data_4GS9 # _entry.id 4GS9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4GS9 pdb_00004gs9 10.2210/pdb4gs9/pdb RCSB RCSB074572 ? ? WWPDB D_1000074572 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4GHI 'Ternary complex of ligand JN-128-022 with an enhanced affinity HIF2 PAS-B heterodimer' unspecified PDB 3H7W 'Ternary complex of ligand THS-017 with an enhanced affinity HIF2 PAS-B heterodimer' unspecified PDB 3H82 'Ternary complex of ligand THS-020 with an enhanced affinity HIF2 PAS-B heterodimer' unspecified PDB 3F1O 'Ternary complex of ligand THS-044 with an enhanced affinity HIF2 PAS-B heterodimer' unspecified PDB 3F1N 'Ternary complex of cryosolvent with an enhanced affinity HIF2 PAS-B heterodimer' unspecified PDB 3F1P 'Crystal structure of an enhanced affinity HIF2 PAS-B heterodimer, unliganded.' unspecified PDB 2A24 'NMR-guided model of the wt HIF2 PAS-B heterodimer' unspecified PDB 1P97 'NMR structure of the HIF2alpha PAS-B domain.' unspecified PDB 1X0O 'NMR structure of the ARNT PAS-B domain.' unspecified PDB 2B02 'Crystal structure of the ARNT PAS-B domain' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4GS9 _pdbx_database_status.recvd_initial_deposition_date 2012-08-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Scheuermann, T.H.' 1 'Gardner, K.H.' 2 # _citation.id primary _citation.title 'Development of Inhibitors of the PAS-B Domain of the HIF-2 alpha Transcription Factor' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 56 _citation.page_first 1739 _citation.page_last 1747 _citation.year 2013 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23363003 _citation.pdbx_database_id_DOI 10.1021/jm301847z # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rogers, J.L.' 1 ? primary 'Bayeh, L.' 2 ? primary 'Scheuermann, T.H.' 3 ? primary 'Longgood, J.' 4 ? primary 'Key, J.' 5 ? primary 'Naidoo, J.' 6 ? primary 'Melito, L.' 7 ? primary 'Shokri, C.' 8 ? primary 'Frantz, D.E.' 9 ? primary 'Bruick, R.K.' 10 ? primary 'Gardner, K.H.' 11 ? primary 'Macmillan, J.B.' 12 ? primary 'Tambar, U.K.' 13 ? # _cell.entry_id 4GS9 _cell.length_a 72.745 _cell.length_b 83.054 _cell.length_c 41.075 _cell.angle_alpha 90.00 _cell.angle_beta 105.78 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4GS9 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Endothelial PAS domain-containing protein 1' 13538.300 1 ? R247E 'HIF2 PAS-B domain, UNP residues 239-350' ? 2 polymer man 'Aryl hydrocarbon receptor nuclear translocator' 14243.098 1 ? E362R 'ARNT PAS-B domain, UNP residues 356-470' ? 3 non-polymer syn 'N-(3-fluorophenyl)-4-nitro-2,1,3-benzoxadiazol-5-amine' 274.207 1 ? ? ? ? 4 non-polymer syn 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL 370.436 1 ? ? ? ? 5 water nat water 18.015 121 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;EPAS-1, Basic-helix-loop-helix-PAS protein MOP2, Class E basic helix-loop-helix protein 73, bHLHe73, HIF-1-alpha-like factor, HLF, Hypoxia-inducible factor 2-alpha, HIF-2-alpha, HIF2-alpha, Member of PAS protein 2, PAS domain-containing protein 2 ; 2 ;ARNT protein, Class E basic helix-loop-helix protein 2, bHLHe2, Dioxin receptor, nuclear translocator, Hypoxia-inducible factor 1-beta, HIF-1-beta, HIF1-beta ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GEFKGLDSKTFLSEHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKH GGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKN ; ;GEFKGLDSKTFLSEHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKH GGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKN ; A ? 2 'polypeptide(L)' no no ;GEFKGLNVCQPTRFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRF RSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQE ; ;GEFKGLNVCQPTRFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRF RSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQE ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLU n 1 3 PHE n 1 4 LYS n 1 5 GLY n 1 6 LEU n 1 7 ASP n 1 8 SER n 1 9 LYS n 1 10 THR n 1 11 PHE n 1 12 LEU n 1 13 SER n 1 14 GLU n 1 15 HIS n 1 16 SER n 1 17 MET n 1 18 ASP n 1 19 MET n 1 20 LYS n 1 21 PHE n 1 22 THR n 1 23 TYR n 1 24 CYS n 1 25 ASP n 1 26 ASP n 1 27 ARG n 1 28 ILE n 1 29 THR n 1 30 GLU n 1 31 LEU n 1 32 ILE n 1 33 GLY n 1 34 TYR n 1 35 HIS n 1 36 PRO n 1 37 GLU n 1 38 GLU n 1 39 LEU n 1 40 LEU n 1 41 GLY n 1 42 ARG n 1 43 SER n 1 44 ALA n 1 45 TYR n 1 46 GLU n 1 47 PHE n 1 48 TYR n 1 49 HIS n 1 50 ALA n 1 51 LEU n 1 52 ASP n 1 53 SER n 1 54 GLU n 1 55 ASN n 1 56 MET n 1 57 THR n 1 58 LYS n 1 59 SER n 1 60 HIS n 1 61 GLN n 1 62 ASN n 1 63 LEU n 1 64 CYS n 1 65 THR n 1 66 LYS n 1 67 GLY n 1 68 GLN n 1 69 VAL n 1 70 VAL n 1 71 SER n 1 72 GLY n 1 73 GLN n 1 74 TYR n 1 75 ARG n 1 76 MET n 1 77 LEU n 1 78 ALA n 1 79 LYS n 1 80 HIS n 1 81 GLY n 1 82 GLY n 1 83 TYR n 1 84 VAL n 1 85 TRP n 1 86 LEU n 1 87 GLU n 1 88 THR n 1 89 GLN n 1 90 GLY n 1 91 THR n 1 92 VAL n 1 93 ILE n 1 94 TYR n 1 95 ASN n 1 96 PRO n 1 97 ARG n 1 98 ASN n 1 99 LEU n 1 100 GLN n 1 101 PRO n 1 102 GLN n 1 103 CYS n 1 104 ILE n 1 105 MET n 1 106 CYS n 1 107 VAL n 1 108 ASN n 1 109 TYR n 1 110 VAL n 1 111 LEU n 1 112 SER n 1 113 GLU n 1 114 ILE n 1 115 GLU n 1 116 LYS n 1 117 ASN n 2 1 GLY n 2 2 GLU n 2 3 PHE n 2 4 LYS n 2 5 GLY n 2 6 LEU n 2 7 ASN n 2 8 VAL n 2 9 CYS n 2 10 GLN n 2 11 PRO n 2 12 THR n 2 13 ARG n 2 14 PHE n 2 15 ILE n 2 16 SER n 2 17 ARG n 2 18 HIS n 2 19 ASN n 2 20 ILE n 2 21 GLU n 2 22 GLY n 2 23 ILE n 2 24 PHE n 2 25 THR n 2 26 PHE n 2 27 VAL n 2 28 ASP n 2 29 HIS n 2 30 ARG n 2 31 CYS n 2 32 VAL n 2 33 ALA n 2 34 THR n 2 35 VAL n 2 36 GLY n 2 37 TYR n 2 38 GLN n 2 39 PRO n 2 40 GLN n 2 41 GLU n 2 42 LEU n 2 43 LEU n 2 44 GLY n 2 45 LYS n 2 46 ASN n 2 47 ILE n 2 48 VAL n 2 49 GLU n 2 50 PHE n 2 51 CYS n 2 52 HIS n 2 53 PRO n 2 54 GLU n 2 55 ASP n 2 56 GLN n 2 57 GLN n 2 58 LEU n 2 59 LEU n 2 60 ARG n 2 61 ASP n 2 62 SER n 2 63 PHE n 2 64 GLN n 2 65 GLN n 2 66 VAL n 2 67 VAL n 2 68 LYS n 2 69 LEU n 2 70 LYS n 2 71 GLY n 2 72 GLN n 2 73 VAL n 2 74 LEU n 2 75 SER n 2 76 VAL n 2 77 MET n 2 78 PHE n 2 79 ARG n 2 80 PHE n 2 81 ARG n 2 82 SER n 2 83 LYS n 2 84 ASN n 2 85 GLN n 2 86 GLU n 2 87 TRP n 2 88 LEU n 2 89 TRP n 2 90 MET n 2 91 ARG n 2 92 THR n 2 93 SER n 2 94 SER n 2 95 PHE n 2 96 THR n 2 97 PHE n 2 98 GLN n 2 99 ASN n 2 100 PRO n 2 101 TYR n 2 102 SER n 2 103 ASP n 2 104 GLU n 2 105 ILE n 2 106 GLU n 2 107 TYR n 2 108 ILE n 2 109 ILE n 2 110 CYS n 2 111 THR n 2 112 ASN n 2 113 THR n 2 114 ASN n 2 115 VAL n 2 116 LYS n 2 117 ASN n 2 118 SER n 2 119 SER n 2 120 GLN n 2 121 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? 'BHLHE73, EPAS1, HIF2, HIF2A, MOP2, PASD2' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3) CondonPlus' ? ? ? ? ? ? ? plasmid ? ? ? pHIS-GB1 ? ? 2 1 sample ? ? ? human ? 'ARNT, BHLHE2' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3) CondonPlus' ? ? ? ? ? ? ? plasmid ? ? ? pHIS-GB1 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP EPAS1_HUMAN Q99814 1 ;LDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVW LETQGTVIYNPRNLQPQCIMCVNYVLSEIEKN ; 239 ? 2 UNP ARNT_HUMAN P27540 2 ;NVCQPTEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNQE WLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQE ; 356 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4GS9 A 6 ? 117 ? Q99814 239 ? 350 ? 239 350 2 2 4GS9 B 7 ? 121 ? P27540 356 ? 470 ? 356 470 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4GS9 GLY A 1 ? UNP Q99814 ? ? 'expression tag' -2 1 1 4GS9 GLU A 2 ? UNP Q99814 ? ? 'expression tag' -1 2 1 4GS9 PHE A 3 ? UNP Q99814 ? ? 'expression tag' 0 3 1 4GS9 LYS A 4 ? UNP Q99814 ? ? 'expression tag' 1 4 1 4GS9 GLY A 5 ? UNP Q99814 ? ? 'expression tag' 2 5 1 4GS9 GLU A 14 ? UNP Q99814 ARG 247 'engineered mutation' 247 6 2 4GS9 GLY B 1 ? UNP P27540 ? ? 'expression tag' 350 7 2 4GS9 GLU B 2 ? UNP P27540 ? ? 'expression tag' 351 8 2 4GS9 PHE B 3 ? UNP P27540 ? ? 'expression tag' 352 9 2 4GS9 LYS B 4 ? UNP P27540 ? ? 'expression tag' 353 10 2 4GS9 GLY B 5 ? UNP P27540 ? ? 'expression tag' 354 11 2 4GS9 LEU B 6 ? UNP P27540 ? ? 'expression tag' 355 12 2 4GS9 ARG B 13 ? UNP P27540 GLU 362 'engineered mutation' 362 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0XB non-polymer . 'N-(3-fluorophenyl)-4-nitro-2,1,3-benzoxadiazol-5-amine' ? 'C12 H7 F N4 O3' 274.207 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PE8 non-polymer . 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL ? 'C16 H34 O9' 370.436 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4GS9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_percent_sol 42.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;20% PEG 3350 50 mM BISTRIS, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-10-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator CUSTOM _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9717767 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength 0.9717767 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4GS9 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.720 _reflns.number_obs 24715 _reflns.number_all ? _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs 0.03600 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 36.2000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.400 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.72 _reflns_shell.d_res_low 1.75 _reflns_shell.percent_possible_all 98.5 _reflns_shell.Rmerge_I_obs 0.28200 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.300 _reflns_shell.pdbx_redundancy 3.40 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4GS9 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 24715 _refine.ls_number_reflns_all 24724 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.370 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.67 _refine.ls_d_res_high 1.72 _refine.ls_percent_reflns_obs 99.1 _refine.ls_R_factor_obs 0.175 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.174 _refine.ls_R_factor_R_free 0.202 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.170 _refine.ls_number_reflns_R_free 1279 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 2.91110 _refine.aniso_B[2][2] -3.07530 _refine.aniso_B[3][3] 0.16430 _refine.aniso_B[1][2] -0.00000 _refine.aniso_B[1][3] -0.31060 _refine.aniso_B[2][3] -0.00000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.41 _refine.solvent_model_param_bsol 55.33 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.73 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 3F1P _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.240 _refine.pdbx_overall_phase_error 20.150 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1773 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 121 _refine_hist.number_atoms_total 1939 _refine_hist.d_res_high 1.72 _refine_hist.d_res_low 30.67 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 2012 'X-RAY DIFFRACTION' ? f_angle_d 1.196 ? ? 2724 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 17.282 ? ? 761 'X-RAY DIFFRACTION' ? f_chiral_restr 0.076 ? ? 281 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 349 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.7205 1.7893 2499 0.2350 97.00 0.3122 . . 170 . . . . 'X-RAY DIFFRACTION' . 1.7893 1.8708 2594 0.2097 99.00 0.2483 . . 135 . . . . 'X-RAY DIFFRACTION' . 1.8708 1.9694 2615 0.1810 99.00 0.2370 . . 151 . . . . 'X-RAY DIFFRACTION' . 1.9694 2.0927 2607 0.1637 100.00 0.1956 . . 122 . . . . 'X-RAY DIFFRACTION' . 2.0927 2.2543 2600 0.1657 100.00 0.1921 . . 142 . . . . 'X-RAY DIFFRACTION' . 2.2543 2.4810 2630 0.1622 100.00 0.1959 . . 125 . . . . 'X-RAY DIFFRACTION' . 2.4810 2.8398 2637 0.1713 100.00 0.2073 . . 143 . . . . 'X-RAY DIFFRACTION' . 2.8398 3.5770 2614 0.1624 100.00 0.1781 . . 156 . . . . 'X-RAY DIFFRACTION' . 3.5770 30.6740 2640 0.1775 98.00 0.1972 . . 135 . . . . # _struct.entry_id 4GS9 _struct.title ;Crystal structure of the high affinity heterodimer of HIF2 alpha and ARNT C-terminal PAS domains in complex with an inactive benzoxadiazole antagonist ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4GS9 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'PAS fold, Transcription, protein-protein interactions, nucleus' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 6 ? SER A 8 ? LEU A 239 SER A 241 5 ? 3 HELX_P HELX_P2 2 ASP A 26 ? GLY A 33 ? ASP A 259 GLY A 266 1 ? 8 HELX_P HELX_P3 3 HIS A 35 ? LEU A 40 ? HIS A 268 LEU A 273 1 ? 6 HELX_P HELX_P4 4 SER A 43 ? TYR A 48 ? SER A 276 TYR A 281 5 ? 6 HELX_P HELX_P5 6 ASP A 52 ? GLY A 67 ? ASP A 285 GLY A 300 1 ? 16 HELX_P HELX_P6 7 ARG B 30 ? GLY B 36 ? ARG B 379 GLY B 385 1 ? 7 HELX_P HELX_P7 8 GLN B 38 ? LEU B 42 ? GLN B 387 LEU B 391 5 ? 5 HELX_P HELX_P8 9 ASN B 46 ? CYS B 51 ? ASN B 395 CYS B 400 5 ? 6 HELX_P HELX_P9 10 ASP B 55 ? VAL B 67 ? ASP B 404 VAL B 416 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 21 ? CYS A 24 ? PHE A 254 CYS A 257 A 2 THR A 10 ? HIS A 15 ? THR A 243 HIS A 248 A 3 CYS A 103 ? VAL A 110 ? CYS A 336 VAL A 343 A 4 TYR A 83 ? ILE A 93 ? TYR A 316 ILE A 326 A 5 GLN A 68 ? VAL A 70 ? GLN A 301 VAL A 303 B 1 PHE A 21 ? CYS A 24 ? PHE A 254 CYS A 257 B 2 THR A 10 ? HIS A 15 ? THR A 243 HIS A 248 B 3 CYS A 103 ? VAL A 110 ? CYS A 336 VAL A 343 B 4 TYR A 83 ? ILE A 93 ? TYR A 316 ILE A 326 B 5 TYR A 74 ? LEU A 77 ? TYR A 307 LEU A 310 C 1 PHE B 24 ? VAL B 27 ? PHE B 373 VAL B 376 C 2 ARG B 13 ? HIS B 18 ? ARG B 362 HIS B 367 C 3 TYR B 107 ? ASN B 114 ? TYR B 456 ASN B 463 C 4 TRP B 87 ? PHE B 97 ? TRP B 436 PHE B 446 C 5 LEU B 74 ? ARG B 81 ? LEU B 423 ARG B 430 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 22 ? O THR A 255 N GLU A 14 ? N GLU A 247 A 2 3 N SER A 13 ? N SER A 246 O CYS A 106 ? O CYS A 339 A 3 4 O CYS A 103 ? O CYS A 336 N ILE A 93 ? N ILE A 326 A 4 5 O GLY A 90 ? O GLY A 323 N VAL A 69 ? N VAL A 302 B 1 2 O THR A 22 ? O THR A 255 N GLU A 14 ? N GLU A 247 B 2 3 N SER A 13 ? N SER A 246 O CYS A 106 ? O CYS A 339 B 3 4 O CYS A 103 ? O CYS A 336 N ILE A 93 ? N ILE A 326 B 4 5 O LEU A 86 ? O LEU A 319 N TYR A 74 ? N TYR A 307 C 1 2 O THR B 25 ? O THR B 374 N ARG B 17 ? N ARG B 366 C 2 3 N SER B 16 ? N SER B 365 O CYS B 110 ? O CYS B 459 C 3 4 O THR B 113 ? O THR B 462 N ARG B 91 ? N ARG B 440 C 4 5 O MET B 90 ? O MET B 439 N PHE B 78 ? N PHE B 427 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 0XB 401 ? 12 'BINDING SITE FOR RESIDUE 0XB A 401' AC2 Software A PE8 402 ? 9 'BINDING SITE FOR RESIDUE PE8 A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 SER A 13 ? SER A 246 . ? 1_555 ? 2 AC1 12 HIS A 15 ? HIS A 248 . ? 1_555 ? 3 AC1 12 MET A 19 ? MET A 252 . ? 1_555 ? 4 AC1 12 ALA A 44 ? ALA A 277 . ? 1_555 ? 5 AC1 12 TYR A 48 ? TYR A 281 . ? 1_555 ? 6 AC1 12 MET A 56 ? MET A 289 . ? 1_555 ? 7 AC1 12 SER A 59 ? SER A 292 . ? 1_555 ? 8 AC1 12 HIS A 60 ? HIS A 293 . ? 1_555 ? 9 AC1 12 TYR A 74 ? TYR A 307 . ? 1_555 ? 10 AC1 12 MET A 76 ? MET A 309 . ? 1_555 ? 11 AC1 12 THR A 88 ? THR A 321 . ? 1_555 ? 12 AC1 12 ASN A 108 ? ASN A 341 . ? 1_555 ? 13 AC2 9 TYR A 45 ? TYR A 278 . ? 1_555 ? 14 AC2 9 THR A 57 ? THR A 290 . ? 1_555 ? 15 AC2 9 HIS A 60 ? HIS A 293 . ? 1_555 ? 16 AC2 9 GLN A 61 ? GLN A 294 . ? 1_555 ? 17 AC2 9 THR A 65 ? THR A 298 . ? 1_555 ? 18 AC2 9 TYR B 37 ? TYR B 386 . ? 4_556 ? 19 AC2 9 GLU B 41 ? GLU B 390 . ? 4_556 ? 20 AC2 9 LYS B 45 ? LYS B 394 . ? 4_556 ? 21 AC2 9 GLU B 49 ? GLU B 398 . ? 4_556 ? # _database_PDB_matrix.entry_id 4GS9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4GS9 _atom_sites.fract_transf_matrix[1][1] 0.013747 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003885 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012040 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025299 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 GLU 2 -1 ? ? ? A . n A 1 3 PHE 3 0 0 PHE PHE A . n A 1 4 LYS 4 1 1 LYS LYS A . n A 1 5 GLY 5 2 2 GLY GLY A . n A 1 6 LEU 6 239 239 LEU LEU A . n A 1 7 ASP 7 240 240 ASP ASP A . n A 1 8 SER 8 241 241 SER SER A . n A 1 9 LYS 9 242 242 LYS LYS A . n A 1 10 THR 10 243 243 THR THR A . n A 1 11 PHE 11 244 244 PHE PHE A . n A 1 12 LEU 12 245 245 LEU LEU A . n A 1 13 SER 13 246 246 SER SER A . n A 1 14 GLU 14 247 247 GLU GLU A . n A 1 15 HIS 15 248 248 HIS HIS A . n A 1 16 SER 16 249 249 SER SER A . n A 1 17 MET 17 250 250 MET MET A . n A 1 18 ASP 18 251 251 ASP ASP A . n A 1 19 MET 19 252 252 MET MET A . n A 1 20 LYS 20 253 253 LYS LYS A . n A 1 21 PHE 21 254 254 PHE PHE A . n A 1 22 THR 22 255 255 THR THR A . n A 1 23 TYR 23 256 256 TYR TYR A . n A 1 24 CYS 24 257 257 CYS CYS A . n A 1 25 ASP 25 258 258 ASP ASP A . n A 1 26 ASP 26 259 259 ASP ASP A . n A 1 27 ARG 27 260 260 ARG ARG A . n A 1 28 ILE 28 261 261 ILE ILE A . n A 1 29 THR 29 262 262 THR THR A . n A 1 30 GLU 30 263 263 GLU GLU A . n A 1 31 LEU 31 264 264 LEU LEU A . n A 1 32 ILE 32 265 265 ILE ILE A . n A 1 33 GLY 33 266 266 GLY GLY A . n A 1 34 TYR 34 267 267 TYR TYR A . n A 1 35 HIS 35 268 268 HIS HIS A . n A 1 36 PRO 36 269 269 PRO PRO A . n A 1 37 GLU 37 270 270 GLU GLU A . n A 1 38 GLU 38 271 271 GLU GLU A . n A 1 39 LEU 39 272 272 LEU LEU A . n A 1 40 LEU 40 273 273 LEU LEU A . n A 1 41 GLY 41 274 274 GLY GLY A . n A 1 42 ARG 42 275 275 ARG ARG A . n A 1 43 SER 43 276 276 SER SER A . n A 1 44 ALA 44 277 277 ALA ALA A . n A 1 45 TYR 45 278 278 TYR TYR A . n A 1 46 GLU 46 279 279 GLU GLU A . n A 1 47 PHE 47 280 280 PHE PHE A . n A 1 48 TYR 48 281 281 TYR TYR A . n A 1 49 HIS 49 282 282 HIS HIS A . n A 1 50 ALA 50 283 283 ALA ALA A . n A 1 51 LEU 51 284 284 LEU LEU A . n A 1 52 ASP 52 285 285 ASP ASP A . n A 1 53 SER 53 286 286 SER SER A . n A 1 54 GLU 54 287 287 GLU GLU A . n A 1 55 ASN 55 288 288 ASN ASN A . n A 1 56 MET 56 289 289 MET MET A . n A 1 57 THR 57 290 290 THR THR A . n A 1 58 LYS 58 291 291 LYS LYS A . n A 1 59 SER 59 292 292 SER SER A . n A 1 60 HIS 60 293 293 HIS HIS A . n A 1 61 GLN 61 294 294 GLN GLN A . n A 1 62 ASN 62 295 295 ASN ASN A . n A 1 63 LEU 63 296 296 LEU LEU A . n A 1 64 CYS 64 297 297 CYS CYS A . n A 1 65 THR 65 298 298 THR THR A . n A 1 66 LYS 66 299 299 LYS LYS A . n A 1 67 GLY 67 300 300 GLY GLY A . n A 1 68 GLN 68 301 301 GLN GLN A . n A 1 69 VAL 69 302 302 VAL VAL A . n A 1 70 VAL 70 303 303 VAL VAL A . n A 1 71 SER 71 304 304 SER SER A . n A 1 72 GLY 72 305 305 GLY GLY A . n A 1 73 GLN 73 306 306 GLN GLN A . n A 1 74 TYR 74 307 307 TYR TYR A . n A 1 75 ARG 75 308 308 ARG ARG A . n A 1 76 MET 76 309 309 MET MET A . n A 1 77 LEU 77 310 310 LEU LEU A . n A 1 78 ALA 78 311 311 ALA ALA A . n A 1 79 LYS 79 312 312 LYS LYS A . n A 1 80 HIS 80 313 313 HIS HIS A . n A 1 81 GLY 81 314 314 GLY GLY A . n A 1 82 GLY 82 315 315 GLY GLY A . n A 1 83 TYR 83 316 316 TYR TYR A . n A 1 84 VAL 84 317 317 VAL VAL A . n A 1 85 TRP 85 318 318 TRP TRP A . n A 1 86 LEU 86 319 319 LEU LEU A . n A 1 87 GLU 87 320 320 GLU GLU A . n A 1 88 THR 88 321 321 THR THR A . n A 1 89 GLN 89 322 322 GLN GLN A . n A 1 90 GLY 90 323 323 GLY GLY A . n A 1 91 THR 91 324 324 THR THR A . n A 1 92 VAL 92 325 325 VAL VAL A . n A 1 93 ILE 93 326 326 ILE ILE A . n A 1 94 TYR 94 327 327 TYR TYR A . n A 1 95 ASN 95 328 ? ? ? A . n A 1 96 PRO 96 329 ? ? ? A . n A 1 97 ARG 97 330 ? ? ? A . n A 1 98 ASN 98 331 ? ? ? A . n A 1 99 LEU 99 332 ? ? ? A . n A 1 100 GLN 100 333 ? ? ? A . n A 1 101 PRO 101 334 334 PRO PRO A . n A 1 102 GLN 102 335 335 GLN GLN A . n A 1 103 CYS 103 336 336 CYS CYS A . n A 1 104 ILE 104 337 337 ILE ILE A . n A 1 105 MET 105 338 338 MET MET A . n A 1 106 CYS 106 339 339 CYS CYS A . n A 1 107 VAL 107 340 340 VAL VAL A . n A 1 108 ASN 108 341 341 ASN ASN A . n A 1 109 TYR 109 342 342 TYR TYR A . n A 1 110 VAL 110 343 343 VAL VAL A . n A 1 111 LEU 111 344 344 LEU LEU A . n A 1 112 SER 112 345 345 SER SER A . n A 1 113 GLU 113 346 346 GLU GLU A . n A 1 114 ILE 114 347 347 ILE ILE A . n A 1 115 GLU 115 348 348 GLU GLU A . n A 1 116 LYS 116 349 ? ? ? A . n A 1 117 ASN 117 350 ? ? ? A . n B 2 1 GLY 1 350 ? ? ? B . n B 2 2 GLU 2 351 ? ? ? B . n B 2 3 PHE 3 352 ? ? ? B . n B 2 4 LYS 4 353 ? ? ? B . n B 2 5 GLY 5 354 ? ? ? B . n B 2 6 LEU 6 355 ? ? ? B . n B 2 7 ASN 7 356 ? ? ? B . n B 2 8 VAL 8 357 ? ? ? B . n B 2 9 CYS 9 358 ? ? ? B . n B 2 10 GLN 10 359 ? ? ? B . n B 2 11 PRO 11 360 360 PRO PRO B . n B 2 12 THR 12 361 361 THR THR B . n B 2 13 ARG 13 362 362 ARG ARG B . n B 2 14 PHE 14 363 363 PHE PHE B . n B 2 15 ILE 15 364 364 ILE ILE B . n B 2 16 SER 16 365 365 SER SER B . n B 2 17 ARG 17 366 366 ARG ARG B . n B 2 18 HIS 18 367 367 HIS HIS B . n B 2 19 ASN 19 368 368 ASN ASN B . n B 2 20 ILE 20 369 369 ILE ILE B . n B 2 21 GLU 21 370 370 GLU GLU B . n B 2 22 GLY 22 371 371 GLY GLY B . n B 2 23 ILE 23 372 372 ILE ILE B . n B 2 24 PHE 24 373 373 PHE PHE B . n B 2 25 THR 25 374 374 THR THR B . n B 2 26 PHE 26 375 375 PHE PHE B . n B 2 27 VAL 27 376 376 VAL VAL B . n B 2 28 ASP 28 377 377 ASP ASP B . n B 2 29 HIS 29 378 378 HIS HIS B . n B 2 30 ARG 30 379 379 ARG ARG B . n B 2 31 CYS 31 380 380 CYS CYS B . n B 2 32 VAL 32 381 381 VAL VAL B . n B 2 33 ALA 33 382 382 ALA ALA B . n B 2 34 THR 34 383 383 THR THR B . n B 2 35 VAL 35 384 384 VAL VAL B . n B 2 36 GLY 36 385 385 GLY GLY B . n B 2 37 TYR 37 386 386 TYR TYR B . n B 2 38 GLN 38 387 387 GLN GLN B . n B 2 39 PRO 39 388 388 PRO PRO B . n B 2 40 GLN 40 389 389 GLN GLN B . n B 2 41 GLU 41 390 390 GLU GLU B . n B 2 42 LEU 42 391 391 LEU LEU B . n B 2 43 LEU 43 392 392 LEU LEU B . n B 2 44 GLY 44 393 393 GLY GLY B . n B 2 45 LYS 45 394 394 LYS LYS B . n B 2 46 ASN 46 395 395 ASN ASN B . n B 2 47 ILE 47 396 396 ILE ILE B . n B 2 48 VAL 48 397 397 VAL VAL B . n B 2 49 GLU 49 398 398 GLU GLU B . n B 2 50 PHE 50 399 399 PHE PHE B . n B 2 51 CYS 51 400 400 CYS CYS B . n B 2 52 HIS 52 401 401 HIS HIS B . n B 2 53 PRO 53 402 402 PRO PRO B . n B 2 54 GLU 54 403 403 GLU GLU B . n B 2 55 ASP 55 404 404 ASP ASP B . n B 2 56 GLN 56 405 405 GLN GLN B . n B 2 57 GLN 57 406 406 GLN GLN B . n B 2 58 LEU 58 407 407 LEU LEU B . n B 2 59 LEU 59 408 408 LEU LEU B . n B 2 60 ARG 60 409 409 ARG ARG B . n B 2 61 ASP 61 410 410 ASP ASP B . n B 2 62 SER 62 411 411 SER SER B . n B 2 63 PHE 63 412 412 PHE PHE B . n B 2 64 GLN 64 413 413 GLN GLN B . n B 2 65 GLN 65 414 414 GLN GLN B . n B 2 66 VAL 66 415 415 VAL VAL B . n B 2 67 VAL 67 416 416 VAL VAL B . n B 2 68 LYS 68 417 417 LYS LYS B . n B 2 69 LEU 69 418 418 LEU LEU B . n B 2 70 LYS 70 419 419 LYS LYS B . n B 2 71 GLY 71 420 420 GLY GLY B . n B 2 72 GLN 72 421 421 GLN GLN B . n B 2 73 VAL 73 422 422 VAL VAL B . n B 2 74 LEU 74 423 423 LEU LEU B . n B 2 75 SER 75 424 424 SER SER B . n B 2 76 VAL 76 425 425 VAL VAL B . n B 2 77 MET 77 426 426 MET MET B . n B 2 78 PHE 78 427 427 PHE PHE B . n B 2 79 ARG 79 428 428 ARG ARG B . n B 2 80 PHE 80 429 429 PHE PHE B . n B 2 81 ARG 81 430 430 ARG ARG B . n B 2 82 SER 82 431 431 SER SER B . n B 2 83 LYS 83 432 432 LYS LYS B . n B 2 84 ASN 84 433 433 ASN ASN B . n B 2 85 GLN 85 434 434 GLN GLN B . n B 2 86 GLU 86 435 435 GLU GLU B . n B 2 87 TRP 87 436 436 TRP TRP B . n B 2 88 LEU 88 437 437 LEU LEU B . n B 2 89 TRP 89 438 438 TRP TRP B . n B 2 90 MET 90 439 439 MET MET B . n B 2 91 ARG 91 440 440 ARG ARG B . n B 2 92 THR 92 441 441 THR THR B . n B 2 93 SER 93 442 442 SER SER B . n B 2 94 SER 94 443 443 SER SER B . n B 2 95 PHE 95 444 444 PHE PHE B . n B 2 96 THR 96 445 445 THR THR B . n B 2 97 PHE 97 446 446 PHE PHE B . n B 2 98 GLN 98 447 447 GLN GLN B . n B 2 99 ASN 99 448 448 ASN ASN B . n B 2 100 PRO 100 449 449 PRO PRO B . n B 2 101 TYR 101 450 450 TYR TYR B . n B 2 102 SER 102 451 451 SER SER B . n B 2 103 ASP 103 452 452 ASP ASP B . n B 2 104 GLU 104 453 453 GLU GLU B . n B 2 105 ILE 105 454 454 ILE ILE B . n B 2 106 GLU 106 455 455 GLU GLU B . n B 2 107 TYR 107 456 456 TYR TYR B . n B 2 108 ILE 108 457 457 ILE ILE B . n B 2 109 ILE 109 458 458 ILE ILE B . n B 2 110 CYS 110 459 459 CYS CYS B . n B 2 111 THR 111 460 460 THR THR B . n B 2 112 ASN 112 461 461 ASN ASN B . n B 2 113 THR 113 462 462 THR THR B . n B 2 114 ASN 114 463 463 ASN ASN B . n B 2 115 VAL 115 464 464 VAL VAL B . n B 2 116 LYS 116 465 465 LYS LYS B . n B 2 117 ASN 117 466 466 ASN ASN B . n B 2 118 SER 118 467 467 SER SER B . n B 2 119 SER 119 468 468 SER SER B . n B 2 120 GLN 120 469 ? ? ? B . n B 2 121 GLU 121 470 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 0XB 1 401 1 0XB 0XB A . D 4 PE8 1 402 1 PE8 PE8 A . E 5 HOH 1 501 3 HOH HOH A . E 5 HOH 2 502 6 HOH HOH A . E 5 HOH 3 503 8 HOH HOH A . E 5 HOH 4 504 9 HOH HOH A . E 5 HOH 5 505 11 HOH HOH A . E 5 HOH 6 506 16 HOH HOH A . E 5 HOH 7 507 17 HOH HOH A . E 5 HOH 8 508 20 HOH HOH A . E 5 HOH 9 509 22 HOH HOH A . E 5 HOH 10 510 25 HOH HOH A . E 5 HOH 11 511 26 HOH HOH A . E 5 HOH 12 512 27 HOH HOH A . E 5 HOH 13 513 30 HOH HOH A . E 5 HOH 14 514 32 HOH HOH A . E 5 HOH 15 515 35 HOH HOH A . E 5 HOH 16 516 39 HOH HOH A . E 5 HOH 17 517 42 HOH HOH A . E 5 HOH 18 518 43 HOH HOH A . E 5 HOH 19 519 47 HOH HOH A . E 5 HOH 20 520 54 HOH HOH A . E 5 HOH 21 521 62 HOH HOH A . E 5 HOH 22 522 64 HOH HOH A . E 5 HOH 23 523 67 HOH HOH A . E 5 HOH 24 524 74 HOH HOH A . E 5 HOH 25 525 84 HOH HOH A . E 5 HOH 26 526 88 HOH HOH A . E 5 HOH 27 527 90 HOH HOH A . E 5 HOH 28 528 91 HOH HOH A . E 5 HOH 29 529 96 HOH HOH A . E 5 HOH 30 530 97 HOH HOH A . E 5 HOH 31 531 100 HOH HOH A . E 5 HOH 32 532 103 HOH HOH A . E 5 HOH 33 533 104 HOH HOH A . E 5 HOH 34 534 105 HOH HOH A . E 5 HOH 35 535 113 HOH HOH A . E 5 HOH 36 536 114 HOH HOH A . E 5 HOH 37 537 115 HOH HOH A . E 5 HOH 38 538 122 HOH HOH A . E 5 HOH 39 539 123 HOH HOH A . E 5 HOH 40 540 89 HOH HOH A . F 5 HOH 1 501 55 HOH HOH B . F 5 HOH 2 502 92 HOH HOH B . F 5 HOH 3 503 99 HOH HOH B . F 5 HOH 4 504 125 HOH HOH B . F 5 HOH 5 505 1 HOH HOH B . F 5 HOH 6 506 2 HOH HOH B . F 5 HOH 7 507 4 HOH HOH B . F 5 HOH 8 508 5 HOH HOH B . F 5 HOH 9 509 7 HOH HOH B . F 5 HOH 10 510 10 HOH HOH B . F 5 HOH 11 511 12 HOH HOH B . F 5 HOH 12 512 13 HOH HOH B . F 5 HOH 13 513 14 HOH HOH B . F 5 HOH 14 514 15 HOH HOH B . F 5 HOH 15 515 18 HOH HOH B . F 5 HOH 16 516 19 HOH HOH B . F 5 HOH 17 517 21 HOH HOH B . F 5 HOH 18 518 23 HOH HOH B . F 5 HOH 19 519 24 HOH HOH B . F 5 HOH 20 520 28 HOH HOH B . F 5 HOH 21 521 29 HOH HOH B . F 5 HOH 22 522 31 HOH HOH B . F 5 HOH 23 523 33 HOH HOH B . F 5 HOH 24 524 34 HOH HOH B . F 5 HOH 25 525 36 HOH HOH B . F 5 HOH 26 526 37 HOH HOH B . F 5 HOH 27 527 38 HOH HOH B . F 5 HOH 28 528 40 HOH HOH B . F 5 HOH 29 529 41 HOH HOH B . F 5 HOH 30 530 44 HOH HOH B . F 5 HOH 31 531 45 HOH HOH B . F 5 HOH 32 532 46 HOH HOH B . F 5 HOH 33 533 48 HOH HOH B . F 5 HOH 34 534 49 HOH HOH B . F 5 HOH 35 535 50 HOH HOH B . F 5 HOH 36 536 51 HOH HOH B . F 5 HOH 37 537 52 HOH HOH B . F 5 HOH 38 538 53 HOH HOH B . F 5 HOH 39 539 56 HOH HOH B . F 5 HOH 40 540 57 HOH HOH B . F 5 HOH 41 541 58 HOH HOH B . F 5 HOH 42 542 59 HOH HOH B . F 5 HOH 43 543 60 HOH HOH B . F 5 HOH 44 544 61 HOH HOH B . F 5 HOH 45 545 63 HOH HOH B . F 5 HOH 46 546 65 HOH HOH B . F 5 HOH 47 547 66 HOH HOH B . F 5 HOH 48 548 68 HOH HOH B . F 5 HOH 49 549 69 HOH HOH B . F 5 HOH 50 550 70 HOH HOH B . F 5 HOH 51 551 71 HOH HOH B . F 5 HOH 52 552 72 HOH HOH B . F 5 HOH 53 553 73 HOH HOH B . F 5 HOH 54 554 75 HOH HOH B . F 5 HOH 55 555 76 HOH HOH B . F 5 HOH 56 556 77 HOH HOH B . F 5 HOH 57 557 78 HOH HOH B . F 5 HOH 58 558 79 HOH HOH B . F 5 HOH 59 559 80 HOH HOH B . F 5 HOH 60 560 81 HOH HOH B . F 5 HOH 61 561 82 HOH HOH B . F 5 HOH 62 562 83 HOH HOH B . F 5 HOH 63 563 85 HOH HOH B . F 5 HOH 64 564 86 HOH HOH B . F 5 HOH 65 565 87 HOH HOH B . F 5 HOH 66 566 93 HOH HOH B . F 5 HOH 67 567 94 HOH HOH B . F 5 HOH 68 568 95 HOH HOH B . F 5 HOH 69 569 98 HOH HOH B . F 5 HOH 70 570 101 HOH HOH B . F 5 HOH 71 571 102 HOH HOH B . F 5 HOH 72 572 106 HOH HOH B . F 5 HOH 73 573 107 HOH HOH B . F 5 HOH 74 574 108 HOH HOH B . F 5 HOH 75 575 109 HOH HOH B . F 5 HOH 76 576 112 HOH HOH B . F 5 HOH 77 577 116 HOH HOH B . F 5 HOH 78 578 120 HOH HOH B . F 5 HOH 79 579 121 HOH HOH B . F 5 HOH 80 580 124 HOH HOH B . F 5 HOH 81 581 1 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2350 ? 1 MORE -12 ? 1 'SSA (A^2)' 10590 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 580 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-04-03 2 'Structure model' 1 1 2018-05-30 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Derived calculations' 4 3 'Structure model' Advisory 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Derived calculations' 8 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_distant_solvent_atoms 2 2 'Structure model' pdbx_struct_assembly_gen 3 2 'Structure model' pdbx_struct_assembly_prop 4 2 'Structure model' pdbx_struct_oper_list 5 2 'Structure model' pdbx_unobs_or_zero_occ_atoms 6 2 'Structure model' pdbx_unobs_or_zero_occ_residues 7 3 'Structure model' chem_comp_atom 8 3 'Structure model' chem_comp_bond 9 3 'Structure model' database_2 10 3 'Structure model' pdbx_initial_refinement_model 11 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 12 3 'Structure model' pdbx_unobs_or_zero_occ_residues 13 3 'Structure model' struct_ref_seq_dif 14 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_struct_assembly_prop.value' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 19.2428 -52.4154 8.2445 0.2151 0.3178 0.2880 -0.0289 0.0069 -0.1064 5.7363 7.1131 7.6760 -2.4619 -4.0924 3.6678 -0.2936 0.4723 -0.6645 -0.0629 0.1202 -0.2991 0.6904 0.4032 0.1303 'X-RAY DIFFRACTION' 2 ? refined 13.8207 -42.0696 17.9956 0.2016 0.1426 0.2162 -0.0577 -0.0142 -0.0454 4.3064 3.9142 7.2786 -3.9194 -1.7995 0.8097 0.1080 0.0863 -0.0479 0.5573 -0.2538 0.1546 -0.3565 -0.1431 0.0996 'X-RAY DIFFRACTION' 3 ? refined 25.1604 -49.7799 11.3740 0.2098 0.2919 0.5210 0.0004 -0.0827 0.0091 7.8708 7.1712 9.0545 5.7300 -3.4357 -0.0432 -0.0311 0.0597 -1.4784 0.3103 -0.1315 -1.5538 0.6897 0.2023 0.2424 'X-RAY DIFFRACTION' 4 ? refined 21.2152 -38.8023 14.6128 0.2177 0.1740 0.2942 -0.0588 -0.1031 -0.0136 1.6352 6.4980 4.9527 0.2876 -2.5802 -0.9613 -0.0052 -0.1712 -0.1039 0.3967 -0.0600 -0.6780 0.0133 0.2035 0.1194 'X-RAY DIFFRACTION' 5 ? refined 7.0468 -35.9389 6.3199 0.2004 0.1983 0.2951 0.0280 -0.0835 0.0085 8.3140 8.0992 8.1373 6.5347 -6.1514 -5.1032 -0.0410 0.4411 1.0861 0.0764 0.3002 0.7905 -0.5090 -0.6205 -0.2029 'X-RAY DIFFRACTION' 6 ? refined 16.3238 -42.3592 5.4721 0.1543 0.1771 0.1668 -0.0364 -0.0132 -0.0044 3.1994 3.9517 4.3674 -0.0418 -2.5160 -0.8204 -0.1540 0.2194 -0.0496 -0.2053 -0.0399 -0.3980 -0.1346 0.1582 0.1310 'X-RAY DIFFRACTION' 7 ? refined 13.2787 -46.5431 10.1229 0.1383 0.1012 0.1380 -0.0217 -0.0277 -0.0228 5.4546 6.5616 7.1211 0.7224 -1.3106 -0.1741 0.0185 0.0667 0.0134 -0.1623 -0.0866 -0.1107 -0.1213 0.2051 0.1213 'X-RAY DIFFRACTION' 8 ? refined 12.023 -59.607 19.556 0.2027 0.1592 0.0991 -0.0015 0.0164 -0.0347 5.9565 6.6919 3.2721 -0.8423 1.7007 -1.4091 -0.1105 0.0790 0.0220 0.3999 0.1600 0.0104 -0.2692 -0.1908 -0.1035 'X-RAY DIFFRACTION' 9 ? refined 15.599 -55.150 28.713 0.1656 0.2184 0.1574 0.0640 -0.0309 -0.0128 4.7882 9.0622 6.5656 -0.5358 2.0962 -0.6283 0.1618 0.1826 0.1125 -0.3416 -0.1424 0.5249 -0.2991 -0.6876 -0.0377 'X-RAY DIFFRACTION' 10 ? refined 17.186 -64.699 25.931 0.2008 0.3072 0.1829 -0.0657 -0.0035 0.0069 4.3781 8.3962 7.9513 -2.3248 3.0683 -5.2665 0.3818 -0.3274 -0.0646 -0.4434 0.1737 0.5148 0.7922 -1.0836 -0.4695 'X-RAY DIFFRACTION' 11 ? refined 1.131 -67.072 21.038 0.1830 0.1035 0.1234 -0.0294 -0.0137 0.0179 3.8874 3.0975 4.9298 0.7620 3.0952 3.3605 0.2577 -0.1541 -0.3492 0.2232 -0.0353 -0.0387 0.4447 -0.0293 -0.1931 'X-RAY DIFFRACTION' 12 ? refined -1.429 -55.295 9.218 0.3512 0.3747 0.1932 0.0532 -0.0039 -0.0531 2.9592 8.0831 2.3925 -1.9647 0.9082 -4.3951 -0.5412 -0.9604 0.4414 1.0808 -0.4334 -0.2247 -0.5076 -0.3757 0.8737 'X-RAY DIFFRACTION' 13 ? refined 4.521 -60.402 26.893 0.1523 0.0960 0.0981 0.0256 -0.0032 0.0152 2.4056 1.7878 5.6460 -0.4946 -2.4540 0.6334 0.0753 0.1142 -0.0711 0.0319 0.1213 0.0132 -0.1588 -0.0095 -0.1507 'X-RAY DIFFRACTION' 14 ? refined 11.120 -58.842 1.055 0.4078 0.2315 0.0644 0.0530 0.0541 -0.0024 1.1211 0.8184 6.1141 0.8646 0.9470 1.6284 -0.0239 0.2785 0.1591 -1.3566 0.0517 0.0677 0.0225 0.4079 -0.0485 'X-RAY DIFFRACTION' 15 ? refined 3.716 -55.279 24.615 0.1620 0.1489 0.0870 0.0061 -0.0168 -0.0110 5.3177 5.0767 3.2653 2.2835 -3.4377 -3.4380 0.1369 -0.0439 -0.0493 0.1495 -0.1808 -0.1767 -0.5039 0.3456 -0.0283 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 0:248) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 249:258) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 259:265) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 266:282) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 283:299) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 300:326) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 327:348) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 360:377) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 378:384) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 385:395) ; 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 396:417) ; 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 418:422) ; 'X-RAY DIFFRACTION' 13 13 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 423:446) ; 'X-RAY DIFFRACTION' 14 14 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 447:455) ; 'X-RAY DIFFRACTION' 15 15 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resseq 456:468) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-3000 'data collection' . ? 1 PHENIX 'model building' . ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHENIX phasing . ? 6 # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; # _pdbx_entry_details.entry_id 4GS9 _pdbx_entry_details.nonpolymer_details ;THE SMALL MOLECULE LIGAND BOUND TO THE HIF2ALPHA PAS-B DOMAIN IN THIS ENTRY IS IDENTICAL TO COMPOUND (23), WHICH DESCRIBED IN THE PRIMARY PUBLICATION ASSOCIATED WITH THIS ENTRY ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLN _pdbx_validate_close_contact.auth_seq_id_1 335 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 536 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.91 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 HZ3 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 LYS _pdbx_validate_symm_contact.auth_seq_id_1 253 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OE2 _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 GLU _pdbx_validate_symm_contact.auth_seq_id_2 370 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_556 _pdbx_validate_symm_contact.dist 1.52 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id MET _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 252 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id B _pdbx_validate_torsion.phi 83.85 _pdbx_validate_torsion.psi -0.36 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? B HOH 568 ? 6.34 . 2 1 O ? B HOH 569 ? 6.60 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 1 ? CE ? A LYS 4 CE 2 1 Y 0 A LYS 1 ? NZ ? A LYS 4 NZ 3 1 Y 0 A LYS 299 ? CE ? A LYS 66 CE 4 1 Y 0 A LYS 299 ? NZ ? A LYS 66 NZ 5 1 Y 0 A GLN 301 ? CD ? A GLN 68 CD 6 1 Y 0 A GLN 301 ? OE1 ? A GLN 68 OE1 7 1 Y 0 A GLN 301 ? NE2 ? A GLN 68 NE2 8 1 Y 0 A GLN 335 ? CD ? A GLN 102 CD 9 1 Y 0 A GLN 335 ? OE1 ? A GLN 102 OE1 10 1 Y 0 A GLN 335 ? NE2 ? A GLN 102 NE2 11 1 Y 0 A GLU 346 ? CG ? A GLU 113 CG 12 1 Y 0 A GLU 346 ? CD ? A GLU 113 CD 13 1 Y 0 A GLU 346 ? OE1 ? A GLU 113 OE1 14 1 Y 0 A GLU 346 ? OE2 ? A GLU 113 OE2 15 1 Y 0 A ILE 347 ? CG1 ? A ILE 114 CG1 16 1 Y 0 A ILE 347 ? CD1 ? A ILE 114 CD1 17 1 Y 0 B GLN 389 ? CD ? B GLN 40 CD 18 1 Y 0 B LYS 419 ? NZ ? B LYS 70 NZ 19 1 Y 0 B ASN 433 ? CG ? B ASN 84 CG 20 1 Y 0 B ASN 433 ? OD1 ? B ASN 84 OD1 21 1 Y 0 B ASN 433 ? ND2 ? B ASN 84 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A GLU -1 ? A GLU 2 3 1 Y 1 A ASN 328 ? A ASN 95 4 1 Y 1 A PRO 329 ? A PRO 96 5 1 Y 1 A ARG 330 ? A ARG 97 6 1 Y 1 A ASN 331 ? A ASN 98 7 1 Y 1 A LEU 332 ? A LEU 99 8 1 Y 1 A GLN 333 ? A GLN 100 9 1 Y 1 A LYS 349 ? A LYS 116 10 1 Y 1 A ASN 350 ? A ASN 117 11 1 Y 1 B GLY 350 ? B GLY 1 12 1 Y 1 B GLU 351 ? B GLU 2 13 1 Y 1 B PHE 352 ? B PHE 3 14 1 Y 1 B LYS 353 ? B LYS 4 15 1 Y 1 B GLY 354 ? B GLY 5 16 1 Y 1 B LEU 355 ? B LEU 6 17 1 Y 1 B ASN 356 ? B ASN 7 18 1 Y 1 B VAL 357 ? B VAL 8 19 1 Y 1 B CYS 358 ? B CYS 9 20 1 Y 1 B GLN 359 ? B GLN 10 21 1 Y 1 B GLN 469 ? B GLN 120 22 1 Y 1 B GLU 470 ? B GLU 121 23 1 N 0 B HOH 576 ? F HOH ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0XB CAH C Y N 1 0XB CAG C Y N 2 0XB CAI C Y N 3 0XB CAQ C Y N 4 0XB FAR F N N 5 0XB CAP C Y N 6 0XB CAO C Y N 7 0XB NAN N N N 8 0XB CAM C Y N 9 0XB CAL C Y N 10 0XB NAT N N N 11 0XB OAS O N N 12 0XB OAU O N N 13 0XB CAF C Y N 14 0XB CAE C Y N 15 0XB CAD C Y N 16 0XB CAK C Y N 17 0XB NAC N Y N 18 0XB OAB O Y N 19 0XB NAJ N Y N 20 0XB HAH H N N 21 0XB HAG H N N 22 0XB HAI H N N 23 0XB HAP H N N 24 0XB HNAN H N N 25 0XB HAF H N N 26 0XB HAE H N N 27 ALA N N N N 28 ALA CA C N S 29 ALA C C N N 30 ALA O O N N 31 ALA CB C N N 32 ALA OXT O N N 33 ALA H H N N 34 ALA H2 H N N 35 ALA HA H N N 36 ALA HB1 H N N 37 ALA HB2 H N N 38 ALA HB3 H N N 39 ALA HXT H N N 40 ARG N N N N 41 ARG CA C N S 42 ARG C C N N 43 ARG O O N N 44 ARG CB C N N 45 ARG CG C N N 46 ARG CD C N N 47 ARG NE N N N 48 ARG CZ C N N 49 ARG NH1 N N N 50 ARG NH2 N N N 51 ARG OXT O N N 52 ARG H H N N 53 ARG H2 H N N 54 ARG HA H N N 55 ARG HB2 H N N 56 ARG HB3 H N N 57 ARG HG2 H N N 58 ARG HG3 H N N 59 ARG HD2 H N N 60 ARG HD3 H N N 61 ARG HE H N N 62 ARG HH11 H N N 63 ARG HH12 H N N 64 ARG HH21 H N N 65 ARG HH22 H N N 66 ARG HXT H N N 67 ASN N N N N 68 ASN CA C N S 69 ASN C C N N 70 ASN O O N N 71 ASN CB C N N 72 ASN CG C N N 73 ASN OD1 O N N 74 ASN ND2 N N N 75 ASN OXT O N N 76 ASN H H N N 77 ASN H2 H N N 78 ASN HA H N N 79 ASN HB2 H N N 80 ASN HB3 H N N 81 ASN HD21 H N N 82 ASN HD22 H N N 83 ASN HXT H N N 84 ASP N N N N 85 ASP CA C N S 86 ASP C C N N 87 ASP O O N N 88 ASP CB C N N 89 ASP CG C N N 90 ASP OD1 O N N 91 ASP OD2 O N N 92 ASP OXT O N N 93 ASP H H N N 94 ASP H2 H N N 95 ASP HA H N N 96 ASP HB2 H N N 97 ASP HB3 H N N 98 ASP HD2 H N N 99 ASP HXT H N N 100 CYS N N N N 101 CYS CA C N R 102 CYS C C N N 103 CYS O O N N 104 CYS CB C N N 105 CYS SG S N N 106 CYS OXT O N N 107 CYS H H N N 108 CYS H2 H N N 109 CYS HA H N N 110 CYS HB2 H N N 111 CYS HB3 H N N 112 CYS HG H N N 113 CYS HXT H N N 114 GLN N N N N 115 GLN CA C N S 116 GLN C C N N 117 GLN O O N N 118 GLN CB C N N 119 GLN CG C N N 120 GLN CD C N N 121 GLN OE1 O N N 122 GLN NE2 N N N 123 GLN OXT O N N 124 GLN H H N N 125 GLN H2 H N N 126 GLN HA H N N 127 GLN HB2 H N N 128 GLN HB3 H N N 129 GLN HG2 H N N 130 GLN HG3 H N N 131 GLN HE21 H N N 132 GLN HE22 H N N 133 GLN HXT H N N 134 GLU N N N N 135 GLU CA C N S 136 GLU C C N N 137 GLU O O N N 138 GLU CB C N N 139 GLU CG C N N 140 GLU CD C N N 141 GLU OE1 O N N 142 GLU OE2 O N N 143 GLU OXT O N N 144 GLU H H N N 145 GLU H2 H N N 146 GLU HA H N N 147 GLU HB2 H N N 148 GLU HB3 H N N 149 GLU HG2 H N N 150 GLU HG3 H N N 151 GLU HE2 H N N 152 GLU HXT H N N 153 GLY N N N N 154 GLY CA C N N 155 GLY C C N N 156 GLY O O N N 157 GLY OXT O N N 158 GLY H H N N 159 GLY H2 H N N 160 GLY HA2 H N N 161 GLY HA3 H N N 162 GLY HXT H N N 163 HIS N N N N 164 HIS CA C N S 165 HIS C C N N 166 HIS O O N N 167 HIS CB C N N 168 HIS CG C Y N 169 HIS ND1 N Y N 170 HIS CD2 C Y N 171 HIS CE1 C Y N 172 HIS NE2 N Y N 173 HIS OXT O N N 174 HIS H H N N 175 HIS H2 H N N 176 HIS HA H N N 177 HIS HB2 H N N 178 HIS HB3 H N N 179 HIS HD1 H N N 180 HIS HD2 H N N 181 HIS HE1 H N N 182 HIS HE2 H N N 183 HIS HXT H N N 184 HOH O O N N 185 HOH H1 H N N 186 HOH H2 H N N 187 ILE N N N N 188 ILE CA C N S 189 ILE C C N N 190 ILE O O N N 191 ILE CB C N S 192 ILE CG1 C N N 193 ILE CG2 C N N 194 ILE CD1 C N N 195 ILE OXT O N N 196 ILE H H N N 197 ILE H2 H N N 198 ILE HA H N N 199 ILE HB H N N 200 ILE HG12 H N N 201 ILE HG13 H N N 202 ILE HG21 H N N 203 ILE HG22 H N N 204 ILE HG23 H N N 205 ILE HD11 H N N 206 ILE HD12 H N N 207 ILE HD13 H N N 208 ILE HXT H N N 209 LEU N N N N 210 LEU CA C N S 211 LEU C C N N 212 LEU O O N N 213 LEU CB C N N 214 LEU CG C N N 215 LEU CD1 C N N 216 LEU CD2 C N N 217 LEU OXT O N N 218 LEU H H N N 219 LEU H2 H N N 220 LEU HA H N N 221 LEU HB2 H N N 222 LEU HB3 H N N 223 LEU HG H N N 224 LEU HD11 H N N 225 LEU HD12 H N N 226 LEU HD13 H N N 227 LEU HD21 H N N 228 LEU HD22 H N N 229 LEU HD23 H N N 230 LEU HXT H N N 231 LYS N N N N 232 LYS CA C N S 233 LYS C C N N 234 LYS O O N N 235 LYS CB C N N 236 LYS CG C N N 237 LYS CD C N N 238 LYS CE C N N 239 LYS NZ N N N 240 LYS OXT O N N 241 LYS H H N N 242 LYS H2 H N N 243 LYS HA H N N 244 LYS HB2 H N N 245 LYS HB3 H N N 246 LYS HG2 H N N 247 LYS HG3 H N N 248 LYS HD2 H N N 249 LYS HD3 H N N 250 LYS HE2 H N N 251 LYS HE3 H N N 252 LYS HZ1 H N N 253 LYS HZ2 H N N 254 LYS HZ3 H N N 255 LYS HXT H N N 256 MET N N N N 257 MET CA C N S 258 MET C C N N 259 MET O O N N 260 MET CB C N N 261 MET CG C N N 262 MET SD S N N 263 MET CE C N N 264 MET OXT O N N 265 MET H H N N 266 MET H2 H N N 267 MET HA H N N 268 MET HB2 H N N 269 MET HB3 H N N 270 MET HG2 H N N 271 MET HG3 H N N 272 MET HE1 H N N 273 MET HE2 H N N 274 MET HE3 H N N 275 MET HXT H N N 276 PE8 O1 O N N 277 PE8 C2 C N N 278 PE8 C3 C N N 279 PE8 O4 O N N 280 PE8 C5 C N N 281 PE8 C6 C N N 282 PE8 O7 O N N 283 PE8 C8 C N N 284 PE8 C9 C N N 285 PE8 O10 O N N 286 PE8 C11 C N N 287 PE8 C12 C N N 288 PE8 O13 O N N 289 PE8 C14 C N N 290 PE8 C15 C N N 291 PE8 O16 O N N 292 PE8 C17 C N N 293 PE8 C18 C N N 294 PE8 O19 O N N 295 PE8 C20 C N N 296 PE8 C21 C N N 297 PE8 O22 O N N 298 PE8 C23 C N N 299 PE8 C24 C N N 300 PE8 O25 O N N 301 PE8 HO1 H N N 302 PE8 H21 H N N 303 PE8 H22 H N N 304 PE8 H31 H N N 305 PE8 H32 H N N 306 PE8 H51 H N N 307 PE8 H52 H N N 308 PE8 H61 H N N 309 PE8 H62 H N N 310 PE8 H81 H N N 311 PE8 H82 H N N 312 PE8 H91 H N N 313 PE8 H92 H N N 314 PE8 H111 H N N 315 PE8 H112 H N N 316 PE8 H121 H N N 317 PE8 H122 H N N 318 PE8 H141 H N N 319 PE8 H142 H N N 320 PE8 H151 H N N 321 PE8 H152 H N N 322 PE8 H171 H N N 323 PE8 H172 H N N 324 PE8 H181 H N N 325 PE8 H182 H N N 326 PE8 H201 H N N 327 PE8 H202 H N N 328 PE8 H211 H N N 329 PE8 H212 H N N 330 PE8 H231 H N N 331 PE8 H232 H N N 332 PE8 H241 H N N 333 PE8 H242 H N N 334 PE8 H25 H N N 335 PHE N N N N 336 PHE CA C N S 337 PHE C C N N 338 PHE O O N N 339 PHE CB C N N 340 PHE CG C Y N 341 PHE CD1 C Y N 342 PHE CD2 C Y N 343 PHE CE1 C Y N 344 PHE CE2 C Y N 345 PHE CZ C Y N 346 PHE OXT O N N 347 PHE H H N N 348 PHE H2 H N N 349 PHE HA H N N 350 PHE HB2 H N N 351 PHE HB3 H N N 352 PHE HD1 H N N 353 PHE HD2 H N N 354 PHE HE1 H N N 355 PHE HE2 H N N 356 PHE HZ H N N 357 PHE HXT H N N 358 PRO N N N N 359 PRO CA C N S 360 PRO C C N N 361 PRO O O N N 362 PRO CB C N N 363 PRO CG C N N 364 PRO CD C N N 365 PRO OXT O N N 366 PRO H H N N 367 PRO HA H N N 368 PRO HB2 H N N 369 PRO HB3 H N N 370 PRO HG2 H N N 371 PRO HG3 H N N 372 PRO HD2 H N N 373 PRO HD3 H N N 374 PRO HXT H N N 375 SER N N N N 376 SER CA C N S 377 SER C C N N 378 SER O O N N 379 SER CB C N N 380 SER OG O N N 381 SER OXT O N N 382 SER H H N N 383 SER H2 H N N 384 SER HA H N N 385 SER HB2 H N N 386 SER HB3 H N N 387 SER HG H N N 388 SER HXT H N N 389 THR N N N N 390 THR CA C N S 391 THR C C N N 392 THR O O N N 393 THR CB C N R 394 THR OG1 O N N 395 THR CG2 C N N 396 THR OXT O N N 397 THR H H N N 398 THR H2 H N N 399 THR HA H N N 400 THR HB H N N 401 THR HG1 H N N 402 THR HG21 H N N 403 THR HG22 H N N 404 THR HG23 H N N 405 THR HXT H N N 406 TRP N N N N 407 TRP CA C N S 408 TRP C C N N 409 TRP O O N N 410 TRP CB C N N 411 TRP CG C Y N 412 TRP CD1 C Y N 413 TRP CD2 C Y N 414 TRP NE1 N Y N 415 TRP CE2 C Y N 416 TRP CE3 C Y N 417 TRP CZ2 C Y N 418 TRP CZ3 C Y N 419 TRP CH2 C Y N 420 TRP OXT O N N 421 TRP H H N N 422 TRP H2 H N N 423 TRP HA H N N 424 TRP HB2 H N N 425 TRP HB3 H N N 426 TRP HD1 H N N 427 TRP HE1 H N N 428 TRP HE3 H N N 429 TRP HZ2 H N N 430 TRP HZ3 H N N 431 TRP HH2 H N N 432 TRP HXT H N N 433 TYR N N N N 434 TYR CA C N S 435 TYR C C N N 436 TYR O O N N 437 TYR CB C N N 438 TYR CG C Y N 439 TYR CD1 C Y N 440 TYR CD2 C Y N 441 TYR CE1 C Y N 442 TYR CE2 C Y N 443 TYR CZ C Y N 444 TYR OH O N N 445 TYR OXT O N N 446 TYR H H N N 447 TYR H2 H N N 448 TYR HA H N N 449 TYR HB2 H N N 450 TYR HB3 H N N 451 TYR HD1 H N N 452 TYR HD2 H N N 453 TYR HE1 H N N 454 TYR HE2 H N N 455 TYR HH H N N 456 TYR HXT H N N 457 VAL N N N N 458 VAL CA C N S 459 VAL C C N N 460 VAL O O N N 461 VAL CB C N N 462 VAL CG1 C N N 463 VAL CG2 C N N 464 VAL OXT O N N 465 VAL H H N N 466 VAL H2 H N N 467 VAL HA H N N 468 VAL HB H N N 469 VAL HG11 H N N 470 VAL HG12 H N N 471 VAL HG13 H N N 472 VAL HG21 H N N 473 VAL HG22 H N N 474 VAL HG23 H N N 475 VAL HXT H N N 476 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0XB NAC CAD doub Y N 1 0XB NAC OAB sing Y N 2 0XB CAE CAD sing Y N 3 0XB CAE CAF doub Y N 4 0XB CAD CAK sing Y N 5 0XB OAB NAJ sing Y N 6 0XB CAF CAM sing Y N 7 0XB FAR CAQ sing N N 8 0XB CAQ CAI doub Y N 9 0XB CAQ CAP sing Y N 10 0XB CAK NAJ doub Y N 11 0XB CAK CAL sing Y N 12 0XB CAI CAH sing Y N 13 0XB CAP CAO doub Y N 14 0XB CAM CAL doub Y N 15 0XB CAM NAN sing N N 16 0XB CAH CAG doub Y N 17 0XB CAL NAT sing N N 18 0XB CAO CAG sing Y N 19 0XB CAO NAN sing N N 20 0XB NAT OAS sing N N 21 0XB NAT OAU doub N N 22 0XB CAH HAH sing N N 23 0XB CAG HAG sing N N 24 0XB CAI HAI sing N N 25 0XB CAP HAP sing N N 26 0XB NAN HNAN sing N N 27 0XB CAF HAF sing N N 28 0XB CAE HAE sing N N 29 ALA N CA sing N N 30 ALA N H sing N N 31 ALA N H2 sing N N 32 ALA CA C sing N N 33 ALA CA CB sing N N 34 ALA CA HA sing N N 35 ALA C O doub N N 36 ALA C OXT sing N N 37 ALA CB HB1 sing N N 38 ALA CB HB2 sing N N 39 ALA CB HB3 sing N N 40 ALA OXT HXT sing N N 41 ARG N CA sing N N 42 ARG N H sing N N 43 ARG N H2 sing N N 44 ARG CA C sing N N 45 ARG CA CB sing N N 46 ARG CA HA sing N N 47 ARG C O doub N N 48 ARG C OXT sing N N 49 ARG CB CG sing N N 50 ARG CB HB2 sing N N 51 ARG CB HB3 sing N N 52 ARG CG CD sing N N 53 ARG CG HG2 sing N N 54 ARG CG HG3 sing N N 55 ARG CD NE sing N N 56 ARG CD HD2 sing N N 57 ARG CD HD3 sing N N 58 ARG NE CZ sing N N 59 ARG NE HE sing N N 60 ARG CZ NH1 sing N N 61 ARG CZ NH2 doub N N 62 ARG NH1 HH11 sing N N 63 ARG NH1 HH12 sing N N 64 ARG NH2 HH21 sing N N 65 ARG NH2 HH22 sing N N 66 ARG OXT HXT sing N N 67 ASN N CA sing N N 68 ASN N H sing N N 69 ASN N H2 sing N N 70 ASN CA C sing N N 71 ASN CA CB sing N N 72 ASN CA HA sing N N 73 ASN C O doub N N 74 ASN C OXT sing N N 75 ASN CB CG sing N N 76 ASN CB HB2 sing N N 77 ASN CB HB3 sing N N 78 ASN CG OD1 doub N N 79 ASN CG ND2 sing N N 80 ASN ND2 HD21 sing N N 81 ASN ND2 HD22 sing N N 82 ASN OXT HXT sing N N 83 ASP N CA sing N N 84 ASP N H sing N N 85 ASP N H2 sing N N 86 ASP CA C sing N N 87 ASP CA CB sing N N 88 ASP CA HA sing N N 89 ASP C O doub N N 90 ASP C OXT sing N N 91 ASP CB CG sing N N 92 ASP CB HB2 sing N N 93 ASP CB HB3 sing N N 94 ASP CG OD1 doub N N 95 ASP CG OD2 sing N N 96 ASP OD2 HD2 sing N N 97 ASP OXT HXT sing N N 98 CYS N CA sing N N 99 CYS N H sing N N 100 CYS N H2 sing N N 101 CYS CA C sing N N 102 CYS CA CB sing N N 103 CYS CA HA sing N N 104 CYS C O doub N N 105 CYS C OXT sing N N 106 CYS CB SG sing N N 107 CYS CB HB2 sing N N 108 CYS CB HB3 sing N N 109 CYS SG HG sing N N 110 CYS OXT HXT sing N N 111 GLN N CA sing N N 112 GLN N H sing N N 113 GLN N H2 sing N N 114 GLN CA C sing N N 115 GLN CA CB sing N N 116 GLN CA HA sing N N 117 GLN C O doub N N 118 GLN C OXT sing N N 119 GLN CB CG sing N N 120 GLN CB HB2 sing N N 121 GLN CB HB3 sing N N 122 GLN CG CD sing N N 123 GLN CG HG2 sing N N 124 GLN CG HG3 sing N N 125 GLN CD OE1 doub N N 126 GLN CD NE2 sing N N 127 GLN NE2 HE21 sing N N 128 GLN NE2 HE22 sing N N 129 GLN OXT HXT sing N N 130 GLU N CA sing N N 131 GLU N H sing N N 132 GLU N H2 sing N N 133 GLU CA C sing N N 134 GLU CA CB sing N N 135 GLU CA HA sing N N 136 GLU C O doub N N 137 GLU C OXT sing N N 138 GLU CB CG sing N N 139 GLU CB HB2 sing N N 140 GLU CB HB3 sing N N 141 GLU CG CD sing N N 142 GLU CG HG2 sing N N 143 GLU CG HG3 sing N N 144 GLU CD OE1 doub N N 145 GLU CD OE2 sing N N 146 GLU OE2 HE2 sing N N 147 GLU OXT HXT sing N N 148 GLY N CA sing N N 149 GLY N H sing N N 150 GLY N H2 sing N N 151 GLY CA C sing N N 152 GLY CA HA2 sing N N 153 GLY CA HA3 sing N N 154 GLY C O doub N N 155 GLY C OXT sing N N 156 GLY OXT HXT sing N N 157 HIS N CA sing N N 158 HIS N H sing N N 159 HIS N H2 sing N N 160 HIS CA C sing N N 161 HIS CA CB sing N N 162 HIS CA HA sing N N 163 HIS C O doub N N 164 HIS C OXT sing N N 165 HIS CB CG sing N N 166 HIS CB HB2 sing N N 167 HIS CB HB3 sing N N 168 HIS CG ND1 sing Y N 169 HIS CG CD2 doub Y N 170 HIS ND1 CE1 doub Y N 171 HIS ND1 HD1 sing N N 172 HIS CD2 NE2 sing Y N 173 HIS CD2 HD2 sing N N 174 HIS CE1 NE2 sing Y N 175 HIS CE1 HE1 sing N N 176 HIS NE2 HE2 sing N N 177 HIS OXT HXT sing N N 178 HOH O H1 sing N N 179 HOH O H2 sing N N 180 ILE N CA sing N N 181 ILE N H sing N N 182 ILE N H2 sing N N 183 ILE CA C sing N N 184 ILE CA CB sing N N 185 ILE CA HA sing N N 186 ILE C O doub N N 187 ILE C OXT sing N N 188 ILE CB CG1 sing N N 189 ILE CB CG2 sing N N 190 ILE CB HB sing N N 191 ILE CG1 CD1 sing N N 192 ILE CG1 HG12 sing N N 193 ILE CG1 HG13 sing N N 194 ILE CG2 HG21 sing N N 195 ILE CG2 HG22 sing N N 196 ILE CG2 HG23 sing N N 197 ILE CD1 HD11 sing N N 198 ILE CD1 HD12 sing N N 199 ILE CD1 HD13 sing N N 200 ILE OXT HXT sing N N 201 LEU N CA sing N N 202 LEU N H sing N N 203 LEU N H2 sing N N 204 LEU CA C sing N N 205 LEU CA CB sing N N 206 LEU CA HA sing N N 207 LEU C O doub N N 208 LEU C OXT sing N N 209 LEU CB CG sing N N 210 LEU CB HB2 sing N N 211 LEU CB HB3 sing N N 212 LEU CG CD1 sing N N 213 LEU CG CD2 sing N N 214 LEU CG HG sing N N 215 LEU CD1 HD11 sing N N 216 LEU CD1 HD12 sing N N 217 LEU CD1 HD13 sing N N 218 LEU CD2 HD21 sing N N 219 LEU CD2 HD22 sing N N 220 LEU CD2 HD23 sing N N 221 LEU OXT HXT sing N N 222 LYS N CA sing N N 223 LYS N H sing N N 224 LYS N H2 sing N N 225 LYS CA C sing N N 226 LYS CA CB sing N N 227 LYS CA HA sing N N 228 LYS C O doub N N 229 LYS C OXT sing N N 230 LYS CB CG sing N N 231 LYS CB HB2 sing N N 232 LYS CB HB3 sing N N 233 LYS CG CD sing N N 234 LYS CG HG2 sing N N 235 LYS CG HG3 sing N N 236 LYS CD CE sing N N 237 LYS CD HD2 sing N N 238 LYS CD HD3 sing N N 239 LYS CE NZ sing N N 240 LYS CE HE2 sing N N 241 LYS CE HE3 sing N N 242 LYS NZ HZ1 sing N N 243 LYS NZ HZ2 sing N N 244 LYS NZ HZ3 sing N N 245 LYS OXT HXT sing N N 246 MET N CA sing N N 247 MET N H sing N N 248 MET N H2 sing N N 249 MET CA C sing N N 250 MET CA CB sing N N 251 MET CA HA sing N N 252 MET C O doub N N 253 MET C OXT sing N N 254 MET CB CG sing N N 255 MET CB HB2 sing N N 256 MET CB HB3 sing N N 257 MET CG SD sing N N 258 MET CG HG2 sing N N 259 MET CG HG3 sing N N 260 MET SD CE sing N N 261 MET CE HE1 sing N N 262 MET CE HE2 sing N N 263 MET CE HE3 sing N N 264 MET OXT HXT sing N N 265 PE8 O1 C2 sing N N 266 PE8 O1 HO1 sing N N 267 PE8 C2 C3 sing N N 268 PE8 C2 H21 sing N N 269 PE8 C2 H22 sing N N 270 PE8 C3 O4 sing N N 271 PE8 C3 H31 sing N N 272 PE8 C3 H32 sing N N 273 PE8 O4 C5 sing N N 274 PE8 C5 C6 sing N N 275 PE8 C5 H51 sing N N 276 PE8 C5 H52 sing N N 277 PE8 C6 O7 sing N N 278 PE8 C6 H61 sing N N 279 PE8 C6 H62 sing N N 280 PE8 O7 C8 sing N N 281 PE8 C8 C9 sing N N 282 PE8 C8 H81 sing N N 283 PE8 C8 H82 sing N N 284 PE8 C9 O10 sing N N 285 PE8 C9 H91 sing N N 286 PE8 C9 H92 sing N N 287 PE8 O10 C11 sing N N 288 PE8 C11 C12 sing N N 289 PE8 C11 H111 sing N N 290 PE8 C11 H112 sing N N 291 PE8 C12 O13 sing N N 292 PE8 C12 H121 sing N N 293 PE8 C12 H122 sing N N 294 PE8 O13 C14 sing N N 295 PE8 C14 C15 sing N N 296 PE8 C14 H141 sing N N 297 PE8 C14 H142 sing N N 298 PE8 C15 O16 sing N N 299 PE8 C15 H151 sing N N 300 PE8 C15 H152 sing N N 301 PE8 O16 C17 sing N N 302 PE8 C17 C18 sing N N 303 PE8 C17 H171 sing N N 304 PE8 C17 H172 sing N N 305 PE8 C18 O19 sing N N 306 PE8 C18 H181 sing N N 307 PE8 C18 H182 sing N N 308 PE8 O19 C20 sing N N 309 PE8 C20 C21 sing N N 310 PE8 C20 H201 sing N N 311 PE8 C20 H202 sing N N 312 PE8 C21 O22 sing N N 313 PE8 C21 H211 sing N N 314 PE8 C21 H212 sing N N 315 PE8 O22 C23 sing N N 316 PE8 C23 C24 sing N N 317 PE8 C23 H231 sing N N 318 PE8 C23 H232 sing N N 319 PE8 C24 O25 sing N N 320 PE8 C24 H241 sing N N 321 PE8 C24 H242 sing N N 322 PE8 O25 H25 sing N N 323 PHE N CA sing N N 324 PHE N H sing N N 325 PHE N H2 sing N N 326 PHE CA C sing N N 327 PHE CA CB sing N N 328 PHE CA HA sing N N 329 PHE C O doub N N 330 PHE C OXT sing N N 331 PHE CB CG sing N N 332 PHE CB HB2 sing N N 333 PHE CB HB3 sing N N 334 PHE CG CD1 doub Y N 335 PHE CG CD2 sing Y N 336 PHE CD1 CE1 sing Y N 337 PHE CD1 HD1 sing N N 338 PHE CD2 CE2 doub Y N 339 PHE CD2 HD2 sing N N 340 PHE CE1 CZ doub Y N 341 PHE CE1 HE1 sing N N 342 PHE CE2 CZ sing Y N 343 PHE CE2 HE2 sing N N 344 PHE CZ HZ sing N N 345 PHE OXT HXT sing N N 346 PRO N CA sing N N 347 PRO N CD sing N N 348 PRO N H sing N N 349 PRO CA C sing N N 350 PRO CA CB sing N N 351 PRO CA HA sing N N 352 PRO C O doub N N 353 PRO C OXT sing N N 354 PRO CB CG sing N N 355 PRO CB HB2 sing N N 356 PRO CB HB3 sing N N 357 PRO CG CD sing N N 358 PRO CG HG2 sing N N 359 PRO CG HG3 sing N N 360 PRO CD HD2 sing N N 361 PRO CD HD3 sing N N 362 PRO OXT HXT sing N N 363 SER N CA sing N N 364 SER N H sing N N 365 SER N H2 sing N N 366 SER CA C sing N N 367 SER CA CB sing N N 368 SER CA HA sing N N 369 SER C O doub N N 370 SER C OXT sing N N 371 SER CB OG sing N N 372 SER CB HB2 sing N N 373 SER CB HB3 sing N N 374 SER OG HG sing N N 375 SER OXT HXT sing N N 376 THR N CA sing N N 377 THR N H sing N N 378 THR N H2 sing N N 379 THR CA C sing N N 380 THR CA CB sing N N 381 THR CA HA sing N N 382 THR C O doub N N 383 THR C OXT sing N N 384 THR CB OG1 sing N N 385 THR CB CG2 sing N N 386 THR CB HB sing N N 387 THR OG1 HG1 sing N N 388 THR CG2 HG21 sing N N 389 THR CG2 HG22 sing N N 390 THR CG2 HG23 sing N N 391 THR OXT HXT sing N N 392 TRP N CA sing N N 393 TRP N H sing N N 394 TRP N H2 sing N N 395 TRP CA C sing N N 396 TRP CA CB sing N N 397 TRP CA HA sing N N 398 TRP C O doub N N 399 TRP C OXT sing N N 400 TRP CB CG sing N N 401 TRP CB HB2 sing N N 402 TRP CB HB3 sing N N 403 TRP CG CD1 doub Y N 404 TRP CG CD2 sing Y N 405 TRP CD1 NE1 sing Y N 406 TRP CD1 HD1 sing N N 407 TRP CD2 CE2 doub Y N 408 TRP CD2 CE3 sing Y N 409 TRP NE1 CE2 sing Y N 410 TRP NE1 HE1 sing N N 411 TRP CE2 CZ2 sing Y N 412 TRP CE3 CZ3 doub Y N 413 TRP CE3 HE3 sing N N 414 TRP CZ2 CH2 doub Y N 415 TRP CZ2 HZ2 sing N N 416 TRP CZ3 CH2 sing Y N 417 TRP CZ3 HZ3 sing N N 418 TRP CH2 HH2 sing N N 419 TRP OXT HXT sing N N 420 TYR N CA sing N N 421 TYR N H sing N N 422 TYR N H2 sing N N 423 TYR CA C sing N N 424 TYR CA CB sing N N 425 TYR CA HA sing N N 426 TYR C O doub N N 427 TYR C OXT sing N N 428 TYR CB CG sing N N 429 TYR CB HB2 sing N N 430 TYR CB HB3 sing N N 431 TYR CG CD1 doub Y N 432 TYR CG CD2 sing Y N 433 TYR CD1 CE1 sing Y N 434 TYR CD1 HD1 sing N N 435 TYR CD2 CE2 doub Y N 436 TYR CD2 HD2 sing N N 437 TYR CE1 CZ doub Y N 438 TYR CE1 HE1 sing N N 439 TYR CE2 CZ sing Y N 440 TYR CE2 HE2 sing N N 441 TYR CZ OH sing N N 442 TYR OH HH sing N N 443 TYR OXT HXT sing N N 444 VAL N CA sing N N 445 VAL N H sing N N 446 VAL N H2 sing N N 447 VAL CA C sing N N 448 VAL CA CB sing N N 449 VAL CA HA sing N N 450 VAL C O doub N N 451 VAL C OXT sing N N 452 VAL CB CG1 sing N N 453 VAL CB CG2 sing N N 454 VAL CB HB sing N N 455 VAL CG1 HG11 sing N N 456 VAL CG1 HG12 sing N N 457 VAL CG1 HG13 sing N N 458 VAL CG2 HG21 sing N N 459 VAL CG2 HG22 sing N N 460 VAL CG2 HG23 sing N N 461 VAL OXT HXT sing N N 462 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'N-(3-fluorophenyl)-4-nitro-2,1,3-benzoxadiazol-5-amine' 0XB 4 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL PE8 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3F1P _pdbx_initial_refinement_model.details ? #