data_4HD9 # _entry.id 4HD9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4HD9 RCSB RCSB075320 WWPDB D_1000075320 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4HBQ . unspecified PDB 4HCR . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4HD9 _pdbx_database_status.recvd_initial_deposition_date 2012-10-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Springer, T.' 1 'Yu, Y.' 2 'Zhu, J.' 3 # _citation.id primary _citation.title 'A Different Fold with an Integrin-Binding Loop Specialized for Flexibility in Mucosal Addressin Cell Adhesion Molecule-1' _citation.journal_abbrev 'TO BE PUBLISHED' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Springer, T.' 1 ? primary 'Yu, Y.' 2 ? primary 'Zhu, J.' 3 ? primary 'Wang, J.-H.' 4 ? primary 'Huang, P.-S.' 5 ? # _cell.entry_id 4HD9 _cell.length_a 64.476 _cell.length_b 99.988 _cell.length_c 69.668 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4HD9 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Mucosal addressin cell adhesion molecule 1' 22348.314 1 ? ? ? ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 3 water nat water 18.015 247 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MAdCAM-1, hMAdCAM-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VKPLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT FQHTVQLLVYAFPNQLTVSPAALVPGDPEVACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVL FRVTERWRLPPLGTPVPPALYCQATMRLPGLELSHRQAIPVLHHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;VKPLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT FQHTVQLLVYAFPNQLTVSPAALVPGDPEVACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVL FRVTERWRLPPLGTPVPPALYCQATMRLPGLELSHRQAIPVLHHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 LYS n 1 3 PRO n 1 4 LEU n 1 5 GLN n 1 6 VAL n 1 7 GLU n 1 8 PRO n 1 9 PRO n 1 10 GLU n 1 11 PRO n 1 12 VAL n 1 13 VAL n 1 14 ALA n 1 15 VAL n 1 16 ALA n 1 17 LEU n 1 18 GLY n 1 19 ALA n 1 20 SER n 1 21 ARG n 1 22 GLN n 1 23 LEU n 1 24 THR n 1 25 CYS n 1 26 ARG n 1 27 LEU n 1 28 ALA n 1 29 CYS n 1 30 ALA n 1 31 ASP n 1 32 ARG n 1 33 GLY n 1 34 ALA n 1 35 SER n 1 36 VAL n 1 37 GLN n 1 38 TRP n 1 39 ARG n 1 40 GLY n 1 41 LEU n 1 42 ASP n 1 43 THR n 1 44 SER n 1 45 LEU n 1 46 GLY n 1 47 ALA n 1 48 VAL n 1 49 GLN n 1 50 SER n 1 51 ASP n 1 52 THR n 1 53 GLY n 1 54 ARG n 1 55 SER n 1 56 VAL n 1 57 LEU n 1 58 THR n 1 59 VAL n 1 60 ARG n 1 61 ASN n 1 62 ALA n 1 63 SER n 1 64 LEU n 1 65 SER n 1 66 ALA n 1 67 ALA n 1 68 GLY n 1 69 THR n 1 70 ARG n 1 71 VAL n 1 72 CYS n 1 73 VAL n 1 74 GLY n 1 75 SER n 1 76 CYS n 1 77 GLY n 1 78 GLY n 1 79 ARG n 1 80 THR n 1 81 PHE n 1 82 GLN n 1 83 HIS n 1 84 THR n 1 85 VAL n 1 86 GLN n 1 87 LEU n 1 88 LEU n 1 89 VAL n 1 90 TYR n 1 91 ALA n 1 92 PHE n 1 93 PRO n 1 94 ASN n 1 95 GLN n 1 96 LEU n 1 97 THR n 1 98 VAL n 1 99 SER n 1 100 PRO n 1 101 ALA n 1 102 ALA n 1 103 LEU n 1 104 VAL n 1 105 PRO n 1 106 GLY n 1 107 ASP n 1 108 PRO n 1 109 GLU n 1 110 VAL n 1 111 ALA n 1 112 CYS n 1 113 THR n 1 114 ALA n 1 115 HIS n 1 116 LYS n 1 117 VAL n 1 118 THR n 1 119 PRO n 1 120 VAL n 1 121 ASP n 1 122 PRO n 1 123 ASN n 1 124 ALA n 1 125 LEU n 1 126 SER n 1 127 PHE n 1 128 SER n 1 129 LEU n 1 130 LEU n 1 131 VAL n 1 132 GLY n 1 133 GLY n 1 134 GLN n 1 135 GLU n 1 136 LEU n 1 137 GLU n 1 138 GLY n 1 139 ALA n 1 140 GLN n 1 141 ALA n 1 142 LEU n 1 143 GLY n 1 144 PRO n 1 145 GLU n 1 146 VAL n 1 147 GLN n 1 148 GLU n 1 149 GLU n 1 150 GLU n 1 151 GLU n 1 152 GLU n 1 153 PRO n 1 154 GLN n 1 155 GLY n 1 156 ASP n 1 157 GLU n 1 158 ASP n 1 159 VAL n 1 160 LEU n 1 161 PHE n 1 162 ARG n 1 163 VAL n 1 164 THR n 1 165 GLU n 1 166 ARG n 1 167 TRP n 1 168 ARG n 1 169 LEU n 1 170 PRO n 1 171 PRO n 1 172 LEU n 1 173 GLY n 1 174 THR n 1 175 PRO n 1 176 VAL n 1 177 PRO n 1 178 PRO n 1 179 ALA n 1 180 LEU n 1 181 TYR n 1 182 CYS n 1 183 GLN n 1 184 ALA n 1 185 THR n 1 186 MET n 1 187 ARG n 1 188 LEU n 1 189 PRO n 1 190 GLY n 1 191 LEU n 1 192 GLU n 1 193 LEU n 1 194 SER n 1 195 HIS n 1 196 ARG n 1 197 GLN n 1 198 ALA n 1 199 ILE n 1 200 PRO n 1 201 VAL n 1 202 LEU n 1 203 HIS n 1 204 HIS n 1 205 HIS n 1 206 HIS n 1 207 HIS n 1 208 HIS n 1 209 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MADCAM1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'Chinese hamster' _entity_src_gen.pdbx_host_org_scientific_name 'Cricetulus griseus' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 10029 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ OVARY _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Lec3.2.8.1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MADCA_HUMAN _struct_ref.pdbx_db_accession Q13477 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VKPLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT FQHTVQLLVYAFPDQLTVSPAALVPGDPEVACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVL FRVTERWRLPPLGTPVPPALYCQATMRLPGLELSHRQAIPVLH ; _struct_ref.pdbx_align_begin 23 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4HD9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 203 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q13477 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 225 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 203 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4HD9 ASN A 94 ? UNP Q13477 ASP 116 'engineered mutation' 94 1 1 4HD9 HIS A 204 ? UNP Q13477 ? ? 'expression tag' 204 2 1 4HD9 HIS A 205 ? UNP Q13477 ? ? 'expression tag' 205 3 1 4HD9 HIS A 206 ? UNP Q13477 ? ? 'expression tag' 206 4 1 4HD9 HIS A 207 ? UNP Q13477 ? ? 'expression tag' 207 5 1 4HD9 HIS A 208 ? UNP Q13477 ? ? 'expression tag' 208 6 1 4HD9 HIS A 209 ? UNP Q13477 ? ? 'expression tag' 209 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4HD9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_percent_sol 51.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '10% PEG4K, 0.5M Li2SO4, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2003-03-31 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ;Cryogenically-cooled double crystal Si(111) monochromator. ; _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 4HD9 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F 0.000 _reflns.d_resolution_low 22.560 _reflns.d_resolution_high 1.7 _reflns.number_obs 23698 _reflns.number_all 23698 _reflns.percent_possible_obs 72.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4HD9 _refine.ls_number_reflns_obs 22754 _refine.ls_number_reflns_all 22754 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 22.560 _refine.ls_d_res_high 1.700 _refine.ls_percent_reflns_obs 90.65 _refine.ls_R_factor_obs 0.1753 _refine.ls_R_factor_all 0.1770 _refine.ls_R_factor_R_work 0.1711 _refine.ls_R_factor_R_free 0.2144 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.81 _refine.ls_number_reflns_R_free 2232 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.16 _refine.pdbx_overall_phase_error 20.95 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1466 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 247 _refine_hist.number_atoms_total 1727 _refine_hist.d_res_high 1.700 _refine_hist.d_res_low 22.560 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.009 ? ? 1692 ? 'X-RAY DIFFRACTION' f_angle_d 1.341 ? ? 2335 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.350 ? ? 648 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.072 ? ? 277 ? 'X-RAY DIFFRACTION' f_plane_restr 0.007 ? ? 315 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.700 1.7371 490 0.2357 36.00 0.2885 . . 51 . . . . 'X-RAY DIFFRACTION' . 1.7371 1.7775 787 0.2568 57.00 0.3667 . . 85 . . . . 'X-RAY DIFFRACTION' . 1.7775 1.8219 1134 0.2378 80.00 0.2384 . . 111 . . . . 'X-RAY DIFFRACTION' . 1.8219 1.8712 1300 0.2237 93.00 0.2641 . . 164 . . . . 'X-RAY DIFFRACTION' . 1.8712 1.9262 1353 0.1974 96.00 0.2150 . . 118 . . . . 'X-RAY DIFFRACTION' . 1.9262 1.9883 1393 0.1782 99.00 0.2048 . . 163 . . . . 'X-RAY DIFFRACTION' . 1.9883 2.0593 1382 0.1771 99.00 0.2273 . . 148 . . . . 'X-RAY DIFFRACTION' . 2.0593 2.1417 1382 0.1588 100.00 0.2018 . . 153 . . . . 'X-RAY DIFFRACTION' . 2.1417 2.2391 1379 0.1567 99.00 0.1872 . . 172 . . . . 'X-RAY DIFFRACTION' . 2.2391 2.3571 1428 0.1625 100.00 0.2029 . . 142 . . . . 'X-RAY DIFFRACTION' . 2.3571 2.5046 1389 0.1727 99.00 0.2344 . . 162 . . . . 'X-RAY DIFFRACTION' . 2.5046 2.6976 1416 0.1709 99.00 0.2253 . . 160 . . . . 'X-RAY DIFFRACTION' . 2.6976 2.9686 1410 0.1594 99.00 0.2269 . . 151 . . . . 'X-RAY DIFFRACTION' . 2.9686 3.3969 1413 0.1632 98.00 0.2207 . . 144 . . . . 'X-RAY DIFFRACTION' . 3.3969 4.2749 1425 0.1544 98.00 0.1944 . . 143 . . . . 'X-RAY DIFFRACTION' . 4.2749 22.5615 1441 0.1783 96.00 0.2037 . . 165 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4HD9 _struct.title 'Crystal structure of native human MAdCAM-1 D1D2 domain' _struct.pdbx_descriptor 'Mucosal addressin cell adhesion molecule 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4HD9 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'immunoglobulin superfamily, rolling and firm adhesion, integrin alpha4beta7, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 63 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ALA _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 67 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 63 _struct_conf.end_auth_comp_id ALA _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 67 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 72 SG ? ? A CYS 25 A CYS 72 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf2 disulf ? ? A CYS 29 SG ? ? ? 1_555 A CYS 76 SG ? ? A CYS 29 A CYS 76 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf3 disulf ? ? A CYS 112 SG ? ? ? 1_555 A CYS 182 SG ? ? A CYS 112 A CYS 182 1_555 ? ? ? ? ? ? ? 2.062 ? ? covale1 covale one ? A ASN 61 ND2 A ? ? 1_555 B NAG . C1 A ? A ASN 61 A NAG 2061 1_555 ? ? ? ? ? ? ? 1.451 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLU 7 A . ? GLU 7 A PRO 8 A ? PRO 8 A 1 -4.99 2 GLU 7 A . ? GLU 7 A PRO 8 A ? PRO 8 A 1 2.55 3 SER 99 A . ? SER 99 A PRO 100 A ? PRO 100 A 1 -4.06 4 THR 118 A . ? THR 118 A PRO 119 A ? PRO 119 A 1 -2.11 5 THR 174 A . ? THR 174 A PRO 175 A ? PRO 175 A 1 3.46 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 4 ? D ? 4 ? E ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 4 ? GLU A 7 ? LEU A 4 GLU A 7 A 2 ARG A 21 ? LEU A 27 ? ARG A 21 LEU A 27 A 3 ARG A 54 ? VAL A 59 ? ARG A 54 VAL A 59 B 1 VAL A 12 ? ALA A 16 ? VAL A 12 ALA A 16 B 2 ARG A 79 ? TYR A 90 ? ARG A 79 TYR A 90 B 3 GLY A 68 ? CYS A 76 ? GLY A 68 CYS A 76 B 4 SER A 35 ? ARG A 39 ? SER A 35 ARG A 39 B 5 VAL A 48 ? ASP A 51 ? VAL A 48 ASP A 51 C 1 GLN A 95 ? SER A 99 ? GLN A 95 SER A 99 C 2 GLU A 109 ? VAL A 117 ? GLU A 109 VAL A 117 C 3 PHE A 161 ? ARG A 168 ? PHE A 161 ARG A 168 C 4 GLN A 140 ? ALA A 141 ? GLN A 140 ALA A 141 D 1 GLN A 95 ? SER A 99 ? GLN A 95 SER A 99 D 2 GLU A 109 ? VAL A 117 ? GLU A 109 VAL A 117 D 3 PHE A 161 ? ARG A 168 ? PHE A 161 ARG A 168 D 4 GLU A 145 ? GLU A 148 ? GLU A 145 GLU A 148 E 1 GLN A 134 ? GLU A 135 ? GLN A 134 GLU A 135 E 2 LEU A 125 ? VAL A 131 ? LEU A 125 VAL A 131 E 3 ALA A 179 ? LEU A 188 ? ALA A 179 LEU A 188 E 4 LEU A 191 ? PRO A 200 ? LEU A 191 PRO A 200 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 5 ? N GLN A 5 O ARG A 26 ? O ARG A 26 A 2 3 N LEU A 23 ? N LEU A 23 O LEU A 57 ? O LEU A 57 B 1 2 N VAL A 15 ? N VAL A 15 O LEU A 88 ? O LEU A 88 B 2 3 O VAL A 85 ? O VAL A 85 N ARG A 70 ? N ARG A 70 B 3 4 O VAL A 73 ? O VAL A 73 N GLN A 37 ? N GLN A 37 B 4 5 N TRP A 38 ? N TRP A 38 O VAL A 48 ? O VAL A 48 C 1 2 N THR A 97 ? N THR A 97 O THR A 113 ? O THR A 113 C 2 3 N ALA A 114 ? N ALA A 114 O VAL A 163 ? O VAL A 163 C 3 4 O ARG A 168 ? O ARG A 168 N GLN A 140 ? N GLN A 140 D 1 2 N THR A 97 ? N THR A 97 O THR A 113 ? O THR A 113 D 2 3 N ALA A 114 ? N ALA A 114 O VAL A 163 ? O VAL A 163 D 3 4 O ARG A 162 ? O ARG A 162 N GLN A 147 ? N GLN A 147 E 1 2 O GLN A 134 ? O GLN A 134 N VAL A 131 ? N VAL A 131 E 2 3 N SER A 126 ? N SER A 126 O THR A 185 ? O THR A 185 E 3 4 N LEU A 180 ? N LEU A 180 O ILE A 199 ? O ILE A 199 # _database_PDB_matrix.entry_id 4HD9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4HD9 _atom_sites.fract_transf_matrix[1][1] 0.015510 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010001 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014354 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 1 VAL VAL A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 CYS 25 25 25 CYS CYS A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 CYS 29 29 29 CYS CYS A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 TRP 38 38 38 TRP TRP A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 CYS 72 72 72 CYS CYS A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 CYS 76 76 76 CYS CYS A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 HIS 83 83 83 HIS HIS A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 ASN 94 94 94 ASN ASN A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 CYS 112 112 112 CYS CYS A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 HIS 115 115 115 HIS HIS A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 ASN 123 123 123 ASN ASN A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 PHE 127 127 127 PHE PHE A . n A 1 128 SER 128 128 128 SER SER A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 GLN 134 134 134 GLN GLN A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 GLN 140 140 140 GLN GLN A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 GLU 145 145 145 GLU GLU A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 GLN 147 147 147 GLN GLN A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 GLU 152 152 ? ? ? A . n A 1 153 PRO 153 153 ? ? ? A . n A 1 154 GLN 154 154 ? ? ? A . n A 1 155 GLY 155 155 ? ? ? A . n A 1 156 ASP 156 156 ? ? ? A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 ASP 158 158 158 ASP ASP A . n A 1 159 VAL 159 159 159 VAL VAL A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 PHE 161 161 161 PHE PHE A . n A 1 162 ARG 162 162 162 ARG ARG A . n A 1 163 VAL 163 163 163 VAL VAL A . n A 1 164 THR 164 164 164 THR THR A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 TRP 167 167 167 TRP TRP A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 PRO 170 170 170 PRO PRO A . n A 1 171 PRO 171 171 171 PRO PRO A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 THR 174 174 174 THR THR A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 VAL 176 176 176 VAL VAL A . n A 1 177 PRO 177 177 177 PRO PRO A . n A 1 178 PRO 178 178 178 PRO PRO A . n A 1 179 ALA 179 179 179 ALA ALA A . n A 1 180 LEU 180 180 180 LEU LEU A . n A 1 181 TYR 181 181 181 TYR TYR A . n A 1 182 CYS 182 182 182 CYS CYS A . n A 1 183 GLN 183 183 183 GLN GLN A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 THR 185 185 185 THR THR A . n A 1 186 MET 186 186 186 MET MET A . n A 1 187 ARG 187 187 187 ARG ARG A . n A 1 188 LEU 188 188 188 LEU LEU A . n A 1 189 PRO 189 189 189 PRO PRO A . n A 1 190 GLY 190 190 190 GLY GLY A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 HIS 195 195 195 HIS HIS A . n A 1 196 ARG 196 196 196 ARG ARG A . n A 1 197 GLN 197 197 197 GLN GLN A . n A 1 198 ALA 198 198 198 ALA ALA A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 LEU 202 202 202 LEU LEU A . n A 1 203 HIS 203 203 203 HIS HIS A . n A 1 204 HIS 204 204 ? ? ? A . n A 1 205 HIS 205 205 ? ? ? A . n A 1 206 HIS 206 206 ? ? ? A . n A 1 207 HIS 207 207 ? ? ? A . n A 1 208 HIS 208 208 ? ? ? A . n A 1 209 HIS 209 209 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 2061 2061 NAG NAG A . C 3 HOH 1 401 1 HOH HOH A . C 3 HOH 2 402 2 HOH HOH A . C 3 HOH 3 403 3 HOH HOH A . C 3 HOH 4 404 4 HOH HOH A . C 3 HOH 5 405 5 HOH HOH A . C 3 HOH 6 406 6 HOH HOH A . C 3 HOH 7 407 7 HOH HOH A . C 3 HOH 8 408 8 HOH HOH A . C 3 HOH 9 409 9 HOH HOH A . C 3 HOH 10 410 10 HOH HOH A . C 3 HOH 11 411 11 HOH HOH A . C 3 HOH 12 412 12 HOH HOH A . C 3 HOH 13 413 13 HOH HOH A . C 3 HOH 14 414 14 HOH HOH A . C 3 HOH 15 415 15 HOH HOH A . C 3 HOH 16 416 16 HOH HOH A . C 3 HOH 17 417 17 HOH HOH A . C 3 HOH 18 418 18 HOH HOH A . C 3 HOH 19 419 19 HOH HOH A . C 3 HOH 20 420 20 HOH HOH A . C 3 HOH 21 421 21 HOH HOH A . C 3 HOH 22 422 22 HOH HOH A . C 3 HOH 23 423 23 HOH HOH A . C 3 HOH 24 424 24 HOH HOH A . C 3 HOH 25 425 25 HOH HOH A . C 3 HOH 26 426 26 HOH HOH A . C 3 HOH 27 427 27 HOH HOH A . C 3 HOH 28 428 28 HOH HOH A . C 3 HOH 29 429 29 HOH HOH A . C 3 HOH 30 430 30 HOH HOH A . C 3 HOH 31 431 31 HOH HOH A . C 3 HOH 32 432 32 HOH HOH A . C 3 HOH 33 433 33 HOH HOH A . C 3 HOH 34 434 34 HOH HOH A . C 3 HOH 35 435 35 HOH HOH A . C 3 HOH 36 436 36 HOH HOH A . C 3 HOH 37 437 37 HOH HOH A . C 3 HOH 38 438 38 HOH HOH A . C 3 HOH 39 439 39 HOH HOH A . C 3 HOH 40 440 40 HOH HOH A . C 3 HOH 41 441 41 HOH HOH A . C 3 HOH 42 442 42 HOH HOH A . C 3 HOH 43 443 43 HOH HOH A . C 3 HOH 44 444 44 HOH HOH A . C 3 HOH 45 445 45 HOH HOH A . C 3 HOH 46 446 46 HOH HOH A . C 3 HOH 47 447 47 HOH HOH A . C 3 HOH 48 448 48 HOH HOH A . C 3 HOH 49 449 49 HOH HOH A . C 3 HOH 50 450 50 HOH HOH A . C 3 HOH 51 451 51 HOH HOH A . C 3 HOH 52 452 52 HOH HOH A . C 3 HOH 53 453 53 HOH HOH A . C 3 HOH 54 454 54 HOH HOH A . C 3 HOH 55 455 55 HOH HOH A . C 3 HOH 56 456 56 HOH HOH A . C 3 HOH 57 457 57 HOH HOH A . C 3 HOH 58 458 58 HOH HOH A . C 3 HOH 59 459 59 HOH HOH A . C 3 HOH 60 460 60 HOH HOH A . C 3 HOH 61 461 61 HOH HOH A . C 3 HOH 62 462 62 HOH HOH A . C 3 HOH 63 463 63 HOH HOH A . C 3 HOH 64 464 64 HOH HOH A . C 3 HOH 65 465 65 HOH HOH A . C 3 HOH 66 466 66 HOH HOH A . C 3 HOH 67 467 67 HOH HOH A . C 3 HOH 68 468 68 HOH HOH A . C 3 HOH 69 469 69 HOH HOH A . C 3 HOH 70 470 70 HOH HOH A . C 3 HOH 71 471 71 HOH HOH A . C 3 HOH 72 472 72 HOH HOH A . C 3 HOH 73 473 73 HOH HOH A . C 3 HOH 74 474 74 HOH HOH A . C 3 HOH 75 475 75 HOH HOH A . C 3 HOH 76 476 77 HOH HOH A . C 3 HOH 77 477 78 HOH HOH A . C 3 HOH 78 478 79 HOH HOH A . C 3 HOH 79 479 80 HOH HOH A . C 3 HOH 80 480 81 HOH HOH A . C 3 HOH 81 481 82 HOH HOH A . C 3 HOH 82 482 83 HOH HOH A . C 3 HOH 83 483 84 HOH HOH A . C 3 HOH 84 484 85 HOH HOH A . C 3 HOH 85 485 86 HOH HOH A . C 3 HOH 86 486 87 HOH HOH A . C 3 HOH 87 487 88 HOH HOH A . C 3 HOH 88 488 89 HOH HOH A . C 3 HOH 89 489 90 HOH HOH A . C 3 HOH 90 490 91 HOH HOH A . C 3 HOH 91 491 92 HOH HOH A . C 3 HOH 92 492 93 HOH HOH A . C 3 HOH 93 493 94 HOH HOH A . C 3 HOH 94 494 95 HOH HOH A . C 3 HOH 95 495 96 HOH HOH A . C 3 HOH 96 496 97 HOH HOH A . C 3 HOH 97 497 98 HOH HOH A . C 3 HOH 98 498 99 HOH HOH A . C 3 HOH 99 499 100 HOH HOH A . C 3 HOH 100 500 101 HOH HOH A . C 3 HOH 101 501 102 HOH HOH A . C 3 HOH 102 502 103 HOH HOH A . C 3 HOH 103 503 104 HOH HOH A . C 3 HOH 104 504 105 HOH HOH A . C 3 HOH 105 505 107 HOH HOH A . C 3 HOH 106 506 108 HOH HOH A . C 3 HOH 107 507 109 HOH HOH A . C 3 HOH 108 508 110 HOH HOH A . C 3 HOH 109 509 111 HOH HOH A . C 3 HOH 110 510 112 HOH HOH A . C 3 HOH 111 511 113 HOH HOH A . C 3 HOH 112 512 114 HOH HOH A . C 3 HOH 113 513 115 HOH HOH A . C 3 HOH 114 514 116 HOH HOH A . C 3 HOH 115 515 118 HOH HOH A . C 3 HOH 116 516 120 HOH HOH A . C 3 HOH 117 517 121 HOH HOH A . C 3 HOH 118 518 122 HOH HOH A . C 3 HOH 119 519 123 HOH HOH A . C 3 HOH 120 520 124 HOH HOH A . C 3 HOH 121 521 125 HOH HOH A . C 3 HOH 122 522 126 HOH HOH A . C 3 HOH 123 523 127 HOH HOH A . C 3 HOH 124 524 128 HOH HOH A . C 3 HOH 125 525 129 HOH HOH A . C 3 HOH 126 526 130 HOH HOH A . C 3 HOH 127 527 131 HOH HOH A . C 3 HOH 128 528 132 HOH HOH A . C 3 HOH 129 529 133 HOH HOH A . C 3 HOH 130 530 134 HOH HOH A . C 3 HOH 131 531 135 HOH HOH A . C 3 HOH 132 532 136 HOH HOH A . C 3 HOH 133 533 137 HOH HOH A . C 3 HOH 134 534 138 HOH HOH A . C 3 HOH 135 535 139 HOH HOH A . C 3 HOH 136 536 140 HOH HOH A . C 3 HOH 137 537 141 HOH HOH A . C 3 HOH 138 538 142 HOH HOH A . C 3 HOH 139 539 143 HOH HOH A . C 3 HOH 140 540 144 HOH HOH A . C 3 HOH 141 541 145 HOH HOH A . C 3 HOH 142 542 146 HOH HOH A . C 3 HOH 143 543 147 HOH HOH A . C 3 HOH 144 544 148 HOH HOH A . C 3 HOH 145 545 149 HOH HOH A . C 3 HOH 146 546 150 HOH HOH A . C 3 HOH 147 547 151 HOH HOH A . C 3 HOH 148 548 152 HOH HOH A . C 3 HOH 149 549 153 HOH HOH A . C 3 HOH 150 550 154 HOH HOH A . C 3 HOH 151 551 155 HOH HOH A . C 3 HOH 152 552 156 HOH HOH A . C 3 HOH 153 553 157 HOH HOH A . C 3 HOH 154 554 158 HOH HOH A . C 3 HOH 155 555 159 HOH HOH A . C 3 HOH 156 556 161 HOH HOH A . C 3 HOH 157 557 162 HOH HOH A . C 3 HOH 158 558 163 HOH HOH A . C 3 HOH 159 559 164 HOH HOH A . C 3 HOH 160 560 165 HOH HOH A . C 3 HOH 161 561 166 HOH HOH A . C 3 HOH 162 562 167 HOH HOH A . C 3 HOH 163 563 168 HOH HOH A . C 3 HOH 164 564 169 HOH HOH A . C 3 HOH 165 565 170 HOH HOH A . C 3 HOH 166 566 171 HOH HOH A . C 3 HOH 167 567 172 HOH HOH A . C 3 HOH 168 568 173 HOH HOH A . C 3 HOH 169 569 174 HOH HOH A . C 3 HOH 170 570 175 HOH HOH A . C 3 HOH 171 571 176 HOH HOH A . C 3 HOH 172 572 177 HOH HOH A . C 3 HOH 173 573 178 HOH HOH A . C 3 HOH 174 574 180 HOH HOH A . C 3 HOH 175 575 181 HOH HOH A . C 3 HOH 176 576 182 HOH HOH A . C 3 HOH 177 577 183 HOH HOH A . C 3 HOH 178 578 184 HOH HOH A . C 3 HOH 179 579 185 HOH HOH A . C 3 HOH 180 580 186 HOH HOH A . C 3 HOH 181 581 187 HOH HOH A . C 3 HOH 182 582 188 HOH HOH A . C 3 HOH 183 583 189 HOH HOH A . C 3 HOH 184 584 190 HOH HOH A . C 3 HOH 185 585 192 HOH HOH A . C 3 HOH 186 586 193 HOH HOH A . C 3 HOH 187 587 194 HOH HOH A . C 3 HOH 188 588 195 HOH HOH A . C 3 HOH 189 589 196 HOH HOH A . C 3 HOH 190 590 197 HOH HOH A . C 3 HOH 191 591 198 HOH HOH A . C 3 HOH 192 592 199 HOH HOH A . C 3 HOH 193 593 200 HOH HOH A . C 3 HOH 194 594 201 HOH HOH A . C 3 HOH 195 595 202 HOH HOH A . C 3 HOH 196 596 203 HOH HOH A . C 3 HOH 197 597 204 HOH HOH A . C 3 HOH 198 598 205 HOH HOH A . C 3 HOH 199 599 206 HOH HOH A . C 3 HOH 200 600 207 HOH HOH A . C 3 HOH 201 601 208 HOH HOH A . C 3 HOH 202 602 209 HOH HOH A . C 3 HOH 203 603 210 HOH HOH A . C 3 HOH 204 604 211 HOH HOH A . C 3 HOH 205 605 212 HOH HOH A . C 3 HOH 206 606 213 HOH HOH A . C 3 HOH 207 607 214 HOH HOH A . C 3 HOH 208 608 215 HOH HOH A . C 3 HOH 209 609 217 HOH HOH A . C 3 HOH 210 610 219 HOH HOH A . C 3 HOH 211 611 221 HOH HOH A . C 3 HOH 212 612 222 HOH HOH A . C 3 HOH 213 613 223 HOH HOH A . C 3 HOH 214 614 224 HOH HOH A . C 3 HOH 215 615 225 HOH HOH A . C 3 HOH 216 616 226 HOH HOH A . C 3 HOH 217 617 228 HOH HOH A . C 3 HOH 218 618 229 HOH HOH A . C 3 HOH 219 619 230 HOH HOH A . C 3 HOH 220 620 231 HOH HOH A . C 3 HOH 221 621 232 HOH HOH A . C 3 HOH 222 622 233 HOH HOH A . C 3 HOH 223 623 234 HOH HOH A . C 3 HOH 224 624 235 HOH HOH A . C 3 HOH 225 625 236 HOH HOH A . C 3 HOH 226 626 237 HOH HOH A . C 3 HOH 227 627 238 HOH HOH A . C 3 HOH 228 628 239 HOH HOH A . C 3 HOH 229 629 240 HOH HOH A . C 3 HOH 230 630 241 HOH HOH A . C 3 HOH 231 631 242 HOH HOH A . C 3 HOH 232 632 243 HOH HOH A . C 3 HOH 233 633 244 HOH HOH A . C 3 HOH 234 634 245 HOH HOH A . C 3 HOH 235 635 246 HOH HOH A . C 3 HOH 236 636 247 HOH HOH A . C 3 HOH 237 637 248 HOH HOH A . C 3 HOH 238 638 249 HOH HOH A . C 3 HOH 239 639 250 HOH HOH A . C 3 HOH 240 640 251 HOH HOH A . C 3 HOH 241 641 252 HOH HOH A . C 3 HOH 242 642 253 HOH HOH A . C 3 HOH 243 643 254 HOH HOH A . C 3 HOH 244 644 255 HOH HOH A . C 3 HOH 245 645 256 HOH HOH A . C 3 HOH 246 646 257 HOH HOH A . C 3 HOH 247 647 258 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 61 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 61 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 599 ? C HOH . 2 1 A HOH 602 ? C HOH . 3 1 A HOH 623 ? C HOH . 4 1 A HOH 645 ? C HOH . 5 1 A HOH 646 ? C HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-01-23 2 'Structure model' 1 1 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' entity 3 2 'Structure model' pdbx_chem_comp_identifier 4 2 'Structure model' pdbx_entity_nonpoly 5 2 'Structure model' struct_conn 6 2 'Structure model' struct_ref_seq_dif 7 2 'Structure model' struct_site 8 2 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.name' 2 2 'Structure model' '_chem_comp.type' 3 2 'Structure model' '_entity.pdbx_description' 4 2 'Structure model' '_pdbx_entity_nonpoly.name' 5 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 2 'Structure model' '_struct_conn.pdbx_role' 7 2 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 48.7540 64.9727 31.5211 0.1473 0.2362 0.1534 -0.0523 -0.0173 0.0388 7.5499 2.3823 6.1738 -1.9417 4.2119 -1.8114 -0.0784 0.4824 0.2820 0.0725 -0.1205 -0.3967 -0.3896 1.0310 0.1681 'X-RAY DIFFRACTION' 2 ? refined 53.3419 54.3180 37.8851 0.1361 0.1775 0.1137 -0.0042 -0.0144 0.0238 5.4713 7.3440 5.7867 -0.8653 0.6907 0.4575 -0.0233 -0.1102 -0.1591 0.3286 -0.0435 0.0281 0.1113 0.4314 0.0638 'X-RAY DIFFRACTION' 3 ? refined 47.9051 58.4656 37.1132 0.1688 0.1149 0.1361 -0.0458 -0.0193 0.0311 5.7936 2.7987 6.4959 -0.3693 5.0566 -0.2008 0.2335 0.0358 -0.3225 -0.1408 0.0267 0.0514 0.2559 0.2016 -0.2551 'X-RAY DIFFRACTION' 4 ? refined 21.5943 69.2982 19.0947 0.1597 0.1089 0.1591 -0.0029 -0.0163 -0.0315 5.1885 0.3203 4.3620 -0.8446 2.4305 -0.8099 0.0372 0.1243 0.0893 0.0714 -0.0872 0.0390 -0.0859 -0.3672 0.0194 'X-RAY DIFFRACTION' 5 ? refined 20.5246 75.9852 23.6972 0.1181 0.1242 0.0916 -0.0018 0.0272 -0.0135 2.6877 3.9277 1.9271 -1.9539 0.7282 -0.6264 -0.0248 -0.1241 -0.0409 0.2080 -0.0131 0.1375 -0.1819 -0.1926 0.0614 'X-RAY DIFFRACTION' 6 ? refined 16.7166 67.5962 25.1133 0.1667 0.1743 0.1730 -0.0522 0.0448 0.0011 7.5341 3.0616 4.6085 -4.5095 2.6752 -2.9110 -0.1022 -0.4424 -0.7398 0.0201 0.3421 0.5991 0.3585 -0.4072 -0.1328 'X-RAY DIFFRACTION' 7 ? refined 23.4961 77.4720 16.4713 0.1631 0.1104 0.1169 0.0407 0.0055 0.0044 5.1489 2.6424 4.5480 -2.1577 2.2202 -1.7409 -0.0607 0.2093 0.2013 -0.0626 0.0121 0.0886 -0.4905 -0.3316 0.0522 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(chain A and resseq 1:20)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(chain A and resseq 21:59)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(chain A and resseq 60:86)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(chain A and resseq 87:107)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(chain A and resseq 108:143)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '(chain A and resseq 144:172)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? '(chain A and resseq 173:203)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8_1069)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 630 ? ? O A HOH 631 ? ? 1.63 2 1 OE2 A GLU 7 ? B O A HOH 604 ? ? 1.83 3 1 O A HOH 606 ? ? O A HOH 619 ? ? 1.92 4 1 O A HOH 549 ? ? O A HOH 631 ? ? 1.98 5 1 O A HOH 603 ? ? O A HOH 620 ? ? 1.99 6 1 NH1 A ARG 54 ? ? O A HOH 640 ? ? 2.01 7 1 O A HOH 634 ? ? O A HOH 635 ? ? 2.01 8 1 O A GLY 40 ? A O A HOH 644 ? ? 2.08 9 1 O A HOH 526 ? ? O A HOH 589 ? ? 2.10 10 1 O A HOH 580 ? ? O A HOH 608 ? ? 2.14 11 1 O A HOH 627 ? ? O A HOH 630 ? ? 2.16 12 1 O A HOH 625 ? ? O A HOH 626 ? ? 2.17 13 1 O A HOH 516 ? ? O A HOH 579 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 419 ? ? 1_555 O A HOH 632 ? ? 3_655 1.39 2 1 O A HOH 512 ? ? 1_555 O A HOH 628 ? ? 3_655 1.43 3 1 O A HOH 517 ? ? 1_555 O A HOH 624 ? ? 3_655 1.50 4 1 O A HOH 402 ? ? 1_555 O A HOH 633 ? ? 3_655 1.55 5 1 O A HOH 434 ? ? 1_555 O A HOH 627 ? ? 3_655 1.62 6 1 O A HOH 515 ? ? 1_555 O A HOH 631 ? ? 3_655 1.65 7 1 O A HOH 552 ? ? 1_555 O A HOH 629 ? ? 3_655 1.68 8 1 O A HOH 549 ? ? 1_555 O A HOH 630 ? ? 3_655 1.72 9 1 O A HOH 513 ? ? 1_555 O A HOH 625 ? ? 3_655 1.74 10 1 O A HOH 605 ? ? 1_555 O A HOH 626 ? ? 3_655 1.75 11 1 O A HOH 626 ? ? 1_555 O A HOH 632 ? ? 3_655 1.82 12 1 O A HOH 600 ? ? 1_555 O A HOH 622 ? ? 8_466 1.86 13 1 O A HOH 598 ? ? 1_555 O A HOH 598 ? ? 3_655 1.94 14 1 OD2 A ASP 51 ? ? 1_555 O A HOH 642 ? ? 4_566 2.17 15 1 O A HOH 552 ? ? 1_555 O A HOH 630 ? ? 3_655 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 41 ? A -119.97 57.60 2 1 SER A 44 ? A -135.19 -110.93 3 1 SER A 44 ? B -179.19 22.46 4 1 LEU A 45 ? B -145.96 -64.19 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 157 ? N ? A GLU 157 N 2 1 Y 1 A GLU 157 ? CB ? A GLU 157 CB 3 1 Y 1 A GLU 157 ? CG ? A GLU 157 CG 4 1 Y 1 A GLU 157 ? CD ? A GLU 157 CD 5 1 Y 1 A GLU 157 ? OE1 ? A GLU 157 OE1 6 1 Y 1 A GLU 157 ? OE2 ? A GLU 157 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 152 ? A GLU 152 2 1 Y 1 A PRO 153 ? A PRO 153 3 1 Y 1 A GLN 154 ? A GLN 154 4 1 Y 1 A GLY 155 ? A GLY 155 5 1 Y 1 A ASP 156 ? A ASP 156 6 1 Y 1 A HIS 204 ? A HIS 204 7 1 Y 1 A HIS 205 ? A HIS 205 8 1 Y 1 A HIS 206 ? A HIS 206 9 1 Y 1 A HIS 207 ? A HIS 207 10 1 Y 1 A HIS 208 ? A HIS 208 11 1 Y 1 A HIS 209 ? A HIS 209 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 water HOH #