data_4I0K # _entry.id 4I0K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4I0K pdb_00004i0k 10.2210/pdb4i0k/pdb RCSB RCSB076152 ? ? WWPDB D_1000076152 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id NYSGRC-005729 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4I0K _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-11-16 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vigdorovich, V.' 1 'Ramagopal, U.' 2 'Bonanno, J.B.' 3 'Toro, R.' 4 'Nathenson, S.G.' 5 'Almo, S.C.' 6 'New York Structural Genomics Research Consortium (NYSGRC)' 7 'Atoms-to-Animals: The Immune Function Network (IFN)' 8 # _citation.id primary _citation.title 'Structure and T cell inhibition properties of B7 family member, B7-H3.' _citation.journal_abbrev Structure _citation.journal_volume 21 _citation.page_first 707 _citation.page_last 717 _citation.year 2013 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23583036 _citation.pdbx_database_id_DOI 10.1016/j.str.2013.03.003 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vigdorovich, V.' 1 ? primary 'Ramagopal, U.A.' 2 ? primary 'Lazar-Molnar, E.' 3 ? primary 'Sylvestre, E.' 4 ? primary 'Lee, J.S.' 5 ? primary 'Hofmeyer, K.A.' 6 ? primary 'Zang, X.' 7 ? primary 'Nathenson, S.G.' 8 ? primary 'Almo, S.C.' 9 ? # _cell.entry_id 4I0K _cell.length_a 100.920 _cell.length_b 100.920 _cell.length_c 188.180 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4I0K _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CD276 antigen' 24264.998 1 ? ? 'extracellular domain' ? 2 branched man ;alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 748.682 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 5 water nat water 18.015 5 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'B7 homolog 3, B7-H3, Costimulatory molecule' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SEDPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVR VTDEGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTS QMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTFPPETGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;SEDPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVR VTDEGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTS QMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTFPPETGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGRC-005729 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLU n 1 3 ASP n 1 4 PRO n 1 5 VAL n 1 6 VAL n 1 7 ALA n 1 8 LEU n 1 9 VAL n 1 10 ASP n 1 11 THR n 1 12 ASP n 1 13 ALA n 1 14 THR n 1 15 LEU n 1 16 ARG n 1 17 CYS n 1 18 SER n 1 19 PHE n 1 20 SER n 1 21 PRO n 1 22 GLU n 1 23 PRO n 1 24 GLY n 1 25 PHE n 1 26 SER n 1 27 LEU n 1 28 ALA n 1 29 GLN n 1 30 LEU n 1 31 ASN n 1 32 LEU n 1 33 ILE n 1 34 TRP n 1 35 GLN n 1 36 LEU n 1 37 THR n 1 38 ASP n 1 39 THR n 1 40 LYS n 1 41 GLN n 1 42 LEU n 1 43 VAL n 1 44 HIS n 1 45 SER n 1 46 PHE n 1 47 THR n 1 48 GLU n 1 49 GLY n 1 50 ARG n 1 51 ASP n 1 52 GLN n 1 53 GLY n 1 54 SER n 1 55 ALA n 1 56 TYR n 1 57 SER n 1 58 ASN n 1 59 ARG n 1 60 THR n 1 61 ALA n 1 62 LEU n 1 63 PHE n 1 64 PRO n 1 65 ASP n 1 66 LEU n 1 67 LEU n 1 68 VAL n 1 69 GLN n 1 70 GLY n 1 71 ASN n 1 72 ALA n 1 73 SER n 1 74 LEU n 1 75 ARG n 1 76 LEU n 1 77 GLN n 1 78 ARG n 1 79 VAL n 1 80 ARG n 1 81 VAL n 1 82 THR n 1 83 ASP n 1 84 GLU n 1 85 GLY n 1 86 SER n 1 87 TYR n 1 88 THR n 1 89 CYS n 1 90 PHE n 1 91 VAL n 1 92 SER n 1 93 ILE n 1 94 GLN n 1 95 ASP n 1 96 PHE n 1 97 ASP n 1 98 SER n 1 99 ALA n 1 100 ALA n 1 101 VAL n 1 102 SER n 1 103 LEU n 1 104 GLN n 1 105 VAL n 1 106 ALA n 1 107 ALA n 1 108 PRO n 1 109 TYR n 1 110 SER n 1 111 LYS n 1 112 PRO n 1 113 SER n 1 114 MET n 1 115 THR n 1 116 LEU n 1 117 GLU n 1 118 PRO n 1 119 ASN n 1 120 LYS n 1 121 ASP n 1 122 LEU n 1 123 ARG n 1 124 PRO n 1 125 GLY n 1 126 ASN n 1 127 MET n 1 128 VAL n 1 129 THR n 1 130 ILE n 1 131 THR n 1 132 CYS n 1 133 SER n 1 134 SER n 1 135 TYR n 1 136 GLN n 1 137 GLY n 1 138 TYR n 1 139 PRO n 1 140 GLU n 1 141 ALA n 1 142 GLU n 1 143 VAL n 1 144 PHE n 1 145 TRP n 1 146 LYS n 1 147 ASP n 1 148 GLY n 1 149 GLN n 1 150 GLY n 1 151 VAL n 1 152 PRO n 1 153 LEU n 1 154 THR n 1 155 GLY n 1 156 ASN n 1 157 VAL n 1 158 THR n 1 159 THR n 1 160 SER n 1 161 GLN n 1 162 MET n 1 163 ALA n 1 164 ASN n 1 165 GLU n 1 166 ARG n 1 167 GLY n 1 168 LEU n 1 169 PHE n 1 170 ASP n 1 171 VAL n 1 172 HIS n 1 173 SER n 1 174 VAL n 1 175 LEU n 1 176 ARG n 1 177 VAL n 1 178 VAL n 1 179 LEU n 1 180 GLY n 1 181 ALA n 1 182 ASN n 1 183 GLY n 1 184 THR n 1 185 TYR n 1 186 SER n 1 187 CYS n 1 188 LEU n 1 189 VAL n 1 190 ARG n 1 191 ASN n 1 192 PRO n 1 193 VAL n 1 194 LEU n 1 195 GLN n 1 196 GLN n 1 197 ASP n 1 198 ALA n 1 199 HIS n 1 200 GLY n 1 201 SER n 1 202 VAL n 1 203 THR n 1 204 ILE n 1 205 THR n 1 206 GLY n 1 207 GLN n 1 208 PRO n 1 209 LEU n 1 210 THR n 1 211 PHE n 1 212 PRO n 1 213 PRO n 1 214 GLU n 1 215 THR n 1 216 GLY n 1 217 HIS n 1 218 HIS n 1 219 HIS n 1 220 HIS n 1 221 HIS n 1 222 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'B7-H3, B7h3, Cd276' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7227 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Schneider 2 cell line' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMT-BiP-His _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CD276_MOUSE _struct_ref.pdbx_db_accession Q8VE98 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SEDPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVR VTDEGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTS QMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTFPPE ; _struct_ref.pdbx_align_begin 34 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4I0K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 214 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8VE98 _struct_ref_seq.db_align_beg 34 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 247 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 34 _struct_ref_seq.pdbx_auth_seq_align_end 247 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4I0K THR A 215 ? UNP Q8VE98 ? ? 'expression tag' 248 1 1 4I0K GLY A 216 ? UNP Q8VE98 ? ? 'expression tag' 249 2 1 4I0K HIS A 217 ? UNP Q8VE98 ? ? 'expression tag' 250 3 1 4I0K HIS A 218 ? UNP Q8VE98 ? ? 'expression tag' 251 4 1 4I0K HIS A 219 ? UNP Q8VE98 ? ? 'expression tag' 252 5 1 4I0K HIS A 220 ? UNP Q8VE98 ? ? 'expression tag' 253 6 1 4I0K HIS A 221 ? UNP Q8VE98 ? ? 'expression tag' 254 7 1 4I0K HIS A 222 ? UNP Q8VE98 ? ? 'expression tag' 255 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4I0K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 5.70 _exptl_crystal.density_percent_sol 78.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES, pH 7.5; 20% PEG-10000, VAPOR DIFFUSION, temperature 291K' # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'ADSC QUANTUM 315' 2009-11-19 ? 2 ? ? ? ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'Si crystal' 'SINGLE WAVELENGTH' x-ray 2 1 M ? ? x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9789 _diffrn_radiation_wavelength.wt 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'NSLS BEAMLINE X29A' NSLS X29A ? 0.9789 2 ? ? ? ? ? ? # _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 _reflns.entry_id 4I0K _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 87.399 _reflns.d_resolution_high 2.833 _reflns.number_obs 12250 _reflns.number_all ? _reflns.percent_possible_obs 99.700 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.117 _reflns.pdbx_netI_over_sigmaI 18.100 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 13.100 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1,2 1 2.970 3.130 100.000 0.800 0.800 1.000 13.700 ? ? ? ? ? ? 1,2 2 3.130 3.320 100.000 0.442 0.442 1.700 13.600 ? ? ? ? ? ? 1,2 3 3.320 3.550 100.000 0.277 0.277 2.700 13.400 ? ? ? ? ? ? 1,2 4 3.550 3.830 99.900 0.181 0.181 4.200 13.300 ? ? ? ? ? ? 1,2 5 3.830 4.200 99.800 0.111 0.111 6.600 13.300 ? ? ? ? ? ? 1,2 6 4.200 4.700 99.700 0.086 0.086 7.800 12.700 ? ? ? ? ? ? 1,2 7 4.700 5.420 99.600 0.085 0.085 7.400 11.900 ? ? ? ? ? ? 1,2 8 5.420 6.640 99.400 0.070 0.070 9.400 12.300 ? ? ? ? ? ? 1,2 9 6.640 9.390 99.200 0.046 0.046 12.500 13.200 ? ? ? ? ? ? 1,2 10 9.390 48.738 97.500 0.041 0.041 14.900 11.400 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4I0K _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11661 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.97 _refine.ls_percent_reflns_obs 99.50 _refine.ls_R_factor_obs 0.21712 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21548 _refine.ls_R_factor_R_free 0.24974 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 589 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.500 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.929 _refine.correlation_coeff_Fo_to_Fc_free 0.928 _refine.B_iso_mean 72.265 _refine.aniso_B[1][1] -0.02 _refine.aniso_B[2][2] -0.02 _refine.aniso_B[3][3] 0.08 _refine.aniso_B[1][2] -0.02 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 3BIS' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.361 _refine.pdbx_overall_ESU_R_Free 0.280 _refine.overall_SU_ML 0.211 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 11.178 _refine.overall_SU_R_Cruickshank_DPI 0.3660 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1513 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 74 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 1592 _refine_hist.d_res_high 2.97 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.019 ? 1638 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1492 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.742 2.003 ? 2246 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.841 3.002 ? 3415 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 8.350 5.000 ? 201 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.736 24.493 ? 69 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 21.034 15.000 ? 237 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.567 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.084 0.200 ? 274 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 1827 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 362 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.970 _refine_ls_shell.d_res_low 3.046 _refine_ls_shell.number_reflns_R_work 817 _refine_ls_shell.R_factor_R_work 0.289 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.402 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 46 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4I0K _struct.title 'Crystal structure of murine B7-H3 extracellular domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text ;IMMUNOGLOBULIN DOMAIN, GLYCOPROTEIN, IMMUNITY, ADAPTIVE IMMUNITY, Structural Genomics, Protein Structure Initiative, immunoglobulin variable like domain, immunoglobulin constant like domain, cell surface, PSI-Biology, IMMUNE SYSTEM, New York Structural Genomics Research Consortium, NYSGRC, Atoms-to-Animals: The Immune Function Network, IFN ; _struct_keywords.entry_id 4I0K # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details 'The second part of the biological assembly is generated by the two fold axis: -x, -x+y, -z-1/3' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 66 ? GLY A 70 ? LEU A 99 GLY A 103 5 ? 5 HELX_P HELX_P2 2 ARG A 80 ? GLU A 84 ? ARG A 113 GLU A 117 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 17 SG ? ? ? 1_555 A CYS 89 SG ? ? A CYS 50 A CYS 122 1_555 ? ? ? ? ? ? ? 2.093 ? ? disulf2 disulf ? ? A CYS 132 SG ? ? ? 1_555 A CYS 187 SG ? ? A CYS 165 A CYS 220 1_555 ? ? ? ? ? ? ? 2.012 ? ? covale1 covale one ? A ASN 58 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 91 A NAG 305 1_555 ? ? ? ? ? ? ? 1.466 ? N-Glycosylation covale2 covale one ? A ASN 71 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 104 B NAG 1 1_555 ? ? ? ? ? ? ? 1.415 ? N-Glycosylation covale3 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.424 ? ? covale4 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale5 covale both ? B BMA . O6 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 4 1_555 ? ? ? ? ? ? ? 1.478 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 138 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 171 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 139 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 172 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.89 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? C ? 4 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 13 ? LEU A 15 ? ALA A 46 LEU A 48 A 2 LEU A 74 ? LEU A 76 ? LEU A 107 LEU A 109 A 3 THR A 60 ? ALA A 61 ? THR A 93 ALA A 94 B 1 ARG A 50 ? SER A 54 ? ARG A 83 SER A 87 B 2 LEU A 42 ? THR A 47 ? LEU A 75 THR A 80 B 3 LEU A 30 ? LEU A 36 ? LEU A 63 LEU A 69 B 4 TYR A 87 ? ILE A 93 ? TYR A 120 ILE A 126 C 1 SER A 113 ? THR A 115 ? SER A 146 THR A 148 C 2 MET A 127 ? GLY A 137 ? MET A 160 GLY A 170 C 3 PHE A 169 ? VAL A 178 ? PHE A 202 VAL A 211 C 4 ASN A 156 ? ALA A 163 ? ASN A 189 ALA A 196 D 1 GLU A 142 ? LYS A 146 ? GLU A 175 LYS A 179 D 2 THR A 184 ? ASN A 191 ? THR A 217 ASN A 224 D 3 GLN A 196 ? THR A 203 ? GLN A 229 THR A 236 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 13 ? N ALA A 46 O LEU A 76 ? O LEU A 109 A 2 3 O ARG A 75 ? O ARG A 108 N ALA A 61 ? N ALA A 94 B 1 2 O ARG A 50 ? O ARG A 83 N THR A 47 ? N THR A 80 B 2 3 O VAL A 43 ? O VAL A 76 N TRP A 34 ? N TRP A 67 B 3 4 N ILE A 33 ? N ILE A 66 O PHE A 90 ? O PHE A 123 C 1 2 N THR A 115 ? N THR A 148 O THR A 131 ? O THR A 164 C 2 3 N CYS A 132 ? N CYS A 165 O SER A 173 ? O SER A 206 C 3 4 O VAL A 174 ? O VAL A 207 N THR A 158 ? N THR A 191 D 1 2 N GLU A 142 ? N GLU A 175 O ARG A 190 ? O ARG A 223 D 2 3 N VAL A 189 ? N VAL A 222 O ALA A 198 ? O ALA A 231 # _atom_sites.entry_id 4I0K _atom_sites.fract_transf_matrix[1][1] 0.009909 _atom_sites.fract_transf_matrix[1][2] 0.005721 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011442 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005314 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 34 ? ? ? A . n A 1 2 GLU 2 35 35 GLU GLU A . n A 1 3 ASP 3 36 36 ASP ASP A . n A 1 4 PRO 4 37 37 PRO PRO A . n A 1 5 VAL 5 38 38 VAL VAL A . n A 1 6 VAL 6 39 39 VAL VAL A . n A 1 7 ALA 7 40 40 ALA ALA A . n A 1 8 LEU 8 41 41 LEU LEU A . n A 1 9 VAL 9 42 42 VAL VAL A . n A 1 10 ASP 10 43 43 ASP ASP A . n A 1 11 THR 11 44 44 THR THR A . n A 1 12 ASP 12 45 45 ASP ASP A . n A 1 13 ALA 13 46 46 ALA ALA A . n A 1 14 THR 14 47 47 THR THR A . n A 1 15 LEU 15 48 48 LEU LEU A . n A 1 16 ARG 16 49 49 ARG ARG A . n A 1 17 CYS 17 50 50 CYS CYS A . n A 1 18 SER 18 51 51 SER SER A . n A 1 19 PHE 19 52 52 PHE PHE A . n A 1 20 SER 20 53 53 SER SER A . n A 1 21 PRO 21 54 54 PRO PRO A . n A 1 22 GLU 22 55 55 GLU GLU A . n A 1 23 PRO 23 56 56 PRO PRO A . n A 1 24 GLY 24 57 57 GLY GLY A . n A 1 25 PHE 25 58 58 PHE PHE A . n A 1 26 SER 26 59 59 SER SER A . n A 1 27 LEU 27 60 60 LEU LEU A . n A 1 28 ALA 28 61 61 ALA ALA A . n A 1 29 GLN 29 62 62 GLN GLN A . n A 1 30 LEU 30 63 63 LEU LEU A . n A 1 31 ASN 31 64 64 ASN ASN A . n A 1 32 LEU 32 65 65 LEU LEU A . n A 1 33 ILE 33 66 66 ILE ILE A . n A 1 34 TRP 34 67 67 TRP TRP A . n A 1 35 GLN 35 68 68 GLN GLN A . n A 1 36 LEU 36 69 69 LEU LEU A . n A 1 37 THR 37 70 70 THR THR A . n A 1 38 ASP 38 71 71 ASP ASP A . n A 1 39 THR 39 72 72 THR THR A . n A 1 40 LYS 40 73 73 LYS LYS A . n A 1 41 GLN 41 74 74 GLN GLN A . n A 1 42 LEU 42 75 75 LEU LEU A . n A 1 43 VAL 43 76 76 VAL VAL A . n A 1 44 HIS 44 77 77 HIS HIS A . n A 1 45 SER 45 78 78 SER SER A . n A 1 46 PHE 46 79 79 PHE PHE A . n A 1 47 THR 47 80 80 THR THR A . n A 1 48 GLU 48 81 81 GLU GLU A . n A 1 49 GLY 49 82 82 GLY GLY A . n A 1 50 ARG 50 83 83 ARG ARG A . n A 1 51 ASP 51 84 84 ASP ASP A . n A 1 52 GLN 52 85 85 GLN GLN A . n A 1 53 GLY 53 86 86 GLY GLY A . n A 1 54 SER 54 87 87 SER SER A . n A 1 55 ALA 55 88 88 ALA ALA A . n A 1 56 TYR 56 89 89 TYR TYR A . n A 1 57 SER 57 90 90 SER SER A . n A 1 58 ASN 58 91 91 ASN ASN A . n A 1 59 ARG 59 92 92 ARG ARG A . n A 1 60 THR 60 93 93 THR THR A . n A 1 61 ALA 61 94 94 ALA ALA A . n A 1 62 LEU 62 95 95 LEU LEU A . n A 1 63 PHE 63 96 96 PHE PHE A . n A 1 64 PRO 64 97 97 PRO PRO A . n A 1 65 ASP 65 98 98 ASP ASP A . n A 1 66 LEU 66 99 99 LEU LEU A . n A 1 67 LEU 67 100 100 LEU LEU A . n A 1 68 VAL 68 101 101 VAL VAL A . n A 1 69 GLN 69 102 102 GLN GLN A . n A 1 70 GLY 70 103 103 GLY GLY A . n A 1 71 ASN 71 104 104 ASN ASN A . n A 1 72 ALA 72 105 105 ALA ALA A . n A 1 73 SER 73 106 106 SER SER A . n A 1 74 LEU 74 107 107 LEU LEU A . n A 1 75 ARG 75 108 108 ARG ARG A . n A 1 76 LEU 76 109 109 LEU LEU A . n A 1 77 GLN 77 110 110 GLN GLN A . n A 1 78 ARG 78 111 111 ARG ARG A . n A 1 79 VAL 79 112 112 VAL VAL A . n A 1 80 ARG 80 113 113 ARG ARG A . n A 1 81 VAL 81 114 114 VAL VAL A . n A 1 82 THR 82 115 115 THR THR A . n A 1 83 ASP 83 116 116 ASP ASP A . n A 1 84 GLU 84 117 117 GLU GLU A . n A 1 85 GLY 85 118 118 GLY GLY A . n A 1 86 SER 86 119 119 SER SER A . n A 1 87 TYR 87 120 120 TYR TYR A . n A 1 88 THR 88 121 121 THR THR A . n A 1 89 CYS 89 122 122 CYS CYS A . n A 1 90 PHE 90 123 123 PHE PHE A . n A 1 91 VAL 91 124 124 VAL VAL A . n A 1 92 SER 92 125 125 SER SER A . n A 1 93 ILE 93 126 126 ILE ILE A . n A 1 94 GLN 94 127 127 GLN GLN A . n A 1 95 ASP 95 128 128 ASP ASP A . n A 1 96 PHE 96 129 129 PHE PHE A . n A 1 97 ASP 97 130 130 ASP ASP A . n A 1 98 SER 98 131 131 SER SER A . n A 1 99 ALA 99 132 132 ALA ALA A . n A 1 100 ALA 100 133 133 ALA ALA A . n A 1 101 VAL 101 134 134 VAL VAL A . n A 1 102 SER 102 135 135 SER SER A . n A 1 103 LEU 103 136 136 LEU LEU A . n A 1 104 GLN 104 137 137 GLN GLN A . n A 1 105 VAL 105 138 138 VAL VAL A . n A 1 106 ALA 106 139 139 ALA ALA A . n A 1 107 ALA 107 140 140 ALA ALA A . n A 1 108 PRO 108 141 141 PRO PRO A . n A 1 109 TYR 109 142 142 TYR TYR A . n A 1 110 SER 110 143 143 SER SER A . n A 1 111 LYS 111 144 144 LYS LYS A . n A 1 112 PRO 112 145 145 PRO PRO A . n A 1 113 SER 113 146 146 SER SER A . n A 1 114 MET 114 147 147 MET MET A . n A 1 115 THR 115 148 148 THR THR A . n A 1 116 LEU 116 149 149 LEU LEU A . n A 1 117 GLU 117 150 150 GLU GLU A . n A 1 118 PRO 118 151 151 PRO PRO A . n A 1 119 ASN 119 152 ? ? ? A . n A 1 120 LYS 120 153 ? ? ? A . n A 1 121 ASP 121 154 ? ? ? A . n A 1 122 LEU 122 155 ? ? ? A . n A 1 123 ARG 123 156 ? ? ? A . n A 1 124 PRO 124 157 157 PRO PRO A . n A 1 125 GLY 125 158 158 GLY GLY A . n A 1 126 ASN 126 159 159 ASN ASN A . n A 1 127 MET 127 160 160 MET MET A . n A 1 128 VAL 128 161 161 VAL VAL A . n A 1 129 THR 129 162 162 THR THR A . n A 1 130 ILE 130 163 163 ILE ILE A . n A 1 131 THR 131 164 164 THR THR A . n A 1 132 CYS 132 165 165 CYS CYS A . n A 1 133 SER 133 166 166 SER SER A . n A 1 134 SER 134 167 167 SER SER A . n A 1 135 TYR 135 168 168 TYR TYR A . n A 1 136 GLN 136 169 169 GLN GLN A . n A 1 137 GLY 137 170 170 GLY GLY A . n A 1 138 TYR 138 171 171 TYR TYR A . n A 1 139 PRO 139 172 172 PRO PRO A . n A 1 140 GLU 140 173 173 GLU GLU A . n A 1 141 ALA 141 174 174 ALA ALA A . n A 1 142 GLU 142 175 175 GLU GLU A . n A 1 143 VAL 143 176 176 VAL VAL A . n A 1 144 PHE 144 177 177 PHE PHE A . n A 1 145 TRP 145 178 178 TRP TRP A . n A 1 146 LYS 146 179 179 LYS LYS A . n A 1 147 ASP 147 180 180 ASP ASP A . n A 1 148 GLY 148 181 181 GLY GLY A . n A 1 149 GLN 149 182 182 GLN GLN A . n A 1 150 GLY 150 183 183 GLY GLY A . n A 1 151 VAL 151 184 184 VAL VAL A . n A 1 152 PRO 152 185 185 PRO PRO A . n A 1 153 LEU 153 186 186 LEU LEU A . n A 1 154 THR 154 187 187 THR THR A . n A 1 155 GLY 155 188 188 GLY GLY A . n A 1 156 ASN 156 189 189 ASN ASN A . n A 1 157 VAL 157 190 190 VAL VAL A . n A 1 158 THR 158 191 191 THR THR A . n A 1 159 THR 159 192 192 THR THR A . n A 1 160 SER 160 193 193 SER SER A . n A 1 161 GLN 161 194 194 GLN GLN A . n A 1 162 MET 162 195 195 MET MET A . n A 1 163 ALA 163 196 196 ALA ALA A . n A 1 164 ASN 164 197 197 ASN ASN A . n A 1 165 GLU 165 198 198 GLU GLU A . n A 1 166 ARG 166 199 199 ARG ARG A . n A 1 167 GLY 167 200 200 GLY GLY A . n A 1 168 LEU 168 201 201 LEU LEU A . n A 1 169 PHE 169 202 202 PHE PHE A . n A 1 170 ASP 170 203 203 ASP ASP A . n A 1 171 VAL 171 204 204 VAL VAL A . n A 1 172 HIS 172 205 205 HIS HIS A . n A 1 173 SER 173 206 206 SER SER A . n A 1 174 VAL 174 207 207 VAL VAL A . n A 1 175 LEU 175 208 208 LEU LEU A . n A 1 176 ARG 176 209 209 ARG ARG A . n A 1 177 VAL 177 210 210 VAL VAL A . n A 1 178 VAL 178 211 211 VAL VAL A . n A 1 179 LEU 179 212 212 LEU LEU A . n A 1 180 GLY 180 213 213 GLY GLY A . n A 1 181 ALA 181 214 214 ALA ALA A . n A 1 182 ASN 182 215 215 ASN ASN A . n A 1 183 GLY 183 216 216 GLY GLY A . n A 1 184 THR 184 217 217 THR THR A . n A 1 185 TYR 185 218 218 TYR TYR A . n A 1 186 SER 186 219 219 SER SER A . n A 1 187 CYS 187 220 220 CYS CYS A . n A 1 188 LEU 188 221 221 LEU LEU A . n A 1 189 VAL 189 222 222 VAL VAL A . n A 1 190 ARG 190 223 223 ARG ARG A . n A 1 191 ASN 191 224 224 ASN ASN A . n A 1 192 PRO 192 225 225 PRO PRO A . n A 1 193 VAL 193 226 226 VAL VAL A . n A 1 194 LEU 194 227 227 LEU LEU A . n A 1 195 GLN 195 228 228 GLN GLN A . n A 1 196 GLN 196 229 229 GLN GLN A . n A 1 197 ASP 197 230 230 ASP ASP A . n A 1 198 ALA 198 231 231 ALA ALA A . n A 1 199 HIS 199 232 232 HIS HIS A . n A 1 200 GLY 200 233 233 GLY GLY A . n A 1 201 SER 201 234 234 SER SER A . n A 1 202 VAL 202 235 235 VAL VAL A . n A 1 203 THR 203 236 236 THR THR A . n A 1 204 ILE 204 237 237 ILE ILE A . n A 1 205 THR 205 238 238 THR THR A . n A 1 206 GLY 206 239 239 GLY GLY A . n A 1 207 GLN 207 240 ? ? ? A . n A 1 208 PRO 208 241 ? ? ? A . n A 1 209 LEU 209 242 ? ? ? A . n A 1 210 THR 210 243 ? ? ? A . n A 1 211 PHE 211 244 ? ? ? A . n A 1 212 PRO 212 245 ? ? ? A . n A 1 213 PRO 213 246 ? ? ? A . n A 1 214 GLU 214 247 ? ? ? A . n A 1 215 THR 215 248 ? ? ? A . n A 1 216 GLY 216 249 ? ? ? A . n A 1 217 HIS 217 250 ? ? ? A . n A 1 218 HIS 218 251 ? ? ? A . n A 1 219 HIS 219 252 ? ? ? A . n A 1 220 HIS 220 253 ? ? ? A . n A 1 221 HIS 221 254 ? ? ? A . n A 1 222 HIS 222 255 ? ? ? A . n # loop_ _pdbx_SG_project.project_name _pdbx_SG_project.full_name_of_center _pdbx_SG_project.initial_of_center _pdbx_SG_project.id PSI:Biology 'New York Structural Genomics Research Consortium' NYSGRC 1 PSI:Biology 'Atoms-to-Animals: The Immune Function Network' IFN 2 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 305 1 NAG NAG A . D 4 SO4 1 306 1 SO4 SO4 A . E 4 SO4 1 307 2 SO4 SO4 A . F 5 HOH 1 401 2 HOH HOH A . F 5 HOH 2 402 12 HOH HOH A . F 5 HOH 3 403 24 HOH HOH A . F 5 HOH 4 404 25 HOH HOH A . F 5 HOH 5 405 26 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 71 A ASN 104 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 58 A ASN 91 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7580 ? 1 MORE -42 ? 1 'SSA (A^2)' 21800 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 9_554 -x,-x+y,-z-1/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -62.7266666667 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 404 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-05 2 'Structure model' 1 1 2016-11-16 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-09-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Structure summary' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Database references' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' pdbx_branch_scheme 5 3 'Structure model' pdbx_chem_comp_identifier 6 3 'Structure model' pdbx_entity_branch 7 3 'Structure model' pdbx_entity_branch_descriptor 8 3 'Structure model' pdbx_entity_branch_link 9 3 'Structure model' pdbx_entity_branch_list 10 3 'Structure model' pdbx_entity_nonpoly 11 3 'Structure model' pdbx_nonpoly_scheme 12 3 'Structure model' pdbx_struct_assembly_gen 13 3 'Structure model' pdbx_struct_special_symmetry 14 3 'Structure model' pdbx_validate_close_contact 15 3 'Structure model' struct_asym 16 3 'Structure model' struct_conn 17 3 'Structure model' struct_ref_seq_dif 18 3 'Structure model' struct_site 19 3 'Structure model' struct_site_gen 20 4 'Structure model' chem_comp 21 4 'Structure model' chem_comp_atom 22 4 'Structure model' chem_comp_bond 23 4 'Structure model' database_2 24 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.auth_asym_id' 2 3 'Structure model' '_atom_site.auth_seq_id' 3 3 'Structure model' '_atom_site.label_asym_id' 4 3 'Structure model' '_atom_site.label_entity_id' 5 3 'Structure model' '_chem_comp.name' 6 3 'Structure model' '_chem_comp.type' 7 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 8 3 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 9 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 10 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 11 3 'Structure model' '_struct_conn.pdbx_dist_value' 12 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 13 3 'Structure model' '_struct_conn.pdbx_role' 14 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 15 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 16 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 18 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 21 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 22 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 23 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 27 3 'Structure model' '_struct_ref_seq_dif.details' 28 4 'Structure model' '_chem_comp.pdbx_synonyms' 29 4 'Structure model' '_database_2.pdbx_DOI' 30 4 'Structure model' '_database_2.pdbx_database_accession' # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA 3.3.20 2011/05/18 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 CBASS . ? ? ? ? 'data collection' ? ? ? 5 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 6 BALBES . ? ? ? ? phasing ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 ND2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 104 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O5 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 NAG _pdbx_validate_close_contact.auth_seq_id_2 1 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 96 ? ? -112.71 74.62 2 1 GLN A 169 ? ? 70.30 55.05 3 1 PRO A 172 ? ? -78.34 -165.72 4 1 ASP A 180 ? ? -76.62 -168.85 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLY _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 57 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PHE _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 58 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -145.30 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 36 ? CG ? A ASP 3 CG 2 1 Y 1 A ASP 36 ? OD1 ? A ASP 3 OD1 3 1 Y 1 A ASP 36 ? OD2 ? A ASP 3 OD2 4 1 Y 1 A GLU 150 ? CG ? A GLU 117 CG 5 1 Y 1 A GLU 150 ? CD ? A GLU 117 CD 6 1 Y 1 A GLU 150 ? OE1 ? A GLU 117 OE1 7 1 Y 1 A GLU 150 ? OE2 ? A GLU 117 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 34 ? A SER 1 2 1 Y 1 A ASN 152 ? A ASN 119 3 1 Y 1 A LYS 153 ? A LYS 120 4 1 Y 1 A ASP 154 ? A ASP 121 5 1 Y 1 A LEU 155 ? A LEU 122 6 1 Y 1 A ARG 156 ? A ARG 123 7 1 Y 1 A GLN 240 ? A GLN 207 8 1 Y 1 A PRO 241 ? A PRO 208 9 1 Y 1 A LEU 242 ? A LEU 209 10 1 Y 1 A THR 243 ? A THR 210 11 1 Y 1 A PHE 244 ? A PHE 211 12 1 Y 1 A PRO 245 ? A PRO 212 13 1 Y 1 A PRO 246 ? A PRO 213 14 1 Y 1 A GLU 247 ? A GLU 214 15 1 Y 1 A THR 248 ? A THR 215 16 1 Y 1 A GLY 249 ? A GLY 216 17 1 Y 1 A HIS 250 ? A HIS 217 18 1 Y 1 A HIS 251 ? A HIS 218 19 1 Y 1 A HIS 252 ? A HIS 219 20 1 Y 1 A HIS 253 ? A HIS 220 21 1 Y 1 A HIS 254 ? A HIS 221 22 1 Y 1 A HIS 255 ? A HIS 222 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MAN C1 C N S 254 MAN C2 C N S 255 MAN C3 C N S 256 MAN C4 C N S 257 MAN C5 C N R 258 MAN C6 C N N 259 MAN O1 O N N 260 MAN O2 O N N 261 MAN O3 O N N 262 MAN O4 O N N 263 MAN O5 O N N 264 MAN O6 O N N 265 MAN H1 H N N 266 MAN H2 H N N 267 MAN H3 H N N 268 MAN H4 H N N 269 MAN H5 H N N 270 MAN H61 H N N 271 MAN H62 H N N 272 MAN HO1 H N N 273 MAN HO2 H N N 274 MAN HO3 H N N 275 MAN HO4 H N N 276 MAN HO6 H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 NAG C1 C N R 298 NAG C2 C N R 299 NAG C3 C N R 300 NAG C4 C N S 301 NAG C5 C N R 302 NAG C6 C N N 303 NAG C7 C N N 304 NAG C8 C N N 305 NAG N2 N N N 306 NAG O1 O N N 307 NAG O3 O N N 308 NAG O4 O N N 309 NAG O5 O N N 310 NAG O6 O N N 311 NAG O7 O N N 312 NAG H1 H N N 313 NAG H2 H N N 314 NAG H3 H N N 315 NAG H4 H N N 316 NAG H5 H N N 317 NAG H61 H N N 318 NAG H62 H N N 319 NAG H81 H N N 320 NAG H82 H N N 321 NAG H83 H N N 322 NAG HN2 H N N 323 NAG HO1 H N N 324 NAG HO3 H N N 325 NAG HO4 H N N 326 NAG HO6 H N N 327 PHE N N N N 328 PHE CA C N S 329 PHE C C N N 330 PHE O O N N 331 PHE CB C N N 332 PHE CG C Y N 333 PHE CD1 C Y N 334 PHE CD2 C Y N 335 PHE CE1 C Y N 336 PHE CE2 C Y N 337 PHE CZ C Y N 338 PHE OXT O N N 339 PHE H H N N 340 PHE H2 H N N 341 PHE HA H N N 342 PHE HB2 H N N 343 PHE HB3 H N N 344 PHE HD1 H N N 345 PHE HD2 H N N 346 PHE HE1 H N N 347 PHE HE2 H N N 348 PHE HZ H N N 349 PHE HXT H N N 350 PRO N N N N 351 PRO CA C N S 352 PRO C C N N 353 PRO O O N N 354 PRO CB C N N 355 PRO CG C N N 356 PRO CD C N N 357 PRO OXT O N N 358 PRO H H N N 359 PRO HA H N N 360 PRO HB2 H N N 361 PRO HB3 H N N 362 PRO HG2 H N N 363 PRO HG3 H N N 364 PRO HD2 H N N 365 PRO HD3 H N N 366 PRO HXT H N N 367 SER N N N N 368 SER CA C N S 369 SER C C N N 370 SER O O N N 371 SER CB C N N 372 SER OG O N N 373 SER OXT O N N 374 SER H H N N 375 SER H2 H N N 376 SER HA H N N 377 SER HB2 H N N 378 SER HB3 H N N 379 SER HG H N N 380 SER HXT H N N 381 SO4 S S N N 382 SO4 O1 O N N 383 SO4 O2 O N N 384 SO4 O3 O N N 385 SO4 O4 O N N 386 THR N N N N 387 THR CA C N S 388 THR C C N N 389 THR O O N N 390 THR CB C N R 391 THR OG1 O N N 392 THR CG2 C N N 393 THR OXT O N N 394 THR H H N N 395 THR H2 H N N 396 THR HA H N N 397 THR HB H N N 398 THR HG1 H N N 399 THR HG21 H N N 400 THR HG22 H N N 401 THR HG23 H N N 402 THR HXT H N N 403 TRP N N N N 404 TRP CA C N S 405 TRP C C N N 406 TRP O O N N 407 TRP CB C N N 408 TRP CG C Y N 409 TRP CD1 C Y N 410 TRP CD2 C Y N 411 TRP NE1 N Y N 412 TRP CE2 C Y N 413 TRP CE3 C Y N 414 TRP CZ2 C Y N 415 TRP CZ3 C Y N 416 TRP CH2 C Y N 417 TRP OXT O N N 418 TRP H H N N 419 TRP H2 H N N 420 TRP HA H N N 421 TRP HB2 H N N 422 TRP HB3 H N N 423 TRP HD1 H N N 424 TRP HE1 H N N 425 TRP HE3 H N N 426 TRP HZ2 H N N 427 TRP HZ3 H N N 428 TRP HH2 H N N 429 TRP HXT H N N 430 TYR N N N N 431 TYR CA C N S 432 TYR C C N N 433 TYR O O N N 434 TYR CB C N N 435 TYR CG C Y N 436 TYR CD1 C Y N 437 TYR CD2 C Y N 438 TYR CE1 C Y N 439 TYR CE2 C Y N 440 TYR CZ C Y N 441 TYR OH O N N 442 TYR OXT O N N 443 TYR H H N N 444 TYR H2 H N N 445 TYR HA H N N 446 TYR HB2 H N N 447 TYR HB3 H N N 448 TYR HD1 H N N 449 TYR HD2 H N N 450 TYR HE1 H N N 451 TYR HE2 H N N 452 TYR HH H N N 453 TYR HXT H N N 454 VAL N N N N 455 VAL CA C N S 456 VAL C C N N 457 VAL O O N N 458 VAL CB C N N 459 VAL CG1 C N N 460 VAL CG2 C N N 461 VAL OXT O N N 462 VAL H H N N 463 VAL H2 H N N 464 VAL HA H N N 465 VAL HB H N N 466 VAL HG11 H N N 467 VAL HG12 H N N 468 VAL HG13 H N N 469 VAL HG21 H N N 470 VAL HG22 H N N 471 VAL HG23 H N N 472 VAL HXT H N N 473 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 HOH O H1 sing N N 174 HOH O H2 sing N N 175 ILE N CA sing N N 176 ILE N H sing N N 177 ILE N H2 sing N N 178 ILE CA C sing N N 179 ILE CA CB sing N N 180 ILE CA HA sing N N 181 ILE C O doub N N 182 ILE C OXT sing N N 183 ILE CB CG1 sing N N 184 ILE CB CG2 sing N N 185 ILE CB HB sing N N 186 ILE CG1 CD1 sing N N 187 ILE CG1 HG12 sing N N 188 ILE CG1 HG13 sing N N 189 ILE CG2 HG21 sing N N 190 ILE CG2 HG22 sing N N 191 ILE CG2 HG23 sing N N 192 ILE CD1 HD11 sing N N 193 ILE CD1 HD12 sing N N 194 ILE CD1 HD13 sing N N 195 ILE OXT HXT sing N N 196 LEU N CA sing N N 197 LEU N H sing N N 198 LEU N H2 sing N N 199 LEU CA C sing N N 200 LEU CA CB sing N N 201 LEU CA HA sing N N 202 LEU C O doub N N 203 LEU C OXT sing N N 204 LEU CB CG sing N N 205 LEU CB HB2 sing N N 206 LEU CB HB3 sing N N 207 LEU CG CD1 sing N N 208 LEU CG CD2 sing N N 209 LEU CG HG sing N N 210 LEU CD1 HD11 sing N N 211 LEU CD1 HD12 sing N N 212 LEU CD1 HD13 sing N N 213 LEU CD2 HD21 sing N N 214 LEU CD2 HD22 sing N N 215 LEU CD2 HD23 sing N N 216 LEU OXT HXT sing N N 217 LYS N CA sing N N 218 LYS N H sing N N 219 LYS N H2 sing N N 220 LYS CA C sing N N 221 LYS CA CB sing N N 222 LYS CA HA sing N N 223 LYS C O doub N N 224 LYS C OXT sing N N 225 LYS CB CG sing N N 226 LYS CB HB2 sing N N 227 LYS CB HB3 sing N N 228 LYS CG CD sing N N 229 LYS CG HG2 sing N N 230 LYS CG HG3 sing N N 231 LYS CD CE sing N N 232 LYS CD HD2 sing N N 233 LYS CD HD3 sing N N 234 LYS CE NZ sing N N 235 LYS CE HE2 sing N N 236 LYS CE HE3 sing N N 237 LYS NZ HZ1 sing N N 238 LYS NZ HZ2 sing N N 239 LYS NZ HZ3 sing N N 240 LYS OXT HXT sing N N 241 MAN C1 C2 sing N N 242 MAN C1 O1 sing N N 243 MAN C1 O5 sing N N 244 MAN C1 H1 sing N N 245 MAN C2 C3 sing N N 246 MAN C2 O2 sing N N 247 MAN C2 H2 sing N N 248 MAN C3 C4 sing N N 249 MAN C3 O3 sing N N 250 MAN C3 H3 sing N N 251 MAN C4 C5 sing N N 252 MAN C4 O4 sing N N 253 MAN C4 H4 sing N N 254 MAN C5 C6 sing N N 255 MAN C5 O5 sing N N 256 MAN C5 H5 sing N N 257 MAN C6 O6 sing N N 258 MAN C6 H61 sing N N 259 MAN C6 H62 sing N N 260 MAN O1 HO1 sing N N 261 MAN O2 HO2 sing N N 262 MAN O3 HO3 sing N N 263 MAN O4 HO4 sing N N 264 MAN O6 HO6 sing N N 265 MET N CA sing N N 266 MET N H sing N N 267 MET N H2 sing N N 268 MET CA C sing N N 269 MET CA CB sing N N 270 MET CA HA sing N N 271 MET C O doub N N 272 MET C OXT sing N N 273 MET CB CG sing N N 274 MET CB HB2 sing N N 275 MET CB HB3 sing N N 276 MET CG SD sing N N 277 MET CG HG2 sing N N 278 MET CG HG3 sing N N 279 MET SD CE sing N N 280 MET CE HE1 sing N N 281 MET CE HE2 sing N N 282 MET CE HE3 sing N N 283 MET OXT HXT sing N N 284 NAG C1 C2 sing N N 285 NAG C1 O1 sing N N 286 NAG C1 O5 sing N N 287 NAG C1 H1 sing N N 288 NAG C2 C3 sing N N 289 NAG C2 N2 sing N N 290 NAG C2 H2 sing N N 291 NAG C3 C4 sing N N 292 NAG C3 O3 sing N N 293 NAG C3 H3 sing N N 294 NAG C4 C5 sing N N 295 NAG C4 O4 sing N N 296 NAG C4 H4 sing N N 297 NAG C5 C6 sing N N 298 NAG C5 O5 sing N N 299 NAG C5 H5 sing N N 300 NAG C6 O6 sing N N 301 NAG C6 H61 sing N N 302 NAG C6 H62 sing N N 303 NAG C7 C8 sing N N 304 NAG C7 N2 sing N N 305 NAG C7 O7 doub N N 306 NAG C8 H81 sing N N 307 NAG C8 H82 sing N N 308 NAG C8 H83 sing N N 309 NAG N2 HN2 sing N N 310 NAG O1 HO1 sing N N 311 NAG O3 HO3 sing N N 312 NAG O4 HO4 sing N N 313 NAG O6 HO6 sing N N 314 PHE N CA sing N N 315 PHE N H sing N N 316 PHE N H2 sing N N 317 PHE CA C sing N N 318 PHE CA CB sing N N 319 PHE CA HA sing N N 320 PHE C O doub N N 321 PHE C OXT sing N N 322 PHE CB CG sing N N 323 PHE CB HB2 sing N N 324 PHE CB HB3 sing N N 325 PHE CG CD1 doub Y N 326 PHE CG CD2 sing Y N 327 PHE CD1 CE1 sing Y N 328 PHE CD1 HD1 sing N N 329 PHE CD2 CE2 doub Y N 330 PHE CD2 HD2 sing N N 331 PHE CE1 CZ doub Y N 332 PHE CE1 HE1 sing N N 333 PHE CE2 CZ sing Y N 334 PHE CE2 HE2 sing N N 335 PHE CZ HZ sing N N 336 PHE OXT HXT sing N N 337 PRO N CA sing N N 338 PRO N CD sing N N 339 PRO N H sing N N 340 PRO CA C sing N N 341 PRO CA CB sing N N 342 PRO CA HA sing N N 343 PRO C O doub N N 344 PRO C OXT sing N N 345 PRO CB CG sing N N 346 PRO CB HB2 sing N N 347 PRO CB HB3 sing N N 348 PRO CG CD sing N N 349 PRO CG HG2 sing N N 350 PRO CG HG3 sing N N 351 PRO CD HD2 sing N N 352 PRO CD HD3 sing N N 353 PRO OXT HXT sing N N 354 SER N CA sing N N 355 SER N H sing N N 356 SER N H2 sing N N 357 SER CA C sing N N 358 SER CA CB sing N N 359 SER CA HA sing N N 360 SER C O doub N N 361 SER C OXT sing N N 362 SER CB OG sing N N 363 SER CB HB2 sing N N 364 SER CB HB3 sing N N 365 SER OG HG sing N N 366 SER OXT HXT sing N N 367 SO4 S O1 doub N N 368 SO4 S O2 doub N N 369 SO4 S O3 sing N N 370 SO4 S O4 sing N N 371 THR N CA sing N N 372 THR N H sing N N 373 THR N H2 sing N N 374 THR CA C sing N N 375 THR CA CB sing N N 376 THR CA HA sing N N 377 THR C O doub N N 378 THR C OXT sing N N 379 THR CB OG1 sing N N 380 THR CB CG2 sing N N 381 THR CB HB sing N N 382 THR OG1 HG1 sing N N 383 THR CG2 HG21 sing N N 384 THR CG2 HG22 sing N N 385 THR CG2 HG23 sing N N 386 THR OXT HXT sing N N 387 TRP N CA sing N N 388 TRP N H sing N N 389 TRP N H2 sing N N 390 TRP CA C sing N N 391 TRP CA CB sing N N 392 TRP CA HA sing N N 393 TRP C O doub N N 394 TRP C OXT sing N N 395 TRP CB CG sing N N 396 TRP CB HB2 sing N N 397 TRP CB HB3 sing N N 398 TRP CG CD1 doub Y N 399 TRP CG CD2 sing Y N 400 TRP CD1 NE1 sing Y N 401 TRP CD1 HD1 sing N N 402 TRP CD2 CE2 doub Y N 403 TRP CD2 CE3 sing Y N 404 TRP NE1 CE2 sing Y N 405 TRP NE1 HE1 sing N N 406 TRP CE2 CZ2 sing Y N 407 TRP CE3 CZ3 doub Y N 408 TRP CE3 HE3 sing N N 409 TRP CZ2 CH2 doub Y N 410 TRP CZ2 HZ2 sing N N 411 TRP CZ3 CH2 sing Y N 412 TRP CZ3 HZ3 sing N N 413 TRP CH2 HH2 sing N N 414 TRP OXT HXT sing N N 415 TYR N CA sing N N 416 TYR N H sing N N 417 TYR N H2 sing N N 418 TYR CA C sing N N 419 TYR CA CB sing N N 420 TYR CA HA sing N N 421 TYR C O doub N N 422 TYR C OXT sing N N 423 TYR CB CG sing N N 424 TYR CB HB2 sing N N 425 TYR CB HB3 sing N N 426 TYR CG CD1 doub Y N 427 TYR CG CD2 sing Y N 428 TYR CD1 CE1 sing Y N 429 TYR CD1 HD1 sing N N 430 TYR CD2 CE2 doub Y N 431 TYR CD2 HD2 sing N N 432 TYR CE1 CZ doub Y N 433 TYR CE1 HE1 sing N N 434 TYR CE2 CZ sing Y N 435 TYR CE2 HE2 sing N N 436 TYR CZ OH sing N N 437 TYR OH HH sing N N 438 TYR OXT HXT sing N N 439 VAL N CA sing N N 440 VAL N H sing N N 441 VAL N H2 sing N N 442 VAL CA C sing N N 443 VAL CA CB sing N N 444 VAL CA HA sing N N 445 VAL C O doub N N 446 VAL C OXT sing N N 447 VAL CB CG1 sing N N 448 VAL CB CG2 sing N N 449 VAL CB HB sing N N 450 VAL CG1 HG11 sing N N 451 VAL CG1 HG12 sing N N 452 VAL CG1 HG13 sing N N 453 VAL CG2 HG21 sing N N 454 VAL CG2 HG22 sing N N 455 VAL CG2 HG23 sing N N 456 VAL OXT HXT sing N N 457 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 B NAG 1 n B 2 NAG 2 B NAG 2 B NAG 2 n B 2 BMA 3 B BMA 3 B BMA 3 n B 2 MAN 4 B MAN 4 B MAN 4 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpa1-6DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3/a4-b1_b4-c1_c6-d1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(6+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 'SULFATE ION' SO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3BIS _pdbx_initial_refinement_model.details 'PDB ENTRY 3BIS' #