HEADER TRANSFERASE/DNA 13-NOV-12 4HYK TITLE DBH TERNARY COMPLEX (SUBSTRATES PARTIALLY DISORDERED) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POL IV; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*GP*GP*GP*AP*AP*GP*CP*CP*GP*G)-3'); COMPND 9 CHAIN: P; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: PRIMER DNA; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'- COMPND 14 D(*TP*TP*CP*CP*GP*CP*CP*CP*CP*GP*GP*CP*TP*TP*CP*CP*C)-3'); COMPND 15 CHAIN: T; COMPND 16 ENGINEERED: YES; COMPND 17 OTHER_DETAILS: TEMPLATE DNA SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS ACIDOCALDARIUS; SOURCE 3 ORGANISM_TAXID: 330779; SOURCE 4 STRAIN: ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770; SOURCE 5 GENE: DBH, SACI_0554; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BLR(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PKKT7-H; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630; SOURCE 14 OTHER_DETAILS: CHEMICALLY SYNTHESIZED; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630; SOURCE 19 OTHER_DETAILS: CHEMICALLY SYNTHESIZED KEYWDS Y-FAMILY DNA POLYMERASE, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.D.PATA,R.C.WILSON REVDAT 3 28-FEB-24 4HYK 1 REMARK REVDAT 2 13-FEB-13 4HYK 1 JRNL REVDAT 1 02-JAN-13 4HYK 0 JRNL AUTH R.C.WILSON,M.A.JACKSON,J.D.PATA JRNL TITL Y-FAMILY POLYMERASE CONFORMATION IS A MAJOR DETERMINANT OF JRNL TITL 2 FIDELITY AND TRANSLESION SPECIFICITY. JRNL REF STRUCTURE V. 21 20 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 23245850 JRNL DOI 10.1016/J.STR.2012.11.005 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.530 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 12411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.313 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1241 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7467 - 5.8152 0.97 1414 158 0.2359 0.2842 REMARK 3 2 5.8152 - 4.6213 0.98 1366 152 0.2189 0.2841 REMARK 3 3 4.6213 - 4.0387 0.98 1329 147 0.1882 0.3053 REMARK 3 4 4.0387 - 3.6702 0.98 1313 146 0.2353 0.3393 REMARK 3 5 3.6702 - 3.4075 0.95 1278 141 0.2345 0.3573 REMARK 3 6 3.4075 - 3.2069 0.93 1235 138 0.2511 0.3067 REMARK 3 7 3.2069 - 3.0464 0.89 1188 131 0.2713 0.3431 REMARK 3 8 3.0464 - 2.9139 0.86 1141 127 0.3001 0.3529 REMARK 3 9 2.9139 - 2.8020 0.68 906 101 0.3200 0.4022 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 45.75 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 11.39240 REMARK 3 B22 (A**2) : 11.39240 REMARK 3 B33 (A**2) : -22.78480 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3076 REMARK 3 ANGLE : 1.213 4205 REMARK 3 CHIRALITY : 0.080 490 REMARK 3 PLANARITY : 0.007 479 REMARK 3 DIHEDRAL : 18.532 1215 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN P AND RESID 1:8 ) OR ( CHAIN T AND RESID REMARK 3 10:17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8398 -6.9281 -13.6704 REMARK 3 T TENSOR REMARK 3 T11: 0.5598 T22: 0.8711 REMARK 3 T33: 0.7620 T12: -0.0551 REMARK 3 T13: -0.1587 T23: 0.0212 REMARK 3 L TENSOR REMARK 3 L11: 0.2409 L22: 0.5615 REMARK 3 L33: 0.2294 L12: 0.3653 REMARK 3 L13: 0.2357 L23: 0.3555 REMARK 3 S TENSOR REMARK 3 S11: 0.1118 S12: -0.1624 S13: 0.4278 REMARK 3 S21: -0.4739 S22: -0.3977 S23: 0.7625 REMARK 3 S31: -0.2767 S32: -0.7856 S33: -0.0015 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 1:244 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.6408 18.8073 -9.7924 REMARK 3 T TENSOR REMARK 3 T11: 0.4766 T22: 0.1654 REMARK 3 T33: 0.4194 T12: 0.4580 REMARK 3 T13: 0.0079 T23: 0.0294 REMARK 3 L TENSOR REMARK 3 L11: 1.8463 L22: 1.9828 REMARK 3 L33: 2.8612 L12: -0.5285 REMARK 3 L13: 0.1141 L23: -0.4325 REMARK 3 S TENSOR REMARK 3 S11: -0.1073 S12: -0.1846 S13: -0.1378 REMARK 3 S21: 0.4807 S22: 0.1995 S23: 0.3362 REMARK 3 S31: 0.0043 S32: -0.4616 S33: -0.0196 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 245:343 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.8384 -4.1580 -28.6938 REMARK 3 T TENSOR REMARK 3 T11: 0.7939 T22: 0.6241 REMARK 3 T33: 0.4526 T12: -0.1418 REMARK 3 T13: 0.0560 T23: 0.0168 REMARK 3 L TENSOR REMARK 3 L11: 1.9954 L22: 2.1726 REMARK 3 L33: 2.1914 L12: -1.1864 REMARK 3 L13: -1.5111 L23: 0.4863 REMARK 3 S TENSOR REMARK 3 S11: -0.1083 S12: 0.6174 S13: -0.3267 REMARK 3 S21: -0.5675 S22: 0.1448 S23: -0.0905 REMARK 3 S31: 1.0049 S32: -0.3384 S33: -0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HYK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000076080. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-AUG-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : OSMICS CONFOCAL OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12423 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 57.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.21600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER IN PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG-3350, 100 MM HEPES PH 7.55, REMARK 280 100MM CA(OAC)2, 2.5% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.96150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 61.32100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 61.32100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 17.48075 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 61.32100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 61.32100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 52.44225 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 61.32100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 61.32100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 17.48075 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 61.32100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 61.32100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 52.44225 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 34.96150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 34 REMARK 465 GLY A 35 REMARK 465 ARG A 36 REMARK 465 THR A 37 REMARK 465 LYS A 38 REMARK 465 THR A 39 REMARK 465 SER A 40 REMARK 465 ASN A 344 REMARK 465 LYS A 345 REMARK 465 THR A 346 REMARK 465 ASN A 347 REMARK 465 LEU A 348 REMARK 465 SER A 349 REMARK 465 ASP A 350 REMARK 465 PHE A 351 REMARK 465 PHE A 352 REMARK 465 ASP A 353 REMARK 465 ILE A 354 REMARK 465 DG P 9 REMARK 465 DG P 10 REMARK 465 DT T 1 REMARK 465 DT T 2 REMARK 465 DC T 3 REMARK 465 DC T 4 REMARK 465 DG T 5 REMARK 465 DC T 6 REMARK 465 DC T 7 REMARK 465 DC T 8 REMARK 465 DC T 9 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG P 2 O4' - C1' - N9 ANGL. DEV. = 7.0 DEGREES REMARK 500 DC P 7 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT T 13 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT T 14 N3 - C4 - O4 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 44 -89.47 -91.32 REMARK 500 ALA A 46 124.15 -170.48 REMARK 500 ASN A 47 -177.28 -65.94 REMARK 500 LYS A 52 1.75 -52.49 REMARK 500 SER A 103 -177.06 -170.48 REMARK 500 GLU A 137 16.93 -143.11 REMARK 500 LYS A 138 14.61 44.19 REMARK 500 ASN A 177 -85.38 -66.43 REMARK 500 GLU A 178 93.18 -60.63 REMARK 500 LEU A 179 100.79 -162.84 REMARK 500 TYR A 211 -55.17 61.23 REMARK 500 LEU A 227 -73.16 -59.77 REMARK 500 SER A 235 50.00 -169.46 REMARK 500 TYR A 254 -168.53 -121.94 REMARK 500 ARG A 257 26.10 -150.52 REMARK 500 ASN A 275 -23.13 -140.56 REMARK 500 LYS A 298 111.06 -160.02 REMARK 500 LYS A 298 111.11 -160.04 REMARK 500 LYS A 327 -52.20 61.16 REMARK 500 ARG A 328 -89.48 -70.08 REMARK 500 ARG A 332 -62.01 -106.01 REMARK 500 ASN A 340 80.50 39.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4F4W RELATED DB: PDB REMARK 900 DBH-DPO4-DPO4 #1 REMARK 900 RELATED ID: 4F4X RELATED DB: PDB REMARK 900 DBH-DPO4-DPO4 #2 REMARK 900 RELATED ID: 4F4Y RELATED DB: PDB REMARK 900 DBH-DPO4-DBH REMARK 900 RELATED ID: 4F4Z RELATED DB: PDB REMARK 900 DPO4-DPO4-DBH REMARK 900 RELATED ID: 4F50 RELATED DB: PDB REMARK 900 DBH-DBH-DPO4 DBREF 4HYK A 1 354 UNP Q4JB80 DPO4_SULAC 1 354 DBREF 4HYK P 1 10 PDB 4HYK 4HYK 1 10 DBREF 4HYK T 1 17 PDB 4HYK 4HYK 1 17 SEQRES 1 A 354 MET ILE VAL ILE PHE VAL ASP PHE ASP TYR PHE PHE ALA SEQRES 2 A 354 GLN VAL GLU GLU VAL LEU ASN PRO GLN TYR LYS GLY LYS SEQRES 3 A 354 PRO LEU VAL VAL CYS VAL TYR SER GLY ARG THR LYS THR SEQRES 4 A 354 SER GLY ALA VAL ALA THR ALA ASN TYR GLU ALA ARG LYS SEQRES 5 A 354 LEU GLY VAL LYS ALA GLY MET PRO ILE ILE LYS ALA MET SEQRES 6 A 354 GLN ILE ALA PRO SER ALA ILE TYR VAL PRO MET ARG LYS SEQRES 7 A 354 PRO ILE TYR GLU ALA PHE SER ASN ARG ILE MET ASN LEU SEQRES 8 A 354 LEU ASN LYS HIS ALA ASP LYS ILE GLU VAL ALA SER ILE SEQRES 9 A 354 ASP GLU ALA TYR LEU ASP VAL THR ASN LYS VAL GLU GLY SEQRES 10 A 354 ASN PHE GLU ASN GLY ILE GLU LEU ALA ARG LYS ILE LYS SEQRES 11 A 354 GLN GLU ILE LEU GLU LYS GLU LYS ILE THR VAL THR VAL SEQRES 12 A 354 GLY VAL ALA PRO ASN LYS ILE LEU ALA LYS ILE ILE ALA SEQRES 13 A 354 ASP LYS SER LYS PRO ASN GLY LEU GLY VAL ILE ARG PRO SEQRES 14 A 354 THR GLU VAL GLN ASP PHE LEU ASN GLU LEU ASP ILE ASP SEQRES 15 A 354 GLU ILE PRO GLY ILE GLY SER VAL LEU ALA ARG ARG LEU SEQRES 16 A 354 ASN GLU LEU GLY ILE GLN LYS LEU ARG ASP ILE LEU SER SEQRES 17 A 354 LYS ASN TYR ASN GLU LEU GLU LYS ILE THR GLY LYS ALA SEQRES 18 A 354 LYS ALA LEU TYR LEU LEU LYS LEU ALA GLN ASN LYS TYR SEQRES 19 A 354 SER GLU PRO VAL GLU ASN LYS SER LYS ILE PRO HIS GLY SEQRES 20 A 354 ARG TYR LEU THR LEU PRO TYR ASN THR ARG ASP VAL LYS SEQRES 21 A 354 VAL ILE LEU PRO TYR LEU LYS LYS ALA ILE ASN GLU ALA SEQRES 22 A 354 TYR ASN LYS VAL ASN GLY ILE PRO MET ARG ILE THR VAL SEQRES 23 A 354 ILE ALA ILE MET GLU ASP LEU ASP ILE LEU SER LYS GLY SEQRES 24 A 354 LYS LYS PHE LYS HIS GLY ILE SER ILE ASP ASN ALA TYR SEQRES 25 A 354 LYS VAL ALA GLU ASP LEU LEU ARG GLU LEU LEU VAL ARG SEQRES 26 A 354 ASP LYS ARG ARG ASN VAL ARG ARG ILE GLY VAL LYS LEU SEQRES 27 A 354 ASP ASN ILE ILE ILE ASN LYS THR ASN LEU SER ASP PHE SEQRES 28 A 354 PHE ASP ILE SEQRES 1 P 10 DG DG DG DA DA DG DC DC DG DG SEQRES 1 T 17 DT DT DC DC DG DC DC DC DC DG DG DC DT SEQRES 2 T 17 DT DC DC DC HELIX 1 1 TYR A 10 ASN A 20 1 11 HELIX 2 2 PRO A 21 LYS A 24 5 4 HELIX 3 3 ASN A 47 LYS A 52 1 6 HELIX 4 4 PRO A 60 ALA A 68 1 9 HELIX 5 5 ARG A 77 ASN A 93 1 17 HELIX 6 6 ASN A 118 LYS A 138 1 21 HELIX 7 7 ASN A 148 LYS A 158 1 11 HELIX 8 8 ARG A 168 THR A 170 5 3 HELIX 9 9 GLU A 171 GLU A 178 1 8 HELIX 10 10 ASP A 180 ILE A 184 5 5 HELIX 11 11 SER A 189 GLY A 199 1 11 HELIX 12 12 LYS A 202 LEU A 207 5 6 HELIX 13 13 TYR A 211 LYS A 216 1 6 HELIX 14 14 GLY A 219 GLN A 231 1 13 HELIX 15 15 ASP A 258 TYR A 274 1 17 HELIX 16 16 SER A 307 LYS A 327 1 21 SHEET 1 A 8 LEU A 164 VAL A 166 0 SHEET 2 A 8 VAL A 141 ALA A 146 1 N VAL A 145 O GLY A 165 SHEET 3 A 8 VAL A 3 PHE A 8 -1 N VAL A 3 O ALA A 146 SHEET 4 A 8 GLU A 106 ASP A 110 -1 O ALA A 107 N VAL A 6 SHEET 5 A 8 LYS A 98 VAL A 101 -1 N GLU A 100 O TYR A 108 SHEET 6 A 8 LYS A 241 SER A 242 1 O LYS A 241 N VAL A 101 SHEET 7 A 8 VAL A 331 ILE A 342 -1 O ILE A 341 N SER A 242 SHEET 8 A 8 TYR A 249 THR A 251 -1 N LEU A 250 O ILE A 334 SHEET 1 B 9 LEU A 164 VAL A 166 0 SHEET 2 B 9 VAL A 141 ALA A 146 1 N VAL A 145 O GLY A 165 SHEET 3 B 9 VAL A 3 PHE A 8 -1 N VAL A 3 O ALA A 146 SHEET 4 B 9 GLU A 106 ASP A 110 -1 O ALA A 107 N VAL A 6 SHEET 5 B 9 LYS A 98 VAL A 101 -1 N GLU A 100 O TYR A 108 SHEET 6 B 9 LYS A 241 SER A 242 1 O LYS A 241 N VAL A 101 SHEET 7 B 9 VAL A 331 ILE A 342 -1 O ILE A 341 N SER A 242 SHEET 8 B 9 ILE A 280 MET A 290 -1 N ILE A 287 O GLY A 335 SHEET 9 B 9 ILE A 295 LYS A 301 -1 O LYS A 298 N VAL A 286 SHEET 1 C 3 ALA A 42 ALA A 46 0 SHEET 2 C 3 LEU A 28 VAL A 32 -1 N VAL A 30 O ALA A 44 SHEET 3 C 3 ILE A 72 PRO A 75 1 O VAL A 74 N VAL A 29 CISPEP 1 LYS A 160 PRO A 161 0 1.48 CRYST1 122.642 122.642 69.923 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008154 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008154 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014301 0.00000