data_4I1T # _entry.id 4I1T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4I1T pdb_00004i1t 10.2210/pdb4i1t/pdb RCSB RCSB076196 ? ? WWPDB D_1000076196 ? ? # _pdbx_database_status.entry_id 4I1T _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-11-21 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bussetta, C.' 1 'Choi, K.H.' 2 # _citation.id primary _citation.title 'Crystal structure of the cap-snatching endonuclease from Pichinde virus, a new world arenavirus' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bussetta, C.' 1 ? primary 'Ye, M.' 2 ? primary 'Shrestha, L.' 3 ? primary 'Bujalowski, P.J.' 4 ? primary 'White, M.A.' 5 ? primary 'Choi, K.H.' 6 ? # _cell.length_a 142.962 _cell.length_b 142.962 _cell.length_c 46.835 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4I1T _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.entry_id 4I1T _symmetry.Int_Tables_number 181 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RNA-directed RNA polymerase L' _entity.formula_weight 25140.799 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 2.7.7.48 _entity.pdbx_mutation ? _entity.pdbx_fragment 'cap-snatching endonuclease domain (residues 1-194)' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein L' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGRENLYFQGMEEYVSEFKDMVRKWVPEWEELSEQKNNVLAQVKDRAITIEGLKLLSMLVEVDSCKKHS CRHNTRMTVNAILRELKVTCPTLPDVTPDGYCMVGDVLILLEVFVRTSQEAFEKKYNQDFLKLMQLSSDLKRQNITLVPV IDGRSSYYVEYIPDWVVERLRWLLLKLMDGLRTSGEEVEELEYERLISSLSSLEN ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGRENLYFQGMEEYVSEFKDMVRKWVPEWEELSEQKNNVLAQVKDRAITIEGLKLLSMLVEVDSCKKHS CRHNTRMTVNAILRELKVTCPTLPDVTPDGYCMVGDVLILLEVFVRTSQEAFEKKYNQDFLKLMQLSSDLKRQNITLVPV IDGRSSYYVEYIPDWVVERLRWLLLKLMDGLRTSGEEVEELEYERLISSLSSLEN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 ARG n 1 15 GLU n 1 16 ASN n 1 17 LEU n 1 18 TYR n 1 19 PHE n 1 20 GLN n 1 21 GLY n 1 22 MET n 1 23 GLU n 1 24 GLU n 1 25 TYR n 1 26 VAL n 1 27 SER n 1 28 GLU n 1 29 PHE n 1 30 LYS n 1 31 ASP n 1 32 MET n 1 33 VAL n 1 34 ARG n 1 35 LYS n 1 36 TRP n 1 37 VAL n 1 38 PRO n 1 39 GLU n 1 40 TRP n 1 41 GLU n 1 42 GLU n 1 43 LEU n 1 44 SER n 1 45 GLU n 1 46 GLN n 1 47 LYS n 1 48 ASN n 1 49 ASN n 1 50 VAL n 1 51 LEU n 1 52 ALA n 1 53 GLN n 1 54 VAL n 1 55 LYS n 1 56 ASP n 1 57 ARG n 1 58 ALA n 1 59 ILE n 1 60 THR n 1 61 ILE n 1 62 GLU n 1 63 GLY n 1 64 LEU n 1 65 LYS n 1 66 LEU n 1 67 LEU n 1 68 SER n 1 69 MET n 1 70 LEU n 1 71 VAL n 1 72 GLU n 1 73 VAL n 1 74 ASP n 1 75 SER n 1 76 CYS n 1 77 LYS n 1 78 LYS n 1 79 HIS n 1 80 SER n 1 81 CYS n 1 82 ARG n 1 83 HIS n 1 84 ASN n 1 85 THR n 1 86 ARG n 1 87 MET n 1 88 THR n 1 89 VAL n 1 90 ASN n 1 91 ALA n 1 92 ILE n 1 93 LEU n 1 94 ARG n 1 95 GLU n 1 96 LEU n 1 97 LYS n 1 98 VAL n 1 99 THR n 1 100 CYS n 1 101 PRO n 1 102 THR n 1 103 LEU n 1 104 PRO n 1 105 ASP n 1 106 VAL n 1 107 THR n 1 108 PRO n 1 109 ASP n 1 110 GLY n 1 111 TYR n 1 112 CYS n 1 113 MET n 1 114 VAL n 1 115 GLY n 1 116 ASP n 1 117 VAL n 1 118 LEU n 1 119 ILE n 1 120 LEU n 1 121 LEU n 1 122 GLU n 1 123 VAL n 1 124 PHE n 1 125 VAL n 1 126 ARG n 1 127 THR n 1 128 SER n 1 129 GLN n 1 130 GLU n 1 131 ALA n 1 132 PHE n 1 133 GLU n 1 134 LYS n 1 135 LYS n 1 136 TYR n 1 137 ASN n 1 138 GLN n 1 139 ASP n 1 140 PHE n 1 141 LEU n 1 142 LYS n 1 143 LEU n 1 144 MET n 1 145 GLN n 1 146 LEU n 1 147 SER n 1 148 SER n 1 149 ASP n 1 150 LEU n 1 151 LYS n 1 152 ARG n 1 153 GLN n 1 154 ASN n 1 155 ILE n 1 156 THR n 1 157 LEU n 1 158 VAL n 1 159 PRO n 1 160 VAL n 1 161 ILE n 1 162 ASP n 1 163 GLY n 1 164 ARG n 1 165 SER n 1 166 SER n 1 167 TYR n 1 168 TYR n 1 169 VAL n 1 170 GLU n 1 171 TYR n 1 172 ILE n 1 173 PRO n 1 174 ASP n 1 175 TRP n 1 176 VAL n 1 177 VAL n 1 178 GLU n 1 179 ARG n 1 180 LEU n 1 181 ARG n 1 182 TRP n 1 183 LEU n 1 184 LEU n 1 185 LEU n 1 186 LYS n 1 187 LEU n 1 188 MET n 1 189 ASP n 1 190 GLY n 1 191 LEU n 1 192 ARG n 1 193 THR n 1 194 SER n 1 195 GLY n 1 196 GLU n 1 197 GLU n 1 198 VAL n 1 199 GLU n 1 200 GLU n 1 201 LEU n 1 202 GLU n 1 203 TYR n 1 204 GLU n 1 205 ARG n 1 206 LEU n 1 207 ILE n 1 208 SER n 1 209 SER n 1 210 LEU n 1 211 SER n 1 212 SER n 1 213 LEU n 1 214 GLU n 1 215 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name PICV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene L _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain AN3739 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pichinde virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Rosetta _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pJexpress411 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q915A5_PIARV _struct_ref.pdbx_db_accession Q915A5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEEYVSEFKDMVRKWVPEWEELSEQKNNVLAQVKDRAITIEGLKLLSMLVEVDSCKKHSCRHNTRMTVNAILRELKVTCP TLPDVTPDGYCMVGDVLILLEVFVRTSQEAFEKKYNQDFLKLMQLSSDLKRQNITLVPVIDGRSSYYVEYIPDWVVERLR WLLLKLMDGLRTSGEEVEELEYERLISSLSSLEN ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4I1T _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 22 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 215 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q915A5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 194 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 194 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4I1T MET A 1 ? UNP Q915A5 ? ? 'expression tag' -20 1 1 4I1T GLY A 2 ? UNP Q915A5 ? ? 'expression tag' -19 2 1 4I1T SER A 3 ? UNP Q915A5 ? ? 'expression tag' -18 3 1 4I1T SER A 4 ? UNP Q915A5 ? ? 'expression tag' -17 4 1 4I1T HIS A 5 ? UNP Q915A5 ? ? 'expression tag' -16 5 1 4I1T HIS A 6 ? UNP Q915A5 ? ? 'expression tag' -15 6 1 4I1T HIS A 7 ? UNP Q915A5 ? ? 'expression tag' -14 7 1 4I1T HIS A 8 ? UNP Q915A5 ? ? 'expression tag' -13 8 1 4I1T HIS A 9 ? UNP Q915A5 ? ? 'expression tag' -12 9 1 4I1T HIS A 10 ? UNP Q915A5 ? ? 'expression tag' -11 10 1 4I1T SER A 11 ? UNP Q915A5 ? ? 'expression tag' -10 11 1 4I1T SER A 12 ? UNP Q915A5 ? ? 'expression tag' -9 12 1 4I1T GLY A 13 ? UNP Q915A5 ? ? 'expression tag' -8 13 1 4I1T ARG A 14 ? UNP Q915A5 ? ? 'expression tag' -7 14 1 4I1T GLU A 15 ? UNP Q915A5 ? ? 'expression tag' -6 15 1 4I1T ASN A 16 ? UNP Q915A5 ? ? 'expression tag' -5 16 1 4I1T LEU A 17 ? UNP Q915A5 ? ? 'expression tag' -4 17 1 4I1T TYR A 18 ? UNP Q915A5 ? ? 'expression tag' -3 18 1 4I1T PHE A 19 ? UNP Q915A5 ? ? 'expression tag' -2 19 1 4I1T GLN A 20 ? UNP Q915A5 ? ? 'expression tag' -1 20 1 4I1T GLY A 21 ? UNP Q915A5 ? ? 'expression tag' 0 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4I1T _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '6M ammonium nitrate, 0.1M Tris, pH 8.5, vapor diffusion, sitting drop, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details mirrors _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2011-06-09 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97946 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.97946 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 # _reflns.entry_id 4I1T _reflns.d_resolution_high 2.800 _reflns.d_resolution_low 50.000 _reflns.number_obs 7360 _reflns.pdbx_Rmerge_I_obs 0.088 _reflns.pdbx_netI_over_sigmaI 29.87 _reflns.pdbx_chi_squared 1.896 _reflns.pdbx_redundancy 15.100 _reflns.percent_possible_obs 99.800 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.800 2.850 ? ? ? 0.620 3.77 ? 1.487 3.900 ? 350 97.800 1 1 2.850 2.900 ? ? ? 0.880 2.13 ? 1.674 4.600 ? 348 98.900 2 1 2.900 2.960 ? ? ? 0.804 2.09 ? 1.460 5.200 ? 366 100.000 3 1 2.960 3.020 ? ? ? 0.800 2.43 ? 1.510 5.900 ? 346 100.000 4 1 3.020 3.080 ? ? ? 0.609 4.03 ? 1.973 6.400 ? 358 99.700 5 1 3.080 3.150 ? ? ? 0.500 5.97 ? 1.795 7.900 ? 362 100.000 6 1 3.150 3.230 ? ? ? 0.402 8.38 ? 1.749 9.500 ? 361 100.000 7 1 3.230 3.320 ? ? ? 0.300 11.90 ? 1.872 9.700 ? 359 100.000 8 1 3.320 3.420 ? ? ? 0.269 13.70 ? 1.961 9.800 ? 361 100.000 9 1 3.420 3.530 ? ? ? 0.219 16.90 ? 2.093 9.900 ? 350 100.000 10 1 3.530 3.650 ? ? ? 0.184 20.12 ? 1.971 10.500 ? 374 100.000 11 1 3.650 3.800 ? ? ? 0.151 24.47 ? 1.973 11.000 ? 359 100.000 12 1 3.800 3.970 ? ? ? 0.129 28.88 ? 2.182 11.000 ? 371 100.000 13 1 3.970 4.180 ? ? ? 0.136 42.56 ? 1.856 24.700 ? 365 100.000 14 1 4.180 4.440 ? ? ? 0.108 57.07 ? 2.030 27.600 ? 367 100.000 15 1 4.440 4.790 ? ? ? 0.085 69.02 ? 1.878 28.100 ? 375 100.000 16 1 4.790 5.270 ? ? ? 0.085 69.03 ? 1.923 28.800 ? 379 100.000 17 1 5.270 6.030 ? ? ? 0.093 65.07 ? 1.886 28.600 ? 379 100.000 18 1 6.030 7.590 ? ? ? 0.065 83.24 ? 1.751 28.200 ? 391 100.000 19 1 7.590 50.000 ? ? ? 0.039 97.81 ? 1.971 24.500 ? 439 100.000 20 1 # _refine.ls_percent_reflns_R_free 4.6500 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4I1T _refine.aniso_B[2][3] 0.0000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.3900 _refine.pdbx_ls_sigma_I ? _refine.aniso_B[1][3] -0.0000 _refine.pdbx_stereochemistry_target_values ML _refine.aniso_B[3][3] -13.5585 _refine.occupancy_max 1.000 _refine.ls_number_restraints ? _refine.aniso_B[1][1] 6.7793 _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.2387 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model 'PDB ENTRY 3JSB' _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.solvent_model_param_ksol 0.4080 _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 339 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 1.340 _refine.ls_percent_reflns_obs 99.1200 _refine.ls_R_factor_R_work 0.2361 _refine.overall_SU_R_free ? _refine.ls_d_res_high 2.8000 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min 24.960 _refine.occupancy_min 1.000 _refine.B_iso_mean 78.3406 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] 6.7793 _refine.B_iso_max 185.250 _refine.ls_d_res_low 46.7950 _refine.pdbx_overall_phase_error 31.7600 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] 0.0000 _refine.ls_R_factor_R_free 0.2944 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 7286 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ? _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol 77.0420 _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1386 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1386 _refine_hist.d_res_high 2.8000 _refine_hist.d_res_low 46.7950 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1411 0.009 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1907 1.208 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 220 0.073 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 237 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 543 17.223 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.8001 3.5277 2 99.0000 3347 . 0.2560 0.3402 . 183 . 3530 3347 . 'X-RAY DIFFRACTION' 3.5277 46.8018 2 99.0000 3600 . 0.2293 0.2745 . 156 . 3756 3600 . 'X-RAY DIFFRACTION' # _struct.entry_id 4I1T _struct.title 'Crystal structure of the cap-snatching endonuclease from Pichinde virus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4I1T _struct_keywords.text ;Arenavirus, Pichinde virus, viral transcription, cap-snatching, endonuclease, L protein, RNA-dependent RNA polymerase, PD-(D/E)XK nuclease fold, cap-snatching RNA endonuclease, VIRAL PROTEIN ; _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 24 ? VAL A 37 ? GLU A 3 VAL A 16 1 ? 14 HELX_P HELX_P2 2 TRP A 40 ? GLN A 53 ? TRP A 19 GLN A 32 1 ? 14 HELX_P HELX_P3 3 LYS A 55 ? HIS A 79 ? LYS A 34 HIS A 58 1 ? 25 HELX_P HELX_P4 4 THR A 88 ? LEU A 96 ? THR A 67 LEU A 75 1 ? 9 HELX_P HELX_P5 5 SER A 128 ? GLN A 145 ? SER A 107 GLN A 124 1 ? 18 HELX_P HELX_P6 6 LEU A 146 ? GLN A 153 ? LEU A 125 GLN A 132 1 ? 8 HELX_P HELX_P7 7 PRO A 173 ? ASP A 189 ? PRO A 152 ASP A 168 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 82 ? HIS A 83 ? ARG A 61 HIS A 62 A 2 GLY A 110 ? VAL A 114 ? GLY A 89 VAL A 93 A 3 VAL A 117 ? VAL A 125 ? VAL A 96 VAL A 104 A 4 THR A 156 ? ARG A 164 ? THR A 135 ARG A 143 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 82 ? N ARG A 61 O TYR A 111 ? O TYR A 90 A 2 3 N GLY A 110 ? N GLY A 89 O LEU A 121 ? O LEU A 100 A 3 4 N LEU A 118 ? N LEU A 97 O VAL A 158 ? O VAL A 137 # _atom_sites.entry_id 4I1T _atom_sites.fract_transf_matrix[1][1] 0.006995 _atom_sites.fract_transf_matrix[1][2] 0.004038 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008077 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021352 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -20 ? ? ? A . n A 1 2 GLY 2 -19 ? ? ? A . n A 1 3 SER 3 -18 ? ? ? A . n A 1 4 SER 4 -17 ? ? ? A . n A 1 5 HIS 5 -16 ? ? ? A . n A 1 6 HIS 6 -15 ? ? ? A . n A 1 7 HIS 7 -14 ? ? ? A . n A 1 8 HIS 8 -13 ? ? ? A . n A 1 9 HIS 9 -12 ? ? ? A . n A 1 10 HIS 10 -11 ? ? ? A . n A 1 11 SER 11 -10 ? ? ? A . n A 1 12 SER 12 -9 ? ? ? A . n A 1 13 GLY 13 -8 ? ? ? A . n A 1 14 ARG 14 -7 ? ? ? A . n A 1 15 GLU 15 -6 ? ? ? A . n A 1 16 ASN 16 -5 ? ? ? A . n A 1 17 LEU 17 -4 ? ? ? A . n A 1 18 TYR 18 -3 ? ? ? A . n A 1 19 PHE 19 -2 ? ? ? A . n A 1 20 GLN 20 -1 ? ? ? A . n A 1 21 GLY 21 0 ? ? ? A . n A 1 22 MET 22 1 1 MET MET A . n A 1 23 GLU 23 2 2 GLU GLU A . n A 1 24 GLU 24 3 3 GLU GLU A . n A 1 25 TYR 25 4 4 TYR TYR A . n A 1 26 VAL 26 5 5 VAL VAL A . n A 1 27 SER 27 6 6 SER SER A . n A 1 28 GLU 28 7 7 GLU GLU A . n A 1 29 PHE 29 8 8 PHE PHE A . n A 1 30 LYS 30 9 9 LYS LYS A . n A 1 31 ASP 31 10 10 ASP ASP A . n A 1 32 MET 32 11 11 MET MET A . n A 1 33 VAL 33 12 12 VAL VAL A . n A 1 34 ARG 34 13 13 ARG ARG A . n A 1 35 LYS 35 14 14 LYS LYS A . n A 1 36 TRP 36 15 15 TRP TRP A . n A 1 37 VAL 37 16 16 VAL VAL A . n A 1 38 PRO 38 17 17 PRO PRO A . n A 1 39 GLU 39 18 18 GLU GLU A . n A 1 40 TRP 40 19 19 TRP TRP A . n A 1 41 GLU 41 20 20 GLU GLU A . n A 1 42 GLU 42 21 21 GLU GLU A . n A 1 43 LEU 43 22 22 LEU LEU A . n A 1 44 SER 44 23 23 SER SER A . n A 1 45 GLU 45 24 24 GLU GLU A . n A 1 46 GLN 46 25 25 GLN GLN A . n A 1 47 LYS 47 26 26 LYS LYS A . n A 1 48 ASN 48 27 27 ASN ASN A . n A 1 49 ASN 49 28 28 ASN ASN A . n A 1 50 VAL 50 29 29 VAL VAL A . n A 1 51 LEU 51 30 30 LEU LEU A . n A 1 52 ALA 52 31 31 ALA ALA A . n A 1 53 GLN 53 32 32 GLN GLN A . n A 1 54 VAL 54 33 33 VAL VAL A . n A 1 55 LYS 55 34 34 LYS LYS A . n A 1 56 ASP 56 35 35 ASP ASP A . n A 1 57 ARG 57 36 36 ARG ARG A . n A 1 58 ALA 58 37 37 ALA ALA A . n A 1 59 ILE 59 38 38 ILE ILE A . n A 1 60 THR 60 39 39 THR THR A . n A 1 61 ILE 61 40 40 ILE ILE A . n A 1 62 GLU 62 41 41 GLU GLU A . n A 1 63 GLY 63 42 42 GLY GLY A . n A 1 64 LEU 64 43 43 LEU LEU A . n A 1 65 LYS 65 44 44 LYS LYS A . n A 1 66 LEU 66 45 45 LEU LEU A . n A 1 67 LEU 67 46 46 LEU LEU A . n A 1 68 SER 68 47 47 SER SER A . n A 1 69 MET 69 48 48 MET MET A . n A 1 70 LEU 70 49 49 LEU LEU A . n A 1 71 VAL 71 50 50 VAL VAL A . n A 1 72 GLU 72 51 51 GLU GLU A . n A 1 73 VAL 73 52 52 VAL VAL A . n A 1 74 ASP 74 53 53 ASP ASP A . n A 1 75 SER 75 54 54 SER SER A . n A 1 76 CYS 76 55 55 CYS CYS A . n A 1 77 LYS 77 56 56 LYS LYS A . n A 1 78 LYS 78 57 57 LYS LYS A . n A 1 79 HIS 79 58 58 HIS HIS A . n A 1 80 SER 80 59 59 SER SER A . n A 1 81 CYS 81 60 60 CYS CYS A . n A 1 82 ARG 82 61 61 ARG ARG A . n A 1 83 HIS 83 62 62 HIS HIS A . n A 1 84 ASN 84 63 63 ASN ASN A . n A 1 85 THR 85 64 64 THR THR A . n A 1 86 ARG 86 65 65 ARG ARG A . n A 1 87 MET 87 66 66 MET MET A . n A 1 88 THR 88 67 67 THR THR A . n A 1 89 VAL 89 68 68 VAL VAL A . n A 1 90 ASN 90 69 69 ASN ASN A . n A 1 91 ALA 91 70 70 ALA ALA A . n A 1 92 ILE 92 71 71 ILE ILE A . n A 1 93 LEU 93 72 72 LEU LEU A . n A 1 94 ARG 94 73 73 ARG ARG A . n A 1 95 GLU 95 74 74 GLU GLU A . n A 1 96 LEU 96 75 75 LEU LEU A . n A 1 97 LYS 97 76 76 LYS LYS A . n A 1 98 VAL 98 77 77 VAL VAL A . n A 1 99 THR 99 78 78 THR THR A . n A 1 100 CYS 100 79 79 CYS CYS A . n A 1 101 PRO 101 80 80 PRO PRO A . n A 1 102 THR 102 81 81 THR THR A . n A 1 103 LEU 103 82 82 LEU LEU A . n A 1 104 PRO 104 83 83 PRO PRO A . n A 1 105 ASP 105 84 84 ASP ASP A . n A 1 106 VAL 106 85 85 VAL VAL A . n A 1 107 THR 107 86 86 THR THR A . n A 1 108 PRO 108 87 87 PRO PRO A . n A 1 109 ASP 109 88 88 ASP ASP A . n A 1 110 GLY 110 89 89 GLY GLY A . n A 1 111 TYR 111 90 90 TYR TYR A . n A 1 112 CYS 112 91 91 CYS CYS A . n A 1 113 MET 113 92 92 MET MET A . n A 1 114 VAL 114 93 93 VAL VAL A . n A 1 115 GLY 115 94 94 GLY GLY A . n A 1 116 ASP 116 95 95 ASP ASP A . n A 1 117 VAL 117 96 96 VAL VAL A . n A 1 118 LEU 118 97 97 LEU LEU A . n A 1 119 ILE 119 98 98 ILE ILE A . n A 1 120 LEU 120 99 99 LEU LEU A . n A 1 121 LEU 121 100 100 LEU LEU A . n A 1 122 GLU 122 101 101 GLU GLU A . n A 1 123 VAL 123 102 102 VAL VAL A . n A 1 124 PHE 124 103 103 PHE PHE A . n A 1 125 VAL 125 104 104 VAL VAL A . n A 1 126 ARG 126 105 105 ARG ARG A . n A 1 127 THR 127 106 106 THR THR A . n A 1 128 SER 128 107 107 SER SER A . n A 1 129 GLN 129 108 108 GLN GLN A . n A 1 130 GLU 130 109 109 GLU GLU A . n A 1 131 ALA 131 110 110 ALA ALA A . n A 1 132 PHE 132 111 111 PHE PHE A . n A 1 133 GLU 133 112 112 GLU GLU A . n A 1 134 LYS 134 113 113 LYS LYS A . n A 1 135 LYS 135 114 114 LYS LYS A . n A 1 136 TYR 136 115 115 TYR TYR A . n A 1 137 ASN 137 116 116 ASN ASN A . n A 1 138 GLN 138 117 117 GLN GLN A . n A 1 139 ASP 139 118 118 ASP ASP A . n A 1 140 PHE 140 119 119 PHE PHE A . n A 1 141 LEU 141 120 120 LEU LEU A . n A 1 142 LYS 142 121 121 LYS LYS A . n A 1 143 LEU 143 122 122 LEU LEU A . n A 1 144 MET 144 123 123 MET MET A . n A 1 145 GLN 145 124 124 GLN GLN A . n A 1 146 LEU 146 125 125 LEU LEU A . n A 1 147 SER 147 126 126 SER SER A . n A 1 148 SER 148 127 127 SER SER A . n A 1 149 ASP 149 128 128 ASP ASP A . n A 1 150 LEU 150 129 129 LEU LEU A . n A 1 151 LYS 151 130 130 LYS LYS A . n A 1 152 ARG 152 131 131 ARG ARG A . n A 1 153 GLN 153 132 132 GLN GLN A . n A 1 154 ASN 154 133 133 ASN ASN A . n A 1 155 ILE 155 134 134 ILE ILE A . n A 1 156 THR 156 135 135 THR THR A . n A 1 157 LEU 157 136 136 LEU LEU A . n A 1 158 VAL 158 137 137 VAL VAL A . n A 1 159 PRO 159 138 138 PRO PRO A . n A 1 160 VAL 160 139 139 VAL VAL A . n A 1 161 ILE 161 140 140 ILE ILE A . n A 1 162 ASP 162 141 141 ASP ASP A . n A 1 163 GLY 163 142 142 GLY GLY A . n A 1 164 ARG 164 143 143 ARG ARG A . n A 1 165 SER 165 144 144 SER SER A . n A 1 166 SER 166 145 145 SER SER A . n A 1 167 TYR 167 146 146 TYR TYR A . n A 1 168 TYR 168 147 147 TYR TYR A . n A 1 169 VAL 169 148 148 VAL VAL A . n A 1 170 GLU 170 149 149 GLU GLU A . n A 1 171 TYR 171 150 150 TYR TYR A . n A 1 172 ILE 172 151 151 ILE ILE A . n A 1 173 PRO 173 152 152 PRO PRO A . n A 1 174 ASP 174 153 153 ASP ASP A . n A 1 175 TRP 175 154 154 TRP TRP A . n A 1 176 VAL 176 155 155 VAL VAL A . n A 1 177 VAL 177 156 156 VAL VAL A . n A 1 178 GLU 178 157 157 GLU GLU A . n A 1 179 ARG 179 158 158 ARG ARG A . n A 1 180 LEU 180 159 159 LEU LEU A . n A 1 181 ARG 181 160 160 ARG ARG A . n A 1 182 TRP 182 161 161 TRP TRP A . n A 1 183 LEU 183 162 162 LEU LEU A . n A 1 184 LEU 184 163 163 LEU LEU A . n A 1 185 LEU 185 164 164 LEU LEU A . n A 1 186 LYS 186 165 165 LYS LYS A . n A 1 187 LEU 187 166 166 LEU LEU A . n A 1 188 MET 188 167 167 MET MET A . n A 1 189 ASP 189 168 168 ASP ASP A . n A 1 190 GLY 190 169 169 GLY GLY A . n A 1 191 LEU 191 170 ? ? ? A . n A 1 192 ARG 192 171 ? ? ? A . n A 1 193 THR 193 172 ? ? ? A . n A 1 194 SER 194 173 ? ? ? A . n A 1 195 GLY 195 174 ? ? ? A . n A 1 196 GLU 196 175 ? ? ? A . n A 1 197 GLU 197 176 ? ? ? A . n A 1 198 VAL 198 177 ? ? ? A . n A 1 199 GLU 199 178 ? ? ? A . n A 1 200 GLU 200 179 ? ? ? A . n A 1 201 LEU 201 180 ? ? ? A . n A 1 202 GLU 202 181 ? ? ? A . n A 1 203 TYR 203 182 ? ? ? A . n A 1 204 GLU 204 183 ? ? ? A . n A 1 205 ARG 205 184 ? ? ? A . n A 1 206 LEU 206 185 ? ? ? A . n A 1 207 ILE 207 186 ? ? ? A . n A 1 208 SER 208 187 ? ? ? A . n A 1 209 SER 209 188 ? ? ? A . n A 1 210 LEU 210 189 ? ? ? A . n A 1 211 SER 211 190 ? ? ? A . n A 1 212 SER 212 191 ? ? ? A . n A 1 213 LEU 213 192 ? ? ? A . n A 1 214 GLU 214 193 ? ? ? A . n A 1 215 ASN 215 194 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1670 ? 1 MORE -10 ? 1 'SSA (A^2)' 17810 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z+1/3 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 15.6116666667 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-02-26 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.name' 3 3 'Structure model' '_database_2.pdbx_DOI' 4 3 'Structure model' '_database_2.pdbx_database_accession' 5 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -1.1823 51.8825 10.7352 0.2168 0.7803 0.4510 0.0432 0.0712 0.0079 2.5227 3.3863 2.0962 -2.4955 0.4301 -0.5995 -0.2447 0.0252 -0.0046 0.1439 0.9600 0.2786 -0.4514 -0.2925 -0.4684 'X-RAY DIFFRACTION' 2 ? refined 20.9263 55.1608 0.9836 0.1389 0.6888 0.3947 0.2799 0.0328 -0.0178 3.7411 1.3033 2.4017 0.8120 -1.8368 0.1424 0.0131 0.1750 0.0126 0.5518 0.1024 0.8430 -0.4879 -0.1678 -1.0531 'X-RAY DIFFRACTION' 3 ? refined 24.9890 43.7097 -3.4033 0.4223 0.5871 0.5001 0.1356 0.1333 -0.1327 1.6564 0.9282 2.3489 -0.1682 -0.9217 0.4587 -0.6320 0.2202 0.0045 0.9031 -0.7456 0.1176 -0.8310 1.0736 -0.1553 'X-RAY DIFFRACTION' 4 ? refined 8.6143 43.2410 12.0863 -0.0691 0.5933 0.4690 -0.0031 0.0687 0.0572 1.7572 1.6333 3.5546 -1.1973 -0.8093 -1.1878 -0.1001 0.4027 0.0554 -0.8494 -0.6678 0.4859 0.0391 1.5649 -0.3404 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 50 '(chain A and resid 1:50)' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 51 A 106 '(chain A and resid 51:106)' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 107 A 133 '(chain A and resid 107:133)' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 134 A 169 '(chain A and resid 134:169)' ? ? ? ? ? # _pdbx_phasing_MR.entry_id 4I1T _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 4.000 _pdbx_phasing_MR.d_res_low_rotation 46.800 _pdbx_phasing_MR.d_res_high_translation 4.000 _pdbx_phasing_MR.d_res_low_translation 46.800 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 4 PHENIX 1.6.1_357 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 65 ? ? -149.65 24.95 2 1 GLN A 108 ? ? -36.97 -34.87 3 1 ASP A 168 ? ? -33.19 136.91 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id THR _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 81 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id O _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id THR _pdbx_unobs_or_zero_occ_atoms.label_seq_id 102 _pdbx_unobs_or_zero_occ_atoms.label_atom_id O # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -20 ? A MET 1 2 1 Y 1 A GLY -19 ? A GLY 2 3 1 Y 1 A SER -18 ? A SER 3 4 1 Y 1 A SER -17 ? A SER 4 5 1 Y 1 A HIS -16 ? A HIS 5 6 1 Y 1 A HIS -15 ? A HIS 6 7 1 Y 1 A HIS -14 ? A HIS 7 8 1 Y 1 A HIS -13 ? A HIS 8 9 1 Y 1 A HIS -12 ? A HIS 9 10 1 Y 1 A HIS -11 ? A HIS 10 11 1 Y 1 A SER -10 ? A SER 11 12 1 Y 1 A SER -9 ? A SER 12 13 1 Y 1 A GLY -8 ? A GLY 13 14 1 Y 1 A ARG -7 ? A ARG 14 15 1 Y 1 A GLU -6 ? A GLU 15 16 1 Y 1 A ASN -5 ? A ASN 16 17 1 Y 1 A LEU -4 ? A LEU 17 18 1 Y 1 A TYR -3 ? A TYR 18 19 1 Y 1 A PHE -2 ? A PHE 19 20 1 Y 1 A GLN -1 ? A GLN 20 21 1 Y 1 A GLY 0 ? A GLY 21 22 1 Y 1 A LEU 170 ? A LEU 191 23 1 Y 1 A ARG 171 ? A ARG 192 24 1 Y 1 A THR 172 ? A THR 193 25 1 Y 1 A SER 173 ? A SER 194 26 1 Y 1 A GLY 174 ? A GLY 195 27 1 Y 1 A GLU 175 ? A GLU 196 28 1 Y 1 A GLU 176 ? A GLU 197 29 1 Y 1 A VAL 177 ? A VAL 198 30 1 Y 1 A GLU 178 ? A GLU 199 31 1 Y 1 A GLU 179 ? A GLU 200 32 1 Y 1 A LEU 180 ? A LEU 201 33 1 Y 1 A GLU 181 ? A GLU 202 34 1 Y 1 A TYR 182 ? A TYR 203 35 1 Y 1 A GLU 183 ? A GLU 204 36 1 Y 1 A ARG 184 ? A ARG 205 37 1 Y 1 A LEU 185 ? A LEU 206 38 1 Y 1 A ILE 186 ? A ILE 207 39 1 Y 1 A SER 187 ? A SER 208 40 1 Y 1 A SER 188 ? A SER 209 41 1 Y 1 A LEU 189 ? A LEU 210 42 1 Y 1 A SER 190 ? A SER 211 43 1 Y 1 A SER 191 ? A SER 212 44 1 Y 1 A LEU 192 ? A LEU 213 45 1 Y 1 A GLU 193 ? A GLU 214 46 1 Y 1 A ASN 194 ? A ASN 215 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3JSB _pdbx_initial_refinement_model.details 'PDB ENTRY 3JSB' #