data_4GXJ # _entry.id 4GXJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4GXJ pdb_00004gxj 10.2210/pdb4gxj/pdb NDB NA2020 ? ? RCSB RCSB074757 ? ? WWPDB D_1000074757 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4GXI . unspecified PDB 4GXK . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4GXJ _pdbx_database_status.recvd_initial_deposition_date 2012-09-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Freudenthal, B.D.' 1 'Beard, W.A.' 2 'Wilson, S.H.' 3 # _citation.id primary _citation.title 'DNA polymerase minor groove interactions modulate mutagenic bypass of a templating 8-oxoguanine lesion.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 41 _citation.page_first 1848 _citation.page_last 1858 _citation.year 2013 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23267011 _citation.pdbx_database_id_DOI 10.1093/nar/gks1276 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Freudenthal, B.D.' 1 ? primary 'Beard, W.A.' 2 ? primary 'Wilson, S.H.' 3 ? # _cell.entry_id 4GXJ _cell.length_a 55.084 _cell.length_b 77.432 _cell.length_c 55.125 _cell.angle_alpha 90.00 _cell.angle_beta 114.45 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4GXJ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 38213.656 1 '2.7.7.7, 4.2.99.-' R283K ? ? 2 polymer syn ;DNA (5'-D(P*GP*TP*CP*GP*G)-3') ; 1536.035 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3') ; 3085.029 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') ; 4860.144 1 ? ? ? ? 5 non-polymer syn "2'-deoxy-5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]cytidine" 501.165 1 ? ? 'manganese ion' ? 6 non-polymer syn 'MANGANESE (II) ION' 54.938 7 ? ? 'soidum ion' ? 7 non-polymer syn 'SODIUM ION' 22.990 2 ? ? 'water ion' ? 8 water nat water 18.015 102 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMKAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMKAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; A ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DA)' GCTGATGCGA P ? 4 polydeoxyribonucleotide no yes '(DC)(DC)(DG)(DA)(DC)(8OG)(DT)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACGTCGCATCAGC T ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LYS n 1 4 ARG n 1 5 LYS n 1 6 ALA n 1 7 PRO n 1 8 GLN n 1 9 GLU n 1 10 THR n 1 11 LEU n 1 12 ASN n 1 13 GLY n 1 14 GLY n 1 15 ILE n 1 16 THR n 1 17 ASP n 1 18 MET n 1 19 LEU n 1 20 THR n 1 21 GLU n 1 22 LEU n 1 23 ALA n 1 24 ASN n 1 25 PHE n 1 26 GLU n 1 27 LYS n 1 28 ASN n 1 29 VAL n 1 30 SER n 1 31 GLN n 1 32 ALA n 1 33 ILE n 1 34 HIS n 1 35 LYS n 1 36 TYR n 1 37 ASN n 1 38 ALA n 1 39 TYR n 1 40 ARG n 1 41 LYS n 1 42 ALA n 1 43 ALA n 1 44 SER n 1 45 VAL n 1 46 ILE n 1 47 ALA n 1 48 LYS n 1 49 TYR n 1 50 PRO n 1 51 HIS n 1 52 LYS n 1 53 ILE n 1 54 LYS n 1 55 SER n 1 56 GLY n 1 57 ALA n 1 58 GLU n 1 59 ALA n 1 60 LYS n 1 61 LYS n 1 62 LEU n 1 63 PRO n 1 64 GLY n 1 65 VAL n 1 66 GLY n 1 67 THR n 1 68 LYS n 1 69 ILE n 1 70 ALA n 1 71 GLU n 1 72 LYS n 1 73 ILE n 1 74 ASP n 1 75 GLU n 1 76 PHE n 1 77 LEU n 1 78 ALA n 1 79 THR n 1 80 GLY n 1 81 LYS n 1 82 LEU n 1 83 ARG n 1 84 LYS n 1 85 LEU n 1 86 GLU n 1 87 LYS n 1 88 ILE n 1 89 ARG n 1 90 GLN n 1 91 ASP n 1 92 ASP n 1 93 THR n 1 94 SER n 1 95 SER n 1 96 SER n 1 97 ILE n 1 98 ASN n 1 99 PHE n 1 100 LEU n 1 101 THR n 1 102 ARG n 1 103 VAL n 1 104 SER n 1 105 GLY n 1 106 ILE n 1 107 GLY n 1 108 PRO n 1 109 SER n 1 110 ALA n 1 111 ALA n 1 112 ARG n 1 113 LYS n 1 114 PHE n 1 115 VAL n 1 116 ASP n 1 117 GLU n 1 118 GLY n 1 119 ILE n 1 120 LYS n 1 121 THR n 1 122 LEU n 1 123 GLU n 1 124 ASP n 1 125 LEU n 1 126 ARG n 1 127 LYS n 1 128 ASN n 1 129 GLU n 1 130 ASP n 1 131 LYS n 1 132 LEU n 1 133 ASN n 1 134 HIS n 1 135 HIS n 1 136 GLN n 1 137 ARG n 1 138 ILE n 1 139 GLY n 1 140 LEU n 1 141 LYS n 1 142 TYR n 1 143 PHE n 1 144 GLY n 1 145 ASP n 1 146 PHE n 1 147 GLU n 1 148 LYS n 1 149 ARG n 1 150 ILE n 1 151 PRO n 1 152 ARG n 1 153 GLU n 1 154 GLU n 1 155 MET n 1 156 LEU n 1 157 GLN n 1 158 MET n 1 159 GLN n 1 160 ASP n 1 161 ILE n 1 162 VAL n 1 163 LEU n 1 164 ASN n 1 165 GLU n 1 166 VAL n 1 167 LYS n 1 168 LYS n 1 169 VAL n 1 170 ASP n 1 171 SER n 1 172 GLU n 1 173 TYR n 1 174 ILE n 1 175 ALA n 1 176 THR n 1 177 VAL n 1 178 CYS n 1 179 GLY n 1 180 SER n 1 181 PHE n 1 182 ARG n 1 183 ARG n 1 184 GLY n 1 185 ALA n 1 186 GLU n 1 187 SER n 1 188 SER n 1 189 GLY n 1 190 ASP n 1 191 MET n 1 192 ASP n 1 193 VAL n 1 194 LEU n 1 195 LEU n 1 196 THR n 1 197 HIS n 1 198 PRO n 1 199 SER n 1 200 PHE n 1 201 THR n 1 202 SER n 1 203 GLU n 1 204 SER n 1 205 THR n 1 206 LYS n 1 207 GLN n 1 208 PRO n 1 209 LYS n 1 210 LEU n 1 211 LEU n 1 212 HIS n 1 213 GLN n 1 214 VAL n 1 215 VAL n 1 216 GLU n 1 217 GLN n 1 218 LEU n 1 219 GLN n 1 220 LYS n 1 221 VAL n 1 222 HIS n 1 223 PHE n 1 224 ILE n 1 225 THR n 1 226 ASP n 1 227 THR n 1 228 LEU n 1 229 SER n 1 230 LYS n 1 231 GLY n 1 232 GLU n 1 233 THR n 1 234 LYS n 1 235 PHE n 1 236 MET n 1 237 GLY n 1 238 VAL n 1 239 CYS n 1 240 GLN n 1 241 LEU n 1 242 PRO n 1 243 SER n 1 244 LYS n 1 245 ASN n 1 246 ASP n 1 247 GLU n 1 248 LYS n 1 249 GLU n 1 250 TYR n 1 251 PRO n 1 252 HIS n 1 253 ARG n 1 254 ARG n 1 255 ILE n 1 256 ASP n 1 257 ILE n 1 258 ARG n 1 259 LEU n 1 260 ILE n 1 261 PRO n 1 262 LYS n 1 263 ASP n 1 264 GLN n 1 265 TYR n 1 266 TYR n 1 267 CYS n 1 268 GLY n 1 269 VAL n 1 270 LEU n 1 271 TYR n 1 272 PHE n 1 273 THR n 1 274 GLY n 1 275 SER n 1 276 ASP n 1 277 ILE n 1 278 PHE n 1 279 ASN n 1 280 LYS n 1 281 ASN n 1 282 MET n 1 283 LYS n 1 284 ALA n 1 285 HIS n 1 286 ALA n 1 287 LEU n 1 288 GLU n 1 289 LYS n 1 290 GLY n 1 291 PHE n 1 292 THR n 1 293 ILE n 1 294 ASN n 1 295 GLU n 1 296 TYR n 1 297 THR n 1 298 ILE n 1 299 ARG n 1 300 PRO n 1 301 LEU n 1 302 GLY n 1 303 VAL n 1 304 THR n 1 305 GLY n 1 306 VAL n 1 307 ALA n 1 308 GLY n 1 309 GLU n 1 310 PRO n 1 311 LEU n 1 312 PRO n 1 313 VAL n 1 314 ASP n 1 315 SER n 1 316 GLU n 1 317 LYS n 1 318 ASP n 1 319 ILE n 1 320 PHE n 1 321 ASP n 1 322 TYR n 1 323 ILE n 1 324 GLN n 1 325 TRP n 1 326 LYS n 1 327 TYR n 1 328 ARG n 1 329 GLU n 1 330 PRO n 1 331 LYS n 1 332 ASP n 1 333 ARG n 1 334 SER n 1 335 GLU n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DG n 2 5 DG n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DA n 4 1 DC n 4 2 DC n 4 3 DG n 4 4 DA n 4 5 DC n 4 6 8OG n 4 7 DT n 4 8 DC n 4 9 DG n 4 10 DC n 4 11 DA n 4 12 DT n 4 13 DC n 4 14 DA n 4 15 DG n 4 16 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Tap56 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pWL11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'synthetic construct' ? 32630 ? 3 1 sample ? ? 'synthetic construct' ? 32630 ? 4 1 sample ? ? 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLB_HUMAN P06746 1 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 ? 2 PDB 4GXJ 4GXJ 4 ? ? ? 3 PDB 4GXJ 4GXJ 3 ? ? ? 4 PDB 4GXJ 4GXJ 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4GXJ A 1 ? 335 ? P06746 1 ? 335 ? 1 335 2 2 4GXJ T 1 ? 16 ? 4GXJ 1 ? 16 ? 1 16 3 3 4GXJ P 1 ? 10 ? 4GXJ 1 ? 10 ? 1 10 4 4 4GXJ D 1 ? 5 ? 4GXJ 1 ? 5 ? 1 5 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4GXJ _struct_ref_seq_dif.mon_id LYS _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 283 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P06746 _struct_ref_seq_dif.db_mon_id ARG _struct_ref_seq_dif.pdbx_seq_db_seq_num 283 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 283 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6CF non-polymer . "2'-deoxy-5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]cytidine" ? 'C10 H16 F2 N3 O12 P3' 501.165 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4GXJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.24 _exptl_crystal.density_percent_sol 45.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '50mM Imidazole, 350mM Sodium Acetate, 18% Peg3350, pH 8.0, VAPOR DIFFUSION, temperature 291K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 92' _diffrn_detector.pdbx_collection_date 2011-07-13 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'MIRRORS VARIMAXHF' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54178 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4GXJ _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.196 _reflns.number_obs ? _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.09700 _reflns.pdbx_Rsym_value 0.09000 _reflns.pdbx_netI_over_sigmaI 14.7000 _reflns.B_iso_Wilson_estimate 36.87 _reflns.pdbx_redundancy 5.800 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.57900 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.950 _reflns_shell.pdbx_redundancy 5.70 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4GXJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 36585 _refine.ls_number_reflns_all 36585 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 21.06 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 86.5 _refine.ls_R_factor_obs 0.237 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.231 _refine.ls_R_factor_R_free 0.292 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.900 _refine.ls_number_reflns_R_free 3623 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -0.33990 _refine.aniso_B[2][2] 0.38800 _refine.aniso_B[3][3] -0.04810 _refine.aniso_B[1][2] -0.00000 _refine.aniso_B[1][3] 1.97780 _refine.aniso_B[2][3] -0.00000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.41 _refine.solvent_model_param_bsol 44.55 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 2FMS.PDB _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Restrained _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.470 _refine.pdbx_overall_phase_error 29.190 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2514 _refine_hist.pdbx_number_atoms_nucleic_acid 633 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 102 _refine_hist.number_atoms_total 3288 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 21.06 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.014 ? ? 3340 'X-RAY DIFFRACTION' ? f_angle_d 1.153 ? ? 4653 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 21.716 ? ? 1280 'X-RAY DIFFRACTION' ? f_chiral_restr 0.061 ? ? 505 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 477 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.1957 2.2246 1237 0.2965 85.00 0.3568 . . 150 . . . . 'X-RAY DIFFRACTION' . 2.2246 2.2550 1233 0.3004 86.00 0.3865 . . 142 . . . . 'X-RAY DIFFRACTION' . 2.2550 2.2872 1223 0.3259 83.00 0.4120 . . 154 . . . . 'X-RAY DIFFRACTION' . 2.2872 2.3213 1223 0.3122 84.00 0.3884 . . 162 . . . . 'X-RAY DIFFRACTION' . 2.3213 2.3575 1158 0.2980 83.00 0.3938 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.3575 2.3961 1256 0.3239 82.00 0.3560 . . 132 . . . . 'X-RAY DIFFRACTION' . 2.3961 2.4374 1173 0.3053 79.00 0.3987 . . 95 . . . . 'X-RAY DIFFRACTION' . 2.4374 2.4816 1120 0.3347 77.00 0.3557 . . 107 . . . . 'X-RAY DIFFRACTION' . 2.4816 2.5293 1146 0.3149 78.00 0.3964 . . 128 . . . . 'X-RAY DIFFRACTION' . 2.5293 2.5808 1122 0.3361 79.00 0.4282 . . 165 . . . . 'X-RAY DIFFRACTION' . 2.5808 2.6368 1188 0.3097 78.00 0.3558 . . 108 . . . . 'X-RAY DIFFRACTION' . 2.6368 2.6981 1113 0.3131 76.00 0.3792 . . 113 . . . . 'X-RAY DIFFRACTION' . 2.6981 2.7654 1025 0.3291 71.00 0.3787 . . 124 . . . . 'X-RAY DIFFRACTION' . 2.7654 2.8400 1046 0.2858 73.00 0.3330 . . 129 . . . . 'X-RAY DIFFRACTION' . 2.8400 2.9233 1100 0.2749 75.00 0.3447 . . 116 . . . . 'X-RAY DIFFRACTION' . 2.9233 3.0174 1171 0.2573 80.00 0.3732 . . 130 . . . . 'X-RAY DIFFRACTION' . 3.0174 3.1249 1321 0.2478 90.00 0.2998 . . 147 . . . . 'X-RAY DIFFRACTION' . 3.1249 3.2496 1510 0.2456 100.00 0.2847 . . 162 . . . . 'X-RAY DIFFRACTION' . 3.2496 3.3969 1441 0.2521 100.00 0.2900 . . 149 . . . . 'X-RAY DIFFRACTION' . 3.3969 3.5752 1461 0.2224 100.00 0.3019 . . 138 . . . . 'X-RAY DIFFRACTION' . 3.5752 3.7980 1490 0.1930 100.00 0.2644 . . 141 . . . . 'X-RAY DIFFRACTION' . 3.7980 4.0893 1463 0.1615 98.00 0.2369 . . 148 . . . . 'X-RAY DIFFRACTION' . 4.0893 4.4972 1428 0.1636 98.00 0.2213 . . 168 . . . . 'X-RAY DIFFRACTION' . 4.4972 5.1397 1425 0.1772 96.00 0.2289 . . 152 . . . . 'X-RAY DIFFRACTION' . 5.1397 6.4445 1434 0.2061 99.00 0.2628 . . 161 . . . . 'X-RAY DIFFRACTION' . 6.4445 21.0567 1455 0.2151 99.00 0.2450 . . 164 . . . . # _struct.entry_id 4GXJ _struct.title 'R283K DNA polymerase beta ternary complex with a templating 8OG and incoming dCTP analog' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4GXJ _struct_keywords.pdbx_keywords Transferase/DNA _struct_keywords.text 'Transferase, lyase/DNA polymerase, Transferase-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 7 ? K N N 7 ? L N N 6 ? M N N 6 ? N N N 6 ? O N N 8 ? P N N 8 ? Q N N 8 ? R N N 8 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 12 ? VAL A 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA A 32 ? LYS A 48 ? ALA A 32 LYS A 48 1 ? 17 HELX_P HELX_P3 3 SER A 55 ? LYS A 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY A 66 ? GLY A 80 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 5 LEU A 82 ? ASP A 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 6 ASP A 91 ? ARG A 102 ? ASP A 91 ARG A 102 1 ? 12 HELX_P HELX_P7 7 GLY A 107 ? GLU A 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR A 121 ? ASN A 128 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 9 GLU A 129 ? LEU A 132 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 10 ASN A 133 ? TYR A 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 TYR A 142 ? LYS A 148 ? TYR A 142 LYS A 148 1 ? 7 HELX_P HELX_P12 12 ARG A 152 ? ASP A 170 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 13 GLY A 179 ? ARG A 182 ? GLY A 179 ARG A 182 5 ? 4 HELX_P HELX_P14 14 LEU A 210 ? VAL A 221 ? LEU A 210 VAL A 221 1 ? 12 HELX_P HELX_P15 15 PRO A 261 ? ASP A 263 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 16 GLN A 264 ? GLY A 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 17 SER A 275 ? GLU A 288 ? SER A 275 GLU A 288 1 ? 14 HELX_P HELX_P18 18 SER A 315 ? GLN A 324 ? SER A 315 GLN A 324 1 ? 10 HELX_P HELX_P19 19 GLU A 329 ? ARG A 333 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? D DC 5 "O3'" ? ? ? 1_555 D 8OG 6 P ? ? T DC 5 T 8OG 6 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale2 covale both ? D 8OG 6 "O3'" ? ? ? 1_555 D DT 7 P ? ? T 8OG 6 T DT 7 1_555 ? ? ? ? ? ? ? 1.572 ? ? metalc1 metalc ? ? A HIS 51 NE2 ? ? ? 1_555 H MN . MN ? ? A HIS 51 A MN 404 1_555 ? ? ? ? ? ? ? 2.112 ? ? metalc2 metalc ? ? A THR 101 O ? ? ? 1_555 J NA . NA ? ? A THR 101 A NA 406 1_555 ? ? ? ? ? ? ? 2.201 ? ? metalc3 metalc ? ? A VAL 103 O ? ? ? 1_555 J NA . NA ? ? A VAL 103 A NA 406 1_555 ? ? ? ? ? ? ? 2.412 ? ? metalc4 metalc ? ? A ILE 106 O ? ? ? 1_555 J NA . NA ? ? A ILE 106 A NA 406 1_555 ? ? ? ? ? ? ? 2.411 ? ? metalc5 metalc ? ? A ASP 190 OD2 ? ? ? 1_555 F MN . MN ? ? A ASP 190 A MN 402 1_555 ? ? ? ? ? ? ? 2.056 ? ? metalc6 metalc ? ? A ASP 190 OD1 ? ? ? 1_555 G MN . MN ? ? A ASP 190 A MN 403 1_555 ? ? ? ? ? ? ? 2.041 ? ? metalc7 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 F MN . MN ? ? A ASP 192 A MN 402 1_555 ? ? ? ? ? ? ? 2.011 ? ? metalc8 metalc ? ? A ASP 192 OD2 ? ? ? 1_555 G MN . MN ? ? A ASP 192 A MN 403 1_555 ? ? ? ? ? ? ? 2.055 ? ? metalc9 metalc ? ? A ASP 256 OD2 ? ? ? 1_555 F MN . MN ? ? A ASP 256 A MN 402 1_555 ? ? ? ? ? ? ? 2.100 ? ? metalc10 metalc ? ? A ASP 314 OD2 ? ? ? 1_555 I MN . MN ? ? A ASP 314 A MN 405 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc11 metalc ? ? E 6CF . O2A ? ? ? 1_555 F MN . MN ? ? A 6CF 401 A MN 402 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc12 metalc ? ? E 6CF . O1B ? ? ? 1_555 G MN . MN ? ? A 6CF 401 A MN 403 1_555 ? ? ? ? ? ? ? 2.011 ? ? metalc13 metalc ? ? E 6CF . O2A ? ? ? 1_555 G MN . MN ? ? A 6CF 401 A MN 403 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc14 metalc ? ? E 6CF . O2G ? ? ? 1_555 G MN . MN ? ? A 6CF 401 A MN 403 1_555 ? ? ? ? ? ? ? 2.123 ? ? metalc15 metalc ? ? F MN . MN ? ? ? 1_555 O HOH . O ? ? A MN 402 A HOH 502 1_555 ? ? ? ? ? ? ? 2.218 ? ? metalc16 metalc ? ? F MN . MN ? ? ? 1_555 C DA 10 "O3'" ? ? A MN 402 P DA 10 1_555 ? ? ? ? ? ? ? 2.007 ? ? metalc17 metalc ? ? G MN . MN ? ? ? 1_555 O HOH . O ? ? A MN 403 A HOH 501 1_555 ? ? ? ? ? ? ? 2.101 ? ? metalc18 metalc ? ? I MN . MN ? ? ? 1_555 O HOH . O ? ? A MN 405 A HOH 571 1_555 ? ? ? ? ? ? ? 2.382 ? ? metalc19 metalc ? ? I MN . MN ? ? ? 1_555 O HOH . O ? ? A MN 405 A HOH 572 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc20 metalc ? ? I MN . MN ? ? ? 1_555 O HOH . O ? ? A MN 405 A HOH 573 1_555 ? ? ? ? ? ? ? 2.174 ? ? metalc21 metalc ? ? J NA . NA ? ? ? 1_555 O HOH . O ? ? A NA 406 A HOH 504 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc22 metalc ? ? J NA . NA ? ? ? 1_555 C DG 9 OP1 ? ? A NA 406 P DG 9 1_555 ? ? ? ? ? ? ? 2.476 ? ? metalc23 metalc ? ? J NA . NA ? ? ? 1_555 Q HOH . O ? ? A NA 406 P HOH 202 1_555 ? ? ? ? ? ? ? 2.500 ? ? metalc24 metalc ? ? C DG 4 N7 ? ? ? 1_555 L MN . MN ? ? P DG 4 P MN 101 1_555 ? ? ? ? ? ? ? 2.280 ? ? metalc25 metalc ? ? L MN . MN ? ? ? 1_555 Q HOH . O ? ? P MN 101 P HOH 208 1_555 ? ? ? ? ? ? ? 2.184 ? ? metalc26 metalc ? ? D DG 3 N7 ? ? ? 1_555 M MN . MN ? ? T DG 3 T MN 101 1_555 ? ? ? ? ? ? ? 2.638 ? ? metalc27 metalc ? ? M MN . MN ? ? ? 1_555 R HOH . O ? ? T MN 101 T HOH 204 1_555 ? ? ? ? ? ? ? 2.127 ? ? metalc28 metalc ? ? M MN . MN ? ? ? 1_555 R HOH . O ? ? T MN 101 T HOH 214 1_555 ? ? ? ? ? ? ? 2.208 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 D DC 5 N3 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 D DC 5 O2 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 D DC 5 N4 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 D DA 4 N1 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 D DA 4 N6 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 N3 ? ? ? 1_555 D DG 3 N1 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N4 ? ? ? 1_555 D DG 3 O6 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 O2 ? ? ? 1_555 D DG 3 N2 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 D DC 2 N3 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 D DC 2 O2 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 D DC 2 N4 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 5 N1 ? ? ? 1_555 D DC 1 N3 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 5 N2 ? ? ? 1_555 D DC 1 O2 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 5 O6 ? ? ? 1_555 D DC 1 N4 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 16 N3 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 16 O2 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 16 N4 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 15 N1 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 15 O6 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 15 N2 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 14 N1 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 14 N6 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 13 N3 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 13 O2 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 13 N4 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 12 N3 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 12 O4 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 11 N1 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 11 N6 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 10 N3 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 10 O2 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 10 N4 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 9 N1 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 9 O6 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 9 N2 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 8 N3 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 8 O2 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 8 N4 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DT 7 N3 ? ? P DA 10 T DT 7 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 274 A . ? GLY 274 A SER 275 A ? SER 275 A 1 1.53 2 ALA 307 A . ? ALA 307 A GLY 308 A ? GLY 308 A 1 -2.96 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 150 ? PRO A 151 ? ILE A 150 PRO A 151 A 2 SER A 187 ? SER A 188 ? SER A 187 SER A 188 B 1 ILE A 174 ? CYS A 178 ? ILE A 174 CYS A 178 B 2 MET A 191 ? THR A 196 ? MET A 191 THR A 196 B 3 ARG A 253 ? LEU A 259 ? ARG A 253 LEU A 259 B 4 LYS A 234 ? CYS A 239 ? LYS A 234 CYS A 239 B 5 ILE A 224 ? LYS A 230 ? ILE A 224 LYS A 230 C 1 PHE A 291 ? ILE A 293 ? PHE A 291 ILE A 293 C 2 ILE A 298 ? PRO A 300 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 150 ? N ILE A 150 O SER A 188 ? O SER A 188 B 1 2 N THR A 176 ? N THR A 176 O LEU A 194 ? O LEU A 194 B 2 3 N LEU A 195 ? N LEU A 195 O ARG A 258 ? O ARG A 258 B 3 4 O ARG A 253 ? O ARG A 253 N CYS A 239 ? N CYS A 239 B 4 5 O MET A 236 ? O MET A 236 N LEU A 228 ? N LEU A 228 C 1 2 N THR A 292 ? N THR A 292 O ARG A 299 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 6CF 401 ? 19 'BINDING SITE FOR RESIDUE 6CF A 401' AC2 Software A MN 402 ? 7 'BINDING SITE FOR RESIDUE MN A 402' AC3 Software A MN 403 ? 5 'BINDING SITE FOR RESIDUE MN A 403' AC4 Software A MN 404 ? 1 'BINDING SITE FOR RESIDUE MN A 404' AC5 Software A MN 405 ? 5 'BINDING SITE FOR RESIDUE MN A 405' AC6 Software A NA 406 ? 6 'BINDING SITE FOR RESIDUE NA A 406' AC7 Software T MN 101 ? 4 'BINDING SITE FOR RESIDUE MN T 101' AC8 Software P MN 101 ? 2 'BINDING SITE FOR RESIDUE MN P 101' AC9 Software D NA 101 ? 2 'BINDING SITE FOR RESIDUE NA D 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 GLY A 179 ? GLY A 179 . ? 1_555 ? 2 AC1 19 SER A 180 ? SER A 180 . ? 1_555 ? 3 AC1 19 ARG A 183 ? ARG A 183 . ? 1_555 ? 4 AC1 19 SER A 188 ? SER A 188 . ? 1_555 ? 5 AC1 19 GLY A 189 ? GLY A 189 . ? 1_555 ? 6 AC1 19 ASP A 190 ? ASP A 190 . ? 1_555 ? 7 AC1 19 ASP A 192 ? ASP A 192 . ? 1_555 ? 8 AC1 19 TYR A 271 ? TYR A 271 . ? 1_555 ? 9 AC1 19 PHE A 272 ? PHE A 272 . ? 1_555 ? 10 AC1 19 THR A 273 ? THR A 273 . ? 1_555 ? 11 AC1 19 GLY A 274 ? GLY A 274 . ? 1_555 ? 12 AC1 19 ASP A 276 ? ASP A 276 . ? 1_555 ? 13 AC1 19 ASN A 279 ? ASN A 279 . ? 1_555 ? 14 AC1 19 MN F . ? MN A 402 . ? 1_555 ? 15 AC1 19 MN G . ? MN A 403 . ? 1_555 ? 16 AC1 19 HOH O . ? HOH A 501 . ? 1_555 ? 17 AC1 19 HOH O . ? HOH A 502 . ? 1_555 ? 18 AC1 19 DA C 10 ? DA P 10 . ? 1_555 ? 19 AC1 19 8OG D 6 ? 8OG T 6 . ? 1_555 ? 20 AC2 7 ASP A 190 ? ASP A 190 . ? 1_555 ? 21 AC2 7 ASP A 192 ? ASP A 192 . ? 1_555 ? 22 AC2 7 ASP A 256 ? ASP A 256 . ? 1_555 ? 23 AC2 7 6CF E . ? 6CF A 401 . ? 1_555 ? 24 AC2 7 MN G . ? MN A 403 . ? 1_555 ? 25 AC2 7 HOH O . ? HOH A 502 . ? 1_555 ? 26 AC2 7 DA C 10 ? DA P 10 . ? 1_555 ? 27 AC3 5 ASP A 190 ? ASP A 190 . ? 1_555 ? 28 AC3 5 ASP A 192 ? ASP A 192 . ? 1_555 ? 29 AC3 5 6CF E . ? 6CF A 401 . ? 1_555 ? 30 AC3 5 MN F . ? MN A 402 . ? 1_555 ? 31 AC3 5 HOH O . ? HOH A 501 . ? 1_555 ? 32 AC4 1 HIS A 51 ? HIS A 51 . ? 1_555 ? 33 AC5 5 ASP A 124 ? ASP A 124 . ? 1_454 ? 34 AC5 5 ASP A 314 ? ASP A 314 . ? 1_555 ? 35 AC5 5 HOH O . ? HOH A 571 . ? 1_555 ? 36 AC5 5 HOH O . ? HOH A 572 . ? 1_555 ? 37 AC5 5 HOH O . ? HOH A 573 . ? 1_555 ? 38 AC6 6 THR A 101 ? THR A 101 . ? 1_555 ? 39 AC6 6 VAL A 103 ? VAL A 103 . ? 1_555 ? 40 AC6 6 ILE A 106 ? ILE A 106 . ? 1_555 ? 41 AC6 6 HOH O . ? HOH A 504 . ? 1_555 ? 42 AC6 6 DG C 9 ? DG P 9 . ? 1_555 ? 43 AC6 6 HOH Q . ? HOH P 202 . ? 1_555 ? 44 AC7 4 GLU A 172 ? GLU A 172 . ? 1_556 ? 45 AC7 4 DG D 3 ? DG T 3 . ? 1_555 ? 46 AC7 4 HOH R . ? HOH T 204 . ? 1_555 ? 47 AC7 4 HOH R . ? HOH T 214 . ? 1_555 ? 48 AC8 2 DG C 4 ? DG P 4 . ? 1_555 ? 49 AC8 2 HOH Q . ? HOH P 208 . ? 1_555 ? 50 AC9 2 DG B 4 ? DG D 4 . ? 1_555 ? 51 AC9 2 DG B 5 ? DG D 5 . ? 1_555 ? # _database_PDB_matrix.entry_id 4GXJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4GXJ _atom_sites.fract_transf_matrix[1][1] 0.018154 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008254 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012915 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019928 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F MN N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 ARG 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 ALA 6 6 ? ? ? A . n A 1 7 PRO 7 7 ? ? ? A . n A 1 8 GLN 8 8 ? ? ? A . n A 1 9 GLU 9 9 ? ? ? A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 HIS 134 134 134 HIS HIS A . n A 1 135 HIS 135 135 135 HIS HIS A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 TYR 142 142 142 TYR TYR A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 MET 155 155 155 MET MET A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 MET 158 158 158 MET MET A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 LYS 168 168 168 LYS LYS A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 TYR 173 173 173 TYR TYR A . n A 1 174 ILE 174 174 174 ILE ILE A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 CYS 178 178 178 CYS CYS A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 MET 191 191 191 MET MET A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 HIS 197 197 197 HIS HIS A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 THR 201 201 201 THR THR A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 SER 204 204 204 SER SER A . n A 1 205 THR 205 205 ? ? ? A . n A 1 206 LYS 206 206 ? ? ? A . n A 1 207 GLN 207 207 ? ? ? A . n A 1 208 PRO 208 208 ? ? ? A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 HIS 212 212 212 HIS HIS A . n A 1 213 GLN 213 213 213 GLN GLN A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 VAL 215 215 215 VAL VAL A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 HIS 222 222 222 HIS HIS A . n A 1 223 PHE 223 223 223 PHE PHE A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 SER 229 229 229 SER SER A . n A 1 230 LYS 230 230 230 LYS LYS A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 THR 233 233 233 THR THR A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 MET 236 236 236 MET MET A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 CYS 239 239 239 CYS CYS A . n A 1 240 GLN 240 240 240 GLN GLN A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 PRO 242 242 242 PRO PRO A . n A 1 243 SER 243 243 243 SER SER A . n A 1 244 LYS 244 244 244 LYS LYS A . n A 1 245 ASN 245 245 245 ASN ASN A . n A 1 246 ASP 246 246 246 ASP ASP A . n A 1 247 GLU 247 247 ? ? ? A . n A 1 248 LYS 248 248 ? ? ? A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 TYR 250 250 250 TYR TYR A . n A 1 251 PRO 251 251 251 PRO PRO A . n A 1 252 HIS 252 252 252 HIS HIS A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 ARG 254 254 254 ARG ARG A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 ILE 257 257 257 ILE ILE A . n A 1 258 ARG 258 258 258 ARG ARG A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 ILE 260 260 260 ILE ILE A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 LYS 262 262 262 LYS LYS A . n A 1 263 ASP 263 263 263 ASP ASP A . n A 1 264 GLN 264 264 264 GLN GLN A . n A 1 265 TYR 265 265 265 TYR TYR A . n A 1 266 TYR 266 266 266 TYR TYR A . n A 1 267 CYS 267 267 267 CYS CYS A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 VAL 269 269 269 VAL VAL A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 TYR 271 271 271 TYR TYR A . n A 1 272 PHE 272 272 272 PHE PHE A . n A 1 273 THR 273 273 273 THR THR A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 SER 275 275 275 SER SER A . n A 1 276 ASP 276 276 276 ASP ASP A . n A 1 277 ILE 277 277 277 ILE ILE A . n A 1 278 PHE 278 278 278 PHE PHE A . n A 1 279 ASN 279 279 279 ASN ASN A . n A 1 280 LYS 280 280 280 LYS LYS A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 MET 282 282 282 MET MET A . n A 1 283 LYS 283 283 283 LYS LYS A . n A 1 284 ALA 284 284 284 ALA ALA A . n A 1 285 HIS 285 285 285 HIS HIS A . n A 1 286 ALA 286 286 286 ALA ALA A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 LYS 289 289 289 LYS LYS A . n A 1 290 GLY 290 290 290 GLY GLY A . n A 1 291 PHE 291 291 291 PHE PHE A . n A 1 292 THR 292 292 292 THR THR A . n A 1 293 ILE 293 293 293 ILE ILE A . n A 1 294 ASN 294 294 294 ASN ASN A . n A 1 295 GLU 295 295 295 GLU GLU A . n A 1 296 TYR 296 296 296 TYR TYR A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 ILE 298 298 298 ILE ILE A . n A 1 299 ARG 299 299 299 ARG ARG A . n A 1 300 PRO 300 300 300 PRO PRO A . n A 1 301 LEU 301 301 301 LEU LEU A . n A 1 302 GLY 302 302 ? ? ? A . n A 1 303 VAL 303 303 ? ? ? A . n A 1 304 THR 304 304 ? ? ? A . n A 1 305 GLY 305 305 ? ? ? A . n A 1 306 VAL 306 306 ? ? ? A . n A 1 307 ALA 307 307 307 ALA ALA A . n A 1 308 GLY 308 308 308 GLY GLY A . n A 1 309 GLU 309 309 309 GLU GLU A . n A 1 310 PRO 310 310 310 PRO PRO A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 PRO 312 312 312 PRO PRO A . n A 1 313 VAL 313 313 313 VAL VAL A . n A 1 314 ASP 314 314 314 ASP ASP A . n A 1 315 SER 315 315 315 SER SER A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 LYS 317 317 317 LYS LYS A . n A 1 318 ASP 318 318 318 ASP ASP A . n A 1 319 ILE 319 319 319 ILE ILE A . n A 1 320 PHE 320 320 320 PHE PHE A . n A 1 321 ASP 321 321 321 ASP ASP A . n A 1 322 TYR 322 322 322 TYR TYR A . n A 1 323 ILE 323 323 323 ILE ILE A . n A 1 324 GLN 324 324 324 GLN GLN A . n A 1 325 TRP 325 325 325 TRP TRP A . n A 1 326 LYS 326 326 326 LYS LYS A . n A 1 327 TYR 327 327 327 TYR TYR A . n A 1 328 ARG 328 328 328 ARG ARG A . n A 1 329 GLU 329 329 329 GLU GLU A . n A 1 330 PRO 330 330 330 PRO PRO A . n A 1 331 LYS 331 331 331 LYS LYS A . n A 1 332 ASP 332 332 332 ASP ASP A . n A 1 333 ARG 333 333 333 ARG ARG A . n A 1 334 SER 334 334 334 SER SER A . n A 1 335 GLU 335 335 335 GLU GLU A . n B 2 1 DG 1 1 1 DG DG D . n B 2 2 DT 2 2 2 DT DT D . n B 2 3 DC 3 3 3 DC DC D . n B 2 4 DG 4 4 4 DG DG D . n B 2 5 DG 5 5 5 DG DG D . n C 3 1 DG 1 1 1 DG DG P . n C 3 2 DC 2 2 2 DC DC P . n C 3 3 DT 3 3 3 DT DT P . n C 3 4 DG 4 4 4 DG DG P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DT 6 6 6 DT DT P . n C 3 7 DG 7 7 7 DG DG P . n C 3 8 DC 8 8 8 DC DC P . n C 3 9 DG 9 9 9 DG DG P . n C 3 10 DA 10 10 10 DA DA P . n D 4 1 DC 1 1 1 DC DC T . n D 4 2 DC 2 2 2 DC DC T . n D 4 3 DG 3 3 3 DG DG T . n D 4 4 DA 4 4 4 DA DA T . n D 4 5 DC 5 5 5 DC DC T . n D 4 6 8OG 6 6 6 8OG 8OG T . n D 4 7 DT 7 7 7 DT DT T . n D 4 8 DC 8 8 8 DC DC T . n D 4 9 DG 9 9 9 DG DG T . n D 4 10 DC 10 10 10 DC DC T . n D 4 11 DA 11 11 11 DA DA T . n D 4 12 DT 12 12 12 DT DT T . n D 4 13 DC 13 13 13 DC DC T . n D 4 14 DA 14 14 14 DA DA T . n D 4 15 DG 15 15 15 DG DG T . n D 4 16 DC 16 16 16 DC DC T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 6CF 1 401 338 6CF CTF A . F 6 MN 1 402 1 MN MN A . G 6 MN 1 403 2 MN MN A . H 6 MN 1 404 6 MN MN A . I 6 MN 1 405 7 MN MN A . J 7 NA 1 406 1 NA NA A . K 7 NA 1 101 2 NA NA D . L 6 MN 1 101 3 MN MN P . M 6 MN 1 101 4 MN MN T . N 6 MN 1 102 5 MN MN T . O 8 HOH 1 501 1 HOH HOH A . O 8 HOH 2 502 2 HOH HOH A . O 8 HOH 3 503 5 HOH HOH A . O 8 HOH 4 504 6 HOH HOH A . O 8 HOH 5 505 9 HOH HOH A . O 8 HOH 6 506 11 HOH HOH A . O 8 HOH 7 507 12 HOH HOH A . O 8 HOH 8 508 13 HOH HOH A . O 8 HOH 9 509 15 HOH HOH A . O 8 HOH 10 510 18 HOH HOH A . O 8 HOH 11 511 19 HOH HOH A . O 8 HOH 12 512 20 HOH HOH A . O 8 HOH 13 513 21 HOH HOH A . O 8 HOH 14 514 22 HOH HOH A . O 8 HOH 15 515 24 HOH HOH A . O 8 HOH 16 516 26 HOH HOH A . O 8 HOH 17 517 27 HOH HOH A . O 8 HOH 18 518 28 HOH HOH A . O 8 HOH 19 519 30 HOH HOH A . O 8 HOH 20 520 31 HOH HOH A . O 8 HOH 21 521 32 HOH HOH A . O 8 HOH 22 522 34 HOH HOH A . O 8 HOH 23 523 35 HOH HOH A . O 8 HOH 24 524 37 HOH HOH A . O 8 HOH 25 525 38 HOH HOH A . O 8 HOH 26 526 40 HOH HOH A . O 8 HOH 27 527 42 HOH HOH A . O 8 HOH 28 528 43 HOH HOH A . O 8 HOH 29 529 44 HOH HOH A . O 8 HOH 30 530 46 HOH HOH A . O 8 HOH 31 531 47 HOH HOH A . O 8 HOH 32 532 50 HOH HOH A . O 8 HOH 33 533 52 HOH HOH A . O 8 HOH 34 534 53 HOH HOH A . O 8 HOH 35 535 55 HOH HOH A . O 8 HOH 36 536 56 HOH HOH A . O 8 HOH 37 537 57 HOH HOH A . O 8 HOH 38 538 58 HOH HOH A . O 8 HOH 39 539 61 HOH HOH A . O 8 HOH 40 540 62 HOH HOH A . O 8 HOH 41 541 63 HOH HOH A . O 8 HOH 42 542 64 HOH HOH A . O 8 HOH 43 543 65 HOH HOH A . O 8 HOH 44 544 66 HOH HOH A . O 8 HOH 45 545 67 HOH HOH A . O 8 HOH 46 546 68 HOH HOH A . O 8 HOH 47 547 70 HOH HOH A . O 8 HOH 48 548 71 HOH HOH A . O 8 HOH 49 549 72 HOH HOH A . O 8 HOH 50 550 73 HOH HOH A . O 8 HOH 51 551 75 HOH HOH A . O 8 HOH 52 552 76 HOH HOH A . O 8 HOH 53 553 80 HOH HOH A . O 8 HOH 54 554 81 HOH HOH A . O 8 HOH 55 555 82 HOH HOH A . O 8 HOH 56 556 83 HOH HOH A . O 8 HOH 57 557 84 HOH HOH A . O 8 HOH 58 558 85 HOH HOH A . O 8 HOH 59 559 86 HOH HOH A . O 8 HOH 60 560 88 HOH HOH A . O 8 HOH 61 561 89 HOH HOH A . O 8 HOH 62 562 90 HOH HOH A . O 8 HOH 63 563 91 HOH HOH A . O 8 HOH 64 564 93 HOH HOH A . O 8 HOH 65 565 96 HOH HOH A . O 8 HOH 66 566 97 HOH HOH A . O 8 HOH 67 567 98 HOH HOH A . O 8 HOH 68 568 99 HOH HOH A . O 8 HOH 69 569 103 HOH HOH A . O 8 HOH 70 570 108 HOH HOH A . O 8 HOH 71 571 110 HOH HOH A . O 8 HOH 72 572 111 HOH HOH A . O 8 HOH 73 573 112 HOH HOH A . P 8 HOH 1 201 14 HOH HOH D . P 8 HOH 2 202 48 HOH HOH D . P 8 HOH 3 203 59 HOH HOH D . P 8 HOH 4 204 78 HOH HOH D . Q 8 HOH 1 201 4 HOH HOH P . Q 8 HOH 2 202 10 HOH HOH P . Q 8 HOH 3 203 23 HOH HOH P . Q 8 HOH 4 204 39 HOH HOH P . Q 8 HOH 5 205 41 HOH HOH P . Q 8 HOH 6 206 45 HOH HOH P . Q 8 HOH 7 207 54 HOH HOH P . Q 8 HOH 8 208 60 HOH HOH P . Q 8 HOH 9 209 87 HOH HOH P . Q 8 HOH 10 210 95 HOH HOH P . R 8 HOH 1 201 8 HOH HOH T . R 8 HOH 2 202 16 HOH HOH T . R 8 HOH 3 203 17 HOH HOH T . R 8 HOH 4 204 25 HOH HOH T . R 8 HOH 5 205 29 HOH HOH T . R 8 HOH 6 206 33 HOH HOH T . R 8 HOH 7 207 49 HOH HOH T . R 8 HOH 8 208 51 HOH HOH T . R 8 HOH 9 209 74 HOH HOH T . R 8 HOH 10 210 77 HOH HOH T . R 8 HOH 11 211 79 HOH HOH T . R 8 HOH 12 212 92 HOH HOH T . R 8 HOH 13 213 94 HOH HOH T . R 8 HOH 14 214 115 HOH HOH T . R 8 HOH 15 215 116 HOH HOH T . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id D _pdbx_struct_mod_residue.label_comp_id 8OG _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id T _pdbx_struct_mod_residue.auth_comp_id 8OG _pdbx_struct_mod_residue.auth_seq_id 6 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6280 ? 1 MORE -77 ? 1 'SSA (A^2)' 18960 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A THR 101 ? A THR 101 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? A VAL 103 ? A VAL 103 ? 1_555 94.0 ? 2 O ? A THR 101 ? A THR 101 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 94.3 ? 3 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 87.6 ? 4 O ? A THR 101 ? A THR 101 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? O HOH . ? A HOH 504 ? 1_555 79.4 ? 5 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? O HOH . ? A HOH 504 ? 1_555 86.0 ? 6 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? O HOH . ? A HOH 504 ? 1_555 170.7 ? 7 O ? A THR 101 ? A THR 101 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 161.1 ? 8 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 93.5 ? 9 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 103.2 ? 10 O ? O HOH . ? A HOH 504 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 83.9 ? 11 O ? A THR 101 ? A THR 101 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? Q HOH . ? P HOH 202 ? 1_555 79.3 ? 12 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? Q HOH . ? P HOH 202 ? 1_555 172.6 ? 13 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? Q HOH . ? P HOH 202 ? 1_555 96.0 ? 14 O ? O HOH . ? A HOH 504 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? Q HOH . ? P HOH 202 ? 1_555 89.7 ? 15 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? Q HOH . ? P HOH 202 ? 1_555 92.0 ? 16 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 101.3 ? 17 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 90.7 ? 18 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 99.3 ? 19 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O2A ? E 6CF . ? A 6CF 401 ? 1_555 90.7 ? 20 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O2A ? E 6CF . ? A 6CF 401 ? 1_555 90.5 ? 21 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O2A ? E 6CF . ? A 6CF 401 ? 1_555 169.6 ? 22 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? O HOH . ? A HOH 502 ? 1_555 79.9 ? 23 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? O HOH . ? A HOH 502 ? 1_555 173.8 ? 24 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? O HOH . ? A HOH 502 ? 1_555 86.7 ? 25 O2A ? E 6CF . ? A 6CF 401 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? O HOH . ? A HOH 502 ? 1_555 83.4 ? 26 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 "O3'" ? C DA 10 ? P DA 10 ? 1_555 159.9 ? 27 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 "O3'" ? C DA 10 ? P DA 10 ? 1_555 97.6 ? 28 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 "O3'" ? C DA 10 ? P DA 10 ? 1_555 92.5 ? 29 O2A ? E 6CF . ? A 6CF 401 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 "O3'" ? C DA 10 ? P DA 10 ? 1_555 82.7 ? 30 O ? O HOH . ? A HOH 502 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 "O3'" ? C DA 10 ? P DA 10 ? 1_555 80.6 ? 31 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 96.8 ? 32 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O1B ? E 6CF . ? A 6CF 401 ? 1_555 163.3 ? 33 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O1B ? E 6CF . ? A 6CF 401 ? 1_555 85.6 ? 34 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2A ? E 6CF . ? A 6CF 401 ? 1_555 107.4 ? 35 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2A ? E 6CF . ? A 6CF 401 ? 1_555 90.0 ? 36 O1B ? E 6CF . ? A 6CF 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2A ? E 6CF . ? A 6CF 401 ? 1_555 89.2 ? 37 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2G ? E 6CF . ? A 6CF 401 ? 1_555 86.6 ? 38 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2G ? E 6CF . ? A 6CF 401 ? 1_555 169.4 ? 39 O1B ? E 6CF . ? A 6CF 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2G ? E 6CF . ? A 6CF 401 ? 1_555 88.3 ? 40 O2A ? E 6CF . ? A 6CF 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2G ? E 6CF . ? A 6CF 401 ? 1_555 98.6 ? 41 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? O HOH . ? A HOH 501 ? 1_555 74.8 ? 42 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? O HOH . ? A HOH 501 ? 1_555 76.3 ? 43 O1B ? E 6CF . ? A 6CF 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? O HOH . ? A HOH 501 ? 1_555 89.8 ? 44 O2A ? E 6CF . ? A 6CF 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? O HOH . ? A HOH 501 ? 1_555 166.3 ? 45 O2G ? E 6CF . ? A 6CF 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? O HOH . ? A HOH 501 ? 1_555 95.0 ? 46 OD2 ? A ASP 314 ? A ASP 314 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O ? O HOH . ? A HOH 571 ? 1_555 101.7 ? 47 OD2 ? A ASP 314 ? A ASP 314 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O ? O HOH . ? A HOH 572 ? 1_555 102.8 ? 48 O ? O HOH . ? A HOH 571 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O ? O HOH . ? A HOH 572 ? 1_555 155.3 ? 49 OD2 ? A ASP 314 ? A ASP 314 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O ? O HOH . ? A HOH 573 ? 1_555 163.9 ? 50 O ? O HOH . ? A HOH 571 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O ? O HOH . ? A HOH 573 ? 1_555 65.3 ? 51 O ? O HOH . ? A HOH 572 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O ? O HOH . ? A HOH 573 ? 1_555 90.9 ? 52 N7 ? C DG 4 ? P DG 4 ? 1_555 MN ? L MN . ? P MN 101 ? 1_555 O ? Q HOH . ? P HOH 208 ? 1_555 97.2 ? 53 N7 ? D DG 3 ? T DG 3 ? 1_555 MN ? M MN . ? T MN 101 ? 1_555 O ? R HOH . ? T HOH 204 ? 1_555 87.4 ? 54 N7 ? D DG 3 ? T DG 3 ? 1_555 MN ? M MN . ? T MN 101 ? 1_555 O ? R HOH . ? T HOH 214 ? 1_555 90.0 ? 55 O ? R HOH . ? T HOH 204 ? 1_555 MN ? M MN . ? T MN 101 ? 1_555 O ? R HOH . ? T HOH 214 ? 1_555 85.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-01-16 2 'Structure model' 1 1 2013-02-27 3 'Structure model' 1 2 2019-07-17 4 'Structure model' 1 3 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' Advisory 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Derived calculations' 10 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 3 'Structure model' software 3 3 'Structure model' struct_conn 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model 8 4 'Structure model' pdbx_struct_conn_angle 9 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 10 4 'Structure model' struct_conn 11 4 'Structure model' struct_conn_type 12 4 'Structure model' struct_ref_seq_dif 13 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 3 'Structure model' '_software.version' 4 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.value' 28 4 'Structure model' '_struct_conn.conn_type_id' 29 4 'Structure model' '_struct_conn.id' 30 4 'Structure model' '_struct_conn.pdbx_dist_value' 31 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 32 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 33 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 38 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 39 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 40 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 41 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 42 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 43 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 44 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 45 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 46 4 'Structure model' '_struct_conn_type.id' 47 4 'Structure model' '_struct_ref_seq_dif.details' 48 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 49 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 50 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(phenix.refine: 1.7_650)' ? 1 CNS refinement . ? 2 StructureStudio 'data collection' . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 CNS phasing . ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 145 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 546 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" T 8OG 6 ? ? P T DT 7 ? ? "O5'" T DT 7 ? ? 87.14 104.00 -16.86 1.90 Y 2 1 OP1 T DT 7 ? ? P T DT 7 ? ? OP2 T DT 7 ? ? 129.61 119.60 10.01 1.50 N 3 1 P T DT 7 ? ? "O5'" T DT 7 ? ? "C5'" T DT 7 ? ? 133.37 120.90 12.47 1.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 29 ? ? -91.72 -63.25 2 1 ASP A 170 ? ? -173.38 124.34 3 1 CYS A 178 ? ? -119.06 -153.35 4 1 HIS A 285 ? ? -68.25 15.71 5 1 ASP A 314 ? ? -145.26 -8.35 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 244 ? CG ? A LYS 244 CG 2 1 Y 1 A LYS 244 ? CD ? A LYS 244 CD 3 1 Y 1 A LYS 244 ? CE ? A LYS 244 CE 4 1 Y 1 A LYS 244 ? NZ ? A LYS 244 NZ 5 1 Y 1 A ASN 245 ? CG ? A ASN 245 CG 6 1 Y 1 A ASN 245 ? OD1 ? A ASN 245 OD1 7 1 Y 1 A ASN 245 ? ND2 ? A ASN 245 ND2 8 1 Y 1 A ASP 246 ? CG ? A ASP 246 CG 9 1 Y 1 A ASP 246 ? OD1 ? A ASP 246 OD1 10 1 Y 1 A ASP 246 ? OD2 ? A ASP 246 OD2 11 1 Y 0 A TYR 296 ? N B A TYR 296 N 12 1 Y 0 A TYR 296 ? CA B A TYR 296 CA 13 1 Y 0 A TYR 296 ? C B A TYR 296 C 14 1 Y 0 A TYR 296 ? O B A TYR 296 O 15 1 Y 0 A TYR 296 ? CB B A TYR 296 CB 16 1 Y 0 A TYR 296 ? CG B A TYR 296 CG 17 1 Y 0 A TYR 296 ? CD1 B A TYR 296 CD1 18 1 Y 0 A TYR 296 ? CD2 B A TYR 296 CD2 19 1 Y 0 A TYR 296 ? CE1 B A TYR 296 CE1 20 1 Y 0 A TYR 296 ? CE2 B A TYR 296 CE2 21 1 Y 0 A TYR 296 ? CZ B A TYR 296 CZ 22 1 Y 0 A TYR 296 ? OH B A TYR 296 OH 23 1 Y 1 A GLN 324 ? CG ? A GLN 324 CG 24 1 Y 1 A GLN 324 ? CD ? A GLN 324 CD 25 1 Y 1 A GLN 324 ? OE1 ? A GLN 324 OE1 26 1 Y 1 A GLN 324 ? NE2 ? A GLN 324 NE2 27 1 Y 1 A LYS 326 ? CG ? A LYS 326 CG 28 1 Y 1 A LYS 326 ? CD ? A LYS 326 CD 29 1 Y 1 A LYS 326 ? CE ? A LYS 326 CE 30 1 Y 1 A LYS 326 ? NZ ? A LYS 326 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A ARG 4 ? A ARG 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A ALA 6 ? A ALA 6 7 1 Y 1 A PRO 7 ? A PRO 7 8 1 Y 1 A GLN 8 ? A GLN 8 9 1 Y 1 A GLU 9 ? A GLU 9 10 1 Y 1 A THR 205 ? A THR 205 11 1 Y 1 A LYS 206 ? A LYS 206 12 1 Y 1 A GLN 207 ? A GLN 207 13 1 Y 1 A PRO 208 ? A PRO 208 14 1 Y 1 A GLU 247 ? A GLU 247 15 1 Y 1 A LYS 248 ? A LYS 248 16 1 Y 1 A GLY 302 ? A GLY 302 17 1 Y 1 A VAL 303 ? A VAL 303 18 1 Y 1 A THR 304 ? A THR 304 19 1 Y 1 A GLY 305 ? A GLY 305 20 1 Y 1 A VAL 306 ? A VAL 306 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 6CF N1 N N N 1 6CF P1 P N N 2 6CF C2 C N N 3 6CF O2 O N N 4 6CF P2 P N N 5 6CF N3 N N N 6 6CF P3 P N N 7 6CF C4 C N N 8 6CF N4 N N N 9 6CF C5 C N N 10 6CF C6 C N N 11 6CF "C1'" C N R 12 6CF F1A F N N 13 6CF O1A O N N 14 6CF O1B O N N 15 6CF O1G O N N 16 6CF "C2'" C N N 17 6CF F2A F N N 18 6CF O2A O N N 19 6CF O2B O N N 20 6CF O2G O N N 21 6CF "C3'" C N S 22 6CF "O3'" O N N 23 6CF C3A C N N 24 6CF O3B O N N 25 6CF O3G O N N 26 6CF "C4'" C N R 27 6CF "O4'" O N N 28 6CF "C5'" C N N 29 6CF "O5'" O N N 30 6CF HN4 H N N 31 6CF HN4A H N N 32 6CF H5 H N N 33 6CF H6 H N N 34 6CF "H1'" H N N 35 6CF HO1A H N N 36 6CF HO1G H N N 37 6CF "H2'" H N N 38 6CF "H2'A" H N N 39 6CF HO2B H N N 40 6CF HO2G H N N 41 6CF "H3'" H N N 42 6CF "HO3'" H N N 43 6CF "H4'" H N N 44 6CF "H5'" H N N 45 6CF "H5'A" H N N 46 8OG OP3 O N N 47 8OG P P N N 48 8OG OP1 O N N 49 8OG OP2 O N N 50 8OG "O5'" O N N 51 8OG "C5'" C N N 52 8OG "C4'" C N R 53 8OG "O4'" O N N 54 8OG "C3'" C N S 55 8OG "O3'" O N N 56 8OG "C2'" C N N 57 8OG "C1'" C N R 58 8OG N9 N N N 59 8OG C8 C N N 60 8OG N7 N N N 61 8OG C5 C N N 62 8OG C6 C N N 63 8OG O6 O N N 64 8OG N1 N N N 65 8OG C2 C N N 66 8OG N2 N N N 67 8OG N3 N N N 68 8OG C4 C N N 69 8OG O8 O N N 70 8OG HOP3 H N N 71 8OG HOP2 H N N 72 8OG "H5'" H N N 73 8OG "H5''" H N N 74 8OG "H4'" H N N 75 8OG "H3'" H N N 76 8OG "HO3'" H N N 77 8OG "H2'" H N N 78 8OG "H2''" H N N 79 8OG "H1'" H N N 80 8OG H7 H N N 81 8OG H1 H N N 82 8OG H21 H N N 83 8OG H22 H N N 84 ALA N N N N 85 ALA CA C N S 86 ALA C C N N 87 ALA O O N N 88 ALA CB C N N 89 ALA OXT O N N 90 ALA H H N N 91 ALA H2 H N N 92 ALA HA H N N 93 ALA HB1 H N N 94 ALA HB2 H N N 95 ALA HB3 H N N 96 ALA HXT H N N 97 ARG N N N N 98 ARG CA C N S 99 ARG C C N N 100 ARG O O N N 101 ARG CB C N N 102 ARG CG C N N 103 ARG CD C N N 104 ARG NE N N N 105 ARG CZ C N N 106 ARG NH1 N N N 107 ARG NH2 N N N 108 ARG OXT O N N 109 ARG H H N N 110 ARG H2 H N N 111 ARG HA H N N 112 ARG HB2 H N N 113 ARG HB3 H N N 114 ARG HG2 H N N 115 ARG HG3 H N N 116 ARG HD2 H N N 117 ARG HD3 H N N 118 ARG HE H N N 119 ARG HH11 H N N 120 ARG HH12 H N N 121 ARG HH21 H N N 122 ARG HH22 H N N 123 ARG HXT H N N 124 ASN N N N N 125 ASN CA C N S 126 ASN C C N N 127 ASN O O N N 128 ASN CB C N N 129 ASN CG C N N 130 ASN OD1 O N N 131 ASN ND2 N N N 132 ASN OXT O N N 133 ASN H H N N 134 ASN H2 H N N 135 ASN HA H N N 136 ASN HB2 H N N 137 ASN HB3 H N N 138 ASN HD21 H N N 139 ASN HD22 H N N 140 ASN HXT H N N 141 ASP N N N N 142 ASP CA C N S 143 ASP C C N N 144 ASP O O N N 145 ASP CB C N N 146 ASP CG C N N 147 ASP OD1 O N N 148 ASP OD2 O N N 149 ASP OXT O N N 150 ASP H H N N 151 ASP H2 H N N 152 ASP HA H N N 153 ASP HB2 H N N 154 ASP HB3 H N N 155 ASP HD2 H N N 156 ASP HXT H N N 157 CYS N N N N 158 CYS CA C N R 159 CYS C C N N 160 CYS O O N N 161 CYS CB C N N 162 CYS SG S N N 163 CYS OXT O N N 164 CYS H H N N 165 CYS H2 H N N 166 CYS HA H N N 167 CYS HB2 H N N 168 CYS HB3 H N N 169 CYS HG H N N 170 CYS HXT H N N 171 DA OP3 O N N 172 DA P P N N 173 DA OP1 O N N 174 DA OP2 O N N 175 DA "O5'" O N N 176 DA "C5'" C N N 177 DA "C4'" C N R 178 DA "O4'" O N N 179 DA "C3'" C N S 180 DA "O3'" O N N 181 DA "C2'" C N N 182 DA "C1'" C N R 183 DA N9 N Y N 184 DA C8 C Y N 185 DA N7 N Y N 186 DA C5 C Y N 187 DA C6 C Y N 188 DA N6 N N N 189 DA N1 N Y N 190 DA C2 C Y N 191 DA N3 N Y N 192 DA C4 C Y N 193 DA HOP3 H N N 194 DA HOP2 H N N 195 DA "H5'" H N N 196 DA "H5''" H N N 197 DA "H4'" H N N 198 DA "H3'" H N N 199 DA "HO3'" H N N 200 DA "H2'" H N N 201 DA "H2''" H N N 202 DA "H1'" H N N 203 DA H8 H N N 204 DA H61 H N N 205 DA H62 H N N 206 DA H2 H N N 207 DC OP3 O N N 208 DC P P N N 209 DC OP1 O N N 210 DC OP2 O N N 211 DC "O5'" O N N 212 DC "C5'" C N N 213 DC "C4'" C N R 214 DC "O4'" O N N 215 DC "C3'" C N S 216 DC "O3'" O N N 217 DC "C2'" C N N 218 DC "C1'" C N R 219 DC N1 N N N 220 DC C2 C N N 221 DC O2 O N N 222 DC N3 N N N 223 DC C4 C N N 224 DC N4 N N N 225 DC C5 C N N 226 DC C6 C N N 227 DC HOP3 H N N 228 DC HOP2 H N N 229 DC "H5'" H N N 230 DC "H5''" H N N 231 DC "H4'" H N N 232 DC "H3'" H N N 233 DC "HO3'" H N N 234 DC "H2'" H N N 235 DC "H2''" H N N 236 DC "H1'" H N N 237 DC H41 H N N 238 DC H42 H N N 239 DC H5 H N N 240 DC H6 H N N 241 DG OP3 O N N 242 DG P P N N 243 DG OP1 O N N 244 DG OP2 O N N 245 DG "O5'" O N N 246 DG "C5'" C N N 247 DG "C4'" C N R 248 DG "O4'" O N N 249 DG "C3'" C N S 250 DG "O3'" O N N 251 DG "C2'" C N N 252 DG "C1'" C N R 253 DG N9 N Y N 254 DG C8 C Y N 255 DG N7 N Y N 256 DG C5 C Y N 257 DG C6 C N N 258 DG O6 O N N 259 DG N1 N N N 260 DG C2 C N N 261 DG N2 N N N 262 DG N3 N N N 263 DG C4 C Y N 264 DG HOP3 H N N 265 DG HOP2 H N N 266 DG "H5'" H N N 267 DG "H5''" H N N 268 DG "H4'" H N N 269 DG "H3'" H N N 270 DG "HO3'" H N N 271 DG "H2'" H N N 272 DG "H2''" H N N 273 DG "H1'" H N N 274 DG H8 H N N 275 DG H1 H N N 276 DG H21 H N N 277 DG H22 H N N 278 DT OP3 O N N 279 DT P P N N 280 DT OP1 O N N 281 DT OP2 O N N 282 DT "O5'" O N N 283 DT "C5'" C N N 284 DT "C4'" C N R 285 DT "O4'" O N N 286 DT "C3'" C N S 287 DT "O3'" O N N 288 DT "C2'" C N N 289 DT "C1'" C N R 290 DT N1 N N N 291 DT C2 C N N 292 DT O2 O N N 293 DT N3 N N N 294 DT C4 C N N 295 DT O4 O N N 296 DT C5 C N N 297 DT C7 C N N 298 DT C6 C N N 299 DT HOP3 H N N 300 DT HOP2 H N N 301 DT "H5'" H N N 302 DT "H5''" H N N 303 DT "H4'" H N N 304 DT "H3'" H N N 305 DT "HO3'" H N N 306 DT "H2'" H N N 307 DT "H2''" H N N 308 DT "H1'" H N N 309 DT H3 H N N 310 DT H71 H N N 311 DT H72 H N N 312 DT H73 H N N 313 DT H6 H N N 314 GLN N N N N 315 GLN CA C N S 316 GLN C C N N 317 GLN O O N N 318 GLN CB C N N 319 GLN CG C N N 320 GLN CD C N N 321 GLN OE1 O N N 322 GLN NE2 N N N 323 GLN OXT O N N 324 GLN H H N N 325 GLN H2 H N N 326 GLN HA H N N 327 GLN HB2 H N N 328 GLN HB3 H N N 329 GLN HG2 H N N 330 GLN HG3 H N N 331 GLN HE21 H N N 332 GLN HE22 H N N 333 GLN HXT H N N 334 GLU N N N N 335 GLU CA C N S 336 GLU C C N N 337 GLU O O N N 338 GLU CB C N N 339 GLU CG C N N 340 GLU CD C N N 341 GLU OE1 O N N 342 GLU OE2 O N N 343 GLU OXT O N N 344 GLU H H N N 345 GLU H2 H N N 346 GLU HA H N N 347 GLU HB2 H N N 348 GLU HB3 H N N 349 GLU HG2 H N N 350 GLU HG3 H N N 351 GLU HE2 H N N 352 GLU HXT H N N 353 GLY N N N N 354 GLY CA C N N 355 GLY C C N N 356 GLY O O N N 357 GLY OXT O N N 358 GLY H H N N 359 GLY H2 H N N 360 GLY HA2 H N N 361 GLY HA3 H N N 362 GLY HXT H N N 363 HIS N N N N 364 HIS CA C N S 365 HIS C C N N 366 HIS O O N N 367 HIS CB C N N 368 HIS CG C Y N 369 HIS ND1 N Y N 370 HIS CD2 C Y N 371 HIS CE1 C Y N 372 HIS NE2 N Y N 373 HIS OXT O N N 374 HIS H H N N 375 HIS H2 H N N 376 HIS HA H N N 377 HIS HB2 H N N 378 HIS HB3 H N N 379 HIS HD1 H N N 380 HIS HD2 H N N 381 HIS HE1 H N N 382 HIS HE2 H N N 383 HIS HXT H N N 384 HOH O O N N 385 HOH H1 H N N 386 HOH H2 H N N 387 ILE N N N N 388 ILE CA C N S 389 ILE C C N N 390 ILE O O N N 391 ILE CB C N S 392 ILE CG1 C N N 393 ILE CG2 C N N 394 ILE CD1 C N N 395 ILE OXT O N N 396 ILE H H N N 397 ILE H2 H N N 398 ILE HA H N N 399 ILE HB H N N 400 ILE HG12 H N N 401 ILE HG13 H N N 402 ILE HG21 H N N 403 ILE HG22 H N N 404 ILE HG23 H N N 405 ILE HD11 H N N 406 ILE HD12 H N N 407 ILE HD13 H N N 408 ILE HXT H N N 409 LEU N N N N 410 LEU CA C N S 411 LEU C C N N 412 LEU O O N N 413 LEU CB C N N 414 LEU CG C N N 415 LEU CD1 C N N 416 LEU CD2 C N N 417 LEU OXT O N N 418 LEU H H N N 419 LEU H2 H N N 420 LEU HA H N N 421 LEU HB2 H N N 422 LEU HB3 H N N 423 LEU HG H N N 424 LEU HD11 H N N 425 LEU HD12 H N N 426 LEU HD13 H N N 427 LEU HD21 H N N 428 LEU HD22 H N N 429 LEU HD23 H N N 430 LEU HXT H N N 431 LYS N N N N 432 LYS CA C N S 433 LYS C C N N 434 LYS O O N N 435 LYS CB C N N 436 LYS CG C N N 437 LYS CD C N N 438 LYS CE C N N 439 LYS NZ N N N 440 LYS OXT O N N 441 LYS H H N N 442 LYS H2 H N N 443 LYS HA H N N 444 LYS HB2 H N N 445 LYS HB3 H N N 446 LYS HG2 H N N 447 LYS HG3 H N N 448 LYS HD2 H N N 449 LYS HD3 H N N 450 LYS HE2 H N N 451 LYS HE3 H N N 452 LYS HZ1 H N N 453 LYS HZ2 H N N 454 LYS HZ3 H N N 455 LYS HXT H N N 456 MET N N N N 457 MET CA C N S 458 MET C C N N 459 MET O O N N 460 MET CB C N N 461 MET CG C N N 462 MET SD S N N 463 MET CE C N N 464 MET OXT O N N 465 MET H H N N 466 MET H2 H N N 467 MET HA H N N 468 MET HB2 H N N 469 MET HB3 H N N 470 MET HG2 H N N 471 MET HG3 H N N 472 MET HE1 H N N 473 MET HE2 H N N 474 MET HE3 H N N 475 MET HXT H N N 476 MN MN MN N N 477 NA NA NA N N 478 PHE N N N N 479 PHE CA C N S 480 PHE C C N N 481 PHE O O N N 482 PHE CB C N N 483 PHE CG C Y N 484 PHE CD1 C Y N 485 PHE CD2 C Y N 486 PHE CE1 C Y N 487 PHE CE2 C Y N 488 PHE CZ C Y N 489 PHE OXT O N N 490 PHE H H N N 491 PHE H2 H N N 492 PHE HA H N N 493 PHE HB2 H N N 494 PHE HB3 H N N 495 PHE HD1 H N N 496 PHE HD2 H N N 497 PHE HE1 H N N 498 PHE HE2 H N N 499 PHE HZ H N N 500 PHE HXT H N N 501 PRO N N N N 502 PRO CA C N S 503 PRO C C N N 504 PRO O O N N 505 PRO CB C N N 506 PRO CG C N N 507 PRO CD C N N 508 PRO OXT O N N 509 PRO H H N N 510 PRO HA H N N 511 PRO HB2 H N N 512 PRO HB3 H N N 513 PRO HG2 H N N 514 PRO HG3 H N N 515 PRO HD2 H N N 516 PRO HD3 H N N 517 PRO HXT H N N 518 SER N N N N 519 SER CA C N S 520 SER C C N N 521 SER O O N N 522 SER CB C N N 523 SER OG O N N 524 SER OXT O N N 525 SER H H N N 526 SER H2 H N N 527 SER HA H N N 528 SER HB2 H N N 529 SER HB3 H N N 530 SER HG H N N 531 SER HXT H N N 532 THR N N N N 533 THR CA C N S 534 THR C C N N 535 THR O O N N 536 THR CB C N R 537 THR OG1 O N N 538 THR CG2 C N N 539 THR OXT O N N 540 THR H H N N 541 THR H2 H N N 542 THR HA H N N 543 THR HB H N N 544 THR HG1 H N N 545 THR HG21 H N N 546 THR HG22 H N N 547 THR HG23 H N N 548 THR HXT H N N 549 TRP N N N N 550 TRP CA C N S 551 TRP C C N N 552 TRP O O N N 553 TRP CB C N N 554 TRP CG C Y N 555 TRP CD1 C Y N 556 TRP CD2 C Y N 557 TRP NE1 N Y N 558 TRP CE2 C Y N 559 TRP CE3 C Y N 560 TRP CZ2 C Y N 561 TRP CZ3 C Y N 562 TRP CH2 C Y N 563 TRP OXT O N N 564 TRP H H N N 565 TRP H2 H N N 566 TRP HA H N N 567 TRP HB2 H N N 568 TRP HB3 H N N 569 TRP HD1 H N N 570 TRP HE1 H N N 571 TRP HE3 H N N 572 TRP HZ2 H N N 573 TRP HZ3 H N N 574 TRP HH2 H N N 575 TRP HXT H N N 576 TYR N N N N 577 TYR CA C N S 578 TYR C C N N 579 TYR O O N N 580 TYR CB C N N 581 TYR CG C Y N 582 TYR CD1 C Y N 583 TYR CD2 C Y N 584 TYR CE1 C Y N 585 TYR CE2 C Y N 586 TYR CZ C Y N 587 TYR OH O N N 588 TYR OXT O N N 589 TYR H H N N 590 TYR H2 H N N 591 TYR HA H N N 592 TYR HB2 H N N 593 TYR HB3 H N N 594 TYR HD1 H N N 595 TYR HD2 H N N 596 TYR HE1 H N N 597 TYR HE2 H N N 598 TYR HH H N N 599 TYR HXT H N N 600 VAL N N N N 601 VAL CA C N S 602 VAL C C N N 603 VAL O O N N 604 VAL CB C N N 605 VAL CG1 C N N 606 VAL CG2 C N N 607 VAL OXT O N N 608 VAL H H N N 609 VAL H2 H N N 610 VAL HA H N N 611 VAL HB H N N 612 VAL HG11 H N N 613 VAL HG12 H N N 614 VAL HG13 H N N 615 VAL HG21 H N N 616 VAL HG22 H N N 617 VAL HG23 H N N 618 VAL HXT H N N 619 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6CF C2 N1 sing N N 1 6CF "C1'" N1 sing N N 2 6CF N1 C6 sing N N 3 6CF "O5'" P1 sing N N 4 6CF C3A P1 sing N N 5 6CF P1 O2A doub N N 6 6CF P1 O1A sing N N 7 6CF O2 C2 doub N N 8 6CF C2 N3 sing N N 9 6CF O1B P2 doub N N 10 6CF P2 O2B sing N N 11 6CF P2 C3A sing N N 12 6CF P2 O3B sing N N 13 6CF N3 C4 doub N N 14 6CF O3B P3 sing N N 15 6CF P3 O3G doub N N 16 6CF P3 O1G sing N N 17 6CF P3 O2G sing N N 18 6CF C4 N4 sing N N 19 6CF C4 C5 sing N N 20 6CF N4 HN4 sing N N 21 6CF N4 HN4A sing N N 22 6CF C6 C5 doub N N 23 6CF C5 H5 sing N N 24 6CF C6 H6 sing N N 25 6CF "C2'" "C1'" sing N N 26 6CF "C1'" "O4'" sing N N 27 6CF "C1'" "H1'" sing N N 28 6CF F1A C3A sing N N 29 6CF O1A HO1A sing N N 30 6CF O1G HO1G sing N N 31 6CF "C2'" "C3'" sing N N 32 6CF "C2'" "H2'" sing N N 33 6CF "C2'" "H2'A" sing N N 34 6CF C3A F2A sing N N 35 6CF O2B HO2B sing N N 36 6CF O2G HO2G sing N N 37 6CF "O3'" "C3'" sing N N 38 6CF "C3'" "C4'" sing N N 39 6CF "C3'" "H3'" sing N N 40 6CF "O3'" "HO3'" sing N N 41 6CF "O4'" "C4'" sing N N 42 6CF "C4'" "C5'" sing N N 43 6CF "C4'" "H4'" sing N N 44 6CF "C5'" "O5'" sing N N 45 6CF "C5'" "H5'" sing N N 46 6CF "C5'" "H5'A" sing N N 47 8OG OP3 P sing N N 48 8OG OP3 HOP3 sing N N 49 8OG P OP1 doub N N 50 8OG P OP2 sing N N 51 8OG P "O5'" sing N N 52 8OG OP2 HOP2 sing N N 53 8OG "O5'" "C5'" sing N N 54 8OG "C5'" "C4'" sing N N 55 8OG "C5'" "H5'" sing N N 56 8OG "C5'" "H5''" sing N N 57 8OG "C4'" "O4'" sing N N 58 8OG "C4'" "C3'" sing N N 59 8OG "C4'" "H4'" sing N N 60 8OG "O4'" "C1'" sing N N 61 8OG "C3'" "O3'" sing N N 62 8OG "C3'" "C2'" sing N N 63 8OG "C3'" "H3'" sing N N 64 8OG "O3'" "HO3'" sing N N 65 8OG "C2'" "C1'" sing N N 66 8OG "C2'" "H2'" sing N N 67 8OG "C2'" "H2''" sing N N 68 8OG "C1'" N9 sing N N 69 8OG "C1'" "H1'" sing N N 70 8OG N9 C8 sing N N 71 8OG N9 C4 sing N N 72 8OG C8 N7 sing N N 73 8OG C8 O8 doub N N 74 8OG N7 C5 sing N N 75 8OG N7 H7 sing N N 76 8OG C5 C6 sing N N 77 8OG C5 C4 doub N N 78 8OG C6 O6 doub N N 79 8OG C6 N1 sing N N 80 8OG N1 C2 sing N N 81 8OG N1 H1 sing N N 82 8OG C2 N2 sing N N 83 8OG C2 N3 doub N N 84 8OG N2 H21 sing N N 85 8OG N2 H22 sing N N 86 8OG N3 C4 sing N N 87 ALA N CA sing N N 88 ALA N H sing N N 89 ALA N H2 sing N N 90 ALA CA C sing N N 91 ALA CA CB sing N N 92 ALA CA HA sing N N 93 ALA C O doub N N 94 ALA C OXT sing N N 95 ALA CB HB1 sing N N 96 ALA CB HB2 sing N N 97 ALA CB HB3 sing N N 98 ALA OXT HXT sing N N 99 ARG N CA sing N N 100 ARG N H sing N N 101 ARG N H2 sing N N 102 ARG CA C sing N N 103 ARG CA CB sing N N 104 ARG CA HA sing N N 105 ARG C O doub N N 106 ARG C OXT sing N N 107 ARG CB CG sing N N 108 ARG CB HB2 sing N N 109 ARG CB HB3 sing N N 110 ARG CG CD sing N N 111 ARG CG HG2 sing N N 112 ARG CG HG3 sing N N 113 ARG CD NE sing N N 114 ARG CD HD2 sing N N 115 ARG CD HD3 sing N N 116 ARG NE CZ sing N N 117 ARG NE HE sing N N 118 ARG CZ NH1 sing N N 119 ARG CZ NH2 doub N N 120 ARG NH1 HH11 sing N N 121 ARG NH1 HH12 sing N N 122 ARG NH2 HH21 sing N N 123 ARG NH2 HH22 sing N N 124 ARG OXT HXT sing N N 125 ASN N CA sing N N 126 ASN N H sing N N 127 ASN N H2 sing N N 128 ASN CA C sing N N 129 ASN CA CB sing N N 130 ASN CA HA sing N N 131 ASN C O doub N N 132 ASN C OXT sing N N 133 ASN CB CG sing N N 134 ASN CB HB2 sing N N 135 ASN CB HB3 sing N N 136 ASN CG OD1 doub N N 137 ASN CG ND2 sing N N 138 ASN ND2 HD21 sing N N 139 ASN ND2 HD22 sing N N 140 ASN OXT HXT sing N N 141 ASP N CA sing N N 142 ASP N H sing N N 143 ASP N H2 sing N N 144 ASP CA C sing N N 145 ASP CA CB sing N N 146 ASP CA HA sing N N 147 ASP C O doub N N 148 ASP C OXT sing N N 149 ASP CB CG sing N N 150 ASP CB HB2 sing N N 151 ASP CB HB3 sing N N 152 ASP CG OD1 doub N N 153 ASP CG OD2 sing N N 154 ASP OD2 HD2 sing N N 155 ASP OXT HXT sing N N 156 CYS N CA sing N N 157 CYS N H sing N N 158 CYS N H2 sing N N 159 CYS CA C sing N N 160 CYS CA CB sing N N 161 CYS CA HA sing N N 162 CYS C O doub N N 163 CYS C OXT sing N N 164 CYS CB SG sing N N 165 CYS CB HB2 sing N N 166 CYS CB HB3 sing N N 167 CYS SG HG sing N N 168 CYS OXT HXT sing N N 169 DA OP3 P sing N N 170 DA OP3 HOP3 sing N N 171 DA P OP1 doub N N 172 DA P OP2 sing N N 173 DA P "O5'" sing N N 174 DA OP2 HOP2 sing N N 175 DA "O5'" "C5'" sing N N 176 DA "C5'" "C4'" sing N N 177 DA "C5'" "H5'" sing N N 178 DA "C5'" "H5''" sing N N 179 DA "C4'" "O4'" sing N N 180 DA "C4'" "C3'" sing N N 181 DA "C4'" "H4'" sing N N 182 DA "O4'" "C1'" sing N N 183 DA "C3'" "O3'" sing N N 184 DA "C3'" "C2'" sing N N 185 DA "C3'" "H3'" sing N N 186 DA "O3'" "HO3'" sing N N 187 DA "C2'" "C1'" sing N N 188 DA "C2'" "H2'" sing N N 189 DA "C2'" "H2''" sing N N 190 DA "C1'" N9 sing N N 191 DA "C1'" "H1'" sing N N 192 DA N9 C8 sing Y N 193 DA N9 C4 sing Y N 194 DA C8 N7 doub Y N 195 DA C8 H8 sing N N 196 DA N7 C5 sing Y N 197 DA C5 C6 sing Y N 198 DA C5 C4 doub Y N 199 DA C6 N6 sing N N 200 DA C6 N1 doub Y N 201 DA N6 H61 sing N N 202 DA N6 H62 sing N N 203 DA N1 C2 sing Y N 204 DA C2 N3 doub Y N 205 DA C2 H2 sing N N 206 DA N3 C4 sing Y N 207 DC OP3 P sing N N 208 DC OP3 HOP3 sing N N 209 DC P OP1 doub N N 210 DC P OP2 sing N N 211 DC P "O5'" sing N N 212 DC OP2 HOP2 sing N N 213 DC "O5'" "C5'" sing N N 214 DC "C5'" "C4'" sing N N 215 DC "C5'" "H5'" sing N N 216 DC "C5'" "H5''" sing N N 217 DC "C4'" "O4'" sing N N 218 DC "C4'" "C3'" sing N N 219 DC "C4'" "H4'" sing N N 220 DC "O4'" "C1'" sing N N 221 DC "C3'" "O3'" sing N N 222 DC "C3'" "C2'" sing N N 223 DC "C3'" "H3'" sing N N 224 DC "O3'" "HO3'" sing N N 225 DC "C2'" "C1'" sing N N 226 DC "C2'" "H2'" sing N N 227 DC "C2'" "H2''" sing N N 228 DC "C1'" N1 sing N N 229 DC "C1'" "H1'" sing N N 230 DC N1 C2 sing N N 231 DC N1 C6 sing N N 232 DC C2 O2 doub N N 233 DC C2 N3 sing N N 234 DC N3 C4 doub N N 235 DC C4 N4 sing N N 236 DC C4 C5 sing N N 237 DC N4 H41 sing N N 238 DC N4 H42 sing N N 239 DC C5 C6 doub N N 240 DC C5 H5 sing N N 241 DC C6 H6 sing N N 242 DG OP3 P sing N N 243 DG OP3 HOP3 sing N N 244 DG P OP1 doub N N 245 DG P OP2 sing N N 246 DG P "O5'" sing N N 247 DG OP2 HOP2 sing N N 248 DG "O5'" "C5'" sing N N 249 DG "C5'" "C4'" sing N N 250 DG "C5'" "H5'" sing N N 251 DG "C5'" "H5''" sing N N 252 DG "C4'" "O4'" sing N N 253 DG "C4'" "C3'" sing N N 254 DG "C4'" "H4'" sing N N 255 DG "O4'" "C1'" sing N N 256 DG "C3'" "O3'" sing N N 257 DG "C3'" "C2'" sing N N 258 DG "C3'" "H3'" sing N N 259 DG "O3'" "HO3'" sing N N 260 DG "C2'" "C1'" sing N N 261 DG "C2'" "H2'" sing N N 262 DG "C2'" "H2''" sing N N 263 DG "C1'" N9 sing N N 264 DG "C1'" "H1'" sing N N 265 DG N9 C8 sing Y N 266 DG N9 C4 sing Y N 267 DG C8 N7 doub Y N 268 DG C8 H8 sing N N 269 DG N7 C5 sing Y N 270 DG C5 C6 sing N N 271 DG C5 C4 doub Y N 272 DG C6 O6 doub N N 273 DG C6 N1 sing N N 274 DG N1 C2 sing N N 275 DG N1 H1 sing N N 276 DG C2 N2 sing N N 277 DG C2 N3 doub N N 278 DG N2 H21 sing N N 279 DG N2 H22 sing N N 280 DG N3 C4 sing N N 281 DT OP3 P sing N N 282 DT OP3 HOP3 sing N N 283 DT P OP1 doub N N 284 DT P OP2 sing N N 285 DT P "O5'" sing N N 286 DT OP2 HOP2 sing N N 287 DT "O5'" "C5'" sing N N 288 DT "C5'" "C4'" sing N N 289 DT "C5'" "H5'" sing N N 290 DT "C5'" "H5''" sing N N 291 DT "C4'" "O4'" sing N N 292 DT "C4'" "C3'" sing N N 293 DT "C4'" "H4'" sing N N 294 DT "O4'" "C1'" sing N N 295 DT "C3'" "O3'" sing N N 296 DT "C3'" "C2'" sing N N 297 DT "C3'" "H3'" sing N N 298 DT "O3'" "HO3'" sing N N 299 DT "C2'" "C1'" sing N N 300 DT "C2'" "H2'" sing N N 301 DT "C2'" "H2''" sing N N 302 DT "C1'" N1 sing N N 303 DT "C1'" "H1'" sing N N 304 DT N1 C2 sing N N 305 DT N1 C6 sing N N 306 DT C2 O2 doub N N 307 DT C2 N3 sing N N 308 DT N3 C4 sing N N 309 DT N3 H3 sing N N 310 DT C4 O4 doub N N 311 DT C4 C5 sing N N 312 DT C5 C7 sing N N 313 DT C5 C6 doub N N 314 DT C7 H71 sing N N 315 DT C7 H72 sing N N 316 DT C7 H73 sing N N 317 DT C6 H6 sing N N 318 GLN N CA sing N N 319 GLN N H sing N N 320 GLN N H2 sing N N 321 GLN CA C sing N N 322 GLN CA CB sing N N 323 GLN CA HA sing N N 324 GLN C O doub N N 325 GLN C OXT sing N N 326 GLN CB CG sing N N 327 GLN CB HB2 sing N N 328 GLN CB HB3 sing N N 329 GLN CG CD sing N N 330 GLN CG HG2 sing N N 331 GLN CG HG3 sing N N 332 GLN CD OE1 doub N N 333 GLN CD NE2 sing N N 334 GLN NE2 HE21 sing N N 335 GLN NE2 HE22 sing N N 336 GLN OXT HXT sing N N 337 GLU N CA sing N N 338 GLU N H sing N N 339 GLU N H2 sing N N 340 GLU CA C sing N N 341 GLU CA CB sing N N 342 GLU CA HA sing N N 343 GLU C O doub N N 344 GLU C OXT sing N N 345 GLU CB CG sing N N 346 GLU CB HB2 sing N N 347 GLU CB HB3 sing N N 348 GLU CG CD sing N N 349 GLU CG HG2 sing N N 350 GLU CG HG3 sing N N 351 GLU CD OE1 doub N N 352 GLU CD OE2 sing N N 353 GLU OE2 HE2 sing N N 354 GLU OXT HXT sing N N 355 GLY N CA sing N N 356 GLY N H sing N N 357 GLY N H2 sing N N 358 GLY CA C sing N N 359 GLY CA HA2 sing N N 360 GLY CA HA3 sing N N 361 GLY C O doub N N 362 GLY C OXT sing N N 363 GLY OXT HXT sing N N 364 HIS N CA sing N N 365 HIS N H sing N N 366 HIS N H2 sing N N 367 HIS CA C sing N N 368 HIS CA CB sing N N 369 HIS CA HA sing N N 370 HIS C O doub N N 371 HIS C OXT sing N N 372 HIS CB CG sing N N 373 HIS CB HB2 sing N N 374 HIS CB HB3 sing N N 375 HIS CG ND1 sing Y N 376 HIS CG CD2 doub Y N 377 HIS ND1 CE1 doub Y N 378 HIS ND1 HD1 sing N N 379 HIS CD2 NE2 sing Y N 380 HIS CD2 HD2 sing N N 381 HIS CE1 NE2 sing Y N 382 HIS CE1 HE1 sing N N 383 HIS NE2 HE2 sing N N 384 HIS OXT HXT sing N N 385 HOH O H1 sing N N 386 HOH O H2 sing N N 387 ILE N CA sing N N 388 ILE N H sing N N 389 ILE N H2 sing N N 390 ILE CA C sing N N 391 ILE CA CB sing N N 392 ILE CA HA sing N N 393 ILE C O doub N N 394 ILE C OXT sing N N 395 ILE CB CG1 sing N N 396 ILE CB CG2 sing N N 397 ILE CB HB sing N N 398 ILE CG1 CD1 sing N N 399 ILE CG1 HG12 sing N N 400 ILE CG1 HG13 sing N N 401 ILE CG2 HG21 sing N N 402 ILE CG2 HG22 sing N N 403 ILE CG2 HG23 sing N N 404 ILE CD1 HD11 sing N N 405 ILE CD1 HD12 sing N N 406 ILE CD1 HD13 sing N N 407 ILE OXT HXT sing N N 408 LEU N CA sing N N 409 LEU N H sing N N 410 LEU N H2 sing N N 411 LEU CA C sing N N 412 LEU CA CB sing N N 413 LEU CA HA sing N N 414 LEU C O doub N N 415 LEU C OXT sing N N 416 LEU CB CG sing N N 417 LEU CB HB2 sing N N 418 LEU CB HB3 sing N N 419 LEU CG CD1 sing N N 420 LEU CG CD2 sing N N 421 LEU CG HG sing N N 422 LEU CD1 HD11 sing N N 423 LEU CD1 HD12 sing N N 424 LEU CD1 HD13 sing N N 425 LEU CD2 HD21 sing N N 426 LEU CD2 HD22 sing N N 427 LEU CD2 HD23 sing N N 428 LEU OXT HXT sing N N 429 LYS N CA sing N N 430 LYS N H sing N N 431 LYS N H2 sing N N 432 LYS CA C sing N N 433 LYS CA CB sing N N 434 LYS CA HA sing N N 435 LYS C O doub N N 436 LYS C OXT sing N N 437 LYS CB CG sing N N 438 LYS CB HB2 sing N N 439 LYS CB HB3 sing N N 440 LYS CG CD sing N N 441 LYS CG HG2 sing N N 442 LYS CG HG3 sing N N 443 LYS CD CE sing N N 444 LYS CD HD2 sing N N 445 LYS CD HD3 sing N N 446 LYS CE NZ sing N N 447 LYS CE HE2 sing N N 448 LYS CE HE3 sing N N 449 LYS NZ HZ1 sing N N 450 LYS NZ HZ2 sing N N 451 LYS NZ HZ3 sing N N 452 LYS OXT HXT sing N N 453 MET N CA sing N N 454 MET N H sing N N 455 MET N H2 sing N N 456 MET CA C sing N N 457 MET CA CB sing N N 458 MET CA HA sing N N 459 MET C O doub N N 460 MET C OXT sing N N 461 MET CB CG sing N N 462 MET CB HB2 sing N N 463 MET CB HB3 sing N N 464 MET CG SD sing N N 465 MET CG HG2 sing N N 466 MET CG HG3 sing N N 467 MET SD CE sing N N 468 MET CE HE1 sing N N 469 MET CE HE2 sing N N 470 MET CE HE3 sing N N 471 MET OXT HXT sing N N 472 PHE N CA sing N N 473 PHE N H sing N N 474 PHE N H2 sing N N 475 PHE CA C sing N N 476 PHE CA CB sing N N 477 PHE CA HA sing N N 478 PHE C O doub N N 479 PHE C OXT sing N N 480 PHE CB CG sing N N 481 PHE CB HB2 sing N N 482 PHE CB HB3 sing N N 483 PHE CG CD1 doub Y N 484 PHE CG CD2 sing Y N 485 PHE CD1 CE1 sing Y N 486 PHE CD1 HD1 sing N N 487 PHE CD2 CE2 doub Y N 488 PHE CD2 HD2 sing N N 489 PHE CE1 CZ doub Y N 490 PHE CE1 HE1 sing N N 491 PHE CE2 CZ sing Y N 492 PHE CE2 HE2 sing N N 493 PHE CZ HZ sing N N 494 PHE OXT HXT sing N N 495 PRO N CA sing N N 496 PRO N CD sing N N 497 PRO N H sing N N 498 PRO CA C sing N N 499 PRO CA CB sing N N 500 PRO CA HA sing N N 501 PRO C O doub N N 502 PRO C OXT sing N N 503 PRO CB CG sing N N 504 PRO CB HB2 sing N N 505 PRO CB HB3 sing N N 506 PRO CG CD sing N N 507 PRO CG HG2 sing N N 508 PRO CG HG3 sing N N 509 PRO CD HD2 sing N N 510 PRO CD HD3 sing N N 511 PRO OXT HXT sing N N 512 SER N CA sing N N 513 SER N H sing N N 514 SER N H2 sing N N 515 SER CA C sing N N 516 SER CA CB sing N N 517 SER CA HA sing N N 518 SER C O doub N N 519 SER C OXT sing N N 520 SER CB OG sing N N 521 SER CB HB2 sing N N 522 SER CB HB3 sing N N 523 SER OG HG sing N N 524 SER OXT HXT sing N N 525 THR N CA sing N N 526 THR N H sing N N 527 THR N H2 sing N N 528 THR CA C sing N N 529 THR CA CB sing N N 530 THR CA HA sing N N 531 THR C O doub N N 532 THR C OXT sing N N 533 THR CB OG1 sing N N 534 THR CB CG2 sing N N 535 THR CB HB sing N N 536 THR OG1 HG1 sing N N 537 THR CG2 HG21 sing N N 538 THR CG2 HG22 sing N N 539 THR CG2 HG23 sing N N 540 THR OXT HXT sing N N 541 TRP N CA sing N N 542 TRP N H sing N N 543 TRP N H2 sing N N 544 TRP CA C sing N N 545 TRP CA CB sing N N 546 TRP CA HA sing N N 547 TRP C O doub N N 548 TRP C OXT sing N N 549 TRP CB CG sing N N 550 TRP CB HB2 sing N N 551 TRP CB HB3 sing N N 552 TRP CG CD1 doub Y N 553 TRP CG CD2 sing Y N 554 TRP CD1 NE1 sing Y N 555 TRP CD1 HD1 sing N N 556 TRP CD2 CE2 doub Y N 557 TRP CD2 CE3 sing Y N 558 TRP NE1 CE2 sing Y N 559 TRP NE1 HE1 sing N N 560 TRP CE2 CZ2 sing Y N 561 TRP CE3 CZ3 doub Y N 562 TRP CE3 HE3 sing N N 563 TRP CZ2 CH2 doub Y N 564 TRP CZ2 HZ2 sing N N 565 TRP CZ3 CH2 sing Y N 566 TRP CZ3 HZ3 sing N N 567 TRP CH2 HH2 sing N N 568 TRP OXT HXT sing N N 569 TYR N CA sing N N 570 TYR N H sing N N 571 TYR N H2 sing N N 572 TYR CA C sing N N 573 TYR CA CB sing N N 574 TYR CA HA sing N N 575 TYR C O doub N N 576 TYR C OXT sing N N 577 TYR CB CG sing N N 578 TYR CB HB2 sing N N 579 TYR CB HB3 sing N N 580 TYR CG CD1 doub Y N 581 TYR CG CD2 sing Y N 582 TYR CD1 CE1 sing Y N 583 TYR CD1 HD1 sing N N 584 TYR CD2 CE2 doub Y N 585 TYR CD2 HD2 sing N N 586 TYR CE1 CZ doub Y N 587 TYR CE1 HE1 sing N N 588 TYR CE2 CZ sing Y N 589 TYR CE2 HE2 sing N N 590 TYR CZ OH sing N N 591 TYR OH HH sing N N 592 TYR OXT HXT sing N N 593 VAL N CA sing N N 594 VAL N H sing N N 595 VAL N H2 sing N N 596 VAL CA C sing N N 597 VAL CA CB sing N N 598 VAL CA HA sing N N 599 VAL C O doub N N 600 VAL C OXT sing N N 601 VAL CB CG1 sing N N 602 VAL CB CG2 sing N N 603 VAL CB HB sing N N 604 VAL CG1 HG11 sing N N 605 VAL CG1 HG12 sing N N 606 VAL CG1 HG13 sing N N 607 VAL CG2 HG21 sing N N 608 VAL CG2 HG22 sing N N 609 VAL CG2 HG23 sing N N 610 VAL OXT HXT sing N N 611 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4GXJ 'double helix' 4GXJ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 D DC 5 1_555 -0.344 -0.210 -0.477 -12.212 -3.762 0.780 1 D_DG1:DC5_T D 1 ? T 5 ? 19 1 1 B DT 2 1_555 D DA 4 1_555 -0.518 -0.185 -0.022 -7.426 -13.881 -6.976 2 D_DT2:DA4_T D 2 ? T 4 ? 20 1 1 B DC 3 1_555 D DG 3 1_555 0.097 -0.362 -0.271 3.822 -6.446 -3.268 3 D_DC3:DG3_T D 3 ? T 3 ? 19 1 1 B DG 4 1_555 D DC 2 1_555 -0.210 -0.277 0.589 9.884 -11.620 -6.833 4 D_DG4:DC2_T D 4 ? T 2 ? 19 1 1 B DG 5 1_555 D DC 1 1_555 -0.381 -0.147 0.198 9.056 -17.602 1.503 5 D_DG5:DC1_T D 5 ? T 1 ? 19 1 1 C DG 1 1_555 D DC 16 1_555 -0.500 -0.078 0.020 -7.123 -7.595 4.383 6 P_DG1:DC16_T P 1 ? T 16 ? 19 1 1 C DC 2 1_555 D DG 15 1_555 0.411 -0.250 0.512 -5.610 -2.369 -3.300 7 P_DC2:DG15_T P 2 ? T 15 ? 19 1 1 C DT 3 1_555 D DA 14 1_555 -0.024 -0.080 0.595 0.481 -12.684 9.085 8 P_DT3:DA14_T P 3 ? T 14 ? 20 1 1 C DG 4 1_555 D DC 13 1_555 0.029 -0.191 -0.262 -6.625 -13.345 -0.315 9 P_DG4:DC13_T P 4 ? T 13 ? 19 1 1 C DA 5 1_555 D DT 12 1_555 -0.358 -0.274 -0.485 1.469 4.631 -2.149 10 P_DA5:DT12_T P 5 ? T 12 ? 20 1 1 C DT 6 1_555 D DA 11 1_555 -0.233 -0.098 -0.085 0.535 -6.146 -0.725 11 P_DT6:DA11_T P 6 ? T 11 ? 20 1 1 C DG 7 1_555 D DC 10 1_555 0.317 -0.049 0.144 -4.024 -7.140 1.274 12 P_DG7:DC10_T P 7 ? T 10 ? 19 1 1 C DC 8 1_555 D DG 9 1_555 0.134 -0.218 -0.573 3.978 -5.035 -0.773 13 P_DC8:DG9_T P 8 ? T 9 ? 19 1 1 C DG 9 1_555 D DC 8 1_555 -0.225 0.043 0.494 18.601 -0.874 4.891 14 P_DG9:DC8_T P 9 ? T 8 ? 19 1 1 C DA 10 1_555 D DT 7 1_555 0.423 0.549 0.231 2.235 -6.152 15.405 15 P_DA10:DT7_T P 10 ? T 7 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 D DC 5 1_555 B DT 2 1_555 D DA 4 1_555 -0.821 -0.238 3.166 -4.271 0.042 30.797 -0.453 0.725 3.247 0.079 7.995 31.085 1 DD_DG1DT2:DA4DC5_TT D 1 ? T 5 ? D 2 ? T 4 ? 1 B DT 2 1_555 D DA 4 1_555 B DC 3 1_555 D DG 3 1_555 1.053 1.384 2.973 5.668 -0.021 43.894 1.840 -0.908 3.078 -0.028 -7.545 44.241 2 DD_DT2DC3:DG3DA4_TT D 2 ? T 4 ? D 3 ? T 3 ? 1 B DC 3 1_555 D DG 3 1_555 B DG 4 1_555 D DC 2 1_555 -0.593 1.468 3.313 -7.278 2.856 34.113 1.991 -0.167 3.470 4.791 12.209 34.972 3 DD_DC3DG4:DC2DG3_TT D 3 ? T 3 ? D 4 ? T 2 ? 1 B DG 4 1_555 D DC 2 1_555 B DG 5 1_555 D DC 1 1_555 0.536 0.210 3.474 0.003 6.027 37.345 -0.503 -0.827 3.465 9.338 -0.004 37.811 4 DD_DG4DG5:DC1DC2_TT D 4 ? T 2 ? D 5 ? T 1 ? 1 C DG 1 1_555 D DC 16 1_555 C DC 2 1_555 D DG 15 1_555 -1.166 -0.454 3.397 -4.538 -1.912 35.983 -0.444 1.196 3.531 -3.077 7.303 36.307 5 PP_DG1DC2:DG15DC16_TT P 1 ? T 16 ? P 2 ? T 15 ? 1 C DC 2 1_555 D DG 15 1_555 C DT 3 1_555 D DA 14 1_555 0.205 -0.143 3.157 3.123 8.602 25.455 -2.413 0.326 2.956 18.766 -6.813 27.024 6 PP_DC2DT3:DA14DG15_TT P 2 ? T 15 ? P 3 ? T 14 ? 1 C DT 3 1_555 D DA 14 1_555 C DG 4 1_555 D DC 13 1_555 -0.214 2.417 3.515 5.732 -6.448 49.358 3.335 0.678 3.155 -7.654 -6.803 50.060 7 PP_DT3DG4:DC13DA14_TT P 3 ? T 14 ? P 4 ? T 13 ? 1 C DG 4 1_555 D DC 13 1_555 C DA 5 1_555 D DT 12 1_555 -0.491 0.678 2.922 -6.742 14.561 32.030 -0.908 -0.132 2.987 24.558 11.370 35.730 8 PP_DG4DA5:DT12DC13_TT P 4 ? T 13 ? P 5 ? T 12 ? 1 C DA 5 1_555 D DT 12 1_555 C DT 6 1_555 D DA 11 1_555 0.152 -0.184 3.531 -2.311 -13.834 35.342 1.649 -0.556 3.354 -21.759 3.635 37.941 9 PP_DA5DT6:DA11DT12_TT P 5 ? T 12 ? P 6 ? T 11 ? 1 C DT 6 1_555 D DA 11 1_555 C DG 7 1_555 D DC 10 1_555 0.824 -0.372 3.395 2.296 2.117 37.124 -0.875 -0.972 3.412 3.318 -3.598 37.250 10 PP_DT6DG7:DC10DA11_TT P 6 ? T 11 ? P 7 ? T 10 ? 1 C DG 7 1_555 D DC 10 1_555 C DC 8 1_555 D DG 9 1_555 0.371 -0.343 3.034 8.556 7.914 29.170 -2.024 0.814 2.840 14.982 -16.197 31.366 11 PP_DG7DC8:DG9DC10_TT P 7 ? T 10 ? P 8 ? T 9 ? 1 C DC 8 1_555 D DG 9 1_555 C DG 9 1_555 D DC 8 1_555 1.255 -0.702 3.153 -10.354 11.443 32.597 -2.567 -3.326 2.297 19.109 17.291 35.975 12 PP_DC8DG9:DC8DG9_TT P 8 ? T 9 ? P 9 ? T 8 ? 1 C DG 9 1_555 D DC 8 1_555 C DA 10 1_555 D DT 7 1_555 -0.284 -0.202 4.169 4.004 -10.232 39.152 1.167 0.980 4.048 -14.915 -5.837 40.606 13 PP_DG9DA10:DT7DC8_TT P 9 ? T 8 ? P 10 ? T 7 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 "2'-deoxy-5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]cytidine" 6CF 6 'MANGANESE (II) ION' MN 7 'SODIUM ION' NA 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2FMS _pdbx_initial_refinement_model.details 2FMS.PDB #