HEADER HYDROLASE 15-NOV-12 4HZV TITLE THE CRYSTAL STRUCTURE OF INFLUENZA A NEURAMINIDASE N3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEURAMINIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 83-469; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 489926; SOURCE 4 STRAIN: 2006(H2N3); SOURCE 5 GENE: NA; SOURCE 6 EXPRESSION_SYSTEM_CELL: HI5; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS NEURAMINIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Q.LI,J.QI,C.J.VAVRICKA,G.F.GAO REVDAT 3 08-NOV-23 4HZV 1 HETSYN REVDAT 2 29-JUL-20 4HZV 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE ATOM REVDAT 1 06-NOV-13 4HZV 0 JRNL AUTH Q.LI,J.QI,Y.WU,H.KIYOTA,K.TANAKA,Y.SUHARA,H.OHRUI,Y.SUZUKI, JRNL AUTH 2 C.J.VAVRICKA,G.F.GAO JRNL TITL FUNCTIONAL AND STRUCTURAL ANALYSIS OF INFLUENZA VIRUS JRNL TITL 2 NEURAMINIDASE N3 OFFERS FURTHER INSIGHT INTO THE MECHANISMS JRNL TITL 3 OF OSELTAMIVIR RESISTANCE. JRNL REF J.VIROL. V. 87 10016 2013 JRNL REFN ISSN 0022-538X JRNL PMID 23824808 JRNL DOI 10.1128/JVI.01129-13 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.120 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 32203 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.149 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1632 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.5715 - 4.1193 0.99 2645 161 0.1345 0.1527 REMARK 3 2 4.1193 - 3.2705 0.98 2575 127 0.1325 0.1922 REMARK 3 3 3.2705 - 2.8574 0.98 2592 128 0.1550 0.1664 REMARK 3 4 2.8574 - 2.5962 0.99 2587 134 0.1569 0.1966 REMARK 3 5 2.5962 - 2.4102 0.99 2565 126 0.1569 0.2266 REMARK 3 6 2.4102 - 2.2681 0.99 2562 156 0.1489 0.1937 REMARK 3 7 2.2681 - 2.1546 0.99 2574 144 0.1410 0.1889 REMARK 3 8 2.1546 - 2.0608 0.99 2558 132 0.1428 0.2081 REMARK 3 9 2.0608 - 1.9815 0.97 2544 135 0.1434 0.1581 REMARK 3 10 1.9815 - 1.9131 0.97 2524 138 0.1539 0.1889 REMARK 3 11 1.9131 - 1.8533 0.94 2418 146 0.1595 0.2207 REMARK 3 12 1.8533 - 1.8003 0.92 2427 105 0.1663 0.1985 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 40.12 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.48430 REMARK 3 B22 (A**2) : -7.48430 REMARK 3 B33 (A**2) : 14.96870 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3232 REMARK 3 ANGLE : 0.979 4377 REMARK 3 CHIRALITY : 0.069 471 REMARK 3 PLANARITY : 0.004 559 REMARK 3 DIHEDRAL : 22.748 1188 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 27.5350 0.4909 -26.8875 REMARK 3 T TENSOR REMARK 3 T11: 0.1311 T22: 0.1744 REMARK 3 T33: 0.1734 T12: -0.0009 REMARK 3 T13: 0.0201 T23: -0.0592 REMARK 3 L TENSOR REMARK 3 L11: 0.3589 L22: 0.4823 REMARK 3 L33: 0.1609 L12: 0.0904 REMARK 3 L13: 0.0299 L23: -0.0364 REMARK 3 S TENSOR REMARK 3 S11: 0.0352 S12: 0.0259 S13: -0.0137 REMARK 3 S21: -0.0101 S22: 0.0354 S23: -0.2549 REMARK 3 S31: -0.0049 S32: 0.0655 S33: 0.0008 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HZV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000076127. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32203 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2BAT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20MM TRIS, PH 8.0, 50MM NACL, 0.1M BIS REMARK 280 -TRIS PROPANE (PH 9.0), 10% V/V JEFFAMINE ED-2001 (PH 7.0), REMARK 280 VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 53.07200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.07200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.00150 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 53.07200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.07200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.00150 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 53.07200 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 53.07200 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 32.00150 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 53.07200 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 53.07200 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 32.00150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 24040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A 508 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 673 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 687 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 866 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 100 -86.53 -111.34 REMARK 500 ASP A 125 -157.84 -109.48 REMARK 500 ASP A 200 35.29 -149.59 REMARK 500 THR A 225 -159.94 -141.35 REMARK 500 LYS A 272A -57.30 -125.94 REMARK 500 ILE A 284 -68.41 68.69 REMARK 500 CYS A 291 -161.05 -123.56 REMARK 500 ASN A 306 -166.04 -115.88 REMARK 500 SER A 319 125.41 -37.48 REMARK 500 SER A 332 -150.89 -116.41 REMARK 500 PRO A 347 -98.06 -79.24 REMARK 500 SER A 404 -132.68 -115.39 REMARK 500 LYS A 415 -122.17 70.70 REMARK 500 ASN A 433 -7.49 80.56 REMARK 500 ASP A 450 41.18 -86.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 507 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 293 O REMARK 620 2 GLY A 297 O 81.4 REMARK 620 3 ASP A 324 OD2 84.6 84.6 REMARK 620 4 GLY A 345 O 99.5 89.3 172.1 REMARK 620 5 PRO A 347 O 94.7 165.4 109.1 77.5 REMARK 620 6 HOH A 640 O 177.4 100.8 94.4 81.8 83.4 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HZW RELATED DB: PDB REMARK 900 RELATED ID: 4HZX RELATED DB: PDB REMARK 900 RELATED ID: 4HZY RELATED DB: PDB REMARK 900 RELATED ID: 4HZZ RELATED DB: PDB REMARK 900 RELATED ID: 4I00 RELATED DB: PDB DBREF 4HZV A 83 469 UNP A9YN63 A9YN63_9INFA 83 469 SEQADV 4HZV PHE A 82 UNP A9YN63 EXPRESSION TAG SEQRES 1 A 388 PHE ARG PRO PHE LYS SER PRO LEU PRO LEU CYS PRO PHE SEQRES 2 A 388 ARG GLY PHE PHE PRO PHE HIS LYS ASP ASN ALA ILE ARG SEQRES 3 A 388 LEU GLY GLU ASN LYS ASP VAL ILE VAL THR ARG GLU PRO SEQRES 4 A 388 TYR VAL SER CYS ASP ASN ASP ASN CYS TRP SER PHE ALA SEQRES 5 A 388 LEU ALA GLN GLY ALA LEU LEU GLY THR LYS HIS SER ASN SEQRES 6 A 388 GLY THR ILE LYS ASP ARG THR PRO TYR ARG SER LEU ILE SEQRES 7 A 388 ARG PHE PRO ILE GLY THR ALA PRO VAL LEU GLY ASN TYR SEQRES 8 A 388 LYS GLU ILE CYS ILE ALA TRP SER SER SER SER CYS PHE SEQRES 9 A 388 ASP GLY LYS GLU TRP MET HIS VAL CYS MET THR GLY ASN SEQRES 10 A 388 ASP ASN ASP ALA SER ALA GLN ILE ILE TYR GLY GLY ARG SEQRES 11 A 388 MET THR ASP SER ILE LYS SER TRP ARG LYS ASP ILE LEU SEQRES 12 A 388 ARG THR GLN GLU SER GLU CYS GLN CYS ILE ASP GLY THR SEQRES 13 A 388 CYS VAL VAL ALA VAL THR ASP GLY PRO ALA ALA ASN SER SEQRES 14 A 388 ALA ASP TYR ARG VAL TYR TRP ILE ARG GLU GLY LYS ILE SEQRES 15 A 388 ILE LYS TYR GLU ASN VAL PRO LYS THR LYS ILE GLN HIS SEQRES 16 A 388 LEU GLU GLU CYS SER CYS TYR VAL ASP ILE ASP VAL TYR SEQRES 17 A 388 CYS ILE CYS ARG ASP ASN TRP LYS GLY SER ASN ARG PRO SEQRES 18 A 388 TRP MET ARG ILE ASN ASN GLU THR ILE LEU GLU THR GLY SEQRES 19 A 388 TYR VAL CYS SER LYS PHE HIS SER ASP THR PRO ARG PRO SEQRES 20 A 388 ALA ASP PRO SER THR MET SER CYS ASP SER PRO SER ASN SEQRES 21 A 388 VAL ASN GLY GLY PRO GLY VAL LYS GLY PHE GLY PHE LYS SEQRES 22 A 388 ALA GLY ASP ASP VAL TRP LEU GLY ARG THR VAL SER THR SEQRES 23 A 388 SER GLY ARG SER GLY PHE GLU ILE ILE LYS VAL THR GLU SEQRES 24 A 388 GLY TRP ILE ASN SER PRO ASN HIS VAL LYS SER ILE THR SEQRES 25 A 388 GLN THR LEU VAL SER ASN ASN ASP TRP SER GLY TYR SER SEQRES 26 A 388 GLY SER PHE ILE VAL LYS ALA LYS ASP CYS PHE GLN PRO SEQRES 27 A 388 CYS PHE TYR VAL GLU LEU ILE ARG GLY ARG PRO ASN LYS SEQRES 28 A 388 ASN ASP ASP VAL SER TRP THR SER ASN SER ILE VAL THR SEQRES 29 A 388 PHE CYS GLY LEU ASP ASN GLU PRO GLY SER GLY ASN TRP SEQRES 30 A 388 PRO ASP GLY SER ASN ILE GLY PHE MET PRO LYS MODRES 4HZV ASN A 146 ASN GLYCOSYLATION SITE MODRES 4HZV ASN A 307 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET FUC B 3 10 HET NAG C 1 14 HET NAG C 2 14 HET FUC C 3 10 HET CA A 507 1 HET CA A 508 1 HET GOL A 509 6 HET GOL A 510 6 HET GOL A 511 6 HET GOL A 512 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAG 4(C8 H15 N O6) FORMUL 2 FUC 2(C6 H12 O5) FORMUL 4 CA 2(CA 2+) FORMUL 6 GOL 4(C3 H8 O3) FORMUL 10 HOH *329(H2 O) HELIX 1 1 ASN A 104 GLY A 109 1 6 HELIX 2 2 THR A 142 ASN A 146 5 5 HELIX 3 3 ASN A 463 MET A 467 5 5 SHEET 1 A 4 GLY A 96 LYS A 102 0 SHEET 2 A 4 THR A 439 LEU A 449 -1 O THR A 445 N PHE A 100 SHEET 3 A 4 CYS A 417 GLY A 429 -1 N PRO A 420 O GLY A 448 SHEET 4 A 4 SER A 407 ALA A 414 -1 N ALA A 414 O CYS A 417 SHEET 1 B 4 ILE A 115 CYS A 124 0 SHEET 2 B 4 CYS A 129 LEU A 139 -1 O PHE A 132 N TYR A 121 SHEET 3 B 4 SER A 157 PRO A 162 -1 O ILE A 159 N ALA A 133 SHEET 4 B 4 LYS A 172 ILE A 176 -1 O ILE A 174 N LEU A 158 SHEET 1 C 4 SER A 179 PHE A 184 0 SHEET 2 C 4 TRP A 189 THR A 195 -1 O MET A 190 N CYS A 183 SHEET 3 C 4 SER A 202 TYR A 207 -1 O GLN A 204 N CYS A 193 SHEET 4 C 4 ARG A 210 LYS A 216 -1 O ARG A 210 N TYR A 207 SHEET 1 D 3 ARG A 224 THR A 225 0 SHEET 2 D 3 THR A 236 ASP A 243 -1 O THR A 242 N ARG A 224 SHEET 3 D 3 GLN A 231 ILE A 233 -1 N GLN A 231 O VAL A 238 SHEET 1 E 4 ARG A 224 THR A 225 0 SHEET 2 E 4 THR A 236 ASP A 243 -1 O THR A 242 N ARG A 224 SHEET 3 E 4 ASP A 251 ARG A 258 -1 O ARG A 253 N VAL A 241 SHEET 4 E 4 LYS A 261 ASN A 267 -1 O ILE A 263 N TRP A 256 SHEET 1 F 4 GLU A 276 VAL A 282 0 SHEET 2 F 4 VAL A 287 ARG A 292 -1 O ILE A 290 N SER A 279 SHEET 3 F 4 PRO A 301 ILE A 305 -1 O ILE A 305 N VAL A 287 SHEET 4 F 4 ILE A 311 TYR A 316 -1 O GLY A 315 N TRP A 302 SHEET 1 G 4 GLY A 353 ALA A 356 0 SHEET 2 G 4 ASP A 359 ARG A 364 -1 O TRP A 361 N PHE A 354 SHEET 3 G 4 SER A 372 THR A 380 -1 O VAL A 379 N VAL A 360 SHEET 4 G 4 VAL A 390 TRP A 403 -1 O VAL A 398 N PHE A 374 SSBOND 1 CYS A 92 CYS A 417 1555 1555 2.03 SSBOND 2 CYS A 124 CYS A 129 1555 1555 2.04 SSBOND 3 CYS A 175 CYS A 193 1555 1555 2.03 SSBOND 4 CYS A 183 CYS A 230 1555 1555 2.03 SSBOND 5 CYS A 232 CYS A 237 1555 1555 2.04 SSBOND 6 CYS A 278 CYS A 291 1555 1555 2.04 SSBOND 7 CYS A 280 CYS A 289 1555 1555 2.04 SSBOND 8 CYS A 318 CYS A 337 1555 1555 2.05 SSBOND 9 CYS A 421 CYS A 447 1555 1555 2.05 LINK ND2 ASN A 146 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 307 C1 NAG C 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O6 NAG B 1 C1 FUC B 3 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O6 NAG C 1 C1 FUC C 3 1555 1555 1.44 LINK O ASP A 293 CA CA A 507 1555 1555 2.39 LINK O GLY A 297 CA CA A 507 1555 1555 2.63 LINK OD2 ASP A 324 CA CA A 507 1555 1555 2.54 LINK O GLY A 345 CA CA A 507 1555 1555 2.44 LINK O PRO A 347 CA CA A 507 1555 1555 2.54 LINK CA CA A 507 O HOH A 640 1555 1555 2.62 LINK CA CA A 508 O HOH A 684 1555 1555 2.90 CISPEP 1 THR A 325 PRO A 326 0 7.19 CISPEP 2 ASP A 330 PRO A 331 0 -4.50 CISPEP 3 GLY A 346 PRO A 347 0 -3.33 CISPEP 4 ARG A 430 PRO A 431 0 2.87 CRYST1 106.144 106.144 64.003 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009421 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009421 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015624 0.00000