HEADER HYDROLASE/HYDROLASE INHIBITOR 26-OCT-12 4HQR TITLE CRYSTAL STRUCTURE OF MUTANT FORM OF CASPASE-7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASPASE-7; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 47-303; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: AC-ASP-GLU-VAL-ASP-ALDEHYDE; COMPND 9 CHAIN: E, F; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21A; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES KEYWDS CASPASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.LEE,H.J.KANG,K.-H.BAE,S.J.KIM,S.J.CHUNG REVDAT 3 06-DEC-23 4HQR 1 REMARK REVDAT 2 08-NOV-23 4HQR 1 SEQADV LINK REVDAT 1 11-SEP-13 4HQR 0 JRNL AUTH H.J.KANG,Y.M.LEE,K.H.BAE,S.J.KIM,S.J.CHUNG JRNL TITL STRUCTURAL ASYMMETRY OF PROCASPASE-7 BOUND TO A SPECIFIC JRNL TITL 2 INHIBITOR JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 1514 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 23897474 JRNL DOI 10.1107/S0907444913010196 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.21 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 18188 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 884 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3647 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.64200 REMARK 3 B22 (A**2) : 6.64200 REMARK 3 B33 (A**2) : -13.28300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 43.86 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HQR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000075802. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 6C1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1. REMARK 200 MONOCHROMATOR : YALE MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18228 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1K86 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM FORMATE, PH 4.6, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 123.36667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.68333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 61.68333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 123.36667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 REMARK 400 THE AC-ASP-GLU-VAL-ASP-ALDEHYDE IS PEPTIDE-LIKE, A MEMBER OF REMARK 400 INHIBITOR CLASS. REMARK 400 REMARK 400 GROUP: 1 REMARK 400 NAME: AC-ASP-GLU-VAL-ASP-ALDEHYDE REMARK 400 CHAIN: E, F REMARK 400 COMPONENT_1: PEPTIDE LIKE POLYMER REMARK 400 DESCRIPTION: NULL REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 46 REMARK 465 SER A 47 REMARK 465 ILE A 48 REMARK 465 LYS A 49 REMARK 465 THR A 50 REMARK 465 THR A 51 REMARK 465 ARG A 52 REMARK 465 ASP A 53 REMARK 465 ARG A 54 REMARK 465 VAL A 55 REMARK 465 PRO A 56 REMARK 465 ASP A 192 REMARK 465 ASP A 193 REMARK 465 GLY A 194 REMARK 465 ILE A 195 REMARK 465 GLN A 196 REMARK 465 ALA A 197 REMARK 465 ALA A 198 REMARK 465 SER A 199 REMARK 465 GLY A 200 REMARK 465 PRO A 201 REMARK 465 ILE A 202 REMARK 465 ASN A 203 REMARK 465 ASP A 204 REMARK 465 LEU A 204A REMARK 465 VAL A 204B REMARK 465 PRO A 204C REMARK 465 ARG A 204D REMARK 465 GLY A 204E REMARK 465 SER A 204F REMARK 465 THR A 205 REMARK 465 ASP A 206 REMARK 465 ALA A 207 REMARK 465 ASN A 208 REMARK 465 PRO A 209 REMARK 465 ARG A 210 REMARK 465 SER A 275 REMARK 465 GLN A 276 REMARK 465 SER A 277 REMARK 465 ASP A 278 REMARK 465 ASP A 279 REMARK 465 PRO A 280 REMARK 465 HIS A 281 REMARK 465 PHE A 282 REMARK 465 HIS A 283 REMARK 465 GLU A 284 REMARK 465 LYS A 285 REMARK 465 LEU A 304 REMARK 465 GLU A 305 REMARK 465 HIS A 306 REMARK 465 HIS A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 465 HIS A 311 REMARK 465 MET B 46 REMARK 465 SER B 47 REMARK 465 ILE B 48 REMARK 465 LYS B 49 REMARK 465 THR B 50 REMARK 465 THR B 51 REMARK 465 ARG B 52 REMARK 465 ASP B 53 REMARK 465 ARG B 54 REMARK 465 VAL B 55 REMARK 465 PRO B 56 REMARK 465 ALA B 197 REMARK 465 ALA B 198 REMARK 465 SER B 199 REMARK 465 GLY B 200 REMARK 465 PRO B 201 REMARK 465 ILE B 202 REMARK 465 ASN B 203 REMARK 465 ASP B 204 REMARK 465 LEU B 204A REMARK 465 VAL B 204B REMARK 465 PRO B 204C REMARK 465 ARG B 204D REMARK 465 GLY B 204E REMARK 465 SER B 204F REMARK 465 THR B 205 REMARK 465 ASP B 206 REMARK 465 ALA B 207 REMARK 465 ASN B 208 REMARK 465 PRO B 209 REMARK 465 ARG B 210 REMARK 465 TYR B 211 REMARK 465 LYS B 212 REMARK 465 ILE B 213 REMARK 465 LEU B 304 REMARK 465 GLU B 305 REMARK 465 HIS B 306 REMARK 465 HIS B 307 REMARK 465 HIS B 308 REMARK 465 HIS B 309 REMARK 465 HIS B 310 REMARK 465 HIS B 311 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 190 N - CA - C ANGL. DEV. = 23.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 87 76.01 -105.29 REMARK 500 ASP A 113 67.13 25.42 REMARK 500 CYS A 136 -175.79 -170.10 REMARK 500 SER A 143 -159.11 -149.40 REMARK 500 GLU A 146 -169.78 -124.92 REMARK 500 GLU A 147 100.27 -48.78 REMARK 500 GLU A 190 22.47 -55.74 REMARK 500 ARG A 271 20.63 -74.12 REMARK 500 GLU B 147 114.43 -33.56 REMARK 500 ASN B 148 -3.23 67.11 REMARK 500 VAL B 215 43.04 -90.07 REMARK 500 ASP B 218 32.46 74.03 REMARK 500 ARG B 271 -62.79 -100.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 VAL E 4 -18.69 REMARK 500 VAL F 4 -16.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN E OF AC-ASP-GLU-VAL-ASP REMARK 800 -ALDEHYDE REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN F OF AC-ASP-GLU-VAL-ASP REMARK 800 -ALDEHYDE REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HQ0 RELATED DB: PDB DBREF 4HQR A 47 303 UNP P55210 CASP7_HUMAN 47 303 DBREF 4HQR B 47 303 UNP P55210 CASP7_HUMAN 47 303 DBREF 4HQR E 1 5 PDB 4HQR 4HQR 1 5 DBREF 4HQR F 1 5 PDB 4HQR 4HQR 1 5 SEQADV 4HQR MET A 46 UNP P55210 EXPRESSION TAG SEQADV 4HQR ALA A 198 UNP P55210 ASP 198 ENGINEERED MUTATION SEQADV 4HQR LEU A 204A UNP P55210 INSERTION SEQADV 4HQR VAL A 204B UNP P55210 INSERTION SEQADV 4HQR PRO A 204C UNP P55210 INSERTION SEQADV 4HQR ARG A 204D UNP P55210 INSERTION SEQADV 4HQR GLY A 204E UNP P55210 INSERTION SEQADV 4HQR SER A 204F UNP P55210 INSERTION SEQADV 4HQR LEU A 304 UNP P55210 EXPRESSION TAG SEQADV 4HQR GLU A 305 UNP P55210 EXPRESSION TAG SEQADV 4HQR HIS A 306 UNP P55210 EXPRESSION TAG SEQADV 4HQR HIS A 307 UNP P55210 EXPRESSION TAG SEQADV 4HQR HIS A 308 UNP P55210 EXPRESSION TAG SEQADV 4HQR HIS A 309 UNP P55210 EXPRESSION TAG SEQADV 4HQR HIS A 310 UNP P55210 EXPRESSION TAG SEQADV 4HQR HIS A 311 UNP P55210 EXPRESSION TAG SEQADV 4HQR MET B 46 UNP P55210 EXPRESSION TAG SEQADV 4HQR ALA B 198 UNP P55210 ASP 198 ENGINEERED MUTATION SEQADV 4HQR LEU B 204A UNP P55210 INSERTION SEQADV 4HQR VAL B 204B UNP P55210 INSERTION SEQADV 4HQR PRO B 204C UNP P55210 INSERTION SEQADV 4HQR ARG B 204D UNP P55210 INSERTION SEQADV 4HQR GLY B 204E UNP P55210 INSERTION SEQADV 4HQR SER B 204F UNP P55210 INSERTION SEQADV 4HQR LEU B 304 UNP P55210 EXPRESSION TAG SEQADV 4HQR GLU B 305 UNP P55210 EXPRESSION TAG SEQADV 4HQR HIS B 306 UNP P55210 EXPRESSION TAG SEQADV 4HQR HIS B 307 UNP P55210 EXPRESSION TAG SEQADV 4HQR HIS B 308 UNP P55210 EXPRESSION TAG SEQADV 4HQR HIS B 309 UNP P55210 EXPRESSION TAG SEQADV 4HQR HIS B 310 UNP P55210 EXPRESSION TAG SEQADV 4HQR HIS B 311 UNP P55210 EXPRESSION TAG SEQRES 1 A 272 MET SER ILE LYS THR THR ARG ASP ARG VAL PRO THR TYR SEQRES 2 A 272 GLN TYR ASN MET ASN PHE GLU LYS LEU GLY LYS CYS ILE SEQRES 3 A 272 ILE ILE ASN ASN LYS ASN PHE ASP LYS VAL THR GLY MET SEQRES 4 A 272 GLY VAL ARG ASN GLY THR ASP LYS ASP ALA GLU ALA LEU SEQRES 5 A 272 PHE LYS CYS PHE ARG SER LEU GLY PHE ASP VAL ILE VAL SEQRES 6 A 272 TYR ASN ASP CYS SER CYS ALA LYS MET GLN ASP LEU LEU SEQRES 7 A 272 LYS LYS ALA SER GLU GLU ASP HIS THR ASN ALA ALA CYS SEQRES 8 A 272 PHE ALA CYS ILE LEU LEU SER HIS GLY GLU GLU ASN VAL SEQRES 9 A 272 ILE TYR GLY LYS ASP GLY VAL THR PRO ILE LYS ASP LEU SEQRES 10 A 272 THR ALA HIS PHE ARG GLY ASP ARG CYS LYS THR LEU LEU SEQRES 11 A 272 GLU LYS PRO LYS LEU PHE PHE ILE GLN ALA CYS ARG GLY SEQRES 12 A 272 THR GLU LEU ASP ASP GLY ILE GLN ALA ALA SER GLY PRO SEQRES 13 A 272 ILE ASN ASP LEU VAL PRO ARG GLY SER THR ASP ALA ASN SEQRES 14 A 272 PRO ARG TYR LYS ILE PRO VAL GLU ALA ASP PHE LEU PHE SEQRES 15 A 272 ALA TYR SER THR VAL PRO GLY TYR TYR SER TRP ARG SER SEQRES 16 A 272 PRO GLY ARG GLY SER TRP PHE VAL GLN ALA LEU CYS SER SEQRES 17 A 272 ILE LEU GLU GLU HIS GLY LYS ASP LEU GLU ILE MET GLN SEQRES 18 A 272 ILE LEU THR ARG VAL ASN ASP ARG VAL ALA ARG HIS PHE SEQRES 19 A 272 GLU SER GLN SER ASP ASP PRO HIS PHE HIS GLU LYS LYS SEQRES 20 A 272 GLN ILE PRO CYS VAL VAL SER MET LEU THR LYS GLU LEU SEQRES 21 A 272 TYR PHE SER GLN LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 272 MET SER ILE LYS THR THR ARG ASP ARG VAL PRO THR TYR SEQRES 2 B 272 GLN TYR ASN MET ASN PHE GLU LYS LEU GLY LYS CYS ILE SEQRES 3 B 272 ILE ILE ASN ASN LYS ASN PHE ASP LYS VAL THR GLY MET SEQRES 4 B 272 GLY VAL ARG ASN GLY THR ASP LYS ASP ALA GLU ALA LEU SEQRES 5 B 272 PHE LYS CYS PHE ARG SER LEU GLY PHE ASP VAL ILE VAL SEQRES 6 B 272 TYR ASN ASP CYS SER CYS ALA LYS MET GLN ASP LEU LEU SEQRES 7 B 272 LYS LYS ALA SER GLU GLU ASP HIS THR ASN ALA ALA CYS SEQRES 8 B 272 PHE ALA CYS ILE LEU LEU SER HIS GLY GLU GLU ASN VAL SEQRES 9 B 272 ILE TYR GLY LYS ASP GLY VAL THR PRO ILE LYS ASP LEU SEQRES 10 B 272 THR ALA HIS PHE ARG GLY ASP ARG CYS LYS THR LEU LEU SEQRES 11 B 272 GLU LYS PRO LYS LEU PHE PHE ILE GLN ALA CYS ARG GLY SEQRES 12 B 272 THR GLU LEU ASP ASP GLY ILE GLN ALA ALA SER GLY PRO SEQRES 13 B 272 ILE ASN ASP LEU VAL PRO ARG GLY SER THR ASP ALA ASN SEQRES 14 B 272 PRO ARG TYR LYS ILE PRO VAL GLU ALA ASP PHE LEU PHE SEQRES 15 B 272 ALA TYR SER THR VAL PRO GLY TYR TYR SER TRP ARG SER SEQRES 16 B 272 PRO GLY ARG GLY SER TRP PHE VAL GLN ALA LEU CYS SER SEQRES 17 B 272 ILE LEU GLU GLU HIS GLY LYS ASP LEU GLU ILE MET GLN SEQRES 18 B 272 ILE LEU THR ARG VAL ASN ASP ARG VAL ALA ARG HIS PHE SEQRES 19 B 272 GLU SER GLN SER ASP ASP PRO HIS PHE HIS GLU LYS LYS SEQRES 20 B 272 GLN ILE PRO CYS VAL VAL SER MET LEU THR LYS GLU LEU SEQRES 21 B 272 TYR PHE SER GLN LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 E 5 ACE ASP GLU VAL ASJ SEQRES 1 F 5 ACE ASP GLU VAL ASJ HET ACE E 1 3 HET ASJ E 5 8 HET ACE F 1 3 HET ASJ F 5 8 HETNAM ACE ACETYL GROUP HETNAM ASJ (3S)-3-AMINO-4-HYDROXYBUTANOIC ACID FORMUL 3 ACE 2(C2 H4 O) FORMUL 3 ASJ 2(C4 H9 N O3) HELIX 1 1 ASP A 79 GLY A 83 5 5 HELIX 2 2 GLY A 89 GLY A 105 1 17 HELIX 3 3 SER A 115 GLU A 129 1 15 HELIX 4 4 ILE A 159 ALA A 164 1 6 HELIX 5 5 HIS A 165 ARG A 167 5 3 HELIX 6 6 CYS A 171 LEU A 175 5 5 HELIX 7 7 TRP A 240 GLY A 253 1 14 HELIX 8 8 GLU A 257 ARG A 271 1 15 HELIX 9 9 ASP B 79 GLY B 83 5 5 HELIX 10 10 GLY B 89 LEU B 104 1 16 HELIX 11 11 SER B 115 GLU B 128 1 14 HELIX 12 12 ILE B 159 HIS B 165 1 7 HELIX 13 13 CYS B 171 LEU B 175 5 5 HELIX 14 14 TRP B 240 GLY B 253 1 14 HELIX 15 15 GLU B 257 HIS B 272 1 16 HELIX 16 16 ASP B 279 HIS B 283 5 5 SHEET 1 A12 ASP A 107 ASN A 112 0 SHEET 2 A12 LYS A 66 ASN A 74 1 N ASN A 74 O TYR A 111 SHEET 3 A12 ALA A 134 LEU A 142 1 O ILE A 140 N ILE A 73 SHEET 4 A12 LYS A 179 GLN A 184 1 O GLN A 184 N LEU A 141 SHEET 5 A12 PHE A 219 TYR A 223 1 O LEU A 220 N PHE A 181 SHEET 6 A12 CYS A 290 SER A 293 -1 O VAL A 292 N PHE A 221 SHEET 7 A12 CYS B 290 SER B 293 -1 O SER B 293 N VAL A 291 SHEET 8 A12 PHE B 219 TYR B 223 -1 N PHE B 221 O VAL B 292 SHEET 9 A12 LYS B 179 GLN B 184 1 N PHE B 181 O ALA B 222 SHEET 10 A12 ALA B 134 LEU B 142 1 N LEU B 141 O GLN B 184 SHEET 11 A12 LYS B 66 ASN B 74 1 N LYS B 69 O ALA B 138 SHEET 12 A12 ASP B 107 ASN B 112 1 O TYR B 111 N ASN B 74 SHEET 1 B 3 GLY A 145 GLU A 146 0 SHEET 2 B 3 VAL A 149 GLY A 152 -1 O VAL A 149 N GLU A 146 SHEET 3 B 3 GLY A 155 PRO A 158 -1 O GLY A 155 N GLY A 152 SHEET 1 C 3 GLY A 238 SER A 239 0 SHEET 2 C 3 TRP A 232 SER A 234 -1 N SER A 234 O GLY A 238 SHEET 3 C 3 GLU E 3 VAL E 4 -1 O GLU E 3 N ARG A 233 SHEET 1 D 3 GLY B 145 GLU B 146 0 SHEET 2 D 3 VAL B 149 TYR B 151 -1 O VAL B 149 N GLU B 146 SHEET 3 D 3 VAL B 156 PRO B 158 -1 O THR B 157 N ILE B 150 SHEET 1 E 2 GLY B 188 GLU B 190 0 SHEET 2 E 2 GLY B 228 TYR B 229 1 O GLY B 228 N GLU B 190 SHEET 1 F 3 GLY B 238 SER B 239 0 SHEET 2 F 3 TRP B 232 SER B 234 -1 N SER B 234 O GLY B 238 SHEET 3 F 3 GLU F 3 VAL F 4 -1 O GLU F 3 N ARG B 233 LINK SG CYS A 186 C ASJ E 5 1555 1555 1.82 LINK SG CYS B 186 C ASJ F 5 1555 1555 1.80 LINK C ACE E 1 N ASP E 2 1555 1555 1.33 LINK C VAL E 4 N ASJ E 5 1555 1555 1.40 LINK C ACE F 1 N ASP F 2 1555 1555 1.33 LINK C VAL F 4 N ASJ F 5 1555 1555 1.39 SITE 1 AC1 11 ARG A 87 HIS A 144 GLY A 145 GLN A 184 SITE 2 AC1 11 CYS A 186 TYR A 230 SER A 231 TRP A 232 SITE 3 AC1 11 ARG A 233 SER A 234 PRO A 235 SITE 1 AC2 13 ARG B 87 HIS B 144 GLY B 145 GLN B 184 SITE 2 AC2 13 CYS B 186 SER B 231 TRP B 232 ARG B 233 SITE 3 AC2 13 SER B 234 PRO B 235 TRP B 240 SER B 275 SITE 4 AC2 13 GLN B 276 CRYST1 90.480 90.480 185.050 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011052 0.006381 0.000000 0.00000 SCALE2 0.000000 0.012762 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005404 0.00000