HEADER CELL ADHESION 14-NOV-12 4HZA TITLE CRYSTAL STRUCTURE OF THE IMMUNOGLOBULIN VARIABLE DOMAIN OF NECTIN-2 IN TITLE 2 MONOCLINIC FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLIOVIRUS RECEPTOR-RELATED PROTEIN 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: IG-LIKE V-TYPE DOMAIN RESIDUES 32-158; COMPND 5 SYNONYM: HERPES VIRUS ENTRY MEDIATOR B, HERPESVIRUS ENTRY MEDIATOR B, COMPND 6 HVEB, NECTIN-2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HVEB, PRR2, PVRL2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS IG-DOMAIN, CELL-ADHESION MOLECULE, VIRUS ENTRY RECEPTOR, STRUCTURAL KEYWDS 2 GENOMICS, PSI-BIOLOGY, NEW YORK STRUCTURAL GENOMICS RESEARCH KEYWDS 3 CONSORTIUM, NYSGRC, CELL ADHESION, ATOMS-TO-ANIMALS: THE IMMUNE KEYWDS 4 FUNCTION NETWORK, IFN EXPDTA X-RAY DIFFRACTION AUTHOR U.A.RAMAGOPAL,D.SAMANTA,S.G.NATHENSON,S.C.ALMO,NEW YORK STRUCTURAL AUTHOR 2 GENOMICS RESEARCH CONSORTIUM (NYSGRC),ATOMS-TO-ANIMALS: THE IMMUNE AUTHOR 3 FUNCTION NETWORK (IFN) REVDAT 3 20-SEP-23 4HZA 1 SEQADV REVDAT 2 06-FEB-13 4HZA 1 AUTHOR REVDAT 1 30-JAN-13 4HZA 0 JRNL AUTH U.A.RAMAGOPAL,D.SAMANTA,S.G.NATHENSON,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF THE IMMUNOGLOBULIN VARIABLE DOMAIN OF JRNL TITL 2 NECTIN-2 IN MONOCLINIC FORM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.4 REMARK 3 NUMBER OF REFLECTIONS : 22736 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1140 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 778 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 42.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE SET COUNT : 39 REMARK 3 BIN FREE R VALUE : 0.3460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1906 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 119 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.38000 REMARK 3 B22 (A**2) : -0.17000 REMARK 3 B33 (A**2) : 0.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.26000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.136 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.128 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.950 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2077 ; 0.024 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2855 ; 2.087 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 270 ; 7.326 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;37.916 ;23.690 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 325 ;15.829 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;21.616 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 315 ; 0.158 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1631 ; 0.012 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1322 ; 1.507 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2164 ; 2.687 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 755 ; 3.951 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 691 ; 6.570 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 31 A 158 REMARK 3 ORIGIN FOR THE GROUP (A): -3.1460 0.0250 13.6810 REMARK 3 T TENSOR REMARK 3 T11: 0.0033 T22: 0.0415 REMARK 3 T33: 0.0545 T12: 0.0042 REMARK 3 T13: 0.0033 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.3163 L22: 1.0927 REMARK 3 L33: 0.7632 L12: -0.2071 REMARK 3 L13: 0.1203 L23: 0.5600 REMARK 3 S TENSOR REMARK 3 S11: 0.0458 S12: -0.0188 S13: 0.0129 REMARK 3 S21: -0.0644 S22: -0.0165 S23: 0.0079 REMARK 3 S31: 0.0056 S32: -0.0524 S33: -0.0293 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 31 B 158 REMARK 3 ORIGIN FOR THE GROUP (A): 16.8660 -11.4660 12.5000 REMARK 3 T TENSOR REMARK 3 T11: 0.0227 T22: 0.0164 REMARK 3 T33: 0.0682 T12: -0.0038 REMARK 3 T13: -0.0005 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 2.9243 L22: 0.1949 REMARK 3 L33: 0.4821 L12: -0.2712 REMARK 3 L13: 0.5315 L23: -0.0599 REMARK 3 S TENSOR REMARK 3 S11: 0.0926 S12: 0.0016 S13: -0.0500 REMARK 3 S21: -0.0178 S22: -0.0208 S23: 0.0113 REMARK 3 S31: 0.0493 S32: 0.0228 S33: -0.0718 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4HZA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000076106. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25886 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : 0.04500 REMARK 200 FOR THE DATA SET : 22.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.52500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3RON REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 0.1M BIS-TRIS PH 5.5, 25% REMARK 280 PEG 4K, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.63050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 112 REMARK 465 GLY A 113 REMARK 465 GLN A 114 REMARK 465 ASP A 115 REMARK 465 THR B 112 REMARK 465 GLY B 113 REMARK 465 GLN B 114 REMARK 465 ASP B 115 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 133 CG GLU B 133 CD 0.102 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 43 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3RON RELATED DB: PDB REMARK 900 RELATED ID: NYSGRC-005598 RELATED DB: TARGETTRACK DBREF 4HZA A 32 158 UNP Q92692 PVRL2_HUMAN 32 158 DBREF 4HZA B 32 158 UNP Q92692 PVRL2_HUMAN 32 158 SEQADV 4HZA MET A 31 UNP Q92692 INITIATING METHIONINE SEQADV 4HZA MET B 31 UNP Q92692 INITIATING METHIONINE SEQRES 1 A 128 MET GLN ASP VAL ARG VAL GLN VAL LEU PRO GLU VAL ARG SEQRES 2 A 128 GLY GLN LEU GLY GLY THR VAL GLU LEU PRO CYS HIS LEU SEQRES 3 A 128 LEU PRO PRO VAL PRO GLY LEU TYR ILE SER LEU VAL THR SEQRES 4 A 128 TRP GLN ARG PRO ASP ALA PRO ALA ASN HIS GLN ASN VAL SEQRES 5 A 128 ALA ALA PHE HIS PRO LYS MET GLY PRO SER PHE PRO SER SEQRES 6 A 128 PRO LYS PRO GLY SER GLU ARG LEU SER PHE VAL SER ALA SEQRES 7 A 128 LYS GLN SER THR GLY GLN ASP THR GLU ALA GLU LEU GLN SEQRES 8 A 128 ASP ALA THR LEU ALA LEU HIS GLY LEU THR VAL GLU ASP SEQRES 9 A 128 GLU GLY ASN TYR THR CYS GLU PHE ALA THR PHE PRO LYS SEQRES 10 A 128 GLY SER VAL ARG GLY MET THR TRP LEU ARG VAL SEQRES 1 B 128 MET GLN ASP VAL ARG VAL GLN VAL LEU PRO GLU VAL ARG SEQRES 2 B 128 GLY GLN LEU GLY GLY THR VAL GLU LEU PRO CYS HIS LEU SEQRES 3 B 128 LEU PRO PRO VAL PRO GLY LEU TYR ILE SER LEU VAL THR SEQRES 4 B 128 TRP GLN ARG PRO ASP ALA PRO ALA ASN HIS GLN ASN VAL SEQRES 5 B 128 ALA ALA PHE HIS PRO LYS MET GLY PRO SER PHE PRO SER SEQRES 6 B 128 PRO LYS PRO GLY SER GLU ARG LEU SER PHE VAL SER ALA SEQRES 7 B 128 LYS GLN SER THR GLY GLN ASP THR GLU ALA GLU LEU GLN SEQRES 8 B 128 ASP ALA THR LEU ALA LEU HIS GLY LEU THR VAL GLU ASP SEQRES 9 B 128 GLU GLY ASN TYR THR CYS GLU PHE ALA THR PHE PRO LYS SEQRES 10 B 128 GLY SER VAL ARG GLY MET THR TRP LEU ARG VAL FORMUL 3 HOH *119(H2 O) HELIX 1 1 PRO A 76 HIS A 79 5 4 HELIX 2 2 GLY A 99 GLU A 101 5 3 HELIX 3 3 THR A 131 GLU A 135 5 5 HELIX 4 4 THR B 131 GLU B 135 5 5 SHEET 1 A 2 ARG A 35 VAL A 38 0 SHEET 2 A 2 CYS A 54 LEU A 57 -1 O HIS A 55 N GLN A 37 SHEET 1 B 6 GLU A 41 ARG A 43 0 SHEET 2 B 6 GLY A 148 ARG A 157 1 O TRP A 155 N VAL A 42 SHEET 3 B 6 GLY A 136 PHE A 145 -1 N TYR A 138 O THR A 154 SHEET 4 B 6 TYR A 64 GLN A 71 -1 N LEU A 67 O ALA A 143 SHEET 5 B 6 ASN A 81 HIS A 86 -1 O PHE A 85 N VAL A 68 SHEET 6 B 6 GLY A 90 SER A 92 -1 O GLY A 90 N HIS A 86 SHEET 1 C 3 VAL A 50 LEU A 52 0 SHEET 2 C 3 LEU A 125 LEU A 127 -1 O LEU A 125 N LEU A 52 SHEET 3 C 3 LEU A 103 PHE A 105 -1 N SER A 104 O ALA A 126 SHEET 1 D 2 ARG B 35 VAL B 38 0 SHEET 2 D 2 CYS B 54 LEU B 57 -1 O HIS B 55 N GLN B 37 SHEET 1 E 6 GLU B 41 ARG B 43 0 SHEET 2 E 6 GLY B 148 ARG B 157 1 O ARG B 157 N VAL B 42 SHEET 3 E 6 GLY B 136 PHE B 145 -1 N TYR B 138 O THR B 154 SHEET 4 E 6 TYR B 64 GLN B 71 -1 N THR B 69 O GLU B 141 SHEET 5 E 6 ASN B 81 HIS B 86 -1 O ALA B 83 N TRP B 70 SHEET 6 E 6 GLY B 90 SER B 92 -1 O SER B 92 N ALA B 84 SHEET 1 F 3 VAL B 50 LEU B 52 0 SHEET 2 F 3 LEU B 125 LEU B 127 -1 O LEU B 125 N LEU B 52 SHEET 3 F 3 LEU B 103 PHE B 105 -1 N SER B 104 O ALA B 126 SSBOND 1 CYS A 54 CYS A 140 1555 1555 2.07 SSBOND 2 CYS B 54 CYS B 140 1555 1555 2.03 CISPEP 1 LEU A 57 PRO A 58 0 -5.94 CISPEP 2 LYS A 97 PRO A 98 0 9.49 CISPEP 3 PHE A 145 PRO A 146 0 10.07 CISPEP 4 LEU B 57 PRO B 58 0 -7.81 CISPEP 5 LYS B 97 PRO B 98 0 -9.28 CISPEP 6 PHE B 145 PRO B 146 0 8.19 CRYST1 51.907 49.261 51.867 90.00 116.98 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019265 0.000000 0.009809 0.00000 SCALE2 0.000000 0.020300 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021635 0.00000