data_4HHT # _entry.id 4HHT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4HHT pdb_00004hht 10.2210/pdb4hht/pdb NDB NA2069 ? ? RCSB RCSB075483 ? ? WWPDB D_1000075483 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-06 2 'Structure model' 1 1 2013-03-27 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.value' 19 4 'Structure model' '_struct_conn.pdbx_dist_value' 20 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 34 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 35 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 36 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4HHT _pdbx_database_status.recvd_initial_deposition_date 2012-10-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3O3F . unspecified PDB 3O3G . unspecified PDB 3O3H . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rychlik, M.P.' 1 'Nowotny, M.' 2 # _citation.id primary _citation.title 'RNase H2 roles in genome integrity revealed by unlinking its activities.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 41 _citation.page_first 3130 _citation.page_last 3143 _citation.year 2013 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23355612 _citation.pdbx_database_id_DOI 10.1093/nar/gkt027 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chon, H.' 1 ? primary 'Sparks, J.L.' 2 ? primary 'Rychlik, M.' 3 ? primary 'Nowotny, M.' 4 ? primary 'Burgers, P.M.' 5 ? primary 'Crouch, R.J.' 6 ? primary 'Cerritelli, S.M.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribonuclease HII' 26569.842 1 3.1.26.4 G21S ? ? 2 polymer syn ;DNA (5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3') ; 3702.428 1 ? ? ? '12-mer DNA' 3 polymer syn ;DNA/RNA (5'-D(*GP*AP*CP*AP*C)-R(P*C)-D(P*TP*GP*AP*TP*TP*C)-3') ; 3638.380 1 ? ? ? '12-mer DNA with single ribonucleotide' 4 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 5 water nat water 18.015 24 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNase HII' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GIDELYKKEFGIVAGVDEASRGCLAGPVVAAAVVLEKEIEGINDSKQLSPAKRERLLDEIMEKAAVGIGIASPEEIDLYN IFNATKLAMNRALENLSVKPSFVLVDGKGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHK GYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGARKSVVFRKERTNHNLPLF ; ;GIDELYKKEFGIVAGVDEASRGCLAGPVVAAAVVLEKEIEGINDSKQLSPAKRERLLDEIMEKAAVGIGIASPEEIDLYN IFNATKLAMNRALENLSVKPSFVLVDGKGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHK GYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGARKSVVFRKERTNHNLPLF ; A ? 2 polydeoxyribonucleotide no no '(DG)(DA)(DA)(DT)(DC)(DA)(DG)(DG)(DT)(DG)(DT)(DC)' GAATCAGGTGTC C ? 3 'polydeoxyribonucleotide/polyribonucleotide hybrid' no no '(DG)(DA)(DC)(DA)(DC)C(DT)(DG)(DA)(DT)(DT)(DC)' GACACCTGATTC D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CALCIUM ION' CA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ILE n 1 3 ASP n 1 4 GLU n 1 5 LEU n 1 6 TYR n 1 7 LYS n 1 8 LYS n 1 9 GLU n 1 10 PHE n 1 11 GLY n 1 12 ILE n 1 13 VAL n 1 14 ALA n 1 15 GLY n 1 16 VAL n 1 17 ASP n 1 18 GLU n 1 19 ALA n 1 20 SER n 1 21 ARG n 1 22 GLY n 1 23 CYS n 1 24 LEU n 1 25 ALA n 1 26 GLY n 1 27 PRO n 1 28 VAL n 1 29 VAL n 1 30 ALA n 1 31 ALA n 1 32 ALA n 1 33 VAL n 1 34 VAL n 1 35 LEU n 1 36 GLU n 1 37 LYS n 1 38 GLU n 1 39 ILE n 1 40 GLU n 1 41 GLY n 1 42 ILE n 1 43 ASN n 1 44 ASP n 1 45 SER n 1 46 LYS n 1 47 GLN n 1 48 LEU n 1 49 SER n 1 50 PRO n 1 51 ALA n 1 52 LYS n 1 53 ARG n 1 54 GLU n 1 55 ARG n 1 56 LEU n 1 57 LEU n 1 58 ASP n 1 59 GLU n 1 60 ILE n 1 61 MET n 1 62 GLU n 1 63 LYS n 1 64 ALA n 1 65 ALA n 1 66 VAL n 1 67 GLY n 1 68 ILE n 1 69 GLY n 1 70 ILE n 1 71 ALA n 1 72 SER n 1 73 PRO n 1 74 GLU n 1 75 GLU n 1 76 ILE n 1 77 ASP n 1 78 LEU n 1 79 TYR n 1 80 ASN n 1 81 ILE n 1 82 PHE n 1 83 ASN n 1 84 ALA n 1 85 THR n 1 86 LYS n 1 87 LEU n 1 88 ALA n 1 89 MET n 1 90 ASN n 1 91 ARG n 1 92 ALA n 1 93 LEU n 1 94 GLU n 1 95 ASN n 1 96 LEU n 1 97 SER n 1 98 VAL n 1 99 LYS n 1 100 PRO n 1 101 SER n 1 102 PHE n 1 103 VAL n 1 104 LEU n 1 105 VAL n 1 106 ASP n 1 107 GLY n 1 108 LYS n 1 109 GLY n 1 110 ILE n 1 111 GLU n 1 112 LEU n 1 113 SER n 1 114 VAL n 1 115 PRO n 1 116 GLY n 1 117 THR n 1 118 CYS n 1 119 LEU n 1 120 VAL n 1 121 LYS n 1 122 GLY n 1 123 ASP n 1 124 GLN n 1 125 LYS n 1 126 SER n 1 127 LYS n 1 128 LEU n 1 129 ILE n 1 130 GLY n 1 131 ALA n 1 132 ALA n 1 133 SER n 1 134 ILE n 1 135 VAL n 1 136 ALA n 1 137 LYS n 1 138 VAL n 1 139 PHE n 1 140 ARG n 1 141 ASP n 1 142 ARG n 1 143 LEU n 1 144 MET n 1 145 SER n 1 146 GLU n 1 147 PHE n 1 148 HIS n 1 149 ARG n 1 150 MET n 1 151 TYR n 1 152 PRO n 1 153 GLN n 1 154 PHE n 1 155 SER n 1 156 PHE n 1 157 HIS n 1 158 LYS n 1 159 HIS n 1 160 LYS n 1 161 GLY n 1 162 TYR n 1 163 ALA n 1 164 THR n 1 165 LYS n 1 166 GLU n 1 167 HIS n 1 168 LEU n 1 169 ASN n 1 170 GLU n 1 171 ILE n 1 172 ARG n 1 173 LYS n 1 174 ASN n 1 175 GLY n 1 176 VAL n 1 177 LEU n 1 178 PRO n 1 179 ILE n 1 180 HIS n 1 181 ARG n 1 182 LEU n 1 183 SER n 1 184 PHE n 1 185 GLU n 1 186 PRO n 1 187 VAL n 1 188 LEU n 1 189 GLU n 1 190 LEU n 1 191 LEU n 1 192 THR n 1 193 ASP n 1 194 ASP n 1 195 LEU n 1 196 LEU n 1 197 ARG n 1 198 GLU n 1 199 PHE n 1 200 PHE n 1 201 GLU n 1 202 LYS n 1 203 GLY n 1 204 LEU n 1 205 ILE n 1 206 SER n 1 207 GLU n 1 208 ASN n 1 209 ARG n 1 210 PHE n 1 211 GLU n 1 212 ARG n 1 213 ILE n 1 214 LEU n 1 215 ASN n 1 216 LEU n 1 217 LEU n 1 218 GLY n 1 219 ALA n 1 220 ARG n 1 221 LYS n 1 222 SER n 1 223 VAL n 1 224 VAL n 1 225 PHE n 1 226 ARG n 1 227 LYS n 1 228 GLU n 1 229 ARG n 1 230 THR n 1 231 ASN n 1 232 HIS n 1 233 ASN n 1 234 LEU n 1 235 PRO n 1 236 LEU n 1 237 PHE n 2 1 DG n 2 2 DA n 2 3 DA n 2 4 DT n 2 5 DC n 2 6 DA n 2 7 DG n 2 8 DG n 2 9 DT n 2 10 DG n 2 11 DT n 2 12 DC n 3 1 DG n 3 2 DA n 3 3 DC n 3 4 DA n 3 5 DC n 3 6 C n 3 7 DT n 3 8 DG n 3 9 DA n 3 10 DT n 3 11 DT n 3 12 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rnhB, TM_0915' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 43589 / MSB8 / DSM 3109 / JCM 10099' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 243274 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 2 2 GLY GLY A . n A 1 2 ILE 2 3 3 ILE ILE A . n A 1 3 ASP 3 4 4 ASP ASP A . n A 1 4 GLU 4 5 5 GLU GLU A . n A 1 5 LEU 5 6 6 LEU LEU A . n A 1 6 TYR 6 7 7 TYR TYR A . n A 1 7 LYS 7 8 8 LYS LYS A . n A 1 8 LYS 8 9 9 LYS LYS A . n A 1 9 GLU 9 10 10 GLU GLU A . n A 1 10 PHE 10 11 11 PHE PHE A . n A 1 11 GLY 11 12 12 GLY GLY A . n A 1 12 ILE 12 13 13 ILE ILE A . n A 1 13 VAL 13 14 14 VAL VAL A . n A 1 14 ALA 14 15 15 ALA ALA A . n A 1 15 GLY 15 16 16 GLY GLY A . n A 1 16 VAL 16 17 17 VAL VAL A . n A 1 17 ASP 17 18 18 ASP ASP A . n A 1 18 GLU 18 19 19 GLU GLU A . n A 1 19 ALA 19 20 20 ALA ALA A . n A 1 20 SER 20 21 21 SER SER A . n A 1 21 ARG 21 22 22 ARG ARG A . n A 1 22 GLY 22 23 23 GLY GLY A . n A 1 23 CYS 23 24 24 CYS CYS A . n A 1 24 LEU 24 25 25 LEU LEU A . n A 1 25 ALA 25 26 26 ALA ALA A . n A 1 26 GLY 26 27 27 GLY GLY A . n A 1 27 PRO 27 28 28 PRO PRO A . n A 1 28 VAL 28 29 29 VAL VAL A . n A 1 29 VAL 29 30 30 VAL VAL A . n A 1 30 ALA 30 31 31 ALA ALA A . n A 1 31 ALA 31 32 32 ALA ALA A . n A 1 32 ALA 32 33 33 ALA ALA A . n A 1 33 VAL 33 34 34 VAL VAL A . n A 1 34 VAL 34 35 35 VAL VAL A . n A 1 35 LEU 35 36 36 LEU LEU A . n A 1 36 GLU 36 37 37 GLU GLU A . n A 1 37 LYS 37 38 38 LYS LYS A . n A 1 38 GLU 38 39 39 GLU GLU A . n A 1 39 ILE 39 40 40 ILE ILE A . n A 1 40 GLU 40 41 41 GLU GLU A . n A 1 41 GLY 41 42 42 GLY GLY A . n A 1 42 ILE 42 43 43 ILE ILE A . n A 1 43 ASN 43 44 44 ASN ASN A . n A 1 44 ASP 44 45 45 ASP ASP A . n A 1 45 SER 45 46 46 SER SER A . n A 1 46 LYS 46 47 ? ? ? A . n A 1 47 GLN 47 48 ? ? ? A . n A 1 48 LEU 48 49 ? ? ? A . n A 1 49 SER 49 50 ? ? ? A . n A 1 50 PRO 50 51 ? ? ? A . n A 1 51 ALA 51 52 ? ? ? A . n A 1 52 LYS 52 53 ? ? ? A . n A 1 53 ARG 53 54 ? ? ? A . n A 1 54 GLU 54 55 ? ? ? A . n A 1 55 ARG 55 56 56 ARG ARG A . n A 1 56 LEU 56 57 57 LEU LEU A . n A 1 57 LEU 57 58 58 LEU LEU A . n A 1 58 ASP 58 59 59 ASP ASP A . n A 1 59 GLU 59 60 60 GLU GLU A . n A 1 60 ILE 60 61 61 ILE ILE A . n A 1 61 MET 61 62 62 MET MET A . n A 1 62 GLU 62 63 63 GLU GLU A . n A 1 63 LYS 63 64 64 LYS LYS A . n A 1 64 ALA 64 65 65 ALA ALA A . n A 1 65 ALA 65 66 66 ALA ALA A . n A 1 66 VAL 66 67 67 VAL VAL A . n A 1 67 GLY 67 68 68 GLY GLY A . n A 1 68 ILE 68 69 69 ILE ILE A . n A 1 69 GLY 69 70 70 GLY GLY A . n A 1 70 ILE 70 71 71 ILE ILE A . n A 1 71 ALA 71 72 72 ALA ALA A . n A 1 72 SER 72 73 73 SER SER A . n A 1 73 PRO 73 74 74 PRO PRO A . n A 1 74 GLU 74 75 75 GLU GLU A . n A 1 75 GLU 75 76 76 GLU GLU A . n A 1 76 ILE 76 77 77 ILE ILE A . n A 1 77 ASP 77 78 78 ASP ASP A . n A 1 78 LEU 78 79 79 LEU LEU A . n A 1 79 TYR 79 80 80 TYR TYR A . n A 1 80 ASN 80 81 81 ASN ASN A . n A 1 81 ILE 81 82 82 ILE ILE A . n A 1 82 PHE 82 83 83 PHE PHE A . n A 1 83 ASN 83 84 84 ASN ASN A . n A 1 84 ALA 84 85 85 ALA ALA A . n A 1 85 THR 85 86 86 THR THR A . n A 1 86 LYS 86 87 87 LYS LYS A . n A 1 87 LEU 87 88 88 LEU LEU A . n A 1 88 ALA 88 89 89 ALA ALA A . n A 1 89 MET 89 90 90 MET MET A . n A 1 90 ASN 90 91 91 ASN ASN A . n A 1 91 ARG 91 92 92 ARG ARG A . n A 1 92 ALA 92 93 93 ALA ALA A . n A 1 93 LEU 93 94 94 LEU LEU A . n A 1 94 GLU 94 95 95 GLU GLU A . n A 1 95 ASN 95 96 96 ASN ASN A . n A 1 96 LEU 96 97 97 LEU LEU A . n A 1 97 SER 97 98 98 SER SER A . n A 1 98 VAL 98 99 99 VAL VAL A . n A 1 99 LYS 99 100 100 LYS LYS A . n A 1 100 PRO 100 101 101 PRO PRO A . n A 1 101 SER 101 102 102 SER SER A . n A 1 102 PHE 102 103 103 PHE PHE A . n A 1 103 VAL 103 104 104 VAL VAL A . n A 1 104 LEU 104 105 105 LEU LEU A . n A 1 105 VAL 105 106 106 VAL VAL A . n A 1 106 ASP 106 107 107 ASP ASP A . n A 1 107 GLY 107 108 108 GLY GLY A . n A 1 108 LYS 108 109 109 LYS LYS A . n A 1 109 GLY 109 110 110 GLY GLY A . n A 1 110 ILE 110 111 111 ILE ILE A . n A 1 111 GLU 111 112 112 GLU GLU A . n A 1 112 LEU 112 113 113 LEU LEU A . n A 1 113 SER 113 114 114 SER SER A . n A 1 114 VAL 114 115 115 VAL VAL A . n A 1 115 PRO 115 116 116 PRO PRO A . n A 1 116 GLY 116 117 117 GLY GLY A . n A 1 117 THR 117 118 118 THR THR A . n A 1 118 CYS 118 119 119 CYS CYS A . n A 1 119 LEU 119 120 120 LEU LEU A . n A 1 120 VAL 120 121 121 VAL VAL A . n A 1 121 LYS 121 122 122 LYS LYS A . n A 1 122 GLY 122 123 123 GLY GLY A . n A 1 123 ASP 123 124 124 ASP ASP A . n A 1 124 GLN 124 125 125 GLN GLN A . n A 1 125 LYS 125 126 126 LYS LYS A . n A 1 126 SER 126 127 127 SER SER A . n A 1 127 LYS 127 128 128 LYS LYS A . n A 1 128 LEU 128 129 129 LEU LEU A . n A 1 129 ILE 129 130 130 ILE ILE A . n A 1 130 GLY 130 131 131 GLY GLY A . n A 1 131 ALA 131 132 132 ALA ALA A . n A 1 132 ALA 132 133 133 ALA ALA A . n A 1 133 SER 133 134 134 SER SER A . n A 1 134 ILE 134 135 135 ILE ILE A . n A 1 135 VAL 135 136 136 VAL VAL A . n A 1 136 ALA 136 137 137 ALA ALA A . n A 1 137 LYS 137 138 138 LYS LYS A . n A 1 138 VAL 138 139 139 VAL VAL A . n A 1 139 PHE 139 140 140 PHE PHE A . n A 1 140 ARG 140 141 141 ARG ARG A . n A 1 141 ASP 141 142 142 ASP ASP A . n A 1 142 ARG 142 143 143 ARG ARG A . n A 1 143 LEU 143 144 144 LEU LEU A . n A 1 144 MET 144 145 145 MET MET A . n A 1 145 SER 145 146 146 SER SER A . n A 1 146 GLU 146 147 147 GLU GLU A . n A 1 147 PHE 147 148 148 PHE PHE A . n A 1 148 HIS 148 149 149 HIS HIS A . n A 1 149 ARG 149 150 150 ARG ARG A . n A 1 150 MET 150 151 151 MET MET A . n A 1 151 TYR 151 152 152 TYR TYR A . n A 1 152 PRO 152 153 153 PRO PRO A . n A 1 153 GLN 153 154 154 GLN GLN A . n A 1 154 PHE 154 155 155 PHE PHE A . n A 1 155 SER 155 156 156 SER SER A . n A 1 156 PHE 156 157 157 PHE PHE A . n A 1 157 HIS 157 158 158 HIS HIS A . n A 1 158 LYS 158 159 159 LYS LYS A . n A 1 159 HIS 159 160 160 HIS HIS A . n A 1 160 LYS 160 161 161 LYS LYS A . n A 1 161 GLY 161 162 162 GLY GLY A . n A 1 162 TYR 162 163 163 TYR TYR A . n A 1 163 ALA 163 164 164 ALA ALA A . n A 1 164 THR 164 165 165 THR THR A . n A 1 165 LYS 165 166 166 LYS LYS A . n A 1 166 GLU 166 167 167 GLU GLU A . n A 1 167 HIS 167 168 168 HIS HIS A . n A 1 168 LEU 168 169 169 LEU LEU A . n A 1 169 ASN 169 170 170 ASN ASN A . n A 1 170 GLU 170 171 171 GLU GLU A . n A 1 171 ILE 171 172 172 ILE ILE A . n A 1 172 ARG 172 173 173 ARG ARG A . n A 1 173 LYS 173 174 174 LYS LYS A . n A 1 174 ASN 174 175 175 ASN ASN A . n A 1 175 GLY 175 176 176 GLY GLY A . n A 1 176 VAL 176 177 177 VAL VAL A . n A 1 177 LEU 177 178 178 LEU LEU A . n A 1 178 PRO 178 179 179 PRO PRO A . n A 1 179 ILE 179 180 180 ILE ILE A . n A 1 180 HIS 180 181 181 HIS HIS A . n A 1 181 ARG 181 182 182 ARG ARG A . n A 1 182 LEU 182 183 183 LEU LEU A . n A 1 183 SER 183 184 184 SER SER A . n A 1 184 PHE 184 185 185 PHE PHE A . n A 1 185 GLU 185 186 186 GLU GLU A . n A 1 186 PRO 186 187 187 PRO PRO A . n A 1 187 VAL 187 188 188 VAL VAL A . n A 1 188 LEU 188 189 189 LEU LEU A . n A 1 189 GLU 189 190 190 GLU GLU A . n A 1 190 LEU 190 191 191 LEU LEU A . n A 1 191 LEU 191 192 192 LEU LEU A . n A 1 192 THR 192 193 193 THR THR A . n A 1 193 ASP 193 194 194 ASP ASP A . n A 1 194 ASP 194 195 195 ASP ASP A . n A 1 195 LEU 195 196 196 LEU LEU A . n A 1 196 LEU 196 197 197 LEU LEU A . n A 1 197 ARG 197 198 198 ARG ARG A . n A 1 198 GLU 198 199 199 GLU GLU A . n A 1 199 PHE 199 200 200 PHE PHE A . n A 1 200 PHE 200 201 201 PHE PHE A . n A 1 201 GLU 201 202 202 GLU GLU A . n A 1 202 LYS 202 203 203 LYS LYS A . n A 1 203 GLY 203 204 204 GLY GLY A . n A 1 204 LEU 204 205 205 LEU LEU A . n A 1 205 ILE 205 206 206 ILE ILE A . n A 1 206 SER 206 207 207 SER SER A . n A 1 207 GLU 207 208 208 GLU GLU A . n A 1 208 ASN 208 209 209 ASN ASN A . n A 1 209 ARG 209 210 210 ARG ARG A . n A 1 210 PHE 210 211 211 PHE PHE A . n A 1 211 GLU 211 212 212 GLU GLU A . n A 1 212 ARG 212 213 213 ARG ARG A . n A 1 213 ILE 213 214 214 ILE ILE A . n A 1 214 LEU 214 215 215 LEU LEU A . n A 1 215 ASN 215 216 216 ASN ASN A . n A 1 216 LEU 216 217 217 LEU LEU A . n A 1 217 LEU 217 218 218 LEU LEU A . n A 1 218 GLY 218 219 219 GLY GLY A . n A 1 219 ALA 219 220 220 ALA ALA A . n A 1 220 ARG 220 221 221 ARG ARG A . n A 1 221 LYS 221 222 222 LYS LYS A . n A 1 222 SER 222 223 223 SER SER A . n A 1 223 VAL 223 224 224 VAL VAL A . n A 1 224 VAL 224 225 225 VAL VAL A . n A 1 225 PHE 225 226 226 PHE PHE A . n A 1 226 ARG 226 227 227 ARG ARG A . n A 1 227 LYS 227 228 228 LYS LYS A . n A 1 228 GLU 228 229 229 GLU GLU A . n A 1 229 ARG 229 230 230 ARG ARG A . n A 1 230 THR 230 231 ? ? ? A . n A 1 231 ASN 231 232 ? ? ? A . n A 1 232 HIS 232 233 ? ? ? A . n A 1 233 ASN 233 234 ? ? ? A . n A 1 234 LEU 234 235 ? ? ? A . n A 1 235 PRO 235 236 ? ? ? A . n A 1 236 LEU 236 237 ? ? ? A . n A 1 237 PHE 237 238 ? ? ? A . n B 2 1 DG 1 1 1 DG GD C . n B 2 2 DA 2 2 2 DA AD C . n B 2 3 DA 3 3 3 DA AD C . n B 2 4 DT 4 4 4 DT TD C . n B 2 5 DC 5 5 5 DC CD C . n B 2 6 DA 6 6 6 DA AD C . n B 2 7 DG 7 7 7 DG GD C . n B 2 8 DG 8 8 8 DG GD C . n B 2 9 DT 9 9 9 DT TD C . n B 2 10 DG 10 10 10 DG GD C . n B 2 11 DT 11 11 11 DT TD C . n B 2 12 DC 12 12 12 DC CD C . n C 3 1 DG 1 1 1 DG GD D . n C 3 2 DA 2 2 2 DA AD D . n C 3 3 DC 3 3 3 DC CD D . n C 3 4 DA 4 4 4 DA AD D . n C 3 5 DC 5 5 5 DC CD D . n C 3 6 C 6 6 6 C CR D . n C 3 7 DT 7 7 7 DT TD D . n C 3 8 DG 8 8 8 DG GD D . n C 3 9 DA 9 9 9 DA AD D . n C 3 10 DT 10 10 10 DT TD D . n C 3 11 DT 11 11 11 DT TD D . n C 3 12 DC 12 12 12 DC CD D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA 1 301 1 CA CA A . E 4 CA 1 302 2 CA CA A . F 5 HOH 1 401 1 HOH HOH A . F 5 HOH 2 402 5 HOH HOH A . F 5 HOH 3 403 8 HOH HOH A . F 5 HOH 4 404 16 HOH HOH A . F 5 HOH 5 405 20 HOH HOH A . F 5 HOH 6 406 21 HOH HOH A . F 5 HOH 7 407 26 HOH HOH A . F 5 HOH 8 408 27 HOH HOH A . F 5 HOH 9 409 28 HOH HOH A . F 5 HOH 10 410 29 HOH HOH A . F 5 HOH 11 411 30 HOH HOH A . F 5 HOH 12 412 32 HOH HOH A . G 5 HOH 1 101 3 HOH HOH C . G 5 HOH 2 102 4 HOH HOH C . G 5 HOH 3 103 7 HOH HOH C . G 5 HOH 4 104 9 HOH HOH C . G 5 HOH 5 105 10 HOH HOH C . G 5 HOH 6 106 14 HOH HOH C . G 5 HOH 7 107 17 HOH HOH C . G 5 HOH 8 108 18 HOH HOH C . H 5 HOH 1 101 22 HOH HOH D . H 5 HOH 2 102 24 HOH HOH D . H 5 HOH 3 103 25 HOH HOH D . H 5 HOH 4 104 31 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 4 ? CG ? A ASP 3 CG 2 1 Y 1 A ASP 4 ? OD1 ? A ASP 3 OD1 3 1 Y 1 A ASP 4 ? OD2 ? A ASP 3 OD2 4 1 Y 1 A LYS 38 ? CE ? A LYS 37 CE 5 1 Y 1 A LYS 38 ? NZ ? A LYS 37 NZ 6 1 Y 1 A ASP 45 ? CG ? A ASP 44 CG 7 1 Y 1 A ASP 45 ? OD1 ? A ASP 44 OD1 8 1 Y 1 A ASP 45 ? OD2 ? A ASP 44 OD2 9 1 Y 1 A ARG 56 ? CG ? A ARG 55 CG 10 1 Y 1 A ARG 56 ? CD ? A ARG 55 CD 11 1 Y 1 A ARG 56 ? NE ? A ARG 55 NE 12 1 Y 1 A ARG 56 ? CZ ? A ARG 55 CZ 13 1 Y 1 A ARG 56 ? NH1 ? A ARG 55 NH1 14 1 Y 1 A ARG 56 ? NH2 ? A ARG 55 NH2 15 1 Y 1 A LYS 64 ? CG ? A LYS 63 CG 16 1 Y 1 A LYS 64 ? CD ? A LYS 63 CD 17 1 Y 1 A LYS 64 ? CE ? A LYS 63 CE 18 1 Y 1 A LYS 64 ? NZ ? A LYS 63 NZ 19 1 Y 1 A LYS 109 ? CE ? A LYS 108 CE 20 1 Y 1 A LYS 109 ? NZ ? A LYS 108 NZ 21 1 Y 1 A GLU 167 ? CG ? A GLU 166 CG 22 1 Y 1 A GLU 167 ? CD ? A GLU 166 CD 23 1 Y 1 A GLU 167 ? OE1 ? A GLU 166 OE1 24 1 Y 1 A GLU 167 ? OE2 ? A GLU 166 OE2 25 1 Y 1 A ARG 198 ? NE ? A ARG 197 NE 26 1 Y 1 A ARG 198 ? CZ ? A ARG 197 CZ 27 1 Y 1 A ARG 198 ? NH1 ? A ARG 197 NH1 28 1 Y 1 A ARG 198 ? NH2 ? A ARG 197 NH2 29 1 Y 1 A GLU 202 ? CG ? A GLU 201 CG 30 1 Y 1 A GLU 202 ? CD ? A GLU 201 CD 31 1 Y 1 A GLU 202 ? OE1 ? A GLU 201 OE1 32 1 Y 1 A GLU 202 ? OE2 ? A GLU 201 OE2 33 1 Y 1 A ARG 221 ? CG ? A ARG 220 CG 34 1 Y 1 A ARG 221 ? CD ? A ARG 220 CD 35 1 Y 1 A ARG 221 ? NE ? A ARG 220 NE 36 1 Y 1 A ARG 221 ? CZ ? A ARG 220 CZ 37 1 Y 1 A ARG 221 ? NH1 ? A ARG 220 NH1 38 1 Y 1 A ARG 221 ? NH2 ? A ARG 220 NH2 39 1 Y 1 A ARG 227 ? CG ? A ARG 226 CG 40 1 Y 1 A ARG 227 ? CD ? A ARG 226 CD 41 1 Y 1 A ARG 227 ? NE ? A ARG 226 NE 42 1 Y 1 A ARG 227 ? CZ ? A ARG 226 CZ 43 1 Y 1 A ARG 227 ? NH1 ? A ARG 226 NH1 44 1 Y 1 A ARG 227 ? NH2 ? A ARG 226 NH2 45 1 Y 1 A LYS 228 ? CG ? A LYS 227 CG 46 1 Y 1 A LYS 228 ? CD ? A LYS 227 CD 47 1 Y 1 A LYS 228 ? CE ? A LYS 227 CE 48 1 Y 1 A LYS 228 ? NZ ? A LYS 227 NZ 49 1 Y 1 A ARG 230 ? NE ? A ARG 229 NE 50 1 Y 1 A ARG 230 ? CZ ? A ARG 229 CZ 51 1 Y 1 A ARG 230 ? NH1 ? A ARG 229 NH1 52 1 Y 1 A ARG 230 ? NH2 ? A ARG 229 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MxCuBE 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8_1069)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 4HHT _cell.length_a 106.952 _cell.length_b 47.626 _cell.length_c 77.451 _cell.angle_alpha 90.00 _cell.angle_beta 131.26 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4HHT _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4HHT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_percent_sol 43.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '50 mM CaCl2, 0.1 M MES pH 6.0, 45% PEG200, VAPOR DIFFUSION, temperature 291K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-10-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91841 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4HHT _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 29.109 _reflns.d_resolution_high 3.1 _reflns.number_obs 5292 _reflns.number_all 5501 _reflns.percent_possible_obs 96.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4HHT _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 5022 _refine.ls_number_reflns_all 5501 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 26.015 _refine.ls_d_res_high 3.100 _refine.ls_percent_reflns_obs 91.98 _refine.ls_R_factor_obs 0.1818 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1781 _refine.ls_R_factor_R_free 0.2542 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.74 _refine.ls_number_reflns_R_free 238 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -0.5934 _refine.aniso_B[2][2] 6.3581 _refine.aniso_B[3][3] -5.7647 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 1.6334 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.305 _refine.solvent_model_param_bsol 28.322 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.40 _refine.pdbx_overall_phase_error 26.20 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1676 _refine_hist.pdbx_number_atoms_nucleic_acid 487 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 24 _refine_hist.number_atoms_total 2189 _refine_hist.d_res_high 3.100 _refine_hist.d_res_low 26.015 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 2247 'X-RAY DIFFRACTION' ? f_angle_d 1.255 ? ? 3131 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 20.822 ? ? 861 'X-RAY DIFFRACTION' ? f_chiral_restr 0.066 ? ? 362 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 318 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 3.1000 3.9036 2242 0.1907 87.00 0.2944 . . 116 . . . . 'X-RAY DIFFRACTION' . 3.9036 26.0158 2542 0.1708 97.00 0.2287 . . 122 . . . . # _database_PDB_matrix.entry_id 4HHT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4HHT _struct.title 'T. maritima RNase H2 G21S in complex with nucleic acid substrate and calcium ions' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4HHT _struct_keywords.pdbx_keywords Hydrolase/DNA _struct_keywords.text 'RNase H, nuclease, single ribonucleotide removal, HYDROLASE, Hydrolase-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RNH2_THEMA Q9X017 1 ;GIDELYKKEFGIVAGVDEAGRGCLAGPVVAAAVVLEKEIEGINDSKQLSPAKRERLLDEIMEKAAVGIGIASPEEIDLYN IFNATKLAMNRALENLSVKPSFVLVDGKGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHK GYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGARKSVVFRKERTNHNLPLF ; 2 ? 2 PDB 4HHT 4HHT 2 ? ? ? 3 PDB 4HHT 4HHT 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4HHT A 1 ? 237 ? Q9X017 2 ? 238 ? 2 238 2 2 4HHT C 1 ? 12 ? 4HHT 1 ? 12 ? 1 12 3 3 4HHT D 1 ? 12 ? 4HHT 1 ? 12 ? 1 12 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4HHT _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 20 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9X017 _struct_ref_seq_dif.db_mon_id GLY _struct_ref_seq_dif.pdbx_seq_db_seq_num 21 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 21 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3170 ? 1 MORE -47 ? 1 'SSA (A^2)' 13830 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 2 ? GLY A 11 ? ILE A 3 GLY A 12 1 ? 10 HELX_P HELX_P2 2 LEU A 56 ? LYS A 63 ? LEU A 57 LYS A 64 1 ? 8 HELX_P HELX_P3 3 SER A 72 ? ASN A 80 ? SER A 73 ASN A 81 1 ? 9 HELX_P HELX_P4 4 ASN A 80 ? LEU A 96 ? ASN A 81 LEU A 97 1 ? 17 HELX_P HELX_P5 5 LYS A 121 ? LYS A 125 ? LYS A 122 LYS A 126 5 ? 5 HELX_P HELX_P6 6 SER A 126 ? TYR A 151 ? SER A 127 TYR A 152 1 ? 26 HELX_P HELX_P7 7 SER A 155 ? LYS A 160 ? SER A 156 LYS A 161 1 ? 6 HELX_P HELX_P8 8 THR A 164 ? GLY A 175 ? THR A 165 GLY A 176 1 ? 12 HELX_P HELX_P9 9 PHE A 184 ? GLU A 189 ? PHE A 185 GLU A 190 1 ? 6 HELX_P HELX_P10 10 THR A 192 ? LYS A 202 ? THR A 193 LYS A 203 1 ? 11 HELX_P HELX_P11 11 SER A 206 ? GLU A 228 ? SER A 207 GLU A 229 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 17 OD2 ? ? ? 1_555 E CA . CA ? ? A ASP 18 A CA 302 1_555 ? ? ? ? ? ? ? 2.469 ? ? metalc2 metalc ? ? A GLU 18 O ? ? ? 1_555 E CA . CA ? ? A GLU 19 A CA 302 1_555 ? ? ? ? ? ? ? 2.693 ? ? metalc3 metalc ? ? A ASP 123 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 124 A CA 301 1_555 ? ? ? ? ? ? ? 2.883 ? ? metalc4 metalc ? ? D CA . CA ? ? ? 1_555 C C 6 OP2 ? ? A CA 301 D C 6 1_555 ? ? ? ? ? ? ? 2.584 ? ? metalc5 metalc ? ? D CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 301 D HOH 101 1_555 ? ? ? ? ? ? ? 3.171 ? ? metalc6 metalc ? ? D CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 301 D HOH 103 1_555 ? ? ? ? ? ? ? 3.109 ? ? metalc7 metalc ? ? D CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 301 D HOH 104 1_555 ? ? ? ? ? ? ? 2.578 ? ? metalc8 metalc ? ? E CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 302 A HOH 410 1_555 ? ? ? ? ? ? ? 2.743 ? ? metalc9 metalc ? ? E CA . CA ? ? ? 1_555 C C 6 OP1 ? ? A CA 302 D C 6 1_555 ? ? ? ? ? ? ? 2.420 ? ? metalc10 metalc ? ? E CA . CA ? ? ? 1_555 C DT 7 OP2 ? ? A CA 302 D DT 7 1_555 ? ? ? ? ? ? ? 2.483 ? ? metalc11 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 302 D HOH 102 1_555 ? ? ? ? ? ? ? 3.029 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 12 N3 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 12 O2 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 12 N4 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 11 N3 ? ? C DA 2 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 11 O4 ? ? C DA 2 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DA 3 N1 ? ? ? 1_555 C DT 10 N3 ? ? C DA 3 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 3 N6 ? ? ? 1_555 C DT 10 O4 ? ? C DA 3 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 9 N1 ? ? C DT 4 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 9 N6 ? ? C DT 4 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 8 N1 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 8 O6 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 8 N2 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 7 N3 ? ? C DA 6 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 7 O4 ? ? C DA 6 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C C 6 N3 ? ? C DG 7 D C 6 1_555 ? ? ? ? ? ? 'DG-C PAIR' ? ? ? hydrog16 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 5 N3 ? ? C DG 8 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 5 O2 ? ? C DG 8 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 5 N4 ? ? C DG 8 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 4 N1 ? ? C DT 9 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 4 N6 ? ? C DT 9 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 10 N1 ? ? ? 1_555 C DC 3 N3 ? ? C DG 10 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 10 N2 ? ? ? 1_555 C DC 3 O2 ? ? C DG 10 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 10 O6 ? ? ? 1_555 C DC 3 N4 ? ? C DG 10 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 2 N1 ? ? C DT 11 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 2 N6 ? ? C DT 11 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 12 N3 ? ? ? 1_555 C DG 1 N1 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 12 N4 ? ? ? 1_555 C DG 1 O6 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 12 O2 ? ? ? 1_555 C DG 1 N2 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 17 ? A ASP 18 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? A GLU 18 ? A GLU 19 ? 1_555 93.9 ? 2 OD2 ? A ASP 17 ? A ASP 18 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? F HOH . ? A HOH 410 ? 1_555 85.5 ? 3 O ? A GLU 18 ? A GLU 19 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? F HOH . ? A HOH 410 ? 1_555 84.4 ? 4 OD2 ? A ASP 17 ? A ASP 18 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 OP1 ? C C 6 ? D C 6 ? 1_555 92.8 ? 5 O ? A GLU 18 ? A GLU 19 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 OP1 ? C C 6 ? D C 6 ? 1_555 96.7 ? 6 O ? F HOH . ? A HOH 410 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 OP1 ? C C 6 ? D C 6 ? 1_555 178.0 ? 7 OD2 ? A ASP 17 ? A ASP 18 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 OP2 ? C DT 7 ? D DT 7 ? 1_555 160.9 ? 8 O ? A GLU 18 ? A GLU 19 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 OP2 ? C DT 7 ? D DT 7 ? 1_555 90.5 ? 9 O ? F HOH . ? A HOH 410 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 OP2 ? C DT 7 ? D DT 7 ? 1_555 76.4 ? 10 OP1 ? C C 6 ? D C 6 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 OP2 ? C DT 7 ? D DT 7 ? 1_555 105.1 ? 11 OD2 ? A ASP 17 ? A ASP 18 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? H HOH . ? D HOH 102 ? 1_555 104.7 ? 12 O ? A GLU 18 ? A GLU 19 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? H HOH . ? D HOH 102 ? 1_555 146.9 ? 13 O ? F HOH . ? A HOH 410 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? H HOH . ? D HOH 102 ? 1_555 70.2 ? 14 OP1 ? C C 6 ? D C 6 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? H HOH . ? D HOH 102 ? 1_555 109.3 ? 15 OP2 ? C DT 7 ? D DT 7 ? 1_555 CA ? E CA . ? A CA 302 ? 1_555 O ? H HOH . ? D HOH 102 ? 1_555 63.6 ? 16 OD2 ? A ASP 123 ? A ASP 124 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 OP2 ? C C 6 ? D C 6 ? 1_555 90.9 ? 17 OD2 ? A ASP 123 ? A ASP 124 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? H HOH . ? D HOH 101 ? 1_555 83.0 ? 18 OP2 ? C C 6 ? D C 6 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? H HOH . ? D HOH 101 ? 1_555 74.2 ? 19 OD2 ? A ASP 123 ? A ASP 124 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? H HOH . ? D HOH 103 ? 1_555 149.5 ? 20 OP2 ? C C 6 ? D C 6 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? H HOH . ? D HOH 103 ? 1_555 83.1 ? 21 O ? H HOH . ? D HOH 101 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? H HOH . ? D HOH 103 ? 1_555 66.7 ? 22 OD2 ? A ASP 123 ? A ASP 124 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? H HOH . ? D HOH 104 ? 1_555 91.0 ? 23 OP2 ? C C 6 ? D C 6 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? H HOH . ? D HOH 104 ? 1_555 86.3 ? 24 O ? H HOH . ? D HOH 101 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? H HOH . ? D HOH 104 ? 1_555 159.4 ? 25 O ? H HOH . ? D HOH 103 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? H HOH . ? D HOH 104 ? 1_555 118.3 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 64 ? ALA A 71 ? ALA A 65 ALA A 72 A 2 VAL A 28 ? LEU A 35 ? VAL A 29 LEU A 36 A 3 VAL A 13 ? ALA A 19 ? VAL A 14 ALA A 20 A 4 PHE A 102 ? ASP A 106 ? PHE A 103 ASP A 107 A 5 GLY A 116 ? LEU A 119 ? GLY A 117 LEU A 120 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 67 ? O GLY A 68 N ALA A 32 ? N ALA A 33 A 2 3 O VAL A 29 ? O VAL A 30 N ALA A 19 ? N ALA A 20 A 3 4 N ALA A 14 ? N ALA A 15 O LEU A 104 ? O LEU A 105 A 4 5 N VAL A 105 ? N VAL A 106 O LEU A 119 ? O LEU A 120 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 301 ? 4 'BINDING SITE FOR RESIDUE CA A 301' AC2 Software A CA 302 ? 6 'BINDING SITE FOR RESIDUE CA A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASP A 123 ? ASP A 124 . ? 1_555 ? 2 AC1 4 GLN A 124 ? GLN A 125 . ? 1_555 ? 3 AC1 4 C C 6 ? C D 6 . ? 1_555 ? 4 AC1 4 HOH H . ? HOH D 104 . ? 1_555 ? 5 AC2 6 ASP A 17 ? ASP A 18 . ? 1_555 ? 6 AC2 6 GLU A 18 ? GLU A 19 . ? 1_555 ? 7 AC2 6 HOH F . ? HOH A 410 . ? 1_555 ? 8 AC2 6 C C 6 ? C D 6 . ? 1_555 ? 9 AC2 6 DT C 7 ? DT D 7 . ? 1_555 ? 10 AC2 6 HOH H . ? HOH D 102 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 24 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 24 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.709 _pdbx_validate_rmsd_bond.bond_target_value 1.812 _pdbx_validate_rmsd_bond.bond_deviation -0.103 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DA 3 ? ? "C1'" C DA 3 ? ? N9 C DA 3 ? ? 111.39 108.30 3.09 0.30 N 2 1 "C3'" C DC 5 ? ? "C2'" C DC 5 ? ? "C1'" C DC 5 ? ? 97.14 102.40 -5.26 0.80 N 3 1 "C4'" C DG 7 ? ? "C3'" C DG 7 ? ? "C2'" C DG 7 ? ? 97.82 102.20 -4.38 0.70 N 4 1 "O4'" C DG 7 ? ? "C1'" C DG 7 ? ? N9 C DG 7 ? ? 111.82 108.30 3.52 0.30 N 5 1 "O4'" C DG 10 ? ? "C4'" C DG 10 ? ? "C3'" C DG 10 ? ? 101.77 104.50 -2.73 0.40 N 6 1 "C3'" D DG 1 ? ? "C2'" D DG 1 ? ? "C1'" D DG 1 ? ? 96.52 102.40 -5.88 0.80 N 7 1 "O4'" D DG 1 ? ? "C1'" D DG 1 ? ? N9 D DG 1 ? ? 110.43 108.30 2.13 0.30 N 8 1 "O4'" D DA 2 ? ? "C1'" D DA 2 ? ? N9 D DA 2 ? ? 111.35 108.30 3.05 0.30 N 9 1 "O4'" D DC 3 ? ? "C1'" D DC 3 ? ? N1 D DC 3 ? ? 111.04 108.30 2.74 0.30 N 10 1 "O4'" D DT 11 ? ? "C1'" D DT 11 ? ? N1 D DT 11 ? ? 110.46 108.30 2.16 0.30 N 11 1 "O4'" D DC 12 ? ? "C1'" D DC 12 ? ? N1 D DC 12 ? ? 110.99 108.30 2.69 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 21 ? ? 78.79 56.12 2 1 GLU A 37 ? ? -120.43 -76.37 3 1 LYS A 38 ? ? -50.07 105.61 4 1 ASP A 45 ? ? -147.29 -155.52 5 1 ASN A 81 ? ? 110.82 159.64 6 1 LYS A 126 ? ? -151.03 -16.50 7 1 SER A 156 ? ? -82.78 42.86 8 1 LYS A 159 ? ? -103.02 -61.01 9 1 ALA A 164 ? ? -91.46 42.24 10 1 GLU A 186 ? ? -27.20 -64.68 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 47 ? A LYS 46 2 1 Y 1 A GLN 48 ? A GLN 47 3 1 Y 1 A LEU 49 ? A LEU 48 4 1 Y 1 A SER 50 ? A SER 49 5 1 Y 1 A PRO 51 ? A PRO 50 6 1 Y 1 A ALA 52 ? A ALA 51 7 1 Y 1 A LYS 53 ? A LYS 52 8 1 Y 1 A ARG 54 ? A ARG 53 9 1 Y 1 A GLU 55 ? A GLU 54 10 1 Y 1 A THR 231 ? A THR 230 11 1 Y 1 A ASN 232 ? A ASN 231 12 1 Y 1 A HIS 233 ? A HIS 232 13 1 Y 1 A ASN 234 ? A ASN 233 14 1 Y 1 A LEU 235 ? A LEU 234 15 1 Y 1 A PRO 236 ? A PRO 235 16 1 Y 1 A LEU 237 ? A LEU 236 17 1 Y 1 A PHE 238 ? A PHE 237 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 C OP3 O N N 74 C P P N N 75 C OP1 O N N 76 C OP2 O N N 77 C "O5'" O N N 78 C "C5'" C N N 79 C "C4'" C N R 80 C "O4'" O N N 81 C "C3'" C N S 82 C "O3'" O N N 83 C "C2'" C N R 84 C "O2'" O N N 85 C "C1'" C N R 86 C N1 N N N 87 C C2 C N N 88 C O2 O N N 89 C N3 N N N 90 C C4 C N N 91 C N4 N N N 92 C C5 C N N 93 C C6 C N N 94 C HOP3 H N N 95 C HOP2 H N N 96 C "H5'" H N N 97 C "H5''" H N N 98 C "H4'" H N N 99 C "H3'" H N N 100 C "HO3'" H N N 101 C "H2'" H N N 102 C "HO2'" H N N 103 C "H1'" H N N 104 C H41 H N N 105 C H42 H N N 106 C H5 H N N 107 C H6 H N N 108 CA CA CA N N 109 CYS N N N N 110 CYS CA C N R 111 CYS C C N N 112 CYS O O N N 113 CYS CB C N N 114 CYS SG S N N 115 CYS OXT O N N 116 CYS H H N N 117 CYS H2 H N N 118 CYS HA H N N 119 CYS HB2 H N N 120 CYS HB3 H N N 121 CYS HG H N N 122 CYS HXT H N N 123 DA OP3 O N N 124 DA P P N N 125 DA OP1 O N N 126 DA OP2 O N N 127 DA "O5'" O N N 128 DA "C5'" C N N 129 DA "C4'" C N R 130 DA "O4'" O N N 131 DA "C3'" C N S 132 DA "O3'" O N N 133 DA "C2'" C N N 134 DA "C1'" C N R 135 DA N9 N Y N 136 DA C8 C Y N 137 DA N7 N Y N 138 DA C5 C Y N 139 DA C6 C Y N 140 DA N6 N N N 141 DA N1 N Y N 142 DA C2 C Y N 143 DA N3 N Y N 144 DA C4 C Y N 145 DA HOP3 H N N 146 DA HOP2 H N N 147 DA "H5'" H N N 148 DA "H5''" H N N 149 DA "H4'" H N N 150 DA "H3'" H N N 151 DA "HO3'" H N N 152 DA "H2'" H N N 153 DA "H2''" H N N 154 DA "H1'" H N N 155 DA H8 H N N 156 DA H61 H N N 157 DA H62 H N N 158 DA H2 H N N 159 DC OP3 O N N 160 DC P P N N 161 DC OP1 O N N 162 DC OP2 O N N 163 DC "O5'" O N N 164 DC "C5'" C N N 165 DC "C4'" C N R 166 DC "O4'" O N N 167 DC "C3'" C N S 168 DC "O3'" O N N 169 DC "C2'" C N N 170 DC "C1'" C N R 171 DC N1 N N N 172 DC C2 C N N 173 DC O2 O N N 174 DC N3 N N N 175 DC C4 C N N 176 DC N4 N N N 177 DC C5 C N N 178 DC C6 C N N 179 DC HOP3 H N N 180 DC HOP2 H N N 181 DC "H5'" H N N 182 DC "H5''" H N N 183 DC "H4'" H N N 184 DC "H3'" H N N 185 DC "HO3'" H N N 186 DC "H2'" H N N 187 DC "H2''" H N N 188 DC "H1'" H N N 189 DC H41 H N N 190 DC H42 H N N 191 DC H5 H N N 192 DC H6 H N N 193 DG OP3 O N N 194 DG P P N N 195 DG OP1 O N N 196 DG OP2 O N N 197 DG "O5'" O N N 198 DG "C5'" C N N 199 DG "C4'" C N R 200 DG "O4'" O N N 201 DG "C3'" C N S 202 DG "O3'" O N N 203 DG "C2'" C N N 204 DG "C1'" C N R 205 DG N9 N Y N 206 DG C8 C Y N 207 DG N7 N Y N 208 DG C5 C Y N 209 DG C6 C N N 210 DG O6 O N N 211 DG N1 N N N 212 DG C2 C N N 213 DG N2 N N N 214 DG N3 N N N 215 DG C4 C Y N 216 DG HOP3 H N N 217 DG HOP2 H N N 218 DG "H5'" H N N 219 DG "H5''" H N N 220 DG "H4'" H N N 221 DG "H3'" H N N 222 DG "HO3'" H N N 223 DG "H2'" H N N 224 DG "H2''" H N N 225 DG "H1'" H N N 226 DG H8 H N N 227 DG H1 H N N 228 DG H21 H N N 229 DG H22 H N N 230 DT OP3 O N N 231 DT P P N N 232 DT OP1 O N N 233 DT OP2 O N N 234 DT "O5'" O N N 235 DT "C5'" C N N 236 DT "C4'" C N R 237 DT "O4'" O N N 238 DT "C3'" C N S 239 DT "O3'" O N N 240 DT "C2'" C N N 241 DT "C1'" C N R 242 DT N1 N N N 243 DT C2 C N N 244 DT O2 O N N 245 DT N3 N N N 246 DT C4 C N N 247 DT O4 O N N 248 DT C5 C N N 249 DT C7 C N N 250 DT C6 C N N 251 DT HOP3 H N N 252 DT HOP2 H N N 253 DT "H5'" H N N 254 DT "H5''" H N N 255 DT "H4'" H N N 256 DT "H3'" H N N 257 DT "HO3'" H N N 258 DT "H2'" H N N 259 DT "H2''" H N N 260 DT "H1'" H N N 261 DT H3 H N N 262 DT H71 H N N 263 DT H72 H N N 264 DT H73 H N N 265 DT H6 H N N 266 GLN N N N N 267 GLN CA C N S 268 GLN C C N N 269 GLN O O N N 270 GLN CB C N N 271 GLN CG C N N 272 GLN CD C N N 273 GLN OE1 O N N 274 GLN NE2 N N N 275 GLN OXT O N N 276 GLN H H N N 277 GLN H2 H N N 278 GLN HA H N N 279 GLN HB2 H N N 280 GLN HB3 H N N 281 GLN HG2 H N N 282 GLN HG3 H N N 283 GLN HE21 H N N 284 GLN HE22 H N N 285 GLN HXT H N N 286 GLU N N N N 287 GLU CA C N S 288 GLU C C N N 289 GLU O O N N 290 GLU CB C N N 291 GLU CG C N N 292 GLU CD C N N 293 GLU OE1 O N N 294 GLU OE2 O N N 295 GLU OXT O N N 296 GLU H H N N 297 GLU H2 H N N 298 GLU HA H N N 299 GLU HB2 H N N 300 GLU HB3 H N N 301 GLU HG2 H N N 302 GLU HG3 H N N 303 GLU HE2 H N N 304 GLU HXT H N N 305 GLY N N N N 306 GLY CA C N N 307 GLY C C N N 308 GLY O O N N 309 GLY OXT O N N 310 GLY H H N N 311 GLY H2 H N N 312 GLY HA2 H N N 313 GLY HA3 H N N 314 GLY HXT H N N 315 HIS N N N N 316 HIS CA C N S 317 HIS C C N N 318 HIS O O N N 319 HIS CB C N N 320 HIS CG C Y N 321 HIS ND1 N Y N 322 HIS CD2 C Y N 323 HIS CE1 C Y N 324 HIS NE2 N Y N 325 HIS OXT O N N 326 HIS H H N N 327 HIS H2 H N N 328 HIS HA H N N 329 HIS HB2 H N N 330 HIS HB3 H N N 331 HIS HD1 H N N 332 HIS HD2 H N N 333 HIS HE1 H N N 334 HIS HE2 H N N 335 HIS HXT H N N 336 HOH O O N N 337 HOH H1 H N N 338 HOH H2 H N N 339 ILE N N N N 340 ILE CA C N S 341 ILE C C N N 342 ILE O O N N 343 ILE CB C N S 344 ILE CG1 C N N 345 ILE CG2 C N N 346 ILE CD1 C N N 347 ILE OXT O N N 348 ILE H H N N 349 ILE H2 H N N 350 ILE HA H N N 351 ILE HB H N N 352 ILE HG12 H N N 353 ILE HG13 H N N 354 ILE HG21 H N N 355 ILE HG22 H N N 356 ILE HG23 H N N 357 ILE HD11 H N N 358 ILE HD12 H N N 359 ILE HD13 H N N 360 ILE HXT H N N 361 LEU N N N N 362 LEU CA C N S 363 LEU C C N N 364 LEU O O N N 365 LEU CB C N N 366 LEU CG C N N 367 LEU CD1 C N N 368 LEU CD2 C N N 369 LEU OXT O N N 370 LEU H H N N 371 LEU H2 H N N 372 LEU HA H N N 373 LEU HB2 H N N 374 LEU HB3 H N N 375 LEU HG H N N 376 LEU HD11 H N N 377 LEU HD12 H N N 378 LEU HD13 H N N 379 LEU HD21 H N N 380 LEU HD22 H N N 381 LEU HD23 H N N 382 LEU HXT H N N 383 LYS N N N N 384 LYS CA C N S 385 LYS C C N N 386 LYS O O N N 387 LYS CB C N N 388 LYS CG C N N 389 LYS CD C N N 390 LYS CE C N N 391 LYS NZ N N N 392 LYS OXT O N N 393 LYS H H N N 394 LYS H2 H N N 395 LYS HA H N N 396 LYS HB2 H N N 397 LYS HB3 H N N 398 LYS HG2 H N N 399 LYS HG3 H N N 400 LYS HD2 H N N 401 LYS HD3 H N N 402 LYS HE2 H N N 403 LYS HE3 H N N 404 LYS HZ1 H N N 405 LYS HZ2 H N N 406 LYS HZ3 H N N 407 LYS HXT H N N 408 MET N N N N 409 MET CA C N S 410 MET C C N N 411 MET O O N N 412 MET CB C N N 413 MET CG C N N 414 MET SD S N N 415 MET CE C N N 416 MET OXT O N N 417 MET H H N N 418 MET H2 H N N 419 MET HA H N N 420 MET HB2 H N N 421 MET HB3 H N N 422 MET HG2 H N N 423 MET HG3 H N N 424 MET HE1 H N N 425 MET HE2 H N N 426 MET HE3 H N N 427 MET HXT H N N 428 PHE N N N N 429 PHE CA C N S 430 PHE C C N N 431 PHE O O N N 432 PHE CB C N N 433 PHE CG C Y N 434 PHE CD1 C Y N 435 PHE CD2 C Y N 436 PHE CE1 C Y N 437 PHE CE2 C Y N 438 PHE CZ C Y N 439 PHE OXT O N N 440 PHE H H N N 441 PHE H2 H N N 442 PHE HA H N N 443 PHE HB2 H N N 444 PHE HB3 H N N 445 PHE HD1 H N N 446 PHE HD2 H N N 447 PHE HE1 H N N 448 PHE HE2 H N N 449 PHE HZ H N N 450 PHE HXT H N N 451 PRO N N N N 452 PRO CA C N S 453 PRO C C N N 454 PRO O O N N 455 PRO CB C N N 456 PRO CG C N N 457 PRO CD C N N 458 PRO OXT O N N 459 PRO H H N N 460 PRO HA H N N 461 PRO HB2 H N N 462 PRO HB3 H N N 463 PRO HG2 H N N 464 PRO HG3 H N N 465 PRO HD2 H N N 466 PRO HD3 H N N 467 PRO HXT H N N 468 SER N N N N 469 SER CA C N S 470 SER C C N N 471 SER O O N N 472 SER CB C N N 473 SER OG O N N 474 SER OXT O N N 475 SER H H N N 476 SER H2 H N N 477 SER HA H N N 478 SER HB2 H N N 479 SER HB3 H N N 480 SER HG H N N 481 SER HXT H N N 482 THR N N N N 483 THR CA C N S 484 THR C C N N 485 THR O O N N 486 THR CB C N R 487 THR OG1 O N N 488 THR CG2 C N N 489 THR OXT O N N 490 THR H H N N 491 THR H2 H N N 492 THR HA H N N 493 THR HB H N N 494 THR HG1 H N N 495 THR HG21 H N N 496 THR HG22 H N N 497 THR HG23 H N N 498 THR HXT H N N 499 TYR N N N N 500 TYR CA C N S 501 TYR C C N N 502 TYR O O N N 503 TYR CB C N N 504 TYR CG C Y N 505 TYR CD1 C Y N 506 TYR CD2 C Y N 507 TYR CE1 C Y N 508 TYR CE2 C Y N 509 TYR CZ C Y N 510 TYR OH O N N 511 TYR OXT O N N 512 TYR H H N N 513 TYR H2 H N N 514 TYR HA H N N 515 TYR HB2 H N N 516 TYR HB3 H N N 517 TYR HD1 H N N 518 TYR HD2 H N N 519 TYR HE1 H N N 520 TYR HE2 H N N 521 TYR HH H N N 522 TYR HXT H N N 523 VAL N N N N 524 VAL CA C N S 525 VAL C C N N 526 VAL O O N N 527 VAL CB C N N 528 VAL CG1 C N N 529 VAL CG2 C N N 530 VAL OXT O N N 531 VAL H H N N 532 VAL H2 H N N 533 VAL HA H N N 534 VAL HB H N N 535 VAL HG11 H N N 536 VAL HG12 H N N 537 VAL HG13 H N N 538 VAL HG21 H N N 539 VAL HG22 H N N 540 VAL HG23 H N N 541 VAL HXT H N N 542 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 C OP3 P sing N N 70 C OP3 HOP3 sing N N 71 C P OP1 doub N N 72 C P OP2 sing N N 73 C P "O5'" sing N N 74 C OP2 HOP2 sing N N 75 C "O5'" "C5'" sing N N 76 C "C5'" "C4'" sing N N 77 C "C5'" "H5'" sing N N 78 C "C5'" "H5''" sing N N 79 C "C4'" "O4'" sing N N 80 C "C4'" "C3'" sing N N 81 C "C4'" "H4'" sing N N 82 C "O4'" "C1'" sing N N 83 C "C3'" "O3'" sing N N 84 C "C3'" "C2'" sing N N 85 C "C3'" "H3'" sing N N 86 C "O3'" "HO3'" sing N N 87 C "C2'" "O2'" sing N N 88 C "C2'" "C1'" sing N N 89 C "C2'" "H2'" sing N N 90 C "O2'" "HO2'" sing N N 91 C "C1'" N1 sing N N 92 C "C1'" "H1'" sing N N 93 C N1 C2 sing N N 94 C N1 C6 sing N N 95 C C2 O2 doub N N 96 C C2 N3 sing N N 97 C N3 C4 doub N N 98 C C4 N4 sing N N 99 C C4 C5 sing N N 100 C N4 H41 sing N N 101 C N4 H42 sing N N 102 C C5 C6 doub N N 103 C C5 H5 sing N N 104 C C6 H6 sing N N 105 CYS N CA sing N N 106 CYS N H sing N N 107 CYS N H2 sing N N 108 CYS CA C sing N N 109 CYS CA CB sing N N 110 CYS CA HA sing N N 111 CYS C O doub N N 112 CYS C OXT sing N N 113 CYS CB SG sing N N 114 CYS CB HB2 sing N N 115 CYS CB HB3 sing N N 116 CYS SG HG sing N N 117 CYS OXT HXT sing N N 118 DA OP3 P sing N N 119 DA OP3 HOP3 sing N N 120 DA P OP1 doub N N 121 DA P OP2 sing N N 122 DA P "O5'" sing N N 123 DA OP2 HOP2 sing N N 124 DA "O5'" "C5'" sing N N 125 DA "C5'" "C4'" sing N N 126 DA "C5'" "H5'" sing N N 127 DA "C5'" "H5''" sing N N 128 DA "C4'" "O4'" sing N N 129 DA "C4'" "C3'" sing N N 130 DA "C4'" "H4'" sing N N 131 DA "O4'" "C1'" sing N N 132 DA "C3'" "O3'" sing N N 133 DA "C3'" "C2'" sing N N 134 DA "C3'" "H3'" sing N N 135 DA "O3'" "HO3'" sing N N 136 DA "C2'" "C1'" sing N N 137 DA "C2'" "H2'" sing N N 138 DA "C2'" "H2''" sing N N 139 DA "C1'" N9 sing N N 140 DA "C1'" "H1'" sing N N 141 DA N9 C8 sing Y N 142 DA N9 C4 sing Y N 143 DA C8 N7 doub Y N 144 DA C8 H8 sing N N 145 DA N7 C5 sing Y N 146 DA C5 C6 sing Y N 147 DA C5 C4 doub Y N 148 DA C6 N6 sing N N 149 DA C6 N1 doub Y N 150 DA N6 H61 sing N N 151 DA N6 H62 sing N N 152 DA N1 C2 sing Y N 153 DA C2 N3 doub Y N 154 DA C2 H2 sing N N 155 DA N3 C4 sing Y N 156 DC OP3 P sing N N 157 DC OP3 HOP3 sing N N 158 DC P OP1 doub N N 159 DC P OP2 sing N N 160 DC P "O5'" sing N N 161 DC OP2 HOP2 sing N N 162 DC "O5'" "C5'" sing N N 163 DC "C5'" "C4'" sing N N 164 DC "C5'" "H5'" sing N N 165 DC "C5'" "H5''" sing N N 166 DC "C4'" "O4'" sing N N 167 DC "C4'" "C3'" sing N N 168 DC "C4'" "H4'" sing N N 169 DC "O4'" "C1'" sing N N 170 DC "C3'" "O3'" sing N N 171 DC "C3'" "C2'" sing N N 172 DC "C3'" "H3'" sing N N 173 DC "O3'" "HO3'" sing N N 174 DC "C2'" "C1'" sing N N 175 DC "C2'" "H2'" sing N N 176 DC "C2'" "H2''" sing N N 177 DC "C1'" N1 sing N N 178 DC "C1'" "H1'" sing N N 179 DC N1 C2 sing N N 180 DC N1 C6 sing N N 181 DC C2 O2 doub N N 182 DC C2 N3 sing N N 183 DC N3 C4 doub N N 184 DC C4 N4 sing N N 185 DC C4 C5 sing N N 186 DC N4 H41 sing N N 187 DC N4 H42 sing N N 188 DC C5 C6 doub N N 189 DC C5 H5 sing N N 190 DC C6 H6 sing N N 191 DG OP3 P sing N N 192 DG OP3 HOP3 sing N N 193 DG P OP1 doub N N 194 DG P OP2 sing N N 195 DG P "O5'" sing N N 196 DG OP2 HOP2 sing N N 197 DG "O5'" "C5'" sing N N 198 DG "C5'" "C4'" sing N N 199 DG "C5'" "H5'" sing N N 200 DG "C5'" "H5''" sing N N 201 DG "C4'" "O4'" sing N N 202 DG "C4'" "C3'" sing N N 203 DG "C4'" "H4'" sing N N 204 DG "O4'" "C1'" sing N N 205 DG "C3'" "O3'" sing N N 206 DG "C3'" "C2'" sing N N 207 DG "C3'" "H3'" sing N N 208 DG "O3'" "HO3'" sing N N 209 DG "C2'" "C1'" sing N N 210 DG "C2'" "H2'" sing N N 211 DG "C2'" "H2''" sing N N 212 DG "C1'" N9 sing N N 213 DG "C1'" "H1'" sing N N 214 DG N9 C8 sing Y N 215 DG N9 C4 sing Y N 216 DG C8 N7 doub Y N 217 DG C8 H8 sing N N 218 DG N7 C5 sing Y N 219 DG C5 C6 sing N N 220 DG C5 C4 doub Y N 221 DG C6 O6 doub N N 222 DG C6 N1 sing N N 223 DG N1 C2 sing N N 224 DG N1 H1 sing N N 225 DG C2 N2 sing N N 226 DG C2 N3 doub N N 227 DG N2 H21 sing N N 228 DG N2 H22 sing N N 229 DG N3 C4 sing N N 230 DT OP3 P sing N N 231 DT OP3 HOP3 sing N N 232 DT P OP1 doub N N 233 DT P OP2 sing N N 234 DT P "O5'" sing N N 235 DT OP2 HOP2 sing N N 236 DT "O5'" "C5'" sing N N 237 DT "C5'" "C4'" sing N N 238 DT "C5'" "H5'" sing N N 239 DT "C5'" "H5''" sing N N 240 DT "C4'" "O4'" sing N N 241 DT "C4'" "C3'" sing N N 242 DT "C4'" "H4'" sing N N 243 DT "O4'" "C1'" sing N N 244 DT "C3'" "O3'" sing N N 245 DT "C3'" "C2'" sing N N 246 DT "C3'" "H3'" sing N N 247 DT "O3'" "HO3'" sing N N 248 DT "C2'" "C1'" sing N N 249 DT "C2'" "H2'" sing N N 250 DT "C2'" "H2''" sing N N 251 DT "C1'" N1 sing N N 252 DT "C1'" "H1'" sing N N 253 DT N1 C2 sing N N 254 DT N1 C6 sing N N 255 DT C2 O2 doub N N 256 DT C2 N3 sing N N 257 DT N3 C4 sing N N 258 DT N3 H3 sing N N 259 DT C4 O4 doub N N 260 DT C4 C5 sing N N 261 DT C5 C7 sing N N 262 DT C5 C6 doub N N 263 DT C7 H71 sing N N 264 DT C7 H72 sing N N 265 DT C7 H73 sing N N 266 DT C6 H6 sing N N 267 GLN N CA sing N N 268 GLN N H sing N N 269 GLN N H2 sing N N 270 GLN CA C sing N N 271 GLN CA CB sing N N 272 GLN CA HA sing N N 273 GLN C O doub N N 274 GLN C OXT sing N N 275 GLN CB CG sing N N 276 GLN CB HB2 sing N N 277 GLN CB HB3 sing N N 278 GLN CG CD sing N N 279 GLN CG HG2 sing N N 280 GLN CG HG3 sing N N 281 GLN CD OE1 doub N N 282 GLN CD NE2 sing N N 283 GLN NE2 HE21 sing N N 284 GLN NE2 HE22 sing N N 285 GLN OXT HXT sing N N 286 GLU N CA sing N N 287 GLU N H sing N N 288 GLU N H2 sing N N 289 GLU CA C sing N N 290 GLU CA CB sing N N 291 GLU CA HA sing N N 292 GLU C O doub N N 293 GLU C OXT sing N N 294 GLU CB CG sing N N 295 GLU CB HB2 sing N N 296 GLU CB HB3 sing N N 297 GLU CG CD sing N N 298 GLU CG HG2 sing N N 299 GLU CG HG3 sing N N 300 GLU CD OE1 doub N N 301 GLU CD OE2 sing N N 302 GLU OE2 HE2 sing N N 303 GLU OXT HXT sing N N 304 GLY N CA sing N N 305 GLY N H sing N N 306 GLY N H2 sing N N 307 GLY CA C sing N N 308 GLY CA HA2 sing N N 309 GLY CA HA3 sing N N 310 GLY C O doub N N 311 GLY C OXT sing N N 312 GLY OXT HXT sing N N 313 HIS N CA sing N N 314 HIS N H sing N N 315 HIS N H2 sing N N 316 HIS CA C sing N N 317 HIS CA CB sing N N 318 HIS CA HA sing N N 319 HIS C O doub N N 320 HIS C OXT sing N N 321 HIS CB CG sing N N 322 HIS CB HB2 sing N N 323 HIS CB HB3 sing N N 324 HIS CG ND1 sing Y N 325 HIS CG CD2 doub Y N 326 HIS ND1 CE1 doub Y N 327 HIS ND1 HD1 sing N N 328 HIS CD2 NE2 sing Y N 329 HIS CD2 HD2 sing N N 330 HIS CE1 NE2 sing Y N 331 HIS CE1 HE1 sing N N 332 HIS NE2 HE2 sing N N 333 HIS OXT HXT sing N N 334 HOH O H1 sing N N 335 HOH O H2 sing N N 336 ILE N CA sing N N 337 ILE N H sing N N 338 ILE N H2 sing N N 339 ILE CA C sing N N 340 ILE CA CB sing N N 341 ILE CA HA sing N N 342 ILE C O doub N N 343 ILE C OXT sing N N 344 ILE CB CG1 sing N N 345 ILE CB CG2 sing N N 346 ILE CB HB sing N N 347 ILE CG1 CD1 sing N N 348 ILE CG1 HG12 sing N N 349 ILE CG1 HG13 sing N N 350 ILE CG2 HG21 sing N N 351 ILE CG2 HG22 sing N N 352 ILE CG2 HG23 sing N N 353 ILE CD1 HD11 sing N N 354 ILE CD1 HD12 sing N N 355 ILE CD1 HD13 sing N N 356 ILE OXT HXT sing N N 357 LEU N CA sing N N 358 LEU N H sing N N 359 LEU N H2 sing N N 360 LEU CA C sing N N 361 LEU CA CB sing N N 362 LEU CA HA sing N N 363 LEU C O doub N N 364 LEU C OXT sing N N 365 LEU CB CG sing N N 366 LEU CB HB2 sing N N 367 LEU CB HB3 sing N N 368 LEU CG CD1 sing N N 369 LEU CG CD2 sing N N 370 LEU CG HG sing N N 371 LEU CD1 HD11 sing N N 372 LEU CD1 HD12 sing N N 373 LEU CD1 HD13 sing N N 374 LEU CD2 HD21 sing N N 375 LEU CD2 HD22 sing N N 376 LEU CD2 HD23 sing N N 377 LEU OXT HXT sing N N 378 LYS N CA sing N N 379 LYS N H sing N N 380 LYS N H2 sing N N 381 LYS CA C sing N N 382 LYS CA CB sing N N 383 LYS CA HA sing N N 384 LYS C O doub N N 385 LYS C OXT sing N N 386 LYS CB CG sing N N 387 LYS CB HB2 sing N N 388 LYS CB HB3 sing N N 389 LYS CG CD sing N N 390 LYS CG HG2 sing N N 391 LYS CG HG3 sing N N 392 LYS CD CE sing N N 393 LYS CD HD2 sing N N 394 LYS CD HD3 sing N N 395 LYS CE NZ sing N N 396 LYS CE HE2 sing N N 397 LYS CE HE3 sing N N 398 LYS NZ HZ1 sing N N 399 LYS NZ HZ2 sing N N 400 LYS NZ HZ3 sing N N 401 LYS OXT HXT sing N N 402 MET N CA sing N N 403 MET N H sing N N 404 MET N H2 sing N N 405 MET CA C sing N N 406 MET CA CB sing N N 407 MET CA HA sing N N 408 MET C O doub N N 409 MET C OXT sing N N 410 MET CB CG sing N N 411 MET CB HB2 sing N N 412 MET CB HB3 sing N N 413 MET CG SD sing N N 414 MET CG HG2 sing N N 415 MET CG HG3 sing N N 416 MET SD CE sing N N 417 MET CE HE1 sing N N 418 MET CE HE2 sing N N 419 MET CE HE3 sing N N 420 MET OXT HXT sing N N 421 PHE N CA sing N N 422 PHE N H sing N N 423 PHE N H2 sing N N 424 PHE CA C sing N N 425 PHE CA CB sing N N 426 PHE CA HA sing N N 427 PHE C O doub N N 428 PHE C OXT sing N N 429 PHE CB CG sing N N 430 PHE CB HB2 sing N N 431 PHE CB HB3 sing N N 432 PHE CG CD1 doub Y N 433 PHE CG CD2 sing Y N 434 PHE CD1 CE1 sing Y N 435 PHE CD1 HD1 sing N N 436 PHE CD2 CE2 doub Y N 437 PHE CD2 HD2 sing N N 438 PHE CE1 CZ doub Y N 439 PHE CE1 HE1 sing N N 440 PHE CE2 CZ sing Y N 441 PHE CE2 HE2 sing N N 442 PHE CZ HZ sing N N 443 PHE OXT HXT sing N N 444 PRO N CA sing N N 445 PRO N CD sing N N 446 PRO N H sing N N 447 PRO CA C sing N N 448 PRO CA CB sing N N 449 PRO CA HA sing N N 450 PRO C O doub N N 451 PRO C OXT sing N N 452 PRO CB CG sing N N 453 PRO CB HB2 sing N N 454 PRO CB HB3 sing N N 455 PRO CG CD sing N N 456 PRO CG HG2 sing N N 457 PRO CG HG3 sing N N 458 PRO CD HD2 sing N N 459 PRO CD HD3 sing N N 460 PRO OXT HXT sing N N 461 SER N CA sing N N 462 SER N H sing N N 463 SER N H2 sing N N 464 SER CA C sing N N 465 SER CA CB sing N N 466 SER CA HA sing N N 467 SER C O doub N N 468 SER C OXT sing N N 469 SER CB OG sing N N 470 SER CB HB2 sing N N 471 SER CB HB3 sing N N 472 SER OG HG sing N N 473 SER OXT HXT sing N N 474 THR N CA sing N N 475 THR N H sing N N 476 THR N H2 sing N N 477 THR CA C sing N N 478 THR CA CB sing N N 479 THR CA HA sing N N 480 THR C O doub N N 481 THR C OXT sing N N 482 THR CB OG1 sing N N 483 THR CB CG2 sing N N 484 THR CB HB sing N N 485 THR OG1 HG1 sing N N 486 THR CG2 HG21 sing N N 487 THR CG2 HG22 sing N N 488 THR CG2 HG23 sing N N 489 THR OXT HXT sing N N 490 TYR N CA sing N N 491 TYR N H sing N N 492 TYR N H2 sing N N 493 TYR CA C sing N N 494 TYR CA CB sing N N 495 TYR CA HA sing N N 496 TYR C O doub N N 497 TYR C OXT sing N N 498 TYR CB CG sing N N 499 TYR CB HB2 sing N N 500 TYR CB HB3 sing N N 501 TYR CG CD1 doub Y N 502 TYR CG CD2 sing Y N 503 TYR CD1 CE1 sing Y N 504 TYR CD1 HD1 sing N N 505 TYR CD2 CE2 doub Y N 506 TYR CD2 HD2 sing N N 507 TYR CE1 CZ doub Y N 508 TYR CE1 HE1 sing N N 509 TYR CE2 CZ sing Y N 510 TYR CE2 HE2 sing N N 511 TYR CZ OH sing N N 512 TYR OH HH sing N N 513 TYR OXT HXT sing N N 514 VAL N CA sing N N 515 VAL N H sing N N 516 VAL N H2 sing N N 517 VAL CA C sing N N 518 VAL CA CB sing N N 519 VAL CA HA sing N N 520 VAL C O doub N N 521 VAL C OXT sing N N 522 VAL CB CG1 sing N N 523 VAL CB CG2 sing N N 524 VAL CB HB sing N N 525 VAL CG1 HG11 sing N N 526 VAL CG1 HG12 sing N N 527 VAL CG1 HG13 sing N N 528 VAL CG2 HG21 sing N N 529 VAL CG2 HG22 sing N N 530 VAL CG2 HG23 sing N N 531 VAL OXT HXT sing N N 532 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4HHT 'double helix' 4HHT 'a-form double helix' 4HHT 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 12 1_555 -0.464 -0.432 -0.194 4.049 -2.857 -7.126 1 C_DG1:DC12_D C 1 ? D 12 ? 19 1 1 B DA 2 1_555 C DT 11 1_555 -0.139 0.249 -0.042 1.450 -11.996 0.722 2 C_DA2:DT11_D C 2 ? D 11 ? 20 1 1 B DA 3 1_555 C DT 10 1_555 0.393 -0.067 0.415 2.723 -15.266 7.030 3 C_DA3:DT10_D C 3 ? D 10 ? 20 1 1 B DT 4 1_555 C DA 9 1_555 0.227 -0.184 -0.102 4.339 -14.913 2.748 4 C_DT4:DA9_D C 4 ? D 9 ? 20 1 1 B DC 5 1_555 C DG 8 1_555 0.286 0.004 0.396 -9.223 -9.037 3.917 5 C_DC5:DG8_D C 5 ? D 8 ? 19 1 1 B DA 6 1_555 C DT 7 1_555 -0.085 -0.066 0.086 -7.618 -9.804 -6.873 6 C_DA6:DT7_D C 6 ? D 7 ? 20 1 1 B DG 7 1_555 C C 6 1_555 -0.609 0.407 0.259 6.228 -0.067 9.741 7 C_DG7:C6_D C 7 ? D 6 ? ? 1 1 B DG 8 1_555 C DC 5 1_555 -0.092 -0.026 -0.702 -11.859 -7.636 7.413 8 C_DG8:DC5_D C 8 ? D 5 ? 19 1 1 B DT 9 1_555 C DA 4 1_555 -0.413 -0.325 -0.201 6.616 6.377 -0.214 9 C_DT9:DA4_D C 9 ? D 4 ? 20 1 1 B DG 10 1_555 C DC 3 1_555 0.079 -0.245 0.065 -12.710 -12.393 -2.098 10 C_DG10:DC3_D C 10 ? D 3 ? 19 1 1 B DT 11 1_555 C DA 2 1_555 -0.272 -0.528 -0.660 -1.750 -7.789 -1.749 11 C_DT11:DA2_D C 11 ? D 2 ? 20 1 1 B DC 12 1_555 C DG 1 1_555 1.044 -0.494 0.061 -5.105 -3.184 6.500 12 C_DC12:DG1_D C 12 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 12 1_555 B DA 2 1_555 C DT 11 1_555 -0.017 0.054 3.339 -3.001 1.716 37.616 -0.143 -0.369 3.329 2.654 4.642 37.769 1 CC_DG1DA2:DT11DC12_DD C 1 ? D 12 ? C 2 ? D 11 ? 1 B DA 2 1_555 C DT 11 1_555 B DA 3 1_555 C DT 10 1_555 -0.081 -0.524 3.232 -3.547 5.812 34.571 -1.711 -0.382 3.098 9.664 5.898 35.215 2 CC_DA2DA3:DT10DT11_DD C 2 ? D 11 ? C 3 ? D 10 ? 1 B DA 3 1_555 C DT 10 1_555 B DT 4 1_555 C DA 9 1_555 -0.133 -0.554 3.147 1.432 3.164 27.534 -1.880 0.605 3.055 6.613 -2.994 27.748 3 CC_DA3DT4:DA9DT10_DD C 3 ? D 10 ? C 4 ? D 9 ? 1 B DT 4 1_555 C DA 9 1_555 B DC 5 1_555 C DG 8 1_555 -0.119 -0.519 3.611 -4.193 0.673 38.370 -0.878 -0.391 3.595 1.020 6.356 38.596 4 CC_DT4DC5:DG8DA9_DD C 4 ? D 9 ? C 5 ? D 8 ? 1 B DC 5 1_555 C DG 8 1_555 B DA 6 1_555 C DT 7 1_555 0.228 -1.520 3.096 1.222 7.505 32.773 -3.729 -0.216 2.699 13.082 -2.130 33.620 5 CC_DC5DA6:DT7DG8_DD C 5 ? D 8 ? C 6 ? D 7 ? 1 B DA 6 1_555 C DT 7 1_555 B DG 7 1_555 C C 6 1_555 -0.351 -2.385 2.990 -3.956 6.563 14.401 -11.981 -0.915 1.773 24.081 14.513 16.304 6 CC_DA6DG7:C6DT7_DD C 6 ? D 7 ? C 7 ? D 6 ? 1 B DG 7 1_555 C C 6 1_555 B DG 8 1_555 C DC 5 1_555 -0.066 -2.125 3.880 6.040 8.308 30.066 -5.567 1.342 3.125 15.458 -11.238 31.734 7 CC_DG7DG8:DC5C6_DD C 7 ? D 6 ? C 8 ? D 5 ? 1 B DG 8 1_555 C DC 5 1_555 B DT 9 1_555 C DA 4 1_555 -0.687 -2.016 3.098 -2.148 9.697 22.943 -7.076 1.053 2.135 23.041 5.105 24.974 8 CC_DG8DT9:DA4DC5_DD C 8 ? D 5 ? C 9 ? D 4 ? 1 B DT 9 1_555 C DA 4 1_555 B DG 10 1_555 C DC 3 1_555 0.083 -0.843 3.823 -0.592 -0.167 36.595 -1.316 -0.227 3.825 -0.267 0.944 36.600 9 CC_DT9DG10:DC3DA4_DD C 9 ? D 4 ? C 10 ? D 3 ? 1 B DG 10 1_555 C DC 3 1_555 B DT 11 1_555 C DA 2 1_555 -0.968 -0.356 2.975 3.530 9.866 33.213 -1.922 2.093 2.651 16.749 -5.993 34.782 10 CC_DG10DT11:DA2DC3_DD C 10 ? D 3 ? C 11 ? D 2 ? 1 B DT 11 1_555 C DA 2 1_555 B DC 12 1_555 C DG 1 1_555 0.271 0.328 3.489 -6.172 1.931 46.809 0.242 -0.874 3.439 2.417 7.726 47.228 11 CC_DT11DC12:DG1DA2_DD C 11 ? D 2 ? C 12 ? D 1 ? # _atom_sites.entry_id 4HHT _atom_sites.fract_transf_matrix[1][1] 0.009350 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008204 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020997 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017177 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_