data_4H08 # _entry.id 4H08 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4H08 pdb_00004h08 10.2210/pdb4h08/pdb RCSB RCSB074854 ? ? WWPDB D_1000074854 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-417742 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4H08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-09-07 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a putative hydrolase (BT3161) from Bacteroides thetaiotaomicron VPI-5482 at 1.80 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4H08 _cell.length_a 77.890 _cell.length_b 77.890 _cell.length_c 64.094 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4H08 _symmetry.Int_Tables_number 152 _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative hydrolase' 22576.684 1 ? ? 'UNP residues 25-223' ? 2 non-polymer syn 'UNKNOWN LIGAND' ? 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 non-polymer syn 'ISOPROPYL ALCOHOL' 60.095 1 ? ? ? ? 5 water nat water 18.015 319 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GREYIEWSDIWIPGANKTDLPHVLLIGNSITRGYYGKVEAALKEKAYVGRLSNSKSVGDPALIEELAVVLKNTKFDVIHF NNGLHGFDYTEEEYDKSFPKLIKIIRKYAPKAKLIWANTTPVRTGEG(MSE)KEFAPITERLNVRNQIALKHINRASIEV NDLWKVVIDHPEYYAGGDGTHPIDAGYSALANQVIKVIKNVLVH ; _entity_poly.pdbx_seq_one_letter_code_can ;GREYIEWSDIWIPGANKTDLPHVLLIGNSITRGYYGKVEAALKEKAYVGRLSNSKSVGDPALIEELAVVLKNTKFDVIHF NNGLHGFDYTEEEYDKSFPKLIKIIRKYAPKAKLIWANTTPVRTGEGMKEFAPITERLNVRNQIALKHINRASIEVNDLW KVVIDHPEYYAGGDGTHPIDAGYSALANQVIKVIKNVLVH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-417742 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ARG n 1 3 GLU n 1 4 TYR n 1 5 ILE n 1 6 GLU n 1 7 TRP n 1 8 SER n 1 9 ASP n 1 10 ILE n 1 11 TRP n 1 12 ILE n 1 13 PRO n 1 14 GLY n 1 15 ALA n 1 16 ASN n 1 17 LYS n 1 18 THR n 1 19 ASP n 1 20 LEU n 1 21 PRO n 1 22 HIS n 1 23 VAL n 1 24 LEU n 1 25 LEU n 1 26 ILE n 1 27 GLY n 1 28 ASN n 1 29 SER n 1 30 ILE n 1 31 THR n 1 32 ARG n 1 33 GLY n 1 34 TYR n 1 35 TYR n 1 36 GLY n 1 37 LYS n 1 38 VAL n 1 39 GLU n 1 40 ALA n 1 41 ALA n 1 42 LEU n 1 43 LYS n 1 44 GLU n 1 45 LYS n 1 46 ALA n 1 47 TYR n 1 48 VAL n 1 49 GLY n 1 50 ARG n 1 51 LEU n 1 52 SER n 1 53 ASN n 1 54 SER n 1 55 LYS n 1 56 SER n 1 57 VAL n 1 58 GLY n 1 59 ASP n 1 60 PRO n 1 61 ALA n 1 62 LEU n 1 63 ILE n 1 64 GLU n 1 65 GLU n 1 66 LEU n 1 67 ALA n 1 68 VAL n 1 69 VAL n 1 70 LEU n 1 71 LYS n 1 72 ASN n 1 73 THR n 1 74 LYS n 1 75 PHE n 1 76 ASP n 1 77 VAL n 1 78 ILE n 1 79 HIS n 1 80 PHE n 1 81 ASN n 1 82 ASN n 1 83 GLY n 1 84 LEU n 1 85 HIS n 1 86 GLY n 1 87 PHE n 1 88 ASP n 1 89 TYR n 1 90 THR n 1 91 GLU n 1 92 GLU n 1 93 GLU n 1 94 TYR n 1 95 ASP n 1 96 LYS n 1 97 SER n 1 98 PHE n 1 99 PRO n 1 100 LYS n 1 101 LEU n 1 102 ILE n 1 103 LYS n 1 104 ILE n 1 105 ILE n 1 106 ARG n 1 107 LYS n 1 108 TYR n 1 109 ALA n 1 110 PRO n 1 111 LYS n 1 112 ALA n 1 113 LYS n 1 114 LEU n 1 115 ILE n 1 116 TRP n 1 117 ALA n 1 118 ASN n 1 119 THR n 1 120 THR n 1 121 PRO n 1 122 VAL n 1 123 ARG n 1 124 THR n 1 125 GLY n 1 126 GLU n 1 127 GLY n 1 128 MSE n 1 129 LYS n 1 130 GLU n 1 131 PHE n 1 132 ALA n 1 133 PRO n 1 134 ILE n 1 135 THR n 1 136 GLU n 1 137 ARG n 1 138 LEU n 1 139 ASN n 1 140 VAL n 1 141 ARG n 1 142 ASN n 1 143 GLN n 1 144 ILE n 1 145 ALA n 1 146 LEU n 1 147 LYS n 1 148 HIS n 1 149 ILE n 1 150 ASN n 1 151 ARG n 1 152 ALA n 1 153 SER n 1 154 ILE n 1 155 GLU n 1 156 VAL n 1 157 ASN n 1 158 ASP n 1 159 LEU n 1 160 TRP n 1 161 LYS n 1 162 VAL n 1 163 VAL n 1 164 ILE n 1 165 ASP n 1 166 HIS n 1 167 PRO n 1 168 GLU n 1 169 TYR n 1 170 TYR n 1 171 ALA n 1 172 GLY n 1 173 GLY n 1 174 ASP n 1 175 GLY n 1 176 THR n 1 177 HIS n 1 178 PRO n 1 179 ILE n 1 180 ASP n 1 181 ALA n 1 182 GLY n 1 183 TYR n 1 184 SER n 1 185 ALA n 1 186 LEU n 1 187 ALA n 1 188 ASN n 1 189 GLN n 1 190 VAL n 1 191 ILE n 1 192 LYS n 1 193 VAL n 1 194 ILE n 1 195 LYS n 1 196 ASN n 1 197 VAL n 1 198 LEU n 1 199 VAL n 1 200 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BT_3161 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides thetaiotaomicron' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 226186 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8A2Z4_BACTN _struct_ref.pdbx_db_accession Q8A2Z4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;REYIEWSDIWIPGANKTDLPHVLLIGNSITRGYYGKVEAALKEKAYVGRLSNSKSVGDPALIEELAVVLKNTKFDVIHFN NGLHGFDYTEEEYDKSFPKLIKIIRKYAPKAKLIWANTTPVRTGEGMKEFAPITERLNVRNQIALKHINRASIEVNDLWK VVIDHPEYYAGGDGTHPIDAGYSALANQVIKVIKNVLVH ; _struct_ref.pdbx_align_begin 25 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4H08 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 200 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8A2Z4 _struct_ref_seq.db_align_beg 25 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 223 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 25 _struct_ref_seq.pdbx_auth_seq_align_end 223 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4H08 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q8A2Z4 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IPA non-polymer . 'ISOPROPYL ALCOHOL' 2-PROPANOL 'C3 H8 O' 60.095 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNL non-polymer . 'UNKNOWN LIGAND' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4H08 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.52 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details ;5.00% Glycerol, 19.00% iso-Propanol, 19.00% PEG-4000, 0.1M Citrate pH 5.6, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.pdbx_collection_date 2012-02-09 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97975 1.0 2 0.91162 1.0 3 0.97916 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.97975,0.91162,0.97916 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 4H08 _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 29.847 _reflns.number_obs 21120 _reflns.pdbx_Rmerge_I_obs 0.104 _reflns.pdbx_netI_over_sigmaI 9.980 _reflns.percent_possible_obs 99.400 _reflns.B_iso_Wilson_estimate 17.128 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.800 1.860 11522 ? 3686 0.578 2.0 ? ? ? ? ? 97.600 1 1 1.860 1.940 15462 ? 4353 0.472 2.9 ? ? ? ? ? 99.600 2 1 1.940 2.030 13987 ? 3988 0.341 3.8 ? ? ? ? ? 99.600 3 1 2.030 2.130 12430 ? 3765 0.243 5.1 ? ? ? ? ? 99.300 4 1 2.130 2.270 15246 ? 4234 0.193 6.6 ? ? ? ? ? 99.700 5 1 2.270 2.440 13644 ? 3896 0.163 7.7 ? ? ? ? ? 99.600 6 1 2.440 2.690 13906 ? 4089 0.125 9.4 ? ? ? ? ? 99.500 7 1 2.690 3.070 14161 ? 3947 0.085 13.2 ? ? ? ? ? 99.800 8 1 3.070 3.870 14244 ? 4055 0.049 21.1 ? ? ? ? ? 99.500 9 1 3.870 ? 14291 ? 4046 0.039 27.6 ? ? ? ? ? 99.500 10 1 # _refine.entry_id 4H08 _refine.ls_d_res_high 1.8000 _refine.ls_d_res_low 29.847 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.6300 _refine.ls_number_reflns_obs 21100 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. GLYCEROL (GOL) AND 2-PROPANOL (IPA) FROM THE CRYSTALLIZATION CONDITION ARE MODELED. 6. AN UNKNOWN LIGAND (UNL) HAS BEEN MODELED IN THE PUTATIVE OXYANION HOLE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1496 _refine.ls_R_factor_R_work 0.1474 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1901 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1086 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 17.6735 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.3000 _refine.aniso_B[2][2] 0.3000 _refine.aniso_B[3][3] -0.4500 _refine.aniso_B[1][2] 0.1500 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9640 _refine.correlation_coeff_Fo_to_Fc_free 0.9460 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.1090 _refine.pdbx_overall_ESU_R_Free 0.1090 _refine.overall_SU_ML 0.0660 _refine.overall_SU_B 3.8710 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 56.310 _refine.B_iso_min 4.910 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1594 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 319 _refine_hist.number_atoms_total 1926 _refine_hist.d_res_high 1.8000 _refine_hist.d_res_low 29.847 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1677 0.013 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1149 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2277 1.315 1.960 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2816 0.910 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 209 5.795 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 73 33.197 24.247 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 294 10.956 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 8 18.907 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 250 0.090 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1848 0.006 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 328 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1015 1.424 3.000 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 412 0.420 3.000 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1649 2.307 5.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 662 3.859 8.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 625 5.668 11.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.8010 _refine_ls_shell.d_res_low 1.8470 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.5700 _refine_ls_shell.number_reflns_R_work 1447 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2450 _refine_ls_shell.R_factor_R_free 0.2700 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 66 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1513 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4H08 _struct.title 'Crystal structure of a putative hydrolase (BT3161) from Bacteroides thetaiotaomicron VPI-5482 at 1.80 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.text ;GDSL-like Lipase/Acylhydrolase family protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 4H08 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 28 ? LEU A 42 ? ASN A 51 LEU A 65 1 ? 15 HELX_P HELX_P2 2 ASP A 59 ? THR A 73 ? ASP A 82 THR A 96 1 ? 15 HELX_P HELX_P3 3 THR A 90 ? ALA A 109 ? THR A 113 ALA A 132 1 ? 20 HELX_P HELX_P4 4 GLY A 125 ? LYS A 129 ? GLY A 148 LYS A 152 5 ? 5 HELX_P HELX_P5 5 PRO A 133 ? ALA A 152 ? PRO A 156 ALA A 175 1 ? 20 HELX_P HELX_P6 6 ASP A 158 ? ILE A 164 ? ASP A 181 ILE A 187 1 ? 7 HELX_P HELX_P7 7 HIS A 166 ? TYR A 170 ? HIS A 189 TYR A 193 5 ? 5 HELX_P HELX_P8 8 ILE A 179 ? LEU A 198 ? ILE A 202 LEU A 221 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 127 C ? ? ? 1_555 A MSE 128 N ? ? A GLY 150 A MSE 151 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale2 covale both ? A MSE 128 C ? ? ? 1_555 A LYS 129 N A ? A MSE 151 A LYS 152 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A MSE 128 C ? ? ? 1_555 A LYS 129 N B ? A MSE 151 A LYS 152 1_555 ? ? ? ? ? ? ? 1.326 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 8 ? TRP A 11 ? SER A 31 TRP A 34 A 2 TYR A 47 ? ASN A 53 ? TYR A 70 ASN A 76 A 3 HIS A 22 ? GLY A 27 ? HIS A 45 GLY A 50 A 4 VAL A 77 ? PHE A 80 ? VAL A 100 PHE A 103 A 5 LYS A 113 ? ALA A 117 ? LYS A 136 ALA A 140 A 6 GLU A 155 ? ASN A 157 ? GLU A 178 ASN A 180 B 1 ARG A 123 ? THR A 124 ? ARG A 146 THR A 147 B 2 GLU A 130 ? PHE A 131 ? GLU A 153 PHE A 154 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 9 ? N ASP A 32 O SER A 52 ? O SER A 75 A 2 3 O TYR A 47 ? O TYR A 70 N VAL A 23 ? N VAL A 46 A 3 4 N ILE A 26 ? N ILE A 49 O HIS A 79 ? O HIS A 102 A 4 5 N PHE A 80 ? N PHE A 103 O ALA A 117 ? O ALA A 140 A 5 6 N TRP A 116 ? N TRP A 139 O ASN A 157 ? O ASN A 180 B 1 2 N THR A 124 ? N THR A 147 O GLU A 130 ? O GLU A 153 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 302 ? 9 'BINDING SITE FOR RESIDUE GOL A 302' AC2 Software A IPA 303 ? 5 'BINDING SITE FOR RESIDUE IPA A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 ASN A 139 ? ASN A 162 . ? 1_555 ? 2 AC1 9 ASN A 142 ? ASN A 165 . ? 1_555 ? 3 AC1 9 GLN A 143 ? GLN A 166 . ? 1_555 ? 4 AC1 9 ASP A 158 ? ASP A 181 . ? 1_555 ? 5 AC1 9 TRP A 160 ? TRP A 183 . ? 1_555 ? 6 AC1 9 HOH E . ? HOH A 418 . ? 1_555 ? 7 AC1 9 HOH E . ? HOH A 425 . ? 1_555 ? 8 AC1 9 HOH E . ? HOH A 538 . ? 1_555 ? 9 AC1 9 HOH E . ? HOH A 625 . ? 1_555 ? 10 AC2 5 THR A 135 ? THR A 158 . ? 4_555 ? 11 AC2 5 GLU A 136 ? GLU A 159 . ? 4_555 ? 12 AC2 5 TRP A 160 ? TRP A 183 . ? 1_555 ? 13 AC2 5 HOH E . ? HOH A 623 . ? 1_555 ? 14 AC2 5 HOH E . ? HOH A 630 . ? 4_555 ? # _atom_sites.entry_id 4H08 _atom_sites.fract_transf_matrix[1][1] 0.012839 _atom_sites.fract_transf_matrix[1][2] 0.007412 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014825 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015602 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 ARG 2 25 25 ARG ARG A . n A 1 3 GLU 3 26 26 GLU GLU A . n A 1 4 TYR 4 27 27 TYR TYR A . n A 1 5 ILE 5 28 28 ILE ILE A . n A 1 6 GLU 6 29 29 GLU GLU A . n A 1 7 TRP 7 30 30 TRP TRP A . n A 1 8 SER 8 31 31 SER SER A . n A 1 9 ASP 9 32 32 ASP ASP A . n A 1 10 ILE 10 33 33 ILE ILE A . n A 1 11 TRP 11 34 34 TRP TRP A . n A 1 12 ILE 12 35 35 ILE ILE A . n A 1 13 PRO 13 36 36 PRO PRO A . n A 1 14 GLY 14 37 37 GLY GLY A . n A 1 15 ALA 15 38 38 ALA ALA A . n A 1 16 ASN 16 39 39 ASN ASN A . n A 1 17 LYS 17 40 40 LYS LYS A . n A 1 18 THR 18 41 41 THR THR A . n A 1 19 ASP 19 42 42 ASP ASP A . n A 1 20 LEU 20 43 43 LEU LEU A . n A 1 21 PRO 21 44 44 PRO PRO A . n A 1 22 HIS 22 45 45 HIS HIS A . n A 1 23 VAL 23 46 46 VAL VAL A . n A 1 24 LEU 24 47 47 LEU LEU A . n A 1 25 LEU 25 48 48 LEU LEU A . n A 1 26 ILE 26 49 49 ILE ILE A . n A 1 27 GLY 27 50 50 GLY GLY A . n A 1 28 ASN 28 51 51 ASN ASN A . n A 1 29 SER 29 52 52 SER SER A . n A 1 30 ILE 30 53 53 ILE ILE A . n A 1 31 THR 31 54 54 THR THR A . n A 1 32 ARG 32 55 55 ARG ARG A . n A 1 33 GLY 33 56 56 GLY GLY A . n A 1 34 TYR 34 57 57 TYR TYR A . n A 1 35 TYR 35 58 58 TYR TYR A . n A 1 36 GLY 36 59 59 GLY GLY A . n A 1 37 LYS 37 60 60 LYS LYS A . n A 1 38 VAL 38 61 61 VAL VAL A . n A 1 39 GLU 39 62 62 GLU GLU A . n A 1 40 ALA 40 63 63 ALA ALA A . n A 1 41 ALA 41 64 64 ALA ALA A . n A 1 42 LEU 42 65 65 LEU LEU A . n A 1 43 LYS 43 66 66 LYS LYS A . n A 1 44 GLU 44 67 67 GLU GLU A . n A 1 45 LYS 45 68 68 LYS LYS A . n A 1 46 ALA 46 69 69 ALA ALA A . n A 1 47 TYR 47 70 70 TYR TYR A . n A 1 48 VAL 48 71 71 VAL VAL A . n A 1 49 GLY 49 72 72 GLY GLY A . n A 1 50 ARG 50 73 73 ARG ARG A . n A 1 51 LEU 51 74 74 LEU LEU A . n A 1 52 SER 52 75 75 SER SER A . n A 1 53 ASN 53 76 76 ASN ASN A . n A 1 54 SER 54 77 77 SER SER A . n A 1 55 LYS 55 78 78 LYS LYS A . n A 1 56 SER 56 79 79 SER SER A . n A 1 57 VAL 57 80 80 VAL VAL A . n A 1 58 GLY 58 81 81 GLY GLY A . n A 1 59 ASP 59 82 82 ASP ASP A . n A 1 60 PRO 60 83 83 PRO PRO A . n A 1 61 ALA 61 84 84 ALA ALA A . n A 1 62 LEU 62 85 85 LEU LEU A . n A 1 63 ILE 63 86 86 ILE ILE A . n A 1 64 GLU 64 87 87 GLU GLU A . n A 1 65 GLU 65 88 88 GLU GLU A . n A 1 66 LEU 66 89 89 LEU LEU A . n A 1 67 ALA 67 90 90 ALA ALA A . n A 1 68 VAL 68 91 91 VAL VAL A . n A 1 69 VAL 69 92 92 VAL VAL A . n A 1 70 LEU 70 93 93 LEU LEU A . n A 1 71 LYS 71 94 94 LYS LYS A . n A 1 72 ASN 72 95 95 ASN ASN A . n A 1 73 THR 73 96 96 THR THR A . n A 1 74 LYS 74 97 97 LYS LYS A . n A 1 75 PHE 75 98 98 PHE PHE A . n A 1 76 ASP 76 99 99 ASP ASP A . n A 1 77 VAL 77 100 100 VAL VAL A . n A 1 78 ILE 78 101 101 ILE ILE A . n A 1 79 HIS 79 102 102 HIS HIS A . n A 1 80 PHE 80 103 103 PHE PHE A . n A 1 81 ASN 81 104 104 ASN ASN A . n A 1 82 ASN 82 105 105 ASN ASN A . n A 1 83 GLY 83 106 106 GLY GLY A . n A 1 84 LEU 84 107 107 LEU LEU A . n A 1 85 HIS 85 108 108 HIS HIS A . n A 1 86 GLY 86 109 109 GLY GLY A . n A 1 87 PHE 87 110 110 PHE PHE A . n A 1 88 ASP 88 111 111 ASP ASP A . n A 1 89 TYR 89 112 112 TYR TYR A . n A 1 90 THR 90 113 113 THR THR A . n A 1 91 GLU 91 114 114 GLU GLU A . n A 1 92 GLU 92 115 115 GLU GLU A . n A 1 93 GLU 93 116 116 GLU GLU A . n A 1 94 TYR 94 117 117 TYR TYR A . n A 1 95 ASP 95 118 118 ASP ASP A . n A 1 96 LYS 96 119 119 LYS LYS A . n A 1 97 SER 97 120 120 SER SER A . n A 1 98 PHE 98 121 121 PHE PHE A . n A 1 99 PRO 99 122 122 PRO PRO A . n A 1 100 LYS 100 123 123 LYS LYS A . n A 1 101 LEU 101 124 124 LEU LEU A . n A 1 102 ILE 102 125 125 ILE ILE A . n A 1 103 LYS 103 126 126 LYS LYS A . n A 1 104 ILE 104 127 127 ILE ILE A . n A 1 105 ILE 105 128 128 ILE ILE A . n A 1 106 ARG 106 129 129 ARG ARG A . n A 1 107 LYS 107 130 130 LYS LYS A . n A 1 108 TYR 108 131 131 TYR TYR A . n A 1 109 ALA 109 132 132 ALA ALA A . n A 1 110 PRO 110 133 133 PRO PRO A . n A 1 111 LYS 111 134 134 LYS LYS A . n A 1 112 ALA 112 135 135 ALA ALA A . n A 1 113 LYS 113 136 136 LYS LYS A . n A 1 114 LEU 114 137 137 LEU LEU A . n A 1 115 ILE 115 138 138 ILE ILE A . n A 1 116 TRP 116 139 139 TRP TRP A . n A 1 117 ALA 117 140 140 ALA ALA A . n A 1 118 ASN 118 141 141 ASN ASN A . n A 1 119 THR 119 142 142 THR THR A . n A 1 120 THR 120 143 143 THR THR A . n A 1 121 PRO 121 144 144 PRO PRO A . n A 1 122 VAL 122 145 145 VAL VAL A . n A 1 123 ARG 123 146 146 ARG ARG A . n A 1 124 THR 124 147 147 THR THR A . n A 1 125 GLY 125 148 148 GLY GLY A . n A 1 126 GLU 126 149 149 GLU GLU A . n A 1 127 GLY 127 150 150 GLY GLY A . n A 1 128 MSE 128 151 151 MSE MSE A . n A 1 129 LYS 129 152 152 LYS LYS A . n A 1 130 GLU 130 153 153 GLU GLU A . n A 1 131 PHE 131 154 154 PHE PHE A . n A 1 132 ALA 132 155 155 ALA ALA A . n A 1 133 PRO 133 156 156 PRO PRO A . n A 1 134 ILE 134 157 157 ILE ILE A . n A 1 135 THR 135 158 158 THR THR A . n A 1 136 GLU 136 159 159 GLU GLU A . n A 1 137 ARG 137 160 160 ARG ARG A . n A 1 138 LEU 138 161 161 LEU LEU A . n A 1 139 ASN 139 162 162 ASN ASN A . n A 1 140 VAL 140 163 163 VAL VAL A . n A 1 141 ARG 141 164 164 ARG ARG A . n A 1 142 ASN 142 165 165 ASN ASN A . n A 1 143 GLN 143 166 166 GLN GLN A . n A 1 144 ILE 144 167 167 ILE ILE A . n A 1 145 ALA 145 168 168 ALA ALA A . n A 1 146 LEU 146 169 169 LEU LEU A . n A 1 147 LYS 147 170 170 LYS LYS A . n A 1 148 HIS 148 171 171 HIS HIS A . n A 1 149 ILE 149 172 172 ILE ILE A . n A 1 150 ASN 150 173 173 ASN ASN A . n A 1 151 ARG 151 174 174 ARG ARG A . n A 1 152 ALA 152 175 175 ALA ALA A . n A 1 153 SER 153 176 176 SER SER A . n A 1 154 ILE 154 177 177 ILE ILE A . n A 1 155 GLU 155 178 178 GLU GLU A . n A 1 156 VAL 156 179 179 VAL VAL A . n A 1 157 ASN 157 180 180 ASN ASN A . n A 1 158 ASP 158 181 181 ASP ASP A . n A 1 159 LEU 159 182 182 LEU LEU A . n A 1 160 TRP 160 183 183 TRP TRP A . n A 1 161 LYS 161 184 184 LYS LYS A . n A 1 162 VAL 162 185 185 VAL VAL A . n A 1 163 VAL 163 186 186 VAL VAL A . n A 1 164 ILE 164 187 187 ILE ILE A . n A 1 165 ASP 165 188 188 ASP ASP A . n A 1 166 HIS 166 189 189 HIS HIS A . n A 1 167 PRO 167 190 190 PRO PRO A . n A 1 168 GLU 168 191 191 GLU GLU A . n A 1 169 TYR 169 192 192 TYR TYR A . n A 1 170 TYR 170 193 193 TYR TYR A . n A 1 171 ALA 171 194 194 ALA ALA A . n A 1 172 GLY 172 195 195 GLY GLY A . n A 1 173 GLY 173 196 196 GLY GLY A . n A 1 174 ASP 174 197 197 ASP ASP A . n A 1 175 GLY 175 198 198 GLY GLY A . n A 1 176 THR 176 199 199 THR THR A . n A 1 177 HIS 177 200 200 HIS HIS A . n A 1 178 PRO 178 201 201 PRO PRO A . n A 1 179 ILE 179 202 202 ILE ILE A . n A 1 180 ASP 180 203 203 ASP ASP A . n A 1 181 ALA 181 204 204 ALA ALA A . n A 1 182 GLY 182 205 205 GLY GLY A . n A 1 183 TYR 183 206 206 TYR TYR A . n A 1 184 SER 184 207 207 SER SER A . n A 1 185 ALA 185 208 208 ALA ALA A . n A 1 186 LEU 186 209 209 LEU LEU A . n A 1 187 ALA 187 210 210 ALA ALA A . n A 1 188 ASN 188 211 211 ASN ASN A . n A 1 189 GLN 189 212 212 GLN GLN A . n A 1 190 VAL 190 213 213 VAL VAL A . n A 1 191 ILE 191 214 214 ILE ILE A . n A 1 192 LYS 192 215 215 LYS LYS A . n A 1 193 VAL 193 216 216 VAL VAL A . n A 1 194 ILE 194 217 217 ILE ILE A . n A 1 195 LYS 195 218 218 LYS LYS A . n A 1 196 ASN 196 219 219 ASN ASN A . n A 1 197 VAL 197 220 220 VAL VAL A . n A 1 198 LEU 198 221 221 LEU LEU A . n A 1 199 VAL 199 222 222 VAL VAL A . n A 1 200 HIS 200 223 223 HIS HIS A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UNL 1 301 301 UNL UNL A . C 3 GOL 1 302 302 GOL GOL A . D 4 IPA 1 303 303 IPA IPA A . E 5 HOH 1 401 304 HOH HOH A . E 5 HOH 2 402 305 HOH HOH A . E 5 HOH 3 403 306 HOH HOH A . E 5 HOH 4 404 307 HOH HOH A . E 5 HOH 5 405 308 HOH HOH A . E 5 HOH 6 406 309 HOH HOH A . E 5 HOH 7 407 310 HOH HOH A . E 5 HOH 8 408 311 HOH HOH A . E 5 HOH 9 409 312 HOH HOH A . E 5 HOH 10 410 313 HOH HOH A . E 5 HOH 11 411 314 HOH HOH A . E 5 HOH 12 412 315 HOH HOH A . E 5 HOH 13 413 316 HOH HOH A . E 5 HOH 14 414 317 HOH HOH A . E 5 HOH 15 415 318 HOH HOH A . E 5 HOH 16 416 319 HOH HOH A . E 5 HOH 17 417 320 HOH HOH A . E 5 HOH 18 418 321 HOH HOH A . E 5 HOH 19 419 322 HOH HOH A . E 5 HOH 20 420 323 HOH HOH A . E 5 HOH 21 421 324 HOH HOH A . E 5 HOH 22 422 325 HOH HOH A . E 5 HOH 23 423 326 HOH HOH A . E 5 HOH 24 424 327 HOH HOH A . E 5 HOH 25 425 328 HOH HOH A . E 5 HOH 26 426 329 HOH HOH A . E 5 HOH 27 427 330 HOH HOH A . E 5 HOH 28 428 331 HOH HOH A . E 5 HOH 29 429 332 HOH HOH A . E 5 HOH 30 430 333 HOH HOH A . E 5 HOH 31 431 334 HOH HOH A . E 5 HOH 32 432 335 HOH HOH A . E 5 HOH 33 433 336 HOH HOH A . E 5 HOH 34 434 337 HOH HOH A . E 5 HOH 35 435 338 HOH HOH A . E 5 HOH 36 436 339 HOH HOH A . E 5 HOH 37 437 340 HOH HOH A . E 5 HOH 38 438 341 HOH HOH A . E 5 HOH 39 439 342 HOH HOH A . E 5 HOH 40 440 343 HOH HOH A . E 5 HOH 41 441 344 HOH HOH A . E 5 HOH 42 442 345 HOH HOH A . E 5 HOH 43 443 346 HOH HOH A . E 5 HOH 44 444 347 HOH HOH A . E 5 HOH 45 445 348 HOH HOH A . E 5 HOH 46 446 349 HOH HOH A . E 5 HOH 47 447 350 HOH HOH A . E 5 HOH 48 448 351 HOH HOH A . E 5 HOH 49 449 352 HOH HOH A . E 5 HOH 50 450 353 HOH HOH A . E 5 HOH 51 451 354 HOH HOH A . E 5 HOH 52 452 355 HOH HOH A . E 5 HOH 53 453 356 HOH HOH A . E 5 HOH 54 454 357 HOH HOH A . E 5 HOH 55 455 358 HOH HOH A . E 5 HOH 56 456 359 HOH HOH A . E 5 HOH 57 457 360 HOH HOH A . E 5 HOH 58 458 361 HOH HOH A . E 5 HOH 59 459 362 HOH HOH A . E 5 HOH 60 460 363 HOH HOH A . E 5 HOH 61 461 364 HOH HOH A . E 5 HOH 62 462 365 HOH HOH A . E 5 HOH 63 463 366 HOH HOH A . E 5 HOH 64 464 367 HOH HOH A . E 5 HOH 65 465 368 HOH HOH A . E 5 HOH 66 466 369 HOH HOH A . E 5 HOH 67 467 370 HOH HOH A . E 5 HOH 68 468 371 HOH HOH A . E 5 HOH 69 469 372 HOH HOH A . E 5 HOH 70 470 373 HOH HOH A . E 5 HOH 71 471 374 HOH HOH A . E 5 HOH 72 472 375 HOH HOH A . E 5 HOH 73 473 376 HOH HOH A . E 5 HOH 74 474 377 HOH HOH A . E 5 HOH 75 475 378 HOH HOH A . E 5 HOH 76 476 379 HOH HOH A . E 5 HOH 77 477 380 HOH HOH A . E 5 HOH 78 478 381 HOH HOH A . E 5 HOH 79 479 382 HOH HOH A . E 5 HOH 80 480 383 HOH HOH A . E 5 HOH 81 481 384 HOH HOH A . E 5 HOH 82 482 385 HOH HOH A . E 5 HOH 83 483 386 HOH HOH A . E 5 HOH 84 484 387 HOH HOH A . E 5 HOH 85 485 388 HOH HOH A . E 5 HOH 86 486 389 HOH HOH A . E 5 HOH 87 487 390 HOH HOH A . E 5 HOH 88 488 391 HOH HOH A . E 5 HOH 89 489 392 HOH HOH A . E 5 HOH 90 490 393 HOH HOH A . E 5 HOH 91 491 394 HOH HOH A . E 5 HOH 92 492 395 HOH HOH A . E 5 HOH 93 493 396 HOH HOH A . E 5 HOH 94 494 397 HOH HOH A . E 5 HOH 95 495 398 HOH HOH A . E 5 HOH 96 496 399 HOH HOH A . E 5 HOH 97 497 400 HOH HOH A . E 5 HOH 98 498 401 HOH HOH A . E 5 HOH 99 499 402 HOH HOH A . E 5 HOH 100 500 403 HOH HOH A . E 5 HOH 101 501 404 HOH HOH A . E 5 HOH 102 502 405 HOH HOH A . E 5 HOH 103 503 406 HOH HOH A . E 5 HOH 104 504 407 HOH HOH A . E 5 HOH 105 505 408 HOH HOH A . E 5 HOH 106 506 409 HOH HOH A . E 5 HOH 107 507 410 HOH HOH A . E 5 HOH 108 508 411 HOH HOH A . E 5 HOH 109 509 412 HOH HOH A . E 5 HOH 110 510 413 HOH HOH A . E 5 HOH 111 511 414 HOH HOH A . E 5 HOH 112 512 415 HOH HOH A . E 5 HOH 113 513 416 HOH HOH A . E 5 HOH 114 514 417 HOH HOH A . E 5 HOH 115 515 418 HOH HOH A . E 5 HOH 116 516 419 HOH HOH A . E 5 HOH 117 517 420 HOH HOH A . E 5 HOH 118 518 421 HOH HOH A . E 5 HOH 119 519 422 HOH HOH A . E 5 HOH 120 520 423 HOH HOH A . E 5 HOH 121 521 424 HOH HOH A . E 5 HOH 122 522 425 HOH HOH A . E 5 HOH 123 523 426 HOH HOH A . E 5 HOH 124 524 427 HOH HOH A . E 5 HOH 125 525 428 HOH HOH A . E 5 HOH 126 526 429 HOH HOH A . E 5 HOH 127 527 430 HOH HOH A . E 5 HOH 128 528 431 HOH HOH A . E 5 HOH 129 529 432 HOH HOH A . E 5 HOH 130 530 433 HOH HOH A . E 5 HOH 131 531 434 HOH HOH A . E 5 HOH 132 532 435 HOH HOH A . E 5 HOH 133 533 436 HOH HOH A . E 5 HOH 134 534 437 HOH HOH A . E 5 HOH 135 535 438 HOH HOH A . E 5 HOH 136 536 439 HOH HOH A . E 5 HOH 137 537 440 HOH HOH A . E 5 HOH 138 538 441 HOH HOH A . E 5 HOH 139 539 442 HOH HOH A . E 5 HOH 140 540 443 HOH HOH A . E 5 HOH 141 541 444 HOH HOH A . E 5 HOH 142 542 445 HOH HOH A . E 5 HOH 143 543 446 HOH HOH A . E 5 HOH 144 544 447 HOH HOH A . E 5 HOH 145 545 448 HOH HOH A . E 5 HOH 146 546 449 HOH HOH A . E 5 HOH 147 547 450 HOH HOH A . E 5 HOH 148 548 451 HOH HOH A . E 5 HOH 149 549 452 HOH HOH A . E 5 HOH 150 550 453 HOH HOH A . E 5 HOH 151 551 454 HOH HOH A . E 5 HOH 152 552 455 HOH HOH A . E 5 HOH 153 553 456 HOH HOH A . E 5 HOH 154 554 457 HOH HOH A . E 5 HOH 155 555 458 HOH HOH A . E 5 HOH 156 556 459 HOH HOH A . E 5 HOH 157 557 460 HOH HOH A . E 5 HOH 158 558 461 HOH HOH A . E 5 HOH 159 559 462 HOH HOH A . E 5 HOH 160 560 463 HOH HOH A . E 5 HOH 161 561 464 HOH HOH A . E 5 HOH 162 562 465 HOH HOH A . E 5 HOH 163 563 466 HOH HOH A . E 5 HOH 164 564 467 HOH HOH A . E 5 HOH 165 565 468 HOH HOH A . E 5 HOH 166 566 469 HOH HOH A . E 5 HOH 167 567 470 HOH HOH A . E 5 HOH 168 568 471 HOH HOH A . E 5 HOH 169 569 472 HOH HOH A . E 5 HOH 170 570 473 HOH HOH A . E 5 HOH 171 571 474 HOH HOH A . E 5 HOH 172 572 475 HOH HOH A . E 5 HOH 173 573 476 HOH HOH A . E 5 HOH 174 574 477 HOH HOH A . E 5 HOH 175 575 478 HOH HOH A . E 5 HOH 176 576 479 HOH HOH A . E 5 HOH 177 577 480 HOH HOH A . E 5 HOH 178 578 481 HOH HOH A . E 5 HOH 179 579 482 HOH HOH A . E 5 HOH 180 580 483 HOH HOH A . E 5 HOH 181 581 484 HOH HOH A . E 5 HOH 182 582 485 HOH HOH A . E 5 HOH 183 583 486 HOH HOH A . E 5 HOH 184 584 487 HOH HOH A . E 5 HOH 185 585 488 HOH HOH A . E 5 HOH 186 586 489 HOH HOH A . E 5 HOH 187 587 490 HOH HOH A . E 5 HOH 188 588 491 HOH HOH A . E 5 HOH 189 589 492 HOH HOH A . E 5 HOH 190 590 493 HOH HOH A . E 5 HOH 191 591 494 HOH HOH A . E 5 HOH 192 592 495 HOH HOH A . E 5 HOH 193 593 496 HOH HOH A . E 5 HOH 194 594 497 HOH HOH A . E 5 HOH 195 595 498 HOH HOH A . E 5 HOH 196 596 499 HOH HOH A . E 5 HOH 197 597 500 HOH HOH A . E 5 HOH 198 598 501 HOH HOH A . E 5 HOH 199 599 502 HOH HOH A . E 5 HOH 200 600 503 HOH HOH A . E 5 HOH 201 601 504 HOH HOH A . E 5 HOH 202 602 505 HOH HOH A . E 5 HOH 203 603 506 HOH HOH A . E 5 HOH 204 604 507 HOH HOH A . E 5 HOH 205 605 508 HOH HOH A . E 5 HOH 206 606 509 HOH HOH A . E 5 HOH 207 607 510 HOH HOH A . E 5 HOH 208 608 511 HOH HOH A . E 5 HOH 209 609 512 HOH HOH A . E 5 HOH 210 610 513 HOH HOH A . E 5 HOH 211 611 514 HOH HOH A . E 5 HOH 212 612 515 HOH HOH A . E 5 HOH 213 613 516 HOH HOH A . E 5 HOH 214 614 517 HOH HOH A . E 5 HOH 215 615 518 HOH HOH A . E 5 HOH 216 616 519 HOH HOH A . E 5 HOH 217 617 520 HOH HOH A . E 5 HOH 218 618 521 HOH HOH A . E 5 HOH 219 619 522 HOH HOH A . E 5 HOH 220 620 523 HOH HOH A . E 5 HOH 221 621 524 HOH HOH A . E 5 HOH 222 622 525 HOH HOH A . E 5 HOH 223 623 526 HOH HOH A . E 5 HOH 224 624 527 HOH HOH A . E 5 HOH 225 625 528 HOH HOH A . E 5 HOH 226 626 529 HOH HOH A . E 5 HOH 227 627 530 HOH HOH A . E 5 HOH 228 628 531 HOH HOH A . E 5 HOH 229 629 532 HOH HOH A . E 5 HOH 230 630 533 HOH HOH A . E 5 HOH 231 631 534 HOH HOH A . E 5 HOH 232 632 535 HOH HOH A . E 5 HOH 233 633 536 HOH HOH A . E 5 HOH 234 634 537 HOH HOH A . E 5 HOH 235 635 538 HOH HOH A . E 5 HOH 236 636 539 HOH HOH A . E 5 HOH 237 637 540 HOH HOH A . E 5 HOH 238 638 541 HOH HOH A . E 5 HOH 239 639 542 HOH HOH A . E 5 HOH 240 640 543 HOH HOH A . E 5 HOH 241 641 544 HOH HOH A . E 5 HOH 242 642 545 HOH HOH A . E 5 HOH 243 643 546 HOH HOH A . E 5 HOH 244 644 547 HOH HOH A . E 5 HOH 245 645 548 HOH HOH A . E 5 HOH 246 646 549 HOH HOH A . E 5 HOH 247 647 550 HOH HOH A . E 5 HOH 248 648 551 HOH HOH A . E 5 HOH 249 649 552 HOH HOH A . E 5 HOH 250 650 553 HOH HOH A . E 5 HOH 251 651 554 HOH HOH A . E 5 HOH 252 652 555 HOH HOH A . E 5 HOH 253 653 556 HOH HOH A . E 5 HOH 254 654 557 HOH HOH A . E 5 HOH 255 655 558 HOH HOH A . E 5 HOH 256 656 559 HOH HOH A . E 5 HOH 257 657 560 HOH HOH A . E 5 HOH 258 658 561 HOH HOH A . E 5 HOH 259 659 562 HOH HOH A . E 5 HOH 260 660 563 HOH HOH A . E 5 HOH 261 661 564 HOH HOH A . E 5 HOH 262 662 565 HOH HOH A . E 5 HOH 263 663 566 HOH HOH A . E 5 HOH 264 664 567 HOH HOH A . E 5 HOH 265 665 568 HOH HOH A . E 5 HOH 266 666 569 HOH HOH A . E 5 HOH 267 667 570 HOH HOH A . E 5 HOH 268 668 571 HOH HOH A . E 5 HOH 269 669 572 HOH HOH A . E 5 HOH 270 670 573 HOH HOH A . E 5 HOH 271 671 574 HOH HOH A . E 5 HOH 272 672 575 HOH HOH A . E 5 HOH 273 673 576 HOH HOH A . E 5 HOH 274 674 577 HOH HOH A . E 5 HOH 275 675 578 HOH HOH A . E 5 HOH 276 676 579 HOH HOH A . E 5 HOH 277 677 580 HOH HOH A . E 5 HOH 278 678 581 HOH HOH A . E 5 HOH 279 679 582 HOH HOH A . E 5 HOH 280 680 583 HOH HOH A . E 5 HOH 281 681 584 HOH HOH A . E 5 HOH 282 682 585 HOH HOH A . E 5 HOH 283 683 586 HOH HOH A . E 5 HOH 284 684 587 HOH HOH A . E 5 HOH 285 685 588 HOH HOH A . E 5 HOH 286 686 589 HOH HOH A . E 5 HOH 287 687 590 HOH HOH A . E 5 HOH 288 688 591 HOH HOH A . E 5 HOH 289 689 592 HOH HOH A . E 5 HOH 290 690 593 HOH HOH A . E 5 HOH 291 691 594 HOH HOH A . E 5 HOH 292 692 595 HOH HOH A . E 5 HOH 293 693 596 HOH HOH A . E 5 HOH 294 694 597 HOH HOH A . E 5 HOH 295 695 598 HOH HOH A . E 5 HOH 296 696 599 HOH HOH A . E 5 HOH 297 697 600 HOH HOH A . E 5 HOH 298 698 601 HOH HOH A . E 5 HOH 299 699 602 HOH HOH A . E 5 HOH 300 700 603 HOH HOH A . E 5 HOH 301 701 604 HOH HOH A . E 5 HOH 302 702 605 HOH HOH A . E 5 HOH 303 703 606 HOH HOH A . E 5 HOH 304 704 607 HOH HOH A . E 5 HOH 305 705 608 HOH HOH A . E 5 HOH 306 706 609 HOH HOH A . E 5 HOH 307 707 610 HOH HOH A . E 5 HOH 308 708 611 HOH HOH A . E 5 HOH 309 709 612 HOH HOH A . E 5 HOH 310 710 613 HOH HOH A . E 5 HOH 311 711 614 HOH HOH A . E 5 HOH 312 712 615 HOH HOH A . E 5 HOH 313 713 616 HOH HOH A . E 5 HOH 314 714 617 HOH HOH A . E 5 HOH 315 715 618 HOH HOH A . E 5 HOH 316 716 619 HOH HOH A . E 5 HOH 317 717 620 HOH HOH A . E 5 HOH 318 718 621 HOH HOH A . E 5 HOH 319 719 622 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 128 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 151 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3130 ? 1 MORE -9 ? 1 'SSA (A^2)' 17280 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 64.0940000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 714 ? E HOH . 2 1 A HOH 715 ? E HOH . 3 1 A HOH 717 ? E HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-10-17 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' database_2 3 3 'Structure model' struct_conn 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.name' 3 3 'Structure model' '_database_2.pdbx_DOI' 4 3 'Structure model' '_database_2.pdbx_database_accession' 5 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 3 'Structure model' '_struct_ref_seq_dif.details' 7 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 17.3800 _pdbx_refine_tls.origin_y 19.5690 _pdbx_refine_tls.origin_z 17.6020 _pdbx_refine_tls.T[1][1] 0.0099 _pdbx_refine_tls.T[2][2] 0.0284 _pdbx_refine_tls.T[3][3] 0.0219 _pdbx_refine_tls.T[1][2] -0.0038 _pdbx_refine_tls.T[1][3] 0.0046 _pdbx_refine_tls.T[2][3] -0.0081 _pdbx_refine_tls.L[1][1] 0.5424 _pdbx_refine_tls.L[2][2] 0.2450 _pdbx_refine_tls.L[3][3] 1.3654 _pdbx_refine_tls.L[1][2] -0.1414 _pdbx_refine_tls.L[1][3] 0.1022 _pdbx_refine_tls.L[2][3] -0.1313 _pdbx_refine_tls.S[1][1] -0.0254 _pdbx_refine_tls.S[2][2] 0.0320 _pdbx_refine_tls.S[3][3] -0.0066 _pdbx_refine_tls.S[1][2] -0.0161 _pdbx_refine_tls.S[1][3] -0.0165 _pdbx_refine_tls.S[2][3] -0.0164 _pdbx_refine_tls.S[2][1] 0.0025 _pdbx_refine_tls.S[3][1] -0.0025 _pdbx_refine_tls.S[3][2] 0.0221 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 0 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 223 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'December 29, 2011' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 REFMAC 5.5.0110 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 4H08 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 25-223 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 51 ? ? -124.89 -150.36 2 1 ASN A 51 ? ? -124.89 -150.21 3 1 GLU A 67 ? ? 67.04 -0.82 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'UNKNOWN LIGAND' UNL 3 GLYCEROL GOL 4 'ISOPROPYL ALCOHOL' IPA 5 water HOH #