HEADER SUGAR BINDING PROTEIN 28-NOV-12 4I4U TITLE BEL BETA-TREFOIL COMPLEX WITH GALACTOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BEL BETA-TREFOIL; COMPND 3 CHAIN: A, B, C, D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOLETUS EDULIS; SOURCE 3 ORGANISM_COMMON: KING BOLETE MUSHROOM; SOURCE 4 ORGANISM_TAXID: 36056 KEYWDS LECTIN, FRUITING BODIES, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.BOVI,L.CENCI,M.PERDUCA,S.CAPALDI,M.E.CARRIZO,L.CIVIERO, AUTHOR 2 L.R.CHIARELLI,M.GALLIANO,H.L.MONACO REVDAT 3 20-SEP-23 4I4U 1 HETSYN REVDAT 2 29-JUL-20 4I4U 1 COMPND REMARK HETNAM SITE REVDAT 1 24-APR-13 4I4U 0 JRNL AUTH M.BOVI,L.CENCI,M.PERDUCA,S.CAPALDI,M.E.CARRIZO,L.CIVIERO, JRNL AUTH 2 L.R.CHIARELLI,M.GALLIANO,H.L.MONACO JRNL TITL BEL {BETA}-TREFOIL: A NOVEL LECTIN WITH ANTINEOPLASTIC JRNL TITL 2 PROPERTIES IN KING BOLETE (BOLETUS EDULIS) MUSHROOMS. JRNL REF GLYCOBIOLOGY V. 23 578 2013 JRNL REFN ISSN 0959-6658 JRNL PMID 23213111 JRNL DOI 10.1093/GLYCOB/CWS164 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 79300 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4200 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.57 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.61 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4892 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 277 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4755 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 112 REMARK 3 SOLVENT ATOMS : 605 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.371 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5042 ; 0.006 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6905 ; 1.151 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 590 ; 6.062 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 273 ;31.980 ;23.626 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 695 ; 9.876 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;15.857 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 731 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4033 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 146 REMARK 3 ORIGIN FOR THE GROUP (A): 17.2143 -1.3734 15.0776 REMARK 3 T TENSOR REMARK 3 T11: 0.0339 T22: 0.0058 REMARK 3 T33: 0.0061 T12: 0.0070 REMARK 3 T13: -0.0040 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.3951 L22: 0.2173 REMARK 3 L33: 0.3493 L12: -0.0177 REMARK 3 L13: 0.0059 L23: 0.0578 REMARK 3 S TENSOR REMARK 3 S11: 0.0333 S12: -0.0099 S13: -0.0010 REMARK 3 S21: -0.0159 S22: -0.0047 S23: -0.0225 REMARK 3 S31: 0.0387 S32: 0.0102 S33: -0.0286 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 146 REMARK 3 ORIGIN FOR THE GROUP (A): -12.5159 1.8414 17.7294 REMARK 3 T TENSOR REMARK 3 T11: 0.0218 T22: 0.0077 REMARK 3 T33: 0.0296 T12: -0.0071 REMARK 3 T13: 0.0114 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.5907 L22: 0.2109 REMARK 3 L33: 0.3318 L12: -0.1264 REMARK 3 L13: -0.0225 L23: -0.2231 REMARK 3 S TENSOR REMARK 3 S11: 0.0541 S12: -0.0061 S13: 0.0481 REMARK 3 S21: -0.0075 S22: 0.0147 S23: 0.0517 REMARK 3 S31: 0.0214 S32: -0.0275 S33: -0.0688 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 146 REMARK 3 ORIGIN FOR THE GROUP (A): -5.8544 35.8270 18.7349 REMARK 3 T TENSOR REMARK 3 T11: 0.0212 T22: 0.0165 REMARK 3 T33: 0.0167 T12: 0.0069 REMARK 3 T13: -0.0019 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 0.5910 L22: 0.1651 REMARK 3 L33: 0.4751 L12: -0.1478 REMARK 3 L13: -0.0611 L23: 0.0864 REMARK 3 S TENSOR REMARK 3 S11: 0.0015 S12: 0.0168 S13: 0.0096 REMARK 3 S21: 0.0036 S22: 0.0324 S23: 0.0329 REMARK 3 S31: 0.0071 S32: -0.0224 S33: -0.0339 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 146 REMARK 3 ORIGIN FOR THE GROUP (A): 23.9233 32.1643 20.0731 REMARK 3 T TENSOR REMARK 3 T11: 0.0177 T22: 0.0072 REMARK 3 T33: 0.0138 T12: 0.0041 REMARK 3 T13: -0.0061 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.6589 L22: 0.2065 REMARK 3 L33: 0.2827 L12: -0.0783 REMARK 3 L13: -0.0103 L23: 0.0424 REMARK 3 S TENSOR REMARK 3 S11: 0.0100 S12: 0.0105 S13: -0.0121 REMARK 3 S21: -0.0025 S22: -0.0128 S23: -0.0393 REMARK 3 S31: -0.0266 S32: 0.0022 S33: 0.0028 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT REMARK 3 U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 4I4U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000076305. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : DIAMOND(001) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 83522 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 27.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.27700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 4I4P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL, 0.2 M MAGNESIUM REMARK 280 CHLORIDE, 25% PEG4000, 0.2 M 1-BUTYL-3-METHYLIMIDAZOLIUM REMARK 280 CHLORIDE, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.00500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 5 63.13 -118.95 REMARK 500 ASN A 30 80.97 68.86 REMARK 500 THR A 123 -102.35 -96.81 REMARK 500 ASN B 5 60.08 -115.97 REMARK 500 ASN B 30 93.99 68.34 REMARK 500 THR B 123 -109.81 -77.70 REMARK 500 ASN C 30 94.07 67.75 REMARK 500 THR C 123 -102.56 -99.47 REMARK 500 ASN D 30 79.55 71.64 REMARK 500 THR D 123 -104.37 -95.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4I4O RELATED DB: PDB REMARK 900 RELATED ID: 4I4P RELATED DB: PDB REMARK 900 RELATED ID: 4I4Q RELATED DB: PDB REMARK 900 RELATED ID: 4I4R RELATED DB: PDB REMARK 900 RELATED ID: 4I4S RELATED DB: PDB REMARK 900 RELATED ID: 4I4V RELATED DB: PDB REMARK 900 RELATED ID: 4I4X RELATED DB: PDB REMARK 900 RELATED ID: 4I4Y RELATED DB: PDB DBREF 4I4U A 1 146 PDB 4I4U 4I4U 1 146 DBREF 4I4U B 1 146 PDB 4I4U 4I4U 1 146 DBREF 4I4U C 1 146 PDB 4I4U 4I4U 1 146 DBREF 4I4U D 1 146 PDB 4I4U 4I4U 1 146 SEQRES 1 A 146 VAL ASN PHE PRO ASN ILE PRO ALA GLU GLY VAL GLN PHE SEQRES 2 A 146 ARG LEU ARG ALA ARG ASP THR GLY TYR VAL ILE TYR SER SEQRES 3 A 146 ARG THR GLU ASN PRO PRO LEU VAL TRP GLN TYR ASN GLY SEQRES 4 A 146 PRO PRO TYR ASP ASP GLN LEU PHE THR LEU ILE TYR GLY SEQRES 5 A 146 THR GLY PRO ARG LYS ASN LEU TYR ALA ILE LYS SER VAL SEQRES 6 A 146 PRO ASN GLY ARG VAL LEU PHE SER ARG THR SER ALA SER SEQRES 7 A 146 PRO TYR VAL GLY ASN ILE ALA GLY ASP GLY THR TYR ASN SEQRES 8 A 146 ASP ASN TRP PHE GLN PHE ILE GLN ASP ASP ASN ASP PRO SEQRES 9 A 146 ASN SER PHE ARG ILE TYR ASN LEU ALA SER ASP THR VAL SEQRES 10 A 146 LEU TYR SER ARG THR THR ALA ASP PRO LYS PHE GLY ASN SEQRES 11 A 146 PHE THR GLY ALA LYS TYR ASP ASP GLN LEU TRP HIS PHE SEQRES 12 A 146 GLU LEU VAL SEQRES 1 B 146 VAL ASN PHE PRO ASN ILE PRO ALA GLU GLY VAL GLN PHE SEQRES 2 B 146 ARG LEU ARG ALA ARG ASP THR GLY TYR VAL ILE TYR SER SEQRES 3 B 146 ARG THR GLU ASN PRO PRO LEU VAL TRP GLN TYR ASN GLY SEQRES 4 B 146 PRO PRO TYR ASP ASP GLN LEU PHE THR LEU ILE TYR GLY SEQRES 5 B 146 THR GLY PRO ARG LYS ASN LEU TYR ALA ILE LYS SER VAL SEQRES 6 B 146 PRO ASN GLY ARG VAL LEU PHE SER ARG THR SER ALA SER SEQRES 7 B 146 PRO TYR VAL GLY ASN ILE ALA GLY ASP GLY THR TYR ASN SEQRES 8 B 146 ASP ASN TRP PHE GLN PHE ILE GLN ASP ASP ASN ASP PRO SEQRES 9 B 146 ASN SER PHE ARG ILE TYR ASN LEU ALA SER ASP THR VAL SEQRES 10 B 146 LEU TYR SER ARG THR THR ALA ASP PRO LYS PHE GLY ASN SEQRES 11 B 146 PHE THR GLY ALA LYS TYR ASP ASP GLN LEU TRP HIS PHE SEQRES 12 B 146 GLU LEU VAL SEQRES 1 C 146 VAL ASN PHE PRO ASN ILE PRO ALA GLU GLY VAL GLN PHE SEQRES 2 C 146 ARG LEU ARG ALA ARG ASP THR GLY TYR VAL ILE TYR SER SEQRES 3 C 146 ARG THR GLU ASN PRO PRO LEU VAL TRP GLN TYR ASN GLY SEQRES 4 C 146 PRO PRO TYR ASP ASP GLN LEU PHE THR LEU ILE TYR GLY SEQRES 5 C 146 THR GLY PRO ARG LYS ASN LEU TYR ALA ILE LYS SER VAL SEQRES 6 C 146 PRO ASN GLY ARG VAL LEU PHE SER ARG THR SER ALA SER SEQRES 7 C 146 PRO TYR VAL GLY ASN ILE ALA GLY ASP GLY THR TYR ASN SEQRES 8 C 146 ASP ASN TRP PHE GLN PHE ILE GLN ASP ASP ASN ASP PRO SEQRES 9 C 146 ASN SER PHE ARG ILE TYR ASN LEU ALA SER ASP THR VAL SEQRES 10 C 146 LEU TYR SER ARG THR THR ALA ASP PRO LYS PHE GLY ASN SEQRES 11 C 146 PHE THR GLY ALA LYS TYR ASP ASP GLN LEU TRP HIS PHE SEQRES 12 C 146 GLU LEU VAL SEQRES 1 D 146 VAL ASN PHE PRO ASN ILE PRO ALA GLU GLY VAL GLN PHE SEQRES 2 D 146 ARG LEU ARG ALA ARG ASP THR GLY TYR VAL ILE TYR SER SEQRES 3 D 146 ARG THR GLU ASN PRO PRO LEU VAL TRP GLN TYR ASN GLY SEQRES 4 D 146 PRO PRO TYR ASP ASP GLN LEU PHE THR LEU ILE TYR GLY SEQRES 5 D 146 THR GLY PRO ARG LYS ASN LEU TYR ALA ILE LYS SER VAL SEQRES 6 D 146 PRO ASN GLY ARG VAL LEU PHE SER ARG THR SER ALA SER SEQRES 7 D 146 PRO TYR VAL GLY ASN ILE ALA GLY ASP GLY THR TYR ASN SEQRES 8 D 146 ASP ASN TRP PHE GLN PHE ILE GLN ASP ASP ASN ASP PRO SEQRES 9 D 146 ASN SER PHE ARG ILE TYR ASN LEU ALA SER ASP THR VAL SEQRES 10 D 146 LEU TYR SER ARG THR THR ALA ASP PRO LYS PHE GLY ASN SEQRES 11 D 146 PHE THR GLY ALA LYS TYR ASP ASP GLN LEU TRP HIS PHE SEQRES 12 D 146 GLU LEU VAL HET GLA A 201 12 HET GLA A 202 12 HET GLA A 203 12 HET GLA B 201 12 HET GLA B 202 12 HET TRS B 203 8 HET TRS C 201 8 HET GLA D 201 12 HET GLA D 202 12 HET GLA D 203 12 HETNAM GLA ALPHA-D-GALACTOPYRANOSE HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN GLA ALPHA-D-GALACTOSE; D-GALACTOSE; GALACTOSE; ALPHA D- HETSYN 2 GLA GALACTOSE HETSYN TRS TRIS BUFFER FORMUL 5 GLA 8(C6 H12 O6) FORMUL 10 TRS 2(C4 H12 N O3 1+) FORMUL 15 HOH *605(H2 O) HELIX 1 1 TYR A 42 GLN A 45 5 4 HELIX 2 2 THR A 53 LYS A 57 5 5 HELIX 3 3 TYR A 90 ASN A 93 5 4 HELIX 4 4 TYR A 136 GLN A 139 5 4 HELIX 5 5 TYR B 42 GLN B 45 5 4 HELIX 6 6 THR B 53 LYS B 57 5 5 HELIX 7 7 TYR B 90 ASN B 93 5 4 HELIX 8 8 TYR B 136 GLN B 139 5 4 HELIX 9 9 TYR C 42 GLN C 45 5 4 HELIX 10 10 THR C 53 LYS C 57 5 5 HELIX 11 11 TYR C 90 ASN C 93 5 4 HELIX 12 12 TYR C 136 GLN C 139 5 4 HELIX 13 13 TYR D 42 GLN D 45 5 4 HELIX 14 14 THR D 53 LYS D 57 5 5 HELIX 15 15 TYR D 90 ASN D 93 5 4 HELIX 16 16 TYR D 136 GLN D 139 5 4 SHEET 1 A 2 PHE A 13 ALA A 17 0 SHEET 2 A 2 TRP A 141 LEU A 145 -1 O GLU A 144 N ARG A 14 SHEET 1 B 2 VAL A 23 SER A 26 0 SHEET 2 B 2 VAL A 34 TYR A 37 -1 O TRP A 35 N TYR A 25 SHEET 1 C 2 PHE A 47 TYR A 51 0 SHEET 2 C 2 TYR A 60 SER A 64 -1 O LYS A 63 N THR A 48 SHEET 1 D 2 VAL A 70 SER A 73 0 SHEET 2 D 2 VAL A 81 ILE A 84 -1 O ILE A 84 N VAL A 70 SHEET 1 E 4 PHE A 95 GLN A 99 0 SHEET 2 E 4 PHE A 107 ASN A 111 -1 O TYR A 110 N GLN A 96 SHEET 3 E 4 THR A 116 SER A 120 -1 O THR A 116 N ASN A 111 SHEET 4 E 4 PHE A 128 PHE A 131 -1 O GLY A 129 N TYR A 119 SHEET 1 F 2 PHE B 13 ALA B 17 0 SHEET 2 F 2 TRP B 141 LEU B 145 -1 O GLU B 144 N ARG B 14 SHEET 1 G 2 VAL B 23 SER B 26 0 SHEET 2 G 2 VAL B 34 TYR B 37 -1 O TYR B 37 N VAL B 23 SHEET 1 H 2 PHE B 47 TYR B 51 0 SHEET 2 H 2 TYR B 60 SER B 64 -1 O LYS B 63 N THR B 48 SHEET 1 I 2 VAL B 70 SER B 73 0 SHEET 2 I 2 VAL B 81 ILE B 84 -1 O ILE B 84 N VAL B 70 SHEET 1 J 4 PHE B 95 GLN B 99 0 SHEET 2 J 4 PHE B 107 ASN B 111 -1 O TYR B 110 N GLN B 96 SHEET 3 J 4 THR B 116 SER B 120 -1 O THR B 116 N ASN B 111 SHEET 4 J 4 PHE B 128 PHE B 131 -1 O GLY B 129 N TYR B 119 SHEET 1 K 2 PHE C 13 ALA C 17 0 SHEET 2 K 2 TRP C 141 LEU C 145 -1 O GLU C 144 N ARG C 14 SHEET 1 L 2 VAL C 23 SER C 26 0 SHEET 2 L 2 VAL C 34 TYR C 37 -1 O TYR C 37 N VAL C 23 SHEET 1 M 2 PHE C 47 TYR C 51 0 SHEET 2 M 2 TYR C 60 SER C 64 -1 O LYS C 63 N THR C 48 SHEET 1 N 2 VAL C 70 SER C 73 0 SHEET 2 N 2 VAL C 81 ILE C 84 -1 O ILE C 84 N VAL C 70 SHEET 1 O 4 PHE C 95 GLN C 99 0 SHEET 2 O 4 PHE C 107 ASN C 111 -1 O TYR C 110 N GLN C 96 SHEET 3 O 4 THR C 116 SER C 120 -1 O THR C 116 N ASN C 111 SHEET 4 O 4 PHE C 128 PHE C 131 -1 O GLY C 129 N TYR C 119 SHEET 1 P 2 PHE D 13 ALA D 17 0 SHEET 2 P 2 TRP D 141 LEU D 145 -1 O GLU D 144 N ARG D 14 SHEET 1 Q 2 VAL D 23 SER D 26 0 SHEET 2 Q 2 VAL D 34 TYR D 37 -1 O TYR D 37 N VAL D 23 SHEET 1 R 2 PHE D 47 TYR D 51 0 SHEET 2 R 2 TYR D 60 SER D 64 -1 O LYS D 63 N THR D 48 SHEET 1 S 2 VAL D 70 SER D 73 0 SHEET 2 S 2 VAL D 81 ILE D 84 -1 O ILE D 84 N VAL D 70 SHEET 1 T 4 PHE D 95 GLN D 99 0 SHEET 2 T 4 PHE D 107 ASN D 111 -1 O TYR D 110 N GLN D 96 SHEET 3 T 4 THR D 116 SER D 120 -1 O THR D 116 N ASN D 111 SHEET 4 T 4 PHE D 128 PHE D 131 -1 O GLY D 129 N TYR D 119 CISPEP 1 PRO A 31 PRO A 32 0 2.22 CISPEP 2 SER A 78 PRO A 79 0 -4.06 CISPEP 3 ASP A 125 PRO A 126 0 -4.28 CISPEP 4 PRO B 31 PRO B 32 0 0.63 CISPEP 5 SER B 78 PRO B 79 0 -1.25 CISPEP 6 ASP B 125 PRO B 126 0 -2.42 CISPEP 7 PRO C 31 PRO C 32 0 -0.95 CISPEP 8 SER C 78 PRO C 79 0 -2.85 CISPEP 9 ASP C 125 PRO C 126 0 -6.06 CISPEP 10 PRO D 31 PRO D 32 0 1.86 CISPEP 11 SER D 78 PRO D 79 0 -0.20 CISPEP 12 ASP D 125 PRO D 126 0 -3.82 CRYST1 66.400 70.010 71.630 90.00 106.57 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015060 0.000000 0.004481 0.00000 SCALE2 0.000000 0.014284 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014566 0.00000