKWIEGDKLYLELTCGDQVCRQVFKKK ; _entity_poly.pdbx_seq_one_letter_code_can ;TRDANGTWEMESNENFEGWMKALDIDFALRKIAVRLTQTLVIDQDGDNFKVKCTSTFWNYDVDFTVGVEFDEYTKSLDNR HVKALVTWEGDVLVCVQKGEKENRGWKKWIEGDKLYLELTCGDQVCRQVFKKK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 ARG n 1 3 ASP n 1 4 ALA n 1 5 ASN n 1 6 GLY n 1 7 THR n 1 8 TRP n 1 9 GLU n 1 10 MET n 1 11 GLU n 1 12 SER n 1 13 ASN n 1 14 GLU n 1 15 ASN n 1 16 PHE n 1 17 GLU n 1 18 GLY n 1 19 TRP n 1 20 MET n 1 21 LYS n 1 22 ALA n 1 23 LEU n 1 24 ASP n 1 25 ILE n 1 26 ASP n 1 27 PHE n 1 28 ALA n 1 29 LEU n 1 30 ARG n 1 31 LYS n 1 32 ILE n 1 33 ALA n 1 34 VAL n 1 35 ARG n 1 36 LEU n 1 37 THR n 1 38 GLN n 1 39 THR n 1 40 LEU n 1 41 VAL n 1 42 ILE n 1 43 ASP n 1 44 GLN n 1 45 ASP n 1 46 GLY n 1 47 ASP n 1 48 ASN n 1 49 PHE n 1 50 LYS n 1 51 VAL n 1 52 LYS n 1 53 CYS n 1 54 THR n 1 55 SER n 1 56 THR n 1 57 PHE n 1 58 TRP n 1 59 ASN n 1 60 TYR n 1 61 ASP n 1 62 VAL n 1 63 ASP n 1 64 PHE n 1 65 THR n 1 66 VAL n 1 67 GLY n 1 68 VAL n 1 69 GLU n 1 70 PHE n 1 71 ASP n 1 72 GLU n 1 73 TYR n 1 74 THR n 1 75 LYS n 1 76 SER n 1 77 LEU n 1 78 ASP n 1 79 ASN n 1 80 ARG n 1 81 HIS n 1 82 VAL n 1 83 LYS n 1 84 ALA n 1 85 LEU n 1 86 VAL n 1 87 THR n 1 88 TRP n 1 89 GLU n 1 90 GLY n 1 91 ASP n 1 92 VAL n 1 93 LEU n 1 94 VAL n 1 95 CYS n 1 96 VAL n 1 97 GLN n 1 98 LYS n 1 99 GLY n 1 100 GLU n 1 101 LYS n 1 102 GLU n 1 103 ASN n 1 104 ARG n 1 105 GLY n 1 106 TRP n 1 107 LYS n 1 108 LYS n 1 109 TRP n 1 110 ILE n 1 111 GLU n 1 112 GLY n 1 113 ASP n 1 114 LYS n 1 115 LEU n 1 116 TYR n 1 117 LEU n 1 118 GLU n 1 119 LEU n 1 120 THR n 1 121 CYS n 1 122 GLY n 1 123 ASP n 1 124 GLN n 1 125 VAL n 1 126 CYS n 1 127 ARG n 1 128 GLN n 1 129 VAL n 1 130 PHE n 1 131 LYS n 1 132 LYS n 1 133 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RBP2, CRBP2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet17 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RET2_HUMAN _struct_ref.pdbx_db_accession P50120 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTKVIDQDGDNFKTKTTSTFRNYDVDFTVGVEFDEYTKSLDNR HVKALVTWEGDVLVCVQKGEKENRGWKQWIEGDKLYLELTCGDQVCRQVFKKK ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4GKC A 1 ? 133 ? P50120 2 ? 134 ? 1 133 2 1 4GKC B 1 ? 133 ? P50120 2 ? 134 ? 1 133 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4GKC ALA A 4 ? UNP P50120 GLN 5 'engineered mutation' 4 1 1 4GKC TRP A 19 ? UNP P50120 TYR 20 'engineered mutation' 19 2 1 4GKC LEU A 29 ? UNP P50120 THR 30 'engineered mutation' 29 3 1 4GKC LEU A 40 ? UNP P50120 LYS 41 'engineered mutation' 40 4 1 4GKC VAL A 51 ? UNP P50120 THR 52 'engineered mutation' 51 5 1 4GKC CYS A 53 ? UNP P50120 THR 54 'engineered mutation' 53 6 1 4GKC TRP A 58 ? UNP P50120 ARG 59 'engineered mutation' 58 7 1 4GKC LYS A 108 ? UNP P50120 GLN 109 'engineered mutation' 108 8 2 4GKC ALA B 4 ? UNP P50120 GLN 5 'engineered mutation' 4 9 2 4GKC TRP B 19 ? UNP P50120 TYR 20 'engineered mutation' 19 10 2 4GKC LEU B 29 ? UNP P50120 THR 30 'engineered mutation' 29 11 2 4GKC LEU B 40 ? UNP P50120 LYS 41 'engineered mutation' 40 12 2 4GKC VAL B 51 ? UNP P50120 THR 52 'engineered mutation' 51 13 2 4GKC CYS B 53 ? UNP P50120 THR 54 'engineered mutation' 53 14 2 4GKC TRP B 58 ? UNP P50120 ARG 59 'engineered mutation' 58 15 2 4GKC LYS B 108 ? UNP P50120 GLN 109 'engineered mutation' 108 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4GKC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_percent_sol 40.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '40% PEG 4000, 0.1M CH3COONa.3H2O, 0.1 M CH3COONH4, EVAPORATION, temperature 298K, pH 4.6' # _diffrn.id 1 _diffrn.ambient_temp 200 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MAR300 _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1272 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.1272 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4GKC _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.122 _reflns.d_resolution_high 1.30 _reflns.number_obs 50433 _reflns.number_all 179578 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4GKC _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 50433 _refine.ls_number_reflns_all 179578 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.12 _refine.ls_d_res_high 1.30 _refine.ls_percent_reflns_obs 86.38 _refine.ls_R_factor_obs 0.18897 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18704 _refine.ls_R_factor_R_free 0.22493 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2670 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.959 _refine.correlation_coeff_Fo_to_Fc_free 0.939 _refine.B_iso_mean 18.607 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 2rcq _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.067 _refine.pdbx_overall_ESU_R_Free 0.071 _refine.overall_SU_ML 0.037 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.831 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2187 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 354 _refine_hist.number_atoms_total 2581 _refine_hist.d_res_high 1.30 _refine_hist.d_res_low 28.12 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.029 0.022 ? 2331 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.491 1.941 ? 3157 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.950 5.000 ? 278 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.828 25.126 ? 119 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.281 15.000 ? 422 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.299 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.141 0.200 ? 336 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.014 0.020 ? 1790 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.581 1.500 ? 1352 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.682 2.000 ? 2191 'X-RAY DIFFRACTION' ? r_scbond_it 3.817 3.000 ? 979 'X-RAY DIFFRACTION' ? r_scangle_it 5.880 4.500 ? 966 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.301 _refine_ls_shell.d_res_low 1.334 _refine_ls_shell.number_reflns_R_work 2926 _refine_ls_shell.R_factor_R_work 0.290 _refine_ls_shell.percent_reflns_obs 68.40 _refine_ls_shell.R_factor_R_free 0.372 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 158 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4GKC _struct.title ;Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal at 1.33 ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4GKC _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'Retinal complex+ beta barrel, transport protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 15 ? LEU A 23 ? ASN A 15 LEU A 23 1 ? 9 HELX_P HELX_P2 2 ASP A 26 ? VAL A 34 ? ASP A 26 VAL A 34 1 ? 9 HELX_P HELX_P3 3 ASN B 15 ? LEU B 23 ? ASN B 15 LEU B 23 1 ? 9 HELX_P HELX_P4 4 ASP B 26 ? VAL B 34 ? ASP B 26 VAL B 34 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A LYS 108 NZ ? ? ? 1_555 C RET . C15 ? ? A LYS 108 A RET 201 1_555 ? ? ? ? ? ? ? 1.242 ? ? covale2 covale one ? B LYS 108 NZ ? ? ? 1_555 D RET . C15 ? ? B LYS 108 B RET 201 1_555 ? ? ? ? ? ? ? 1.240 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 10 ? B ? 10 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel B 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 60 ? THR A 65 ? TYR A 60 THR A 65 A 2 ASN A 48 ? THR A 54 ? ASN A 48 THR A 54 A 3 THR A 39 ? ASP A 45 ? THR A 39 ASP A 45 A 4 GLY A 6 ? GLU A 14 ? GLY A 6 GLU A 14 A 5 GLN A 124 ? LYS A 132 ? GLN A 124 LYS A 132 A 6 LYS A 114 ? CYS A 121 ? LYS A 114 CYS A 121 A 7 GLY A 105 ? GLU A 111 ? GLY A 105 GLU A 111 A 8 VAL A 92 ? LYS A 98 ? VAL A 92 LYS A 98 A 9 HIS A 81 ? GLU A 89 ? HIS A 81 GLU A 89 A 10 PHE A 70 ? TYR A 73 ? PHE A 70 TYR A 73 B 1 TYR B 60 ? THR B 65 ? TYR B 60 THR B 65 B 2 ASN B 48 ? THR B 54 ? ASN B 48 THR B 54 B 3 THR B 39 ? ASP B 45 ? THR B 39 ASP B 45 B 4 GLY B 6 ? GLU B 14 ? GLY B 6 GLU B 14 B 5 GLN B 124 ? LYS B 132 ? GLN B 124 LYS B 132 B 6 LYS B 114 ? CYS B 121 ? LYS B 114 CYS B 121 B 7 GLY B 105 ? GLU B 111 ? GLY B 105 GLU B 111 B 8 VAL B 92 ? LYS B 98 ? VAL B 92 LYS B 98 B 9 HIS B 81 ? GLU B 89 ? HIS B 81 GLU B 89 B 10 PHE B 70 ? TYR B 73 ? PHE B 70 TYR B 73 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 60 ? O TYR A 60 N CYS A 53 ? N CYS A 53 A 2 3 O ASN A 48 ? O ASN A 48 N ASP A 45 ? N ASP A 45 A 3 4 O LEU A 40 ? O LEU A 40 N TRP A 8 ? N TRP A 8 A 4 5 N GLU A 11 ? N GLU A 11 O VAL A 129 ? O VAL A 129 A 5 6 O GLN A 128 ? O GLN A 128 N LEU A 117 ? N LEU A 117 A 6 7 O LYS A 114 ? O LYS A 114 N GLU A 111 ? N GLU A 111 A 7 8 O TRP A 106 ? O TRP A 106 N CYS A 95 ? N CYS A 95 A 8 9 O VAL A 94 ? O VAL A 94 N THR A 87 ? N THR A 87 A 9 10 O ALA A 84 ? O ALA A 84 N PHE A 70 ? N PHE A 70 B 1 2 O PHE B 64 ? O PHE B 64 N PHE B 49 ? N PHE B 49 B 2 3 O THR B 54 ? O THR B 54 N THR B 39 ? N THR B 39 B 3 4 O LEU B 40 ? O LEU B 40 N TRP B 8 ? N TRP B 8 B 4 5 N GLU B 11 ? N GLU B 11 O VAL B 129 ? O VAL B 129 B 5 6 O GLN B 128 ? O GLN B 128 N LEU B 117 ? N LEU B 117 B 6 7 O LYS B 114 ? O LYS B 114 N GLU B 111 ? N GLU B 111 B 7 8 O LYS B 108 ? O LYS B 108 N LEU B 93 ? N LEU B 93 B 8 9 O VAL B 94 ? O VAL B 94 N THR B 87 ? N THR B 87 B 9 10 O ALA B 84 ? O ALA B 84 N PHE B 70 ? N PHE B 70 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A RET 201 ? 9 'BINDING SITE FOR RESIDUE RET A 201' AC2 Software B RET 201 ? 8 'BINDING SITE FOR RESIDUE RET B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 TRP A 19 ? TRP A 19 . ? 1_555 ? 2 AC1 9 ALA A 33 ? ALA A 33 . ? 1_555 ? 3 AC1 9 GLN A 38 ? GLN A 38 . ? 1_555 ? 4 AC1 9 TRP A 58 ? TRP A 58 . ? 1_555 ? 5 AC1 9 ASN A 59 ? ASN A 59 . ? 1_555 ? 6 AC1 9 TYR A 60 ? TYR A 60 . ? 1_555 ? 7 AC1 9 LEU A 77 ? LEU A 77 . ? 1_555 ? 8 AC1 9 TRP A 106 ? TRP A 106 . ? 1_555 ? 9 AC1 9 LYS A 108 ? LYS A 108 . ? 1_555 ? 10 AC2 8 ALA B 33 ? ALA B 33 . ? 1_555 ? 11 AC2 8 GLN B 38 ? GLN B 38 . ? 1_555 ? 12 AC2 8 TRP B 58 ? TRP B 58 . ? 1_555 ? 13 AC2 8 LEU B 77 ? LEU B 77 . ? 1_555 ? 14 AC2 8 TRP B 106 ? TRP B 106 . ? 1_555 ? 15 AC2 8 LYS B 108 ? LYS B 108 . ? 1_555 ? 16 AC2 8 HOH F . ? HOH B 341 . ? 1_555 ? 17 AC2 8 HOH F . ? HOH B 391 . ? 1_555 ? # _database_PDB_matrix.entry_id 4GKC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4GKC _atom_sites.fract_transf_matrix[1][1] 0.032289 _atom_sites.fract_transf_matrix[1][2] -0.014838 _atom_sites.fract_transf_matrix[1][3] -0.001308 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.030569 _atom_sites.fract_transf_matrix[2][3] -0.001425 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015668 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 TRP 8 8 8 TRP TRP A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 MET 10 10 10 MET MET A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 TRP 19 19 19 TRP TRP A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 CYS 53 53 53 CYS CYS A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 PHE 57 57 57 PHE PHE A . n A 1 58 TRP 58 58 58 TRP TRP A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 HIS 81 81 81 HIS HIS A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 TRP 88 88 88 TRP TRP A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 GLN 97 97 97 GLN GLN A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 TRP 106 106 106 TRP TRP A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 TRP 109 109 109 TRP TRP A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 CYS 121 121 121 CYS CYS A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 GLN 124 124 124 GLN GLN A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 CYS 126 126 126 CYS CYS A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 VAL 129 129 129 VAL VAL A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 LYS 133 133 133 LYS LYS A . n B 1 1 THR 1 1 1 THR THR B . n B 1 2 ARG 2 2 2 ARG ARG B . n B 1 3 ASP 3 3 3 ASP ASP B . n B 1 4 ALA 4 4 4 ALA ALA B . n B 1 5 ASN 5 5 5 ASN ASN B . n B 1 6 GLY 6 6 6 GLY GLY B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 TRP 8 8 8 TRP TRP B . n B 1 9 GLU 9 9 9 GLU GLU B . n B 1 10 MET 10 10 10 MET MET B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 SER 12 12 12 SER SER B . n B 1 13 ASN 13 13 13 ASN ASN B . n B 1 14 GLU 14 14 14 GLU GLU B . n B 1 15 ASN 15 15 15 ASN ASN B . n B 1 16 PHE 16 16 16 PHE PHE B . n B 1 17 GLU 17 17 17 GLU GLU B . n B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 TRP 19 19 19 TRP TRP B . n B 1 20 MET 20 20 20 MET MET B . n B 1 21 LYS 21 21 21 LYS LYS B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 ASP 24 24 24 ASP ASP B . n B 1 25 ILE 25 25 25 ILE ILE B . n B 1 26 ASP 26 26 26 ASP ASP B . n B 1 27 PHE 27 27 27 PHE PHE B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 ARG 30 30 30 ARG ARG B . n B 1 31 LYS 31 31 31 LYS LYS B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 VAL 34 34 34 VAL VAL B . n B 1 35 ARG 35 35 35 ARG ARG B . n B 1 36 LEU 36 36 36 LEU LEU B . n B 1 37 THR 37 37 37 THR THR B . n B 1 38 GLN 38 38 38 GLN GLN B . n B 1 39 THR 39 39 39 THR THR B . n B 1 40 LEU 40 40 40 LEU LEU B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 ILE 42 42 42 ILE ILE B . n B 1 43 ASP 43 43 43 ASP ASP B . n B 1 44 GLN 44 44 44 GLN GLN B . n B 1 45 ASP 45 45 45 ASP ASP B . n B 1 46 GLY 46 46 46 GLY GLY B . n B 1 47 ASP 47 47 47 ASP ASP B . n B 1 48 ASN 48 48 48 ASN ASN B . n B 1 49 PHE 49 49 49 PHE PHE B . n B 1 50 LYS 50 50 50 LYS LYS B . n B 1 51 VAL 51 51 51 VAL VAL B . n B 1 52 LYS 52 52 52 LYS LYS B . n B 1 53 CYS 53 53 53 CYS CYS B . n B 1 54 THR 54 54 54 THR THR B . n B 1 55 SER 55 55 55 SER SER B . n B 1 56 THR 56 56 56 THR THR B . n B 1 57 PHE 57 57 57 PHE PHE B . n B 1 58 TRP 58 58 58 TRP TRP B . n B 1 59 ASN 59 59 59 ASN ASN B . n B 1 60 TYR 60 60 60 TYR TYR B . n B 1 61 ASP 61 61 61 ASP ASP B . n B 1 62 VAL 62 62 62 VAL VAL B . n B 1 63 ASP 63 63 63 ASP ASP B . n B 1 64 PHE 64 64 64 PHE PHE B . n B 1 65 THR 65 65 65 THR THR B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 GLY 67 67 67 GLY GLY B . n B 1 68 VAL 68 68 68 VAL VAL B . n B 1 69 GLU 69 69 69 GLU GLU B . n B 1 70 PHE 70 70 70 PHE PHE B . n B 1 71 ASP 71 71 71 ASP ASP B . n B 1 72 GLU 72 72 72 GLU GLU B . n B 1 73 TYR 73 73 73 TYR TYR B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 LYS 75 75 75 LYS LYS B . n B 1 76 SER 76 76 76 SER SER B . n B 1 77 LEU 77 77 77 LEU LEU B . n B 1 78 ASP 78 78 78 ASP ASP B . n B 1 79 ASN 79 79 79 ASN ASN B . n B 1 80 ARG 80 80 80 ARG ARG B . n B 1 81 HIS 81 81 81 HIS HIS B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 LYS 83 83 83 LYS LYS B . n B 1 84 ALA 84 84 84 ALA ALA B . n B 1 85 LEU 85 85 85 LEU LEU B . n B 1 86 VAL 86 86 86 VAL VAL B . n B 1 87 THR 87 87 87 THR THR B . n B 1 88 TRP 88 88 88 TRP TRP B . n B 1 89 GLU 89 89 89 GLU GLU B . n B 1 90 GLY 90 90 90 GLY GLY B . n B 1 91 ASP 91 91 91 ASP ASP B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 LEU 93 93 93 LEU LEU B . n B 1 94 VAL 94 94 94 VAL VAL B . n B 1 95 CYS 95 95 95 CYS CYS B . n B 1 96 VAL 96 96 96 VAL VAL B . n B 1 97 GLN 97 97 97 GLN GLN B . n B 1 98 LYS 98 98 98 LYS LYS B . n B 1 99 GLY 99 99 99 GLY GLY B . n B 1 100 GLU 100 100 100 GLU GLU B . n B 1 101 LYS 101 101 101 LYS LYS B . n B 1 102 GLU 102 102 102 GLU GLU B . n B 1 103 ASN 103 103 103 ASN ASN B . n B 1 104 ARG 104 104 104 ARG ARG B . n B 1 105 GLY 105 105 105 GLY GLY B . n B 1 106 TRP 106 106 106 TRP TRP B . n B 1 107 LYS 107 107 107 LYS LYS B . n B 1 108 LYS 108 108 108 LYS LYS B . n B 1 109 TRP 109 109 109 TRP TRP B . n B 1 110 ILE 110 110 110 ILE ILE B . n B 1 111 GLU 111 111 111 GLU GLU B . n B 1 112 GLY 112 112 112 GLY GLY B . n B 1 113 ASP 113 113 113 ASP ASP B . n B 1 114 LYS 114 114 114 LYS LYS B . n B 1 115 LEU 115 115 115 LEU LEU B . n B 1 116 TYR 116 116 116 TYR TYR B . n B 1 117 LEU 117 117 117 LEU LEU B . n B 1 118 GLU 118 118 118 GLU GLU B . n B 1 119 LEU 119 119 119 LEU LEU B . n B 1 120 THR 120 120 120 THR THR B . n B 1 121 CYS 121 121 121 CYS CYS B . n B 1 122 GLY 122 122 122 GLY GLY B . n B 1 123 ASP 123 123 123 ASP ASP B . n B 1 124 GLN 124 124 124 GLN GLN B . n B 1 125 VAL 125 125 125 VAL VAL B . n B 1 126 CYS 126 126 126 CYS CYS B . n B 1 127 ARG 127 127 127 ARG ARG B . n B 1 128 GLN 128 128 128 GLN GLN B . n B 1 129 VAL 129 129 129 VAL VAL B . n B 1 130 PHE 130 130 130 PHE PHE B . n B 1 131 LYS 131 131 131 LYS LYS B . n B 1 132 LYS 132 132 132 LYS LYS B . n B 1 133 LYS 133 133 133 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RET 1 201 1 RET RET A . D 2 RET 1 201 1 RET RET B . E 3 HOH 1 301 1 HOH HOH A . E 3 HOH 2 302 3 HOH HOH A . E 3 HOH 3 303 4 HOH HOH A . E 3 HOH 4 304 8 HOH HOH A . E 3 HOH 5 305 11 HOH HOH A . E 3 HOH 6 306 13 HOH HOH A . E 3 HOH 7 307 18 HOH HOH A . E 3 HOH 8 308 19 HOH HOH A . E 3 HOH 9 309 20 HOH HOH A . E 3 HOH 10 310 22 HOH HOH A . E 3 HOH 11 311 23 HOH HOH A . E 3 HOH 12 312 25 HOH HOH A . E 3 HOH 13 313 27 HOH HOH A . E 3 HOH 14 314 28 HOH HOH A . E 3 HOH 15 315 29 HOH HOH A . E 3 HOH 16 316 32 HOH HOH A . E 3 HOH 17 317 33 HOH HOH A . E 3 HOH 18 318 34 HOH HOH A . E 3 HOH 19 319 36 HOH HOH A . E 3 HOH 20 320 38 HOH HOH A . E 3 HOH 21 321 39 HOH HOH A . E 3 HOH 22 322 41 HOH HOH A . E 3 HOH 23 323 43 HOH HOH A . E 3 HOH 24 324 46 HOH HOH A . E 3 HOH 25 325 47 HOH HOH A . E 3 HOH 26 326 48 HOH HOH A . E 3 HOH 27 327 50 HOH HOH A . E 3 HOH 28 328 51 HOH HOH A . E 3 HOH 29 329 58 HOH HOH A . E 3 HOH 30 330 60 HOH HOH A . E 3 HOH 31 331 61 HOH HOH A . E 3 HOH 32 332 62 HOH HOH A . E 3 HOH 33 333 63 HOH HOH A . E 3 HOH 34 334 66 HOH HOH A . E 3 HOH 35 335 67 HOH HOH A . E 3 HOH 36 336 68 HOH HOH A . E 3 HOH 37 337 72 HOH HOH A . E 3 HOH 38 338 73 HOH HOH A . E 3 HOH 39 339 78 HOH HOH A . E 3 HOH 40 340 80 HOH HOH A . E 3 HOH 41 341 81 HOH HOH A . E 3 HOH 42 342 82 HOH HOH A . E 3 HOH 43 343 83 HOH HOH A . E 3 HOH 44 344 85 HOH HOH A . E 3 HOH 45 345 90 HOH HOH A . E 3 HOH 46 346 91 HOH HOH A . E 3 HOH 47 347 92 HOH HOH A . E 3 HOH 48 348 93 HOH HOH A . E 3 HOH 49 349 94 HOH HOH A . E 3 HOH 50 350 95 HOH HOH A . E 3 HOH 51 351 97 HOH HOH A . E 3 HOH 52 352 100 HOH HOH A . E 3 HOH 53 353 104 HOH HOH A . E 3 HOH 54 354 107 HOH HOH A . E 3 HOH 55 355 108 HOH HOH A . E 3 HOH 56 356 113 HOH HOH A . E 3 HOH 57 357 116 HOH HOH A . E 3 HOH 58 358 117 HOH HOH A . E 3 HOH 59 359 118 HOH HOH A . E 3 HOH 60 360 119 HOH HOH A . E 3 HOH 61 361 121 HOH HOH A . E 3 HOH 62 362 122 HOH HOH A . E 3 HOH 63 363 123 HOH HOH A . E 3 HOH 64 364 126 HOH HOH A . E 3 HOH 65 365 127 HOH HOH A . E 3 HOH 66 366 129 HOH HOH A . E 3 HOH 67 367 140 HOH HOH A . E 3 HOH 68 368 143 HOH HOH A . E 3 HOH 69 369 145 HOH HOH A . E 3 HOH 70 370 146 HOH HOH A . E 3 HOH 71 371 148 HOH HOH A . E 3 HOH 72 372 152 HOH HOH A . E 3 HOH 73 373 165 HOH HOH A . E 3 HOH 74 374 166 HOH HOH A . E 3 HOH 75 375 167 HOH HOH A . E 3 HOH 76 376 169 HOH HOH A . E 3 HOH 77 377 170 HOH HOH A . E 3 HOH 78 378 171 HOH HOH A . E 3 HOH 79 379 172 HOH HOH A . E 3 HOH 80 380 174 HOH HOH A . E 3 HOH 81 381 181 HOH HOH A . E 3 HOH 82 382 182 HOH HOH A . E 3 HOH 83 383 183 HOH HOH A . E 3 HOH 84 384 184 HOH HOH A . E 3 HOH 85 385 186 HOH HOH A . E 3 HOH 86 386 191 HOH HOH A . E 3 HOH 87 387 193 HOH HOH A . E 3 HOH 88 388 194 HOH HOH A . E 3 HOH 89 389 197 HOH HOH A . E 3 HOH 90 390 199 HOH HOH A . E 3 HOH 91 391 200 HOH HOH A . E 3 HOH 92 392 201 HOH HOH A . E 3 HOH 93 393 211 HOH HOH A . E 3 HOH 94 394 212 HOH HOH A . E 3 HOH 95 395 214 HOH HOH A . E 3 HOH 96 396 217 HOH HOH A . E 3 HOH 97 397 218 HOH HOH A . E 3 HOH 98 398 220 HOH HOH A . E 3 HOH 99 399 221 HOH HOH A . E 3 HOH 100 400 223 HOH HOH A . E 3 HOH 101 401 224 HOH HOH A . E 3 HOH 102 402 225 HOH HOH A . E 3 HOH 103 403 226 HOH HOH A . E 3 HOH 104 404 227 HOH HOH A . E 3 HOH 105 405 228 HOH HOH A . E 3 HOH 106 406 230 HOH HOH A . E 3 HOH 107 407 233 HOH HOH A . E 3 HOH 108 408 234 HOH HOH A . E 3 HOH 109 409 235 HOH HOH A . E 3 HOH 110 410 237 HOH HOH A . E 3 HOH 111 411 238 HOH HOH A . E 3 HOH 112 412 242 HOH HOH A . E 3 HOH 113 413 244 HOH HOH A . E 3 HOH 114 414 245 HOH HOH A . E 3 HOH 115 415 249 HOH HOH A . E 3 HOH 116 416 250 HOH HOH A . E 3 HOH 117 417 251 HOH HOH A . E 3 HOH 118 418 254 HOH HOH A . E 3 HOH 119 419 257 HOH HOH A . E 3 HOH 120 420 260 HOH HOH A . E 3 HOH 121 421 261 HOH HOH A . E 3 HOH 122 422 266 HOH HOH A . E 3 HOH 123 423 268 HOH HOH A . E 3 HOH 124 424 269 HOH HOH A . E 3 HOH 125 425 270 HOH HOH A . E 3 HOH 126 426 274 HOH HOH A . E 3 HOH 127 427 280 HOH HOH A . E 3 HOH 128 428 282 HOH HOH A . E 3 HOH 129 429 284 HOH HOH A . E 3 HOH 130 430 285 HOH HOH A . E 3 HOH 131 431 288 HOH HOH A . E 3 HOH 132 432 289 HOH HOH A . E 3 HOH 133 433 292 HOH HOH A . E 3 HOH 134 434 294 HOH HOH A . E 3 HOH 135 435 296 HOH HOH A . E 3 HOH 136 436 297 HOH HOH A . E 3 HOH 137 437 302 HOH HOH A . E 3 HOH 138 438 305 HOH HOH A . E 3 HOH 139 439 307 HOH HOH A . E 3 HOH 140 440 309 HOH HOH A . E 3 HOH 141 441 313 HOH HOH A . E 3 HOH 142 442 315 HOH HOH A . E 3 HOH 143 443 316 HOH HOH A . E 3 HOH 144 444 318 HOH HOH A . E 3 HOH 145 445 320 HOH HOH A . E 3 HOH 146 446 328 HOH HOH A . E 3 HOH 147 447 329 HOH HOH A . E 3 HOH 148 448 331 HOH HOH A . E 3 HOH 149 449 341 HOH HOH A . E 3 HOH 150 450 345 HOH HOH A . E 3 HOH 151 451 348 HOH HOH A . E 3 HOH 152 452 350 HOH HOH A . E 3 HOH 153 453 352 HOH HOH A . E 3 HOH 154 454 357 HOH HOH A . E 3 HOH 155 455 359 HOH HOH A . E 3 HOH 156 456 360 HOH HOH A . E 3 HOH 157 457 362 HOH HOH A . E 3 HOH 158 458 366 HOH HOH A . E 3 HOH 159 459 370 HOH HOH A . E 3 HOH 160 460 371 HOH HOH A . E 3 HOH 161 461 379 HOH HOH A . E 3 HOH 162 462 383 HOH HOH A . E 3 HOH 163 463 390 HOH HOH A . E 3 HOH 164 464 391 HOH HOH A . E 3 HOH 165 465 1 HOH HOH A . E 3 HOH 166 466 2 HOH HOH A . E 3 HOH 167 467 3 HOH HOH A . E 3 HOH 168 468 4 HOH HOH A . E 3 HOH 169 469 5 HOH HOH A . F 3 HOH 1 301 2 HOH HOH B . F 3 HOH 2 302 5 HOH HOH B . F 3 HOH 3 303 6 HOH HOH B . F 3 HOH 4 304 7 HOH HOH B . F 3 HOH 5 305 9 HOH HOH B . F 3 HOH 6 306 10 HOH HOH B . F 3 HOH 7 307 12 HOH HOH B . F 3 HOH 8 308 14 HOH HOH B . F 3 HOH 9 309 15 HOH HOH B . F 3 HOH 10 310 16 HOH HOH B . F 3 HOH 11 311 21 HOH HOH B . F 3 HOH 12 312 24 HOH HOH B . F 3 HOH 13 313 26 HOH HOH B . F 3 HOH 14 314 30 HOH HOH B . F 3 HOH 15 315 31 HOH HOH B . F 3 HOH 16 316 35 HOH HOH B . F 3 HOH 17 317 37 HOH HOH B . F 3 HOH 18 318 40 HOH HOH B . F 3 HOH 19 319 42 HOH HOH B . F 3 HOH 20 320 45 HOH HOH B . F 3 HOH 21 321 49 HOH HOH B . F 3 HOH 22 322 52 HOH HOH B . F 3 HOH 23 323 53 HOH HOH B . F 3 HOH 24 324 54 HOH HOH B . F 3 HOH 25 325 55 HOH HOH B . F 3 HOH 26 326 56 HOH HOH B . F 3 HOH 27 327 57 HOH HOH B . F 3 HOH 28 328 59 HOH HOH B . F 3 HOH 29 329 64 HOH HOH B . F 3 HOH 30 330 65 HOH HOH B . F 3 HOH 31 331 69 HOH HOH B . F 3 HOH 32 332 70 HOH HOH B . F 3 HOH 33 333 71 HOH HOH B . F 3 HOH 34 334 74 HOH HOH B . F 3 HOH 35 335 75 HOH HOH B . F 3 HOH 36 336 76 HOH HOH B . F 3 HOH 37 337 77 HOH HOH B . F 3 HOH 38 338 79 HOH HOH B . F 3 HOH 39 339 84 HOH HOH B . F 3 HOH 40 340 86 HOH HOH B . F 3 HOH 41 341 87 HOH HOH B . F 3 HOH 42 342 88 HOH HOH B . F 3 HOH 43 343 89 HOH HOH B . F 3 HOH 44 344 96 HOH HOH B . F 3 HOH 45 345 98 HOH HOH B . F 3 HOH 46 346 99 HOH HOH B . F 3 HOH 47 347 101 HOH HOH B . F 3 HOH 48 348 103 HOH HOH B . F 3 HOH 49 349 105 HOH HOH B . F 3 HOH 50 350 106 HOH HOH B . F 3 HOH 51 351 109 HOH HOH B . F 3 HOH 52 352 110 HOH HOH B . F 3 HOH 53 353 111 HOH HOH B . F 3 HOH 54 354 112 HOH HOH B . F 3 HOH 55 355 114 HOH HOH B . F 3 HOH 56 356 115 HOH HOH B . F 3 HOH 57 357 120 HOH HOH B . F 3 HOH 58 358 124 HOH HOH B . F 3 HOH 59 359 125 HOH HOH B . F 3 HOH 60 360 130 HOH HOH B . F 3 HOH 61 361 132 HOH HOH B . F 3 HOH 62 362 133 HOH HOH B . F 3 HOH 63 363 134 HOH HOH B . F 3 HOH 64 364 135 HOH HOH B . F 3 HOH 65 365 136 HOH HOH B . F 3 HOH 66 366 137 HOH HOH B . F 3 HOH 67 367 138 HOH HOH B . F 3 HOH 68 368 139 HOH HOH B . F 3 HOH 69 369 142 HOH HOH B . F 3 HOH 70 370 144 HOH HOH B . F 3 HOH 71 371 147 HOH HOH B . F 3 HOH 72 372 149 HOH HOH B . F 3 HOH 73 373 150 HOH HOH B . F 3 HOH 74 374 151 HOH HOH B . F 3 HOH 75 375 153 HOH HOH B . F 3 HOH 76 376 155 HOH HOH B . F 3 HOH 77 377 156 HOH HOH B . F 3 HOH 78 378 157 HOH HOH B . F 3 HOH 79 379 158 HOH HOH B . F 3 HOH 80 380 159 HOH HOH B . F 3 HOH 81 381 161 HOH HOH B . F 3 HOH 82 382 162 HOH HOH B . F 3 HOH 83 383 163 HOH HOH B . F 3 HOH 84 384 164 HOH HOH B . F 3 HOH 85 385 168 HOH HOH B . F 3 HOH 86 386 173 HOH HOH B . F 3 HOH 87 387 175 HOH HOH B . F 3 HOH 88 388 176 HOH HOH B . F 3 HOH 89 389 177 HOH HOH B . F 3 HOH 90 390 178 HOH HOH B . F 3 HOH 91 391 187 HOH HOH B . F 3 HOH 92 392 190 HOH HOH B . F 3 HOH 93 393 192 HOH HOH B . F 3 HOH 94 394 196 HOH HOH B . F 3 HOH 95 395 198 HOH HOH B . F 3 HOH 96 396 204 HOH HOH B . F 3 HOH 97 397 205 HOH HOH B . F 3 HOH 98 398 207 HOH HOH B . F 3 HOH 99 399 210 HOH HOH B . F 3 HOH 100 400 215 HOH HOH B . F 3 HOH 101 401 216 HOH HOH B . F 3 HOH 102 402 219 HOH HOH B . F 3 HOH 103 403 222 HOH HOH B . F 3 HOH 104 404 229 HOH HOH B . F 3 HOH 105 405 231 HOH HOH B . F 3 HOH 106 406 232 HOH HOH B . F 3 HOH 107 407 236 HOH HOH B . F 3 HOH 108 408 239 HOH HOH B . F 3 HOH 109 409 240 HOH HOH B . F 3 HOH 110 410 241 HOH HOH B . F 3 HOH 111 411 243 HOH HOH B . F 3 HOH 112 412 246 HOH HOH B . F 3 HOH 113 413 247 HOH HOH B . F 3 HOH 114 414 248 HOH HOH B . F 3 HOH 115 415 252 HOH HOH B . F 3 HOH 116 416 253 HOH HOH B . F 3 HOH 117 417 255 HOH HOH B . F 3 HOH 118 418 256 HOH HOH B . F 3 HOH 119 419 258 HOH HOH B . F 3 HOH 120 420 259 HOH HOH B . F 3 HOH 121 421 262 HOH HOH B . F 3 HOH 122 422 263 HOH HOH B . F 3 HOH 123 423 264 HOH HOH B . F 3 HOH 124 424 265 HOH HOH B . F 3 HOH 125 425 267 HOH HOH B . F 3 HOH 126 426 271 HOH HOH B . F 3 HOH 127 427 272 HOH HOH B . F 3 HOH 128 428 273 HOH HOH B . F 3 HOH 129 429 275 HOH HOH B . F 3 HOH 130 430 276 HOH HOH B . F 3 HOH 131 431 277 HOH HOH B . F 3 HOH 132 432 278 HOH HOH B . F 3 HOH 133 433 279 HOH HOH B . F 3 HOH 134 434 281 HOH HOH B . F 3 HOH 135 435 286 HOH HOH B . F 3 HOH 136 436 287 HOH HOH B . F 3 HOH 137 437 290 HOH HOH B . F 3 HOH 138 438 293 HOH HOH B . F 3 HOH 139 439 298 HOH HOH B . F 3 HOH 140 440 300 HOH HOH B . F 3 HOH 141 441 303 HOH HOH B . F 3 HOH 142 442 310 HOH HOH B . F 3 HOH 143 443 311 HOH HOH B . F 3 HOH 144 444 312 HOH HOH B . F 3 HOH 145 445 314 HOH HOH B . F 3 HOH 146 446 319 HOH HOH B . F 3 HOH 147 447 322 HOH HOH B . F 3 HOH 148 448 323 HOH HOH B . F 3 HOH 149 449 324 HOH HOH B . F 3 HOH 150 450 325 HOH HOH B . F 3 HOH 151 451 326 HOH HOH B . F 3 HOH 152 452 327 HOH HOH B . F 3 HOH 153 453 330 HOH HOH B . F 3 HOH 154 454 332 HOH HOH B . F 3 HOH 155 455 333 HOH HOH B . F 3 HOH 156 456 334 HOH HOH B . F 3 HOH 157 457 335 HOH HOH B . F 3 HOH 158 458 336 HOH HOH B . F 3 HOH 159 459 338 HOH HOH B . F 3 HOH 160 460 339 HOH HOH B . F 3 HOH 161 461 340 HOH HOH B . F 3 HOH 162 462 342 HOH HOH B . F 3 HOH 163 463 343 HOH HOH B . F 3 HOH 164 464 344 HOH HOH B . F 3 HOH 165 465 347 HOH HOH B . F 3 HOH 166 466 351 HOH HOH B . F 3 HOH 167 467 355 HOH HOH B . F 3 HOH 168 468 361 HOH HOH B . F 3 HOH 169 469 363 HOH HOH B . F 3 HOH 170 470 364 HOH HOH B . F 3 HOH 171 471 368 HOH HOH B . F 3 HOH 172 472 369 HOH HOH B . F 3 HOH 173 473 372 HOH HOH B . F 3 HOH 174 474 374 HOH HOH B . F 3 HOH 175 475 375 HOH HOH B . F 3 HOH 176 476 377 HOH HOH B . F 3 HOH 177 477 378 HOH HOH B . F 3 HOH 178 478 380 HOH HOH B . F 3 HOH 179 479 381 HOH HOH B . F 3 HOH 180 480 386 HOH HOH B . F 3 HOH 181 481 389 HOH HOH B . F 3 HOH 182 482 6 HOH HOH B . F 3 HOH 183 483 7 HOH HOH B . F 3 HOH 184 484 8 HOH HOH B . F 3 HOH 185 485 9 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-26 2 'Structure model' 1 1 2018-01-24 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Structure summary' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' audit_author 2 2 'Structure model' pdbx_unobs_or_zero_occ_atoms 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model 7 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 8 3 'Structure model' struct_conn 9 3 'Structure model' struct_ref_seq_dif 10 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_audit_author.name' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_struct_conn.pdbx_dist_value' 5 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 8 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 9 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 10 3 'Structure model' '_struct_ref_seq_dif.details' 11 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 12 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 13 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 367 ? ? O A HOH 461 ? ? 1.62 2 1 O A GLY 112 ? ? O A HOH 401 ? ? 1.63 3 1 O A HOH 412 ? ? O A HOH 460 ? ? 1.75 4 1 O B HOH 340 ? ? O B HOH 423 ? ? 1.82 5 1 O B HOH 404 ? ? O B HOH 459 ? ? 1.85 6 1 O B HOH 357 ? ? O B HOH 463 ? ? 1.97 7 1 O A ASP 26 ? ? O A HOH 455 ? ? 2.03 8 1 OH A TYR 60 ? ? O A HOH 461 ? ? 2.04 9 1 OE1 A GLU 17 ? ? O A HOH 417 ? ? 2.10 10 1 O B HOH 369 ? ? O B HOH 473 ? ? 2.10 11 1 O A HOH 432 ? ? O A HOH 454 ? ? 2.10 12 1 O B HOH 421 ? ? O B HOH 427 ? ? 2.12 13 1 OH B TYR 60 ? ? O B HOH 459 ? ? 2.13 14 1 O A HOH 306 ? ? O A HOH 424 ? ? 2.14 15 1 CD B GLU 111 ? ? O B HOH 477 ? ? 2.14 16 1 O A HOH 405 ? ? O A HOH 424 ? ? 2.15 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 C A LYS 133 ? ? 1_555 O A HOH 437 ? ? 1_545 1.35 2 1 C B LYS 133 ? ? 1_555 O B HOH 368 ? ? 1_645 1.53 3 1 NZ A LYS 21 ? ? 1_555 O A HOH 469 ? ? 1_565 1.75 4 1 O A HOH 462 ? ? 1_555 O B HOH 381 ? ? 1_556 1.93 5 1 O A HOH 442 ? ? 1_555 O B HOH 430 ? ? 1_556 2.01 6 1 CE A LYS 132 ? ? 1_555 O A HOH 389 ? ? 1_545 2.05 7 1 O B HOH 441 ? ? 1_555 O B HOH 444 ? ? 1_455 2.15 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CZ A ARG 2 ? ? NH2 A ARG 2 ? ? 1.406 1.326 0.080 0.013 N 2 1 CB B GLU 11 ? ? CG B GLU 11 ? ? 1.362 1.517 -0.155 0.019 N 3 1 CE3 B TRP 88 ? ? CZ3 B TRP 88 ? ? 1.482 1.380 0.102 0.017 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A PHE 16 ? ? CG A PHE 16 ? ? CD2 A PHE 16 ? ? 116.60 120.80 -4.20 0.70 N 2 1 NE A ARG 30 ? ? CZ A ARG 30 ? ? NH1 A ARG 30 ? ? 130.84 120.30 10.54 0.50 N 3 1 NE A ARG 30 ? ? CZ A ARG 30 ? ? NH2 A ARG 30 ? ? 107.37 120.30 -12.93 0.50 N 4 1 CB A ASP 47 ? ? CG A ASP 47 ? ? OD2 A ASP 47 ? ? 125.53 118.30 7.23 0.90 N 5 1 NE A ARG 104 ? ? CZ A ARG 104 ? ? NH1 A ARG 104 ? ? 124.38 120.30 4.08 0.50 N 6 1 NE B ARG 30 ? ? CZ B ARG 30 ? ? NH2 B ARG 30 ? ? 115.30 120.30 -5.00 0.50 N 7 1 CB B ASP 47 ? ? CG B ASP 47 ? ? OD2 B ASP 47 ? ? 124.33 118.30 6.03 0.90 N 8 1 OE1 B GLU 69 ? ? CD B GLU 69 ? ? OE2 B GLU 69 ? ? 131.09 123.30 7.79 1.20 N 9 1 CB B ASP 71 ? ? CG B ASP 71 ? ? OD1 B ASP 71 ? ? 124.55 118.30 6.25 0.90 N 10 1 CZ B TYR 73 ? ? CE2 B TYR 73 ? ? CD2 B TYR 73 ? ? 114.11 119.80 -5.69 0.90 N 11 1 CB B ASP 123 ? ? CG B ASP 123 ? ? OD1 B ASP 123 ? ? 124.90 118.30 6.60 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 77 ? ? -113.65 -107.61 2 1 TRP B 58 ? ? -168.38 113.37 3 1 LEU B 77 ? ? -108.50 -110.16 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 PHE _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 57 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 TRP _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 58 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -139.59 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 113 ? CG ? A ASP 113 CG 2 1 Y 1 A ASP 113 ? OD1 ? A ASP 113 OD1 3 1 Y 1 A ASP 113 ? OD2 ? A ASP 113 OD2 4 1 Y 0 B SER 12 ? N A B SER 12 N 5 1 Y 0 B SER 12 ? CA A B SER 12 CA 6 1 Y 0 B SER 12 ? C A B SER 12 C 7 1 Y 0 B SER 12 ? O A B SER 12 O 8 1 Y 0 B SER 12 ? CB A B SER 12 CB 9 1 Y 0 B SER 12 ? OG A B SER 12 OG # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 RET C1 C N N 273 RET C2 C N N 274 RET C3 C N N 275 RET C4 C N N 276 RET C5 C N N 277 RET C6 C N N 278 RET C7 C N N 279 RET C8 C N N 280 RET C9 C N N 281 RET C10 C N N 282 RET C11 C N N 283 RET C12 C N N 284 RET C13 C N N 285 RET C14 C N N 286 RET C15 C N N 287 RET O1 O N N 288 RET C16 C N N 289 RET C17 C N N 290 RET C18 C N N 291 RET C19 C N N 292 RET C20 C N N 293 RET H21 H N N 294 RET H22 H N N 295 RET H31 H N N 296 RET H32 H N N 297 RET H41 H N N 298 RET H42 H N N 299 RET H7 H N N 300 RET H8 H N N 301 RET H10 H N N 302 RET H11 H N N 303 RET H12 H N N 304 RET H14 H N N 305 RET H15 H N N 306 RET H161 H N N 307 RET H162 H N N 308 RET H163 H N N 309 RET H171 H N N 310 RET H172 H N N 311 RET H173 H N N 312 RET H181 H N N 313 RET H182 H N N 314 RET H183 H N N 315 RET H191 H N N 316 RET H192 H N N 317 RET H193 H N N 318 RET H201 H N N 319 RET H202 H N N 320 RET H203 H N N 321 SER N N N N 322 SER CA C N S 323 SER C C N N 324 SER O O N N 325 SER CB C N N 326 SER OG O N N 327 SER OXT O N N 328 SER H H N N 329 SER H2 H N N 330 SER HA H N N 331 SER HB2 H N N 332 SER HB3 H N N 333 SER HG H N N 334 SER HXT H N N 335 THR N N N N 336 THR CA C N S 337 THR C C N N 338 THR O O N N 339 THR CB C N R 340 THR OG1 O N N 341 THR CG2 C N N 342 THR OXT O N N 343 THR H H N N 344 THR H2 H N N 345 THR HA H N N 346 THR HB H N N 347 THR HG1 H N N 348 THR HG21 H N N 349 THR HG22 H N N 350 THR HG23 H N N 351 THR HXT H N N 352 TRP N N N N 353 TRP CA C N S 354 TRP C C N N 355 TRP O O N N 356 TRP CB C N N 357 TRP CG C Y N 358 TRP CD1 C Y N 359 TRP CD2 C Y N 360 TRP NE1 N Y N 361 TRP CE2 C Y N 362 TRP CE3 C Y N 363 TRP CZ2 C Y N 364 TRP CZ3 C Y N 365 TRP CH2 C Y N 366 TRP OXT O N N 367 TRP H H N N 368 TRP H2 H N N 369 TRP HA H N N 370 TRP HB2 H N N 371 TRP HB3 H N N 372 TRP HD1 H N N 373 TRP HE1 H N N 374 TRP HE3 H N N 375 TRP HZ2 H N N 376 TRP HZ3 H N N 377 TRP HH2 H N N 378 TRP HXT H N N 379 TYR N N N N 380 TYR CA C N S 381 TYR C C N N 382 TYR O O N N 383 TYR CB C N N 384 TYR CG C Y N 385 TYR CD1 C Y N 386 TYR CD2 C Y N 387 TYR CE1 C Y N 388 TYR CE2 C Y N 389 TYR CZ C Y N 390 TYR OH O N N 391 TYR OXT O N N 392 TYR H H N N 393 TYR H2 H N N 394 TYR HA H N N 395 TYR HB2 H N N 396 TYR HB3 H N N 397 TYR HD1 H N N 398 TYR HD2 H N N 399 TYR HE1 H N N 400 TYR HE2 H N N 401 TYR HH H N N 402 TYR HXT H N N 403 VAL N N N N 404 VAL CA C N S 405 VAL C C N N 406 VAL O O N N 407 VAL CB C N N 408 VAL CG1 C N N 409 VAL CG2 C N N 410 VAL OXT O N N 411 VAL H H N N 412 VAL H2 H N N 413 VAL HA H N N 414 VAL HB H N N 415 VAL HG11 H N N 416 VAL HG12 H N N 417 VAL HG13 H N N 418 VAL HG21 H N N 419 VAL HG22 H N N 420 VAL HG23 H N N 421 VAL HXT H N N 422 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 RET C1 C2 sing N N 260 RET C1 C6 sing N N 261 RET C1 C16 sing N N 262 RET C1 C17 sing N N 263 RET C2 C3 sing N N 264 RET C2 H21 sing N N 265 RET C2 H22 sing N N 266 RET C3 C4 sing N N 267 RET C3 H31 sing N N 268 RET C3 H32 sing N N 269 RET C4 C5 sing N N 270 RET C4 H41 sing N N 271 RET C4 H42 sing N N 272 RET C5 C6 doub N N 273 RET C5 C18 sing N N 274 RET C6 C7 sing N N 275 RET C7 C8 doub N E 276 RET C7 H7 sing N N 277 RET C8 C9 sing N N 278 RET C8 H8 sing N N 279 RET C9 C10 doub N E 280 RET C9 C19 sing N N 281 RET C10 C11 sing N N 282 RET C10 H10 sing N N 283 RET C11 C12 doub N E 284 RET C11 H11 sing N N 285 RET C12 C13 sing N N 286 RET C12 H12 sing N N 287 RET C13 C14 doub N E 288 RET C13 C20 sing N N 289 RET C14 C15 sing N N 290 RET C14 H14 sing N N 291 RET C15 O1 doub N N 292 RET C15 H15 sing N N 293 RET C16 H161 sing N N 294 RET C16 H162 sing N N 295 RET C16 H163 sing N N 296 RET C17 H171 sing N N 297 RET C17 H172 sing N N 298 RET C17 H173 sing N N 299 RET C18 H181 sing N N 300 RET C18 H182 sing N N 301 RET C18 H183 sing N N 302 RET C19 H191 sing N N 303 RET C19 H192 sing N N 304 RET C19 H193 sing N N 305 RET C20 H201 sing N N 306 RET C20 H202 sing N N 307 RET C20 H203 sing N N 308 SER N CA sing N N 309 SER N H sing N N 310 SER N H2 sing N N 311 SER CA C sing N N 312 SER CA CB sing N N 313 SER CA HA sing N N 314 SER C O doub N N 315 SER C OXT sing N N 316 SER CB OG sing N N 317 SER CB HB2 sing N N 318 SER CB HB3 sing N N 319 SER OG HG sing N N 320 SER OXT HXT sing N N 321 THR N CA sing N N 322 THR N H sing N N 323 THR N H2 sing N N 324 THR CA C sing N N 325 THR CA CB sing N N 326 THR CA HA sing N N 327 THR C O doub N N 328 THR C OXT sing N N 329 THR CB OG1 sing N N 330 THR CB CG2 sing N N 331 THR CB HB sing N N 332 THR OG1 HG1 sing N N 333 THR CG2 HG21 sing N N 334 THR CG2 HG22 sing N N 335 THR CG2 HG23 sing N N 336 THR OXT HXT sing N N 337 TRP N CA sing N N 338 TRP N H sing N N 339 TRP N H2 sing N N 340 TRP CA C sing N N 341 TRP CA CB sing N N 342 TRP CA HA sing N N 343 TRP C O doub N N 344 TRP C OXT sing N N 345 TRP CB CG sing N N 346 TRP CB HB2 sing N N 347 TRP CB HB3 sing N N 348 TRP CG CD1 doub Y N 349 TRP CG CD2 sing Y N 350 TRP CD1 NE1 sing Y N 351 TRP CD1 HD1 sing N N 352 TRP CD2 CE2 doub Y N 353 TRP CD2 CE3 sing Y N 354 TRP NE1 CE2 sing Y N 355 TRP NE1 HE1 sing N N 356 TRP CE2 CZ2 sing Y N 357 TRP CE3 CZ3 doub Y N 358 TRP CE3 HE3 sing N N 359 TRP CZ2 CH2 doub Y N 360 TRP CZ2 HZ2 sing N N 361 TRP CZ3 CH2 sing Y N 362 TRP CZ3 HZ3 sing N N 363 TRP CH2 HH2 sing N N 364 TRP OXT HXT sing N N 365 TYR N CA sing N N 366 TYR N H sing N N 367 TYR N H2 sing N N 368 TYR CA C sing N N 369 TYR CA CB sing N N 370 TYR CA HA sing N N 371 TYR C O doub N N 372 TYR C OXT sing N N 373 TYR CB CG sing N N 374 TYR CB HB2 sing N N 375 TYR CB HB3 sing N N 376 TYR CG CD1 doub Y N 377 TYR CG CD2 sing Y N 378 TYR CD1 CE1 sing Y N 379 TYR CD1 HD1 sing N N 380 TYR CD2 CE2 doub Y N 381 TYR CD2 HD2 sing N N 382 TYR CE1 CZ doub Y N 383 TYR CE1 HE1 sing N N 384 TYR CE2 CZ sing Y N 385 TYR CE2 HE2 sing N N 386 TYR CZ OH sing N N 387 TYR OH HH sing N N 388 TYR OXT HXT sing N N 389 VAL N CA sing N N 390 VAL N H sing N N 391 VAL N H2 sing N N 392 VAL CA C sing N N 393 VAL CA CB sing N N 394 VAL CA HA sing N N 395 VAL C O doub N N 396 VAL C OXT sing N N 397 VAL CB CG1 sing N N 398 VAL CB CG2 sing N N 399 VAL CB HB sing N N 400 VAL CG1 HG11 sing N N 401 VAL CG1 HG12 sing N N 402 VAL CG1 HG13 sing N N 403 VAL CG2 HG21 sing N N 404 VAL CG2 HG22 sing N N 405 VAL CG2 HG23 sing N N 406 VAL OXT HXT sing N N 407 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RETINAL RET 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2RCQ _pdbx_initial_refinement_model.details ? #